Pregenerated sensors for RADX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042498Ensembl transcript IDs: ENSMUST00000046763.13, ENSMUST00000113030.3
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTATACCTCAAGTACAATCAGACCTGTGTTTATAAATGTAGAGTaGCCATTTACCTTGAAAACACAGTATAGTAAGTGGAGAACCAGA | + |
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Preference number: 1 (lower is better) Translates to: SYTSSTIRPVFINVE*PFTLKTQYSKWRTR Trigger: TCTGGTTCTCCACTTACTATACTGTGTTTTCAAGGTAAATGGTCACTCTACATTTATAAACACAGGTCTGATTGTACTTGAGGTATAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| 3UTR-3UTR TCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTGTGCCAAATACAAGATaGACTGAAAACCACTTAACT | + |
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Preference number: 2 (lower is better) Translates to: NWITTIHVCVDMTGTTWIVPNTR*TENHLT Trigger: AGTTAAGTGGTTTTCAGTTCATCTTGTATTTGGCAC...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| 3UTR-3UTR TCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTGTGCCAAATACAAGATaGACTGAAAACCACTTAACT | + |
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Preference number: 2 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTVPNTR*TENHLT Trigger: AGTTAAGTGGTTTTCAGTTCATCTTGTATTTGGCAC...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| 3UTR-3UTR CAA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTCAGAAAGCTGTTAAATaGTGTAAGCCAAGACACACT | + |
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Preference number: 3 (lower is better) Translates to: NWITTIHVCVDMTGTTWIQKAVK*CKPRHT Trigger: AGTGTGTCTTGGCTTACACAATTTAACAGCTTTCTG...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| 3UTR GCA 72 bp | TTTTATGACAGTTCAGCATATTCACTTAATAGCAAATaGAGGGAGACTGGGGCAATTGGATCACTACAATCC | + |
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Preference number: 3 (lower is better) Translates to: FYDSSAYSLNSK*RETGAIGSLQS Trigger: GGATTGTAGTGATCCAATTGCCCCAGTCTCCCTGCATTTGCTATTAAGTGAATATGCTGAACTGTCATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGCCTGGGACCCCAGCCTaGTCCCTTTCGGGGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWPGTPA*SLSGCS Trigger: GGAGCACCCCGAAAGGGATCAGGCTGGGGTCCCAGG...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGCCTGGGACCCCAGCCTaGTCCCTTTCGGGGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLPGTPA*SLSGCS Trigger: GGAGCACCCCGAAAGGGATCAGGCTGGGGTCCCAGG...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTTCGTATCACTCCACCTaGGACCCCAGCCTGATCCCT | + |
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Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWISYHST*DPSLIP Trigger: AGGGATCAGGCTGGGGTCCCAGGTGGAGTGATACGA...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGATTCCACAGAATCACTaGCACCATGCCCGAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWIPQNH*HHARAV Trigger: GACAGCTCGGGCATGGTGTCAGTGATTCTGTGGAAT...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGAGGGACTCCCCACAGTaGACCTTATCTATGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWRDSPQ*TLSMHR Trigger: CCTGTGCATAGATAAGGTCCACTGTGGGGAGTCCCT...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTCACCTGCAACTGCCTTaGGATCTGGCAACCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWIHLQLP*DLATFH Trigger: GTGGAAGGTTGCCAGATCCCAAGGCAGTTGCAGGTG...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGCTGGTACACCCCGTCTaGGATTGTCACATCATAGCA | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWLVHPV*DCHIIA Trigger: TGCTATGATGTGACAATCTCAGACGGGGTGTACCAG...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGCTGAAGTCCCATCAGTaGTGTGAATCCAGCGGTATG | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWLKSHQ*CESSGM Trigger: CATACCGCTGGATTCACATCACTGATGGGACTTCAG...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTAGGCTTCGGGCGCTCTaGAATTCATCAAGTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWIRLRAL*NSSSLG Trigger: CCCCAAACTTGATGAATTTCAGAGCGCCCGAAGCCT...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTCTGGCAACCTTCCACTaGGAGGTGCTGCTGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTLATFH*EVLLVD Trigger: ATCCACCAGCAGCACCTCTCAGTGGAAGGTTGCCAG...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR GCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGGCTTCCTTTCATCTGTaGAGAAGAATGCGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWASFHL*RRMRLR Trigger: CCTCAGCCGCATTCTTCTGCACAGATGAAAGGAAGC...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTATCGTATCACTCCACCTaGGACCCCAGCCTGATCCCT | + |
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Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVSYHST*DPSLIP Trigger: AGGGATCAGGCTGGGGTCCCAGGTGGAGTGATACGA...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGAGTAAAGGGGAGGCTTaGGCACTGTATCCCGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLSKGEA*ALYPVA Trigger: AGCCACGGGATACAGTGCCCAAGCCTCCCCTTTACT...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGATTCCACAGAATCACTaGCACCATGCCCGAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLIPQNH*HHARAV Trigger: GACAGCTCGGGCATGGTGTCAGTGATTCTGTGGAAT...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR GCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTATTTGGATCCAGGACCTaGGCCTCTGGCTATCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVFGSRT*ASGYQL Trigger: GAGCTGATAGCCAGAGGCGCAGGTCCTGGATCCAAA...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR GCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTGCTTCCTTTCATCTGTaGAGAAGAATGCGGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWIASFHL*RRMRLR Trigger: CCTCAGCCGCATTCTTCTGCACAGATGAAAGGAAGC...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTTGCTCAATAACCTTTTaGATCCAGGACCTGCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWICSITF*IQDLRL Trigger: GAGGCGCAGGTCCTGGATCCAAAAGGTTATTGAGCA...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGATGCACAGGATTCCCTaGCCCAATCTTTTCTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWMHRIP*PNLFSL Trigger: CAACGAGAAAAGATTGGGCCAGGGAATCCTGTGCAT...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTTGTCTCTGGCACTGGTaGATAGGGGTAATATCCACC | + |
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Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWICLWHW*IGVIST Trigger: GGTGGATATTACCCCTATCCACCAGTGCCAGAGACA...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGCTTGGAAAATGTCTCTaGCACTGGTGGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWLGKCL*HWWIGV Trigger: TACCCCTATCCACCAGTGCCAGAGACATTTTCCAAG...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTCACCTGCAACTGCCTTaGGATCTGGCAACCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTHLQLP*DLATFH Trigger: GTGGAAGGTTGCCAGATCCCAAGGCAGTTGCAGGTG...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGCTGAAGTCCCATCAGTaGTGTGAATCCAGCGGTATG | + |
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Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLLKSHQ*CESSGM Trigger: CATACCGCTGGATTCACATCACTGATGGGACTTCAG...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTATGAATGGTTGCTCTaGAGTCCCATCAGTGATGTG | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWYEWLL*SPISDV Trigger: CACATCACTGATGGGACTTCAGAGCAACCATTCATA...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTAGAACAGCTGCACTATaGATGGTTGCTCTGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWIRTAAL*MVALKS Trigger: GGACTTCAGAGCAACCATTCATAGTGCAGCTGTTCT...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTAGGCTTCGGGCGCTCTaGAATTCATCAAGTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTRLRAL*NSSSLG Trigger: CCCCAAACTTGATGAATTTCAGAGCGCCCGAAGCCT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR GCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGAGTGGACCTTATCTATaGACAGGATTCCCTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLSGPYL*TGFPGP Trigger: TGGGCCAGGGAATCCTGTGCATAGATAAGGTCCACT...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR GCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTACCAGGTAGTGACTCTTaGCCCCTCTTAAAGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVPGSDS*PLLKAS Trigger: AGAGGCCTTTAAGAGGGGGCAAGAGTCACTACCTGG...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR GCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTCAAAGACTTCTGGCTaGGATGTGGAGAACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLSKTSG*DVENSC Trigger: GCAGCTGTTCTCCACATCGCAGCCAGAAGTCTTTGA...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR GCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTAATATCACCTGCAACTaGCTTGGGATCTGGCAACCT | + |
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Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWINITCN*LGIWQP Trigger: AGGTTGCCAGATCCCAAGGCAGTTGCAGGTGATATT...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR GCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATCCAGGTCAGCTGCTaGCTTTACAATATCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWIIQVSC*LYNITC Trigger: GCAGGTGATATTGTAAAGGCAGCAGCTGACCTGGAT...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTAGGGACTCCCCACAGTaGACCTTATCTATGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTRDSPQ*TLSMHR Trigger: CCTGTGCATAGATAAGGTCCACTGTGGGGAGTCCCT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTGTCTCTGGCACTGGTaGATAGGGGTAATATCCACC | + |
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Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLCLWHW*IGVIST Trigger: GGTGGATATTACCCCTATCCACCAGTGCCAGAGACA...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR CCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGAAATGTCTCTGGCACTaGTGGATAGGGGTAATATCC | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWKCLWH*WIGVIS Trigger: GGATATTACCCCTATCCACCAGTGCCAGAGACATTT...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTACTGGTACACCCCGTCTaGGATTGTCACATCATAGCA | + |
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Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVLVHPV*DCHIIA Trigger: TGCTATGATGTGACAATCTCAGACGGGGTGTACCAG...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTGTTCTCTTTCTTCTTTaGCCGTTGCACCCTCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTVLFLL*PLHPPY Trigger: GTAGGGAGGGTGCAACGGTCAAAGAAGAAAGAGAAC...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGTTCTCTTTCTTCTTTaGCCGTTGCACCCTCCCTAC | + |
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Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVVLFLL*PLHPPY Trigger: GTAGGGAGGGTGCAACGGTCAAAGAAGAAAGAGAAC...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGGCAGTAATTATCCCCTaGATTGCAATGCGCTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWAVIIP*IAMRFC Trigger: ACAAAAGCGCATTGCAATTCAGGGGATAATTACTGC...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR TCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGGCAGTTGAACTTTCTTaGCTTGGTGTGTTGTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWAVELS*LGVLCL Trigger: CAAACACAACACACCAAGTCAAGAAAGTTCAACTGC...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS-3UTR GCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTTCATCTGTGGATCTaGAGGGTCAGGCTGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLFHLWI*RVRLDS Trigger: AGAATCCAGCCTGACCCTGCAGATCCACAGATGAAA...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTGATGTGGAGAACAGCTaGACTATGAATGGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWIDVENS*TMNGCS Trigger: AGAGCAACCATTCATAGTGCAGCTGTTCTCCACATC...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTTATGGCAGGCCTCTATaGCCAGTAGTAAGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTYGRPL*PVVSAL Trigger: CAGAGCACTTACTACTGGGCATAGAGGCCTGCCATA...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046763.13 |
||
| CDS-3UTR GCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTTGGTGTGTTGTGTTTaGTTCCTTTCATCTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWLVCCV*FLSSVQ Trigger: CTGCACAGATGAAAGGAAGCAAACACAACACACCAA...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGAATATCACCTGCAACTaGCTTGGGATCTGGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLNITCN*LGIWQP Trigger: AGGTTGCCAGATCCCAAGGCAGTTGCAGGTGATATT...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTATATGGCAGGCCTCTATaGCCTCCAGTAGTAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVYGRPL*PPVVSA Trigger: AGCACTTACTACTGGAGGGCATAGAGGCCTGCCATA...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTTGCTCAATAACCTTTTaGATCCAGGACCTGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTCSITF*IQDLRL Trigger: GAGGCGCAGGTCCTGGATCCAAAAGGTTATTGAGCA...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTCCTCAGGTTGCTTGTTaGTCTTCCAAATATCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWIPQVAC*SSKYLR Trigger: ACGGAGATATTTGGAAGACCAACAAGCAACCTGAGG...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTATGCTGAGACCCCATTaGTCTGTCATCTTGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTMLRPH*SVILGP Trigger: AGGTCCCAAGATGACAGACCAATGGGGTCTCAGCAT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTGAGTTTCTACAGAAATaGCATCTAGGGACTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTEFLQK*HLGTPH Trigger: GTGGGGAGTCCCTAGATGTCATTTCTGTAGAAACTC...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTAGAACAGCTGCACTATaGATGGTTGCTCTGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTRTAAL*MVALKS Trigger: GGACTTCAGAGCAACCATTCATAGTGCAGCTGTTCT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGCGCAGTTTTGATTTATaGAGGACTCTTACAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWRSFDL*RTLTSK Trigger: CTTGCTTGTAAGAGTCCTGCATAAATCAAAACTGCG...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTTTTCATCTGTGGATCTaGAGGGTCAGGCTGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTFHLWI*RVRLDS Trigger: AGAATCCAGCCTGACCCTGCAGATCCACAGATGAAA...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAATCCAGGTCAGCTGCTaGCTTTACAATATCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVIQVSC*LYNITC Trigger: GCAGGTGATATTGTAAAGGCAGCAGCTGACCTGGAT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTACTTTTATACCACTCTaGACACAGAGCATTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWITFIPL*TQSIPQ Trigger: CTGTGGAATGCTCTGTGTCCAGAGTGGTATAAAAGT...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTCTTGGAAAATGTCTCTaGCACTGGTGGATAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTLGKCL*HWWIGV Trigger: TACCCCTATCCACCAGTGCCAGAGACATTTTCCAAG...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGTGAATCCAGCGGTATaGCCAAAAGTCTTCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVVNPAV*PKVFTV Trigger: AACAGTGAAGACTTTTGGTCATACCGCTGGATTCAC...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTATATGAATGGTTGCTCTaGAGTCCCATCAGTGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVYEWLL*SPISDV Trigger: CACATCACTGATGGGACTTCAGAGCAACCATTCATA...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGGCAGTTGAACTTTCTTaGCTTGGTGTGTTGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLAVELS*LGVLCL Trigger: CAAACACAACACACCAAGTCAAGAAAGTTCAACTGC...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTGGGGAACCTGTTATTTaGTCAATAACCTTTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWIGEPVI*SITFWI Trigger: GATCCAAAAGGTTATTGAGCAAATAACAGGTTCCCC...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTTGAATTCCTCAGGTTaGTTGTTGGTCTTCCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWLNSSG*LLVFQI Trigger: TATTTGGAAGACCAACAAGCAACCTGAGGAATTCAA...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTTTTGTTCCCTATACTaGAAGTCTTCAATCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWFCSLY*KSSITF Trigger: GAAGGTGATTGAAGACTTGCAGTATAGGGAACAAAA...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTCCCCTGAATTGCAATaGGCTTTTGTTCCCTATACT | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLSPELQ*AFVPYT Trigger: AGTATAGGGAACAAAAGCGCATTGCAATTCAGGGGA...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTAATTATCCCCTGAATTaGAATGCGCTTTTGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWINYPLN*NALLFP Trigger: AGGGAACAAAAGCGCATTGCAATTCAGGGGATAATT...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTGGTGTGTTGTGTTTaGTTCCTTTCATCTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLLVCCV*FLSSVQ Trigger: CTGCACAGATGAAAGGAAGCAAACACAACACACCAA...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGAAAGGCACGAGACTCTaGAAATTCTCATCTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLKGTRL*KFSSLC Trigger: GCATAGAGATGAGAATTTCCAGAGTCTCGTGCCTTT...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGCGCTCTGTTTCTAAATaGAGTTTCTACAGAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWRSVSK*SFYRND Trigger: GTCATTTCTGTAGAAACTCCATTTAGAAACAGAGCG...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTACCTCAGGTTGCTTGTTaGTCTTCCAAATATCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVPQVAC*SSKYLR Trigger: ACGGAGATATTTGGAAGACCAACAAGCAACCTGAGG...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGATTTTCAAAGACTTCTaGCTGCGATGTGGAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLIFKDF*LRCGEQ Trigger: CTGTTCTCCACATCGCAGCCAGAAGTCTTTGAAAAT...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAAAATGTCTCTGGCACTaGTGGATAGGGGTAATATCC | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVKCLWH*WIGVIS Trigger: GGATATTACCCCTATCCACCAGTGCCAGAGACATTT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTTTCTGGACTTCCCTGTaGTATAAGCAGTTGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWIFWTSL*YKQLNF Trigger: AAAGTTCAACTGCTTATACCACAGGGAAGTCCAGAA...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAGTATCGCAGTTTTaGTTTATGCAGGACTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NWITTIHVCVDMTGTTWIIVSQF*FMQDSY Trigger: GTAAGAGTCCTGCATAAATCAAAACTGCGATACTAT...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGCAGTAATTATCCCCTaGATTGCAATGCGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVAVIIP*IAMRFC Trigger: ACAAAAGCGCATTGCAATTCAGGGGATAATTACTGC...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTATATCCAAGATACCAATaGTGTGGACTCTATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVYPRYQ*CGLYPG Trigger: ACCTGGATAGAGTCCACATCATTGGTATCTTGGATA...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGGGGGAACCTGTTATTTaGTCAATAACCTTTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLGEPVI*SITFWI Trigger: GATCCAAAAGGTTATTGAGCAAATAACAGGTTCCCC...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGATGCCCAGTAGTAAGTaGTCTGCTTTCATTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLMPSSK*SAFICS Trigger: ACTACAAATGAAAGCAGAGCACTTACTACTGGGCAT...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046763.13 |
||
| CDS-3UTR GCA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGAATAACCGTGTTCTTTaGTTCCAAATTAGTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWNNRVL*FQISLR Trigger: ACGAAGACTAATTTGGAAGCAAAGAACACGGTTATT...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTATCCCCTGAATTGCAATaGGCTTTTGTTCCCTATACT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVSPELQ*AFVPYT Trigger: AGTATAGGGAACAAAAGCGCATTGCAATTCAGGGGA...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTCCCTCCAGTAGTAAGTaGTCTGCTTTCATTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTPSSSK*SAFICS Trigger: ACTACAAATGAAAGCAGAGCACTTACTACTGGAGGG...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTACGAGAAAGTTTAAGCTaGGGTCTAAGTAGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVRESLS*GLSSTS Trigger: AGAAGTGCTACTTAGACCCCAGCTTAAACTTTCTCG...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTCGAGAAAGTTTAAGCTaGGGTCTAAGTAGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTRESLS*GLSSTS Trigger: AGAAGTGCTACTTAGACCCCAGCTTAAACTTTCTCG...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTAAAGGCACGAGACTCTaGAAATTCTCATCTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTKGTRL*KFSSLC Trigger: GCATAGAGATGAGAATTTCCAGAGTCTCGTGCCTTT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAACTTTTATACCACTCTaGACACAGAGCATTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVTFIPL*TQSIPQ Trigger: CTGTGGAATGCTCTGTGTCCAGAGTGGTATAAAAGT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTATTTTCAAAGACTTCTaGCTGCGATGTGGAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTIFKDF*LRCGEQ Trigger: CTGTTCTCCACATCGCAGCCAGAAGTCTTTGAAAAT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGCTAACGACTTTCAACTaGGTGCACACAAAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLLTTFN*VHTKYV Trigger: GACATATTTTGTGTGCACCCAGTTGAAAGTCGTTAG...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTATTGGTCTGTCATCTTaGGACCTTTTACTACCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTIGLSS*DLLLPR Trigger: ACGAGGTAGTAAAAGGTCCCAAGATGACAGACCAAT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAATTGGTCTGTCATCTTaGGACCTTTTACTACCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVIGLSS*DLLLPR Trigger: ACGAGGTAGTAAAAGGTCCCAAGATGACAGACCAAT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGAACCGGATTAGCACTTaGGCCTTGAAGAATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLNRIST*ALKNFS Trigger: AGAAAAATTCTTCAAGGCCCAAGTGCTAATCCGGTT...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAAAGATACCAATGATGTaGACTCTATCCAGGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVKIPMM*TLSRSA Trigger: AGCTGACCTGGATAGAGTCCACATCATTGGTATCTT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTTCTATTTGCGATGCTTaGACATCTTCTGGAGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTSICDA*TSSGEY Trigger: GTATTCTCCAGAAGATGTTCAAGCATCGCAAATAGA...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTATCTATTTGCGATGCTTaGACATCTTCTGGAGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVSICDA*TSSGEY Trigger: GTATTCTCCAGAAGATGTTCAAGCATCGCAAATAGA...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTACGCAGTTTTGATTTATaGAGGACTCTTACAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVRSFDL*RTLTSK Trigger: CTTGCTTGTAAGAGTCCTGCATAAATCAAAACTGCG...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTAATTATCCCCTGAATTaGAATGCGCTTTTGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTNYPLN*NALLFP Trigger: AGGGAACAAAAGCGCATTGCAATTCAGGGGATAATT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTAACTATGTTAGTTGGTaGATCTCGAAGATTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTNYVSW*ISKIQA Trigger: TGCCTGAATCTTCGAGATCCACCAACTAACATAGTT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAAACTATGTTAGTTGGTaGATCTCGAAGATTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVNYVSW*ISKIQA Trigger: TGCCTGAATCTTCGAGATCCACCAACTAACATAGTT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTCTAACGACTTTCAACTaGGTGCACACAAAATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTLTTFN*VHTKYV Trigger: GACATATTTTGTGTGCACCCAGTTGAAAGTCGTTAG...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAAACCGGATTAGCACTTaGGCCTTGAAGAATTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVNRIST*ALKNFS Trigger: AGAAAAATTCTTCAAGGCCCAAGTGCTAATCCGGTT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGGGTTCAAACCTAGGATaGTTACTTCAAAATGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLGSNLG*LLQNVQ Trigger: TTGGACATTTTGAAGTAACCATCCTAGGTTTGAACC...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTATAGTATCGCAGTTTTaGTTTATGCAGGACTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTIVSQF*FMQDSY Trigger: GTAAGAGTCCTGCATAAATCAAAACTGCGATACTAT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTATATTGTTGTCAAGAGTaGCTCAGCTTTAATAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVYCCQE*LSFNKA Trigger: CGCTTTATTAAAGCTGAGTCACTCTTGACAACAATA...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR TCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTATTAGCACTTGGGCCTTaGAGAATTTTTCTTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVLALGP*RIFLFA Trigger: TGCAAAAAGAAAAATTCTTCAAGGCCCAAGTGCTAA...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGCAGGAAAATTCTTTCTaGTATTCCAAGTCAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLQENSF*YSKSTQ Trigger: TTGAGTTGACTTGGAATAGCAGAAAGAATTTTCCTG...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTTTTTGTTCCCTATACTaGAAGTCTTCAATCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTFCSLY*KSSITF Trigger: GAAGGTGATTGAAGACTTGCAGTATAGGGAACAAAA...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGAGAGACTCAAAACCTTaGAGGTATATTGAAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLRDSKP*RYIENA Trigger: AGCATTTTCAATATACCTCCAAGGTTTTGAGTCTCT...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTCAGGAAAATTCTTTCTaGTATTCCAAGTCAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTQENSF*YSKSTQ Trigger: TTGAGTTGACTTGGAATAGCAGAAAGAATTTTCCTG...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR GCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAAATAACCGTGTTCTTTaGTTCCAAATTAGTCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVNNRVL*FQISLR Trigger: ACGAAGACTAATTTGGAAGCAAAGAACACGGTTATT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CCA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAAGAGACTCAAAACCTTaGAGGTATATTGAAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVRDSKP*RYIENA Trigger: AGCATTTTCAATATACCTCCAAGGTTTTGAGTCTCT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 90 bp | CCAGGACCTGCGCCTCTGGCTATCAGCTCTTCGTATCACTCCACCTaGGACCCCAGCCTGATCCCTTTCGGGGTGCTCCAAGTAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PGPAPLAISSSYHST*DPSLIPFGVLQVET Trigger: GGTCTCTACTTGGAGCACCCCGAAAGGGATCAGGCTGGGGTCCCAGGTGGAGTGATACGAAGAGCTGATAGCCAGAGGCGCAGGTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 90 bp | GGCTTGGGCACTGTATCCCGTGGCTCATCCTCTAAAAGGTATCTTTaGACAGCCAGTACAGTGACAGGCACCACTTCCGAGAGGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: GLGTVSRGSSSKRYL*TASTVTGTTSERVT Trigger: TGTCACCCTCTCGGAAGTGGTGCCTGTCACTGTACTGGCTGTCCAAAGATACCTTTTAGAGGATGAGCCACGGGATACAGTGCCCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS GCA 90 bp | CTCCGTACGGATCTTCGTTATTCCACAGAGCCAGGTAGTGACTCTTaGCCCCTCTTAAAGGCCTCTCTGGCTTTTCCTCATGCGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRTDLRYSTEPGSDS*PLLKASLAFPHALC Trigger: ACAGAGCGCATGAGGAAAAGCCAGAGAGGCCTTTAAGAGGGGGCAAGAGTCACTACCTGGCTCTGTGGAATAACGAAGATCCGTACGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS GCA 90 bp | GATGTGGACTCTATCCAGGTCAGCTGCTGCCTTTACAATATCACCTaGAACTGCCTTGGGATCTGGCAACCTTCCACTGAGAGGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DVDSIQVSCCLYNIT*NCLGIWQPSTERCC Trigger: GCAGCACCTCTCAGTGGAAGGTTGCCAGATCCCAAGGCAGTTGCAGGTGATATTGTAAAGGCAGCAGCTGACCTGGATAGAGTCCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 90 bp | ACCACTTCCGAGAGGGTGACACACTGTCTAGGGGAACCTGTTATTTaGTCAATAACCTTTTGGATCCAGGACCTGCGCCTCTGGCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: TTSERVTHCLGEPVI*SITFWIQDLRLWLS Trigger: TGATAGCCAGAGGCGCAGGTCCTGGATCCAAAAGGTTATTGAGCAAATAACAGGTTCCCCTAGACAGTGTGTCACCCTCTCGGAAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 90 bp | TATACCACTCTGGACACAGAGCATTCCACAGAATCACTGACACCATaGCCGAGCTGTCAGCAACCTCCAAATAGGTCTGATATGGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YTTLDTEHSTESLTP*PSCQQPPNRSDMAQ Trigger: TTGAGCCATATCAGACCTATTTGGAGGTTGCTGACAGCTCGGGCATGGTGTCAGTGATTCTGTGGAATGCTCTGTGTCCAGAGTGGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 90 bp | GATATCCAAGATACCAATGATGTGGACTCTATCCAGGTCAGCTGCTaGCTTTACAATATCACCTGCAACTGCCTTGGGATCTGGCAACCT | + |
|
Preference number: 5 (lower is better) Translates to: DIQDTNDVDSIQVSC*LYNITCNCLGIWQP Trigger: AGGTTGCCAGATCCCAAGGCAGTTGCAGGTGATATTGTAAAGGCAGCAGCTGACCTGGATAGAGTCCACATCATTGGTATCTTGGATATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 90 bp | CTAAATGGAGTTTCTACAGAAATGACATCTAGGGACTCCCCACAGTaGACCTTATCTATGCACAGGATTCCCTGGCCCAATCTTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LNGVSTEMTSRDSPQ*TLSMHRIPWPNLFS Trigger: CGAGAAAAGATTGGGCCAGGGAATCCTGTGCATAGATAAGGTCCACTGTGGGGAGTCCCTAGATGTCATTTCTGTAGAAACTCCATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTGTTCTCTTTCTTCTTaGACCGTTGCACCCTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWCSLSS*TVAPSL Trigger: TAGGGAGGGTGCAACGGTCAAAGAAGAAAGAGAACA...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGCATTGGTCTGTCATCTaGGGACCTTTTACTACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWHWSVI*GPFTTS Trigger: CGAGGTAGTAAAAGGTCCCAAGATGACAGACCAATG...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS TCA 90 bp | AACAGCTGCACTATGAATGGTTGCTCTGAAGTCCCATCAGTGATGTaGATCCAGCGGTATGACCAAAAGTCTTCACTGTTCTCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSCTMNGCSEVPSVM*IQRYDQKSSLFSFF Trigger: GAAGAAAGAGAACAGTGAAGACTTTTGGTCATACCGCTGGATTCACATCACTGATGGGACTTCAGAGCAACCATTCATAGTGCAGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 90 bp | CTGTGGTATAAGCAGTTGAACTTTCTTGACTTGGTGTGTTGTGTTTaGTTCCTTTCATCTGTGCAGAAGAATGCGGCTGAGGAACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LWYKQLNFLDLVCCV*FLSSVQKNAAEEQE Trigger: TTCCTGTTCCTCAGCCGCATTCTTCTGCACAGATGAAAGGAAGCAAACACAACACACCAAGTCAAGAAAGTTCAACTGCTTATACCACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 90 bp | GGTATCGTATGTATATGGCAGGCCTCTATGCCCTCCAGTAGTAAGTaGTCTGCTTTCATTTGTAGTGGTAAGATAAAGCAGCTTAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GIVCIWQASMPSSSK*SAFICSGKIKQLRY Trigger: GTACCTAAGCTGCTTTATCTTACCACTACAAATGAAAGCAGAGCACTTACTACTGGAGGGCATAGAGGCCTGCCATATACATACGATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTGCTCAATAACCTTTaGGATCCAGGACCTGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLLLNNL*DPGPAP Trigger: AGGCGCAGGTCCTGGATCCAAAAGGTTATTGAGCAA...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGACACCCCGTCTGAGATaGTCACATCATAGCAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWTPRLR*SHHSSK Trigger: TTTACTGCTATGATGTGACAATCTCAGACGGGGTGT...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTTGTTCTCTTTCTTCTTaGACCGTTGCACCCTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: NWITTIHVCVDMTGTTWICSLSS*TVAPSL Trigger: TAGGGAGGGTGCAACGGTCAAAGAAGAAAGAGAACA...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTCATTGGTCTGTCATCTaGGGACCTTTTACTACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NWITTIHVCVDMTGTTWIHWSVI*GPFTTS Trigger: CGAGGTAGTAAAAGGTCCCAAGATGACAGACCAATG...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTAATGCTGAGACCCCATaGGTCTGTCATCTTGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTNAETP*VCHLGT Trigger: GGTCCCAAGATGACAGACCAATGGGGTCTCAGCATT...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTGCTAAACTTCTTATCTaGCCACAGCTGACTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NWITTIHVCVDMTGTTWIAKLLI*PQLTLP Trigger: TGGGAGAGTCAGCTGTGGCAAGATAAGAAGTTTAGC...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 90 bp | CTTGGTATCGTATGTATATGGCAGGCCTCTATGCCCAGTAGTAAGTaGTCTGCTTTCATTTGTAGTGGTAAGATAAAGCAGCTTAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LGIVCIWQASMPSSK*SAFICSGKIKQLRY Trigger: GTACCTAAGCTGCTTTATCTTACCACTACAAATGAAAGCAGAGCACTTACTACTGGGCATAGAGGCCTGCCATATACATACGATACCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046763.13 |
||
| CDS-3UTR CAA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTATTGCTCAATAACCTTTaGGATCCAGGACCTGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVLLNNL*DPGPAP Trigger: AGGCGCAGGTCCTGGATCCAAAAGGTTATTGAGCAA...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTACACCCCGTCTGAGATaGTCACATCATAGCAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: NWITTIHVCVDMTGTTWITPRLR*SHHSSK Trigger: TTTACTGCTATGATGTGACAATCTCAGACGGGGTGT...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTCTTGGTGTGTTGTGTTaGCTTCCTTTCATCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NWITTIHVCVDMTGTTWILGVLC*LPFICA Trigger: TGCACAGATGAAAGGAAGCAAACACAACACACCAAG...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGCTGTGGTATAAGCAGTaGAACTTTCTTGACTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWLWYKQ*NFLDLV Trigger: CACCAAGTCAAGAAAGTTCAACTGCTTATACCACAG...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 90 bp | AGCTTTAATAAAGCGACTGTACTTGGAAAATGTCTCTGGCACTGGTaGATAGGGGTAATATCCACCAATAACCGTGTTCTTTGCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SFNKATVLGKCLWHW*IGVISTNNRVLCFQ Trigger: TTGGAAGCAAAGAACACGGTTATTGGTGGATATTACCCCTATCCACCAGTGCCAGAGACATTTTCCAAGTACAGTCGCTTTATTAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | AATTGGATCACTACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTAACCTTGGAGGTATATaGAAAATGCTGAGACCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NWITTIHVCVDMTGTTWINLGGI*KMLRPH Trigger: ATGGGGTCTCAGCATTTTCAATATACCTCCAAGGTT...AATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGTAGTGATCCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGCTTGGTGTGTTGTGTTaGCTTCCTTTCATCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLLGVLC*LPFICA Trigger: TGCACAGATGAAAGGAAGCAAACACAACACACCAAG...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTTGAACTTTCTTGACTaGGTGTGTTGTGTTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWLNFLD*VCCVCF Trigger: GAAGCAAACACAACACACCAAGTCAAGAAAGTTCAA...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTGCTAAACTTCTTATCTaGCCACAGCTGACTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTAKLLI*PQLTLP Trigger: TGGGAGAGTCAGCTGTGGCAAGATAAGAAGTTTAGC...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS TCA 90 bp | TCGATCATTTGTGATTCTTCTGGACTTCCCTGTGGTATAAGCAGTTaGACTTTCTTGACTTGGTGTGTTGTGTTTGCTTCCTTTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SIICDSSGLPCGISS*TFLTWCVVFASFHL Trigger: CAGATGAAAGGAAGCAAACACAACACACCAAGTCAAGAAAGTTCAACTGCTTATACCACAGGGAAGTCCAGAAGAATCACAAATGATCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTTACTTCACTTATTGTaGTCAAGAGTGACTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWLLHLL*SRVTQL Trigger: AAGCTGAGTCACTCTTGACAACAATAAGTGAAGTAA...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCTTTACTTCACTTATaGTTGTCAAGAGTGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWSLLHL*LSRVTQ Trigger: CTGAGTCACTCTTGACAACAATAAGTGAAGTAAAGA...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGAATTGCAATGCGCTTTaGTTCCCTATACTGCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLNCNAL*FPILQV Trigger: GACTTGCAGTATAGGGAACAAAAGCGCATTGCAATT...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | CCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGATTAGCACTTGGGCCTaGAAGAATTTTTCTTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PCVCGHDRNYLDYKKCRWISTWA*KNFSFC Trigger: GCAAAAAGAAAAATTCTTCAAGGCCCAAGTGCTAAT...CCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGCTGTGGTATAAGCAGTaGAACTTTCTTGACTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLLWYKQ*NFLDLV Trigger: CACCAAGTCAAGAAAGTTCAACTGCTTATACCACAG...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS TCA 90 bp | CTTCCACTTTATTGTTACCCAAATTACAGATATCCAAGATACCAATaGTGTGGACTCTATCCAGGTCAGCTGCTGCCTTTACAATATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPLYCYPNYRYPRYQ*CGLYPGQLLPLQYH Trigger: GTGATATTGTAAAGGCAGCAGCTGACCTGGATAGAGTCCACATCATTGGTATCTTGGATATCTGTAATTTGGGTAACAATAAAGTGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 90 bp | ACTTTATTGTTACCCAAATTACAGATATCCAAGATACCAATGATGTaGACTCTATCCAGGTCAGCTGCTGCCTTTACAATATCACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLLPKLQISKIPMM*TLSRSAAAFTISPA Trigger: TGCAGGTGATATTGTAAAGGCAGCAGCTGACCTGGATAGAGTCCACATCATTGGTATCTTGGATATCTGTAATTTGGGTAACAATAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAAATTGCAATGCGCTTTaGTTCCCTATACTGCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVNCNAL*FPILQV Trigger: GACTTGCAGTATAGGGAACAAAAGCGCATTGCAATT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAAACCTTGGAGGTATATaGAAAATGCTGAGACCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVNLGGI*KMLRPH Trigger: ATGGGGTCTCAGCATTTTCAATATACCTCCAAGGTT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTGAACTTTCTTGACTaGGTGTGTTGTGTTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLLNFLD*VCCVCF Trigger: GAAGCAAACACAACACACCAAGTCAAGAAAGTTCAA...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | ATGACAGGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGCATAGTATCGCAGTTTaGATTTATGCAGGACTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: MTGTTWIIRNVGGHFRRLHSIAV*IYAGLL Trigger: TAAGAGTCCTGCATAAATCAAAACTGCGATACTATG...CAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCCTGTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | GGAACTACCTGGATTATAAGAAATGTAGGTGGTCACTTTAGGAGACTGTTAACTTCTTTACTTCACTTATaGTTGTCAAGAGTGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTTWIIRNVGGHFRRLLTSLLHL*LSRVTQ Trigger: CTGAGTCACTCTTGACAACAATAAGTGAAGTAAAGA...AGTTAACAGTCTCCTAAAGTGACCACCTACATTTCTTATAATCCAGGTAGTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAATTAGCACTTGGGCCTaGAAGAATTTTTCTTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVISTWA*KNFSFC Trigger: GCAAAAAGAAAAATTCTTCAAGGCCCAAGTGCTAAT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS-3UTR CAA 90 bp | ACAATCCATGTGTGTGTGGACATGACAGGAACTACCTGGATTATAAGAAATGTAATCTATTTGCGATGCTaGAACATCTTCTGGAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: TIHVCVDMTGTTWIIRNVIYLRC*NIFWRI Trigger: TATTCTCCAGAAGATGTTCAAGCATCGCAAATAGAT...TACATTTCTTATAATCCAGGTAGTTCCTGTCATGTCCACACACACATGGATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 72 bp | GCGCCTCTGGCTATCAGCTCTTCGTATCACTCCACCTaGGACCCCAGCCTGATCCCTTTCGGGGTGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: APLAISSSYHST*DPSLIPFGVLQ Trigger: TTGGAGCACCCCGAAAGGGATCAGGCTGGGGTCCCAGGTGGAGTGATACGAAGAGCTGATAGCCAGAGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 72 bp | CAGGTCAGCTGCTGCCTTTACAATATCACCTGCAACTaGCTTGGGATCTGGCAACCTTCCACTGAGAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QVSCCLYNITCN*LGIWQPSTERC Trigger: GCACCTCTCAGTGGAAGGTTGCCAGATCCCAAGGCAGTTGCAGGTGATATTGTAAAGGCAGCAGCTGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 72 bp | TGCTCAATAACCTTTTGGATCCAGGACCTGCGCCTCTaGCTATCAGCTCTTCGTATCACTCCACCTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: CSITFWIQDLRL*LSALRITPPGT Trigger: GGTCCCAGGTGGAGTGATACGAAGAGCTGATAGCCAGAGGCGCAGGTCCTGGATCCAAAAGGTTATTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CAA 90 bp | CTATCCAGGTCAGCTGCTGCCTTTACAATATCACCTGCAACTGCCTaGGGATCTGGCAACCTTCCACTGAGAGGTGCTGCTGGTGGATAC | + |
|
Preference number: 6 (lower is better) Translates to: LSRSAAAFTISPATA*GSGNLPLRGAAGGY Trigger: GTATCCACCAGCAGCACCTCTCAGTGGAAGGTTGCCAGATCCCAAGGCAGTTGCAGGTGATATTGTAAAGGCAGCAGCTGACCTGGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CAA 72 bp | TCAGCTGCTGCCTTTACAATATCACCTGCAACTGCCTaGGGATCTGGCAACCTTCCACTGAGAGGTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAAAFTISPATA*GSGNLPLRGAA Trigger: AGCAGCACCTCTCAGTGGAAGGTTGCCAGATCCCAAGGCAGTTGCAGGTGATATTGTAAAGGCAGCAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CAA 90 bp | CACCACTTCCGAGAGGGTGACACACTGTCTAGGGGAACCTGTTATTaGCTCAATAACCTTTTGGATCCAGGACCTGCGCCTCTGGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: HHFREGDTLSRGTCY*LNNLLDPGPAPLAI Trigger: GATAGCCAGAGGCGCAGGTCCTGGATCCAAAAGGTTATTGAGCAAATAACAGGTTCCCCTAGACAGTGTGTCACCCTCTCGGAAGTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 72 bp | GAGAGGGTGACACACTGTCTAGGGGAACCTGTTATTTaGTCAATAACCTTTTGGATCCAGGACCTGCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ERVTHCLGEPVI*SITFWIQDLRL Trigger: GAGGCGCAGGTCCTGGATCCAAAAGGTTATTGAGCAAATAACAGGTTCCCCTAGACAGTGTGTCACCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 72 bp | CTGGACACAGAGCATTCCACAGAATCACTGACACCATaGCCGAGCTGTCAGCAACCTCCAAATAGGTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LDTEHSTESLTP*PSCQQPPNRSD Trigger: ATCAGACCTATTTGGAGGTTGCTGACAGCTCGGGCATGGTGTCAGTGATTCTGTGGAATGCTCTGTGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 72 bp | AACTGCCTTGGGATCTGGCAACCTTCCACTGAGAGGTaGTGCTGGTGGATACACACAGCTGAAATTCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: NCLGIWQPSTER*CWWIHTAEIHA Trigger: TGCATGAATTTCAGCTGTGTGTATCCACCAGCAGCACCTCTCAGTGGAAGGTTGCCAGATCCCAAGGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 72 bp | TCTATCCAGGTCAGCTGCTGCCTTTACAATATCACCTaGAACTGCCTTGGGATCTGGCAACCTTCCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SIQVSCCLYNIT*NCLGIWQPSTE Trigger: CTCAGTGGAAGGTTGCCAGATCCCAAGGCAGTTGCAGGTGATATTGTAAAGGCAGCAGCTGACCTGGATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 72 bp | ACTGTATCCCGTGGCTCATCCTCTAAAAGGTATCTTTaGACAGCCAGTACAGTGACAGGCACCACTTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: TVSRGSSSKRYL*TASTVTGTTSE Trigger: CTCGGAAGTGGTGCCTGTCACTGTACTGGCTGTCCAAAGATACCTTTTAGAGGATGAGCCACGGGATACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 72 bp | TGCCTTTACAATATCACCTGCAACTGCCTTGGGATCTaGCAACCTTCCACTGAGAGGTGCTGCTGGTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: CLYNITCNCLGI*QPSTERCCWWI Trigger: TATCCACCAGCAGCACCTCTCAGTGGAAGGTTGCCAGATCCCAAGGCAGTTGCAGGTGATATTGTAAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CAA 72 bp | CGAGAGGGTGACACACTGTCTAGGGGAACCTGTTATTaGCTCAATAACCTTTTGGATCCAGGACCTGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: REGDTLSRGTCY*LNNLLDPGPAP Trigger: AGGCGCAGGTCCTGGATCCAAAAGGTTATTGAGCAAATAACAGGTTCCCCTAGACAGTGTGTCACCCTCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CAA 72 bp | CTAAGTAGCACTTCTCCTGGTACACCCCGTCTGAGATaGTCACATCATAGCAGTAAAGGGGAGGCTTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSTSPGTPRLR*SHHSSKGEAWA Trigger: TGCCCAAGCCTCCCCTTTACTGCTATGATGTGACAATCTCAGACGGGGTGTACCAGGAGAAGTGCTACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CAA 90 bp | GGTGACACACTGTCTAGGGGAACCTGTTATTTGCTCAATAACCTTTaGGATCCAGGACCTGCGCCTCTGGCTATCAGCTCTTCGTATCAC | + |
|
Preference number: 6 (lower is better) Translates to: GDTLSRGTCYLLNNL*DPGPAPLAISSSYH Trigger: GTGATACGAAGAGCTGATAGCCAGAGGCGCAGGTCCTGGATCCAAAAGGTTATTGAGCAAATAACAGGTTCCCCTAGACAGTGTGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 72 bp | CTGAGATTGTCACATCATAGCAGTAAAGGGGAGGCTTaGGCACTGTATCCCGTGGCTCATCCTCTAAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LRLSHHSSKGEA*ALYPVAHPLKG Trigger: ACCTTTTAGAGGATGAGCCACGGGATACAGTGCCCAAGCCTCCCCTTTACTGCTATGATGTGACAATCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 72 bp | CTTGGGATCTGGCAACCTTCCACTGAGAGGTGCTGCTaGTGGATACACACAGCTGAAATTCATGCAAGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LGIWQPSTERCC*WIHTAEIHASQ Trigger: TTGACTTGCATGAATTTCAGCTGTGTGTATCCACCAGCAGCACCTCTCAGTGGAAGGTTGCCAGATCCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS TCA 72 bp | ATGACAATGATCTTCTTTCCCAGCTGCTTGAGATGTTaGGGGACGGCTAGCATTCCAGAATGCTTCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MTMIFFPSCLRC*GTASIPECFWC Trigger: GCACCAGAAGCATTCTGGAATGCTAGCCGTCCCTCAACATCTCAAGCAGCTGGGAAAGAAGATCATTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS CCA 72 bp | GTTTCTACAGAAATGACATCTAGGGACTCCCCACAGTaGACCTTATCTATGCACAGGATTCCCTGGCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VSTEMTSRDSPQ*TLSMHRIPWPN Trigger: ATTGGGCCAGGGAATCCTGTGCATAGATAAGGTCCACTGTGGGGAGTCCCTAGATGTCATTTCTGTAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS TCA 72 bp | ATTCCAGAATGCTTCTGGTGCTGGGGCACTTCCGGCTaGGTGCTTATAGGGGATGTACTTTATAGCAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: IPECFWCWGTSG*VLIGDVLYSSN Trigger: ATTACTGCTATAAAGTACATCCCCTATAAGCACTCAGCCGGAAGTGCCCCAGCACCAGAAGCATTCTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 72 bp | TTTTCAAAGACTTCTGGCTGCGATGTGGAGAACAGCTaGACTATGAATGGTTGCTCTGAAGTCCCATCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSKTSGCDVENS*TMNGCSEVPSV Trigger: CACTGATGGGACTTCAGAGCAACCATTCATAGTGCAGCTGTTCTCCACATCGCAGCCAGAAGTCTTTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
||
| CDS GCA 72 bp | TTGACTTGGTGTGTTGTGTTTGCTTCCTTTCATCTGTaGAGAAGAATGCGGCTGAGGAACAGGAACCGGATT | + |
|
Preference number: 6 (lower is better) Translates to: LTWCVVFASFHL*RRMRLRNRNRI Trigger: AATCCGGTTCCTGTTCCTCAGCCGCATTCTTCTGCACAGATGAAAGGAAGCAAACACAACACACCAAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS TCA 72 bp | ACTATGAATGGTTGCTCTGAAGTCCCATCAGTGATGTaGATCCAGCGGTATGACCAAAAGTCTTCACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: TMNGCSEVPSVM*IQRYDQKSSLF Trigger: GAACAGTGAAGACTTTTGGTCATACCGCTGGATTCACATCACTGATGGGACTTCAGAGCAACCATTCATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS GCA 72 bp | TTTGCCTTGGTATCGTATGTATATGGCAGGCCTCTATaGCCAGTAGTAAGTGCTCTGCTTTCATTTGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: FALVSYVYGRPL*PVVSALLSFVV Trigger: CACTACAAATGAAAGCAGAGCACTTACTACTGGGCATAGAGGCCTGCCATATACATACGATACCAAGGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046763.13 |
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| CDS GCA 72 bp | AAGCAGTTGAACTTTCTTGACTTGGTGTGTTGTGTTTaGTTCCTTTCATCTGTGCAGAAGAATGCGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: KQLNFLDLVCCV*FLSSVQKNAAE Trigger: CTCAGCCGCATTCTTCTGCACAGATGAAAGGAAGCAAACACAACACACCAAGTCAAGAAAGTTCAACTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CAA 90 bp | TTCTTCTGGACTTCCCTGTGGTATAAGCAGTTGAACTTTCTTGACTaGGTGTGTTGTGTTTGCTTCCTTTCATCTGTGCAGAAGAATGCG | + |
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Preference number: 6 (lower is better) Translates to: FFWTSLWYKQLNFLD*VCCVCFLSSVQKNA Trigger: CGCATTCTTCTGCACAGATGAAAGGAAGCAAACACAACACACCAAGTCAAGAAAGTTCAACTGCTTATACCACAGGGAAGTCCAGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS TCA 72 bp | TGTGATTCTTCTGGACTTCCCTGTGGTATAAGCAGTTaGACTTTCTTGACTTGGTGTGTTGTGTTTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CDSSGLPCGISS*TFLTWCVVFAS Trigger: GGAAGCAAACACAACACACCAAGTCAAGAAAGTTCAACTGCTTATACCACAGGGAAGTCCAGAAGAATCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CCA 72 bp | AGCTTTAATAAAGCGACTGTACTTGGAAAATGTCTCTaGCACTGGTGGATAGGGGTAATATCCACCAATAAC | + |
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Preference number: 6 (lower is better) Translates to: SFNKATVLGKCL*HWWIGVISTNN Trigger: GTTATTGGTGGATATTACCCCTATCCACCAGTGCCAGAGACATTTTCCAAGTACAGTCGCTTTATTAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS TCA 72 bp | TATTGTTACCCAAATTACAGATATCCAAGATACCAATaGTGTGGACTCTATCCAGGTCAGCTGCTGCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: YCYPNYRYPRYQ*CGLYPGQLLPL Trigger: TAAAGGCAGCAGCTGACCTGGATAGAGTCCACATCATTGGTATCTTGGATATCTGTAATTTGGGTAACAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS GCA 72 bp | CAAAAGTCTTCACTGTTCTCTTTCTTCTTTGACCGTTaGACCCTCCCTACAAAGGATAACAAACCAATTACA | + |
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Preference number: 6 (lower is better) Translates to: QKSSLFSFFFDR*TLPTKDNKPIT Trigger: TGTAATTGGTTTGTTATCCTTTGTAGGGAGGGTGCAACGGTCAAAGAAGAAAGAGAACAGTGAAGACTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CCA 72 bp | TTACCCAAATTACAGATATCCAAGATACCAATGATGTaGACTCTATCCAGGTCAGCTGCTGCCTTTACAATA | + |
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Preference number: 6 (lower is better) Translates to: LPKLQISKIPMM*TLSRSAAAFTI Trigger: TATTGTAAAGGCAGCAGCTGACCTGGATAGAGTCCACATCATTGGTATCTTGGATATCTGTAATTTGGGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CAA 90 bp | TGCTCTGCTTTCATTTGTAGTGGTAAGATAAAGCAGCTTAGGTACTaGGCTGTTATTTCTAACGACTTTCAACTGGGTGCACACAAAATA | + |
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Preference number: 6 (lower is better) Translates to: CSAFICSGKIKQLRY*AVISNDFQLGAHKI Trigger: TATTTTGTGTGCACCCAGTTGAAAGTCGTTAGAAATAACAGCCAAGTACCTAAGCTGCTTTATCTTACCACTACAAATGAAAGCAGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CAA 72 bp | TTCATTTGTAGTGGTAAGATAAAGCAGCTTAGGTACTaGGCTGTTATTTCTAACGACTTTCAACTGGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: FICSGKIKQLRY*AVISNDFQLGA Trigger: TGCACCCAGTTGAAAGTCGTTAGAAATAACAGCCAAGTACCTAAGCTGCTTTATCTTACCACTACAAATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CAA 72 bp | TATAGCAGTAATTATCCCCTGAATTGCAATGCGCTTTaGTTCCCTATACTGCAAGTCTTCAATCACCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: YSSNYPLNCNAL*FPILQVFNHLL Trigger: AAGAAGGTGATTGAAGACTTGCAGTATAGGGAACAAAAGCGCATTGCAATTCAGGGGATAATTACTGCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CAA 90 bp | GATGTACTTTATAGCAGTAATTATCCCCTGAATTGCAATGCGCTTTaGTTCCCTATACTGCAAGTCTTCAATCACCTTCTTTACTTCACT | + |
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Preference number: 6 (lower is better) Translates to: DVLYSSNYPLNCNAL*FPILQVFNHLLYFT Trigger: AGTGAAGTAAAGAAGGTGATTGAAGACTTGCAGTATAGGGAACAAAAGCGCATTGCAATTCAGGGGATAATTACTGCTATAAAGTACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS GCA 72 bp | TGGATAGGGGTAATATCCACCAATAACCGTGTTCTTTaGTTCCAAATTAGTCTTCGTTTTAATCCACTGAAT | + |
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Preference number: 6 (lower is better) Translates to: WIGVISTNNRVL*FQISLRFNPLN Trigger: ATTCAGTGGATTAAAACGAAGACTAATTTGGAAGCAAAGAACACGGTTATTGGTGGATATTACCCCTATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CCA 72 bp | CAATTGCTTTTCTGGAATGATAACTATGTTAGTTGGTaGATCTCGAAGATTCAGGCAAATTTCCATAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: QLLFWNDNYVSW*ISKIQANFHSR Trigger: TCTACTATGGAAATTTGCCTGAATCTTCGAGATCCACCAACTAACATAGTTATCATTCCAGAAAAGCAATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CAA 72 bp | GATTATTTTGATGTTGTTAAAATTGAATTCCTCAGGTaGCTTGTTGGTCTTCCAAATATCTCCGTACGGATC | + |
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Preference number: 6 (lower is better) Translates to: DYFDVVKIEFLR*LVGLPNISVRI Trigger: GATCCGTACGGAGATATTTGGAAGACCAACAAGCAACCTGAGGAATTCAATTTTAACAACATCAAAATAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CAA 72 bp | ACAGCTGAAATTCATGCAAGTCAAAAATGTATCTATTaGCGATGCTTGAACATCTTCTGGAGAATACATAGG | + |
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Preference number: 6 (lower is better) Translates to: TAEIHASQKCIY*RCLNIFWRIHR Trigger: CCTATGTATTCTCCAGAAGATGTTCAAGCATCGCAAATAGATACATTTTTGACTTGCATGAATTTCAGCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS TCA 72 bp | TTCATGCAAGTCAAAAATGTATCTATTTGCGATGCTTaGACATCTTCTGGAGAATACATAGGTAGAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: FMQVKNVSICDA*TSSGEYIGRNA Trigger: TGCATTTCTACCTATGTATTCTCCAGAAGATGTTCAAGCATCGCAAATAGATACATTTTTGACTTGCATGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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| CDS CCA 72 bp | TTTCAATTGCTTTTCTGGAATGATAACTATGTTAGTTaGTGGATCTCGAAGATTCAGGCAAATTTCCATAGT | + |
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Preference number: 6 (lower is better) Translates to: FQLLFWNDNYVS*WISKIQANFHS Trigger: ACTATGGAAATTTGCCTGAATCTTCGAGATCCACCAACTAACATAGTTATCATTCCAGAAAAGCAATTGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046763.13 ENSMUST00000113030.3 |
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