RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RADIL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029576

Ensembl transcript IDs: ENSMUST00000063635.15, ENSMUST00000085758.10, ENSMUST00000110784.8, ENSMUST00000110785.2, ENSMUST00000129212.2, ENSMUST00000139278.2

Found 433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATAAATATACACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTaGGGCCACAACATAGGGACTCACTCAGTCAACTTTAAAAACCAG +
Preference number: 1 (lower is better)
Translates to: NKYTLRCTLSKVSST*GHNIGTHSVNFKNQ
Trigger: CTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGTGTATATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAACAGGAAACAGGTGGTaGGGACAAGGGTCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGTGNRW*GQGSFG
Trigger: ACCAAAGGACCCTTGTCCCCACCACCTGTTTCCTGT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCCAGGATTGGCTGGACTaGGGTGTGAGGGGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLQDWLD*GVRGRV
Trigger: CACCCTGCCCCTCACACCCCAGTCCAGCCAATCCTG...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCTGCCGTGGTGGCTGTTaGTGGCACCTGGAGAGGATA +
Preference number: 2 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLCRGGC*WHLERI
Trigger: TATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR-3UTR CCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACCGTGGTGGCTGTTGGTaGCACCTGGAGAGGATACAG +
Preference number: 2 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDRGGCW*HLERIQ
Trigger: CTGTATCCTCTCCAGGTGCCACCAACAGCCACCACG...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR-3UTR CCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACACAGGAAACAGGTGGTaGGGACAAGGGTCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDTGNRW*GQGSFG
Trigger: ACCAAAGGACCCTTGTCCCCACCACCTGTTTCCTGT...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR-3UTR CCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTCGTGGTGGCTGTTGGTaGCACCTGGAGAGGATACAG +
Preference number: 2 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGRGGCW*HLERIQ
Trigger: CTGTATCCTCTCCAGGTGCCACCAACAGCCACCACG...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR-3UTR CCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTTGCCGTGGTGGCTGTTaGTGGCACCTGGAGAGGATA +
Preference number: 2 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGCRGGC*WHLERI
Trigger: TATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR-3UTR CCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGATACAGGAAACAGGTaGTGGGGACAAGGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGDTGNR*WGQGSF
Trigger: AAAGGACCCTTGTCCCCACCACCTGTTTCCTGTATC...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR CCA 72 bp GGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTaGAGAGGATACAGGAAACAGGTGGTGGGGACAAGG +
Preference number: 3 (lower is better)
Translates to: GRVSAVVAVGGT*RGYRKQVVGTR
Trigger: CCTTGTCCCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR CCA 72 bp TGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTaGCACCTGGAGAGGATACAGGAAACAGGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: CEGQGECRGGCW*HLERIQETGGG
Trigger: CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
3UTR TCA 72 bp ACACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTaGGGCCACAACATAGGGACTCACTCAGTCAACTTT +
Preference number: 3 (lower is better)
Translates to: TLRCTLSKVSST*GHNIGTHSVNF
Trigger: AAAGTTGACTGAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGGAGGCCGCTGGGCTCTaGCCAGCTGGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLEREAAGL*PAGACR
Trigger: CCTGCAGGCCCCAGCTGGCCAGAGCCCAGCGGCCTC...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGACTTCCAGGGGGACCCTaGGCCCGGGGAGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRLPGGP*ARGAPV
Trigger: CACGGGAGCTCCCCGGGCTCAGGGTCCCCCTGGAAG...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGCTGTCAGGGCTGGCTTaGCCCCGCAGCCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERLSGLA*PRSPHR
Trigger: CCTGTGGGGGCTGCGGGGCCAAGCCAGCCCTGACAG...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGAGGCCGCTGGGCTCTaGCCAGCTGGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGEAAGL*PAGACR
Trigger: CCTGCAGGCCCCAGCTGGCCAGAGCCCAGCGGCCTC...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGACAGCCGCCCATCAGATaGCGCGGGGCTCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRQPPIR*RGAPGK
Trigger: CTTCCCGGGAGCCCCGCGGCATCTGATGGGCGGCTG...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACAGCCGCCCATCAGATaGCGCGGGGCTCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGQPPIR*RGAPGK
Trigger: CTTCCCGGGAGCCCCGCGGCATCTGATGGGCGGCTG...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGGCCGTCTGGGGCTCCTaGCTCCCAAGCGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERAVWGS*LPSAHR
Trigger: CCTGTGAGCGCTTGGGAGCCAGGAGCCCCAGACGGC...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGTGCAGAGAGCCAGCCTaGGAGCCCCTGCGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERCREPA*EPLRSP
Trigger: AGGGGACCGCAGGGGCTCCCAGGCTGGCTCTCTGCA...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGGAGGCCGCTGGGCTCTaGCCAGCTGGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYREAAGL*PAGACR
Trigger: CCTGCAGGCCCCAGCTGGCCAGAGCCCAGCGGCCTC...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGCCTCAGCGCTGGAGCTaGGGCTGGAGGCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERPQRWS*GWRPQQ
Trigger: CTGCTGAGGCCTCCAGCCCCAGCTCCAGCGCTGAGG...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAAACTCCAGGAGCAGTaGCCGCCGCCGGACCACAGC +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERKLQEQ*PPPDHS
Trigger: GCTGTGGTCCGGCGGCGGTCACTGCTCCTGGAGTTT...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGTCAGGGCAGGGAATGTaGCCCTCAGGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERSGQGM*PSGWPS
Trigger: GCTGGGCCACCCTGAGGGTCACATTCCCTGCCCTGA...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGCTCCAGGATGTCCTCTaGCTGGAAGGCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERLQDVL*LEGLRA
Trigger: GGCCCGGAGGCCTTCCAGTCAGAGGACATCCTGGAG...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATGGGCCTGCCACCGCTaGCCAGAGTCCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGWACHR*PESPAW
Trigger: CCAAGCTGGGGACTCTGGGCAGCGGTGGCAGGCCCA...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGATGGGCCTGCCACCGCTaGCCAGAGTCCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRWACHR*PESPAW
Trigger: CCAAGCTGGGGACTCTGGGCAGCGGTGGCAGGCCCA...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGACGGAAGCACTGGGCCTaGCACCGCTGCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRRKHWA*HRCPES
Trigger: GGACTCTGGGCAGCGGTGGCAGGCCCAGTGCTTCCG...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGCCGTCTGGGGCTCCTaGCTCCCAAGCGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRAVWGS*LPSAHR
Trigger: CCTGTGAGCGCTTGGGAGCCAGGAGCCCCAGACGGC...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGATTCCACAGAGGCCGCTaGGCTCTGGCCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRFHRGR*ALASWG
Trigger: GCCCCAGCTGGCCAGAGCCCAGCGGCCTCTGTGGAA...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACCTCAGCGCTGGAGCTaGGGCTGGAGGCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGPQRWS*GWRPQQ
Trigger: CTGCTGAGGCCTCCAGCCCCAGCTCCAGCGCTGAGG...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGACCTCAGCGCTGGAGCTaGGGCTGGAGGCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRPQRWS*GWRPQQ
Trigger: CTGCTGAGGCCTCCAGCCCCAGCTCCAGCGCTGAGG...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGGGGCCCCACGGGCTCTaGGCACCGCACCACACATTC +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRGPHGL*APHHTF
Trigger: GAATGTGTGGTGCGGTGCTCAGAGCCCGTGGGGCCC...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAAGAAGCCGGTGCAGCTaGGCAGGGTTCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGRSRCS*AGFRAG
Trigger: CCCTGCCCTGAACCCTGCTCAGCTGCACCGGCTTCT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAAGAAGCCGGTGCAGCTaGGCAGGGTTCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRRSRCS*AGFRAG
Trigger: CCCTGCCCTGAACCCTGCTCAGCTGCACCGGCTTCT...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGCGGAAGCACTGGGCCTaGCACCGCTGCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRRKHWA*HRCPES
Trigger: GGACTCTGGGCAGCGGTGGCAGGCCCAGTGCTTCCG...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAAGGCGGGCACACACCTaGACACCCCTGGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGRRAHT*TPLGQW
Trigger: CCATTGGCCCAGGGGTGTGCAGGTGTGTGCCCGCCT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGCACTCCAGGAACTGCTaGAGGCGGGCACACACCTGC +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERHSRNC*RRAHTC
Trigger: GCAGGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTG...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGACCCAGCTCATCTGGATaGGCTGAGCCCTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRPSSSG*AEPWEW
Trigger: CCACTCCCAGGGCTCAGCTCATCCAGATGAGCTGGG...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGTCAGGGCAGGGAATGTaGCCCTCAGGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRSGQGM*PSGWPS
Trigger: GCTGGGCCACCCTGAGGGTCACATTCCCTGCCCTGA...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAGAAGCCGGTGCAGCTaGGCAGGGTTCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRRSRCS*AGFRAG
Trigger: CCCTGCCCTGAACCCTGCTCAGCTGCACCGGCTTCT...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACTGCCCTCATGTAGCTaGCACCCCTCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGLPSCS*HPSGCC
Trigger: GCAGCAGCCTGAGGGGTGTCAGCTACATGAGGGCAG...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGCCGGGGGCCGAGAGCTaGGTGGAGAGCTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWPGAES*VESSEG
Trigger: CCCCTCAGAGCTCTCCACGCAGCTCTCGGCCCCCGG...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCCGGGGGCCGAGAGCTaGGTGGAGAGCTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGPGAES*VESSEG
Trigger: CCCCTCAGAGCTCTCCACGCAGCTCTCGGCCCCCGG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGGCAGTGGCTGTGCCTaGCCAGGGTCCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGGSGCA*PGSLNS
Trigger: GCTGTTCAAGGACCCTGGGCAGGCACAGCCACTGCC...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAGGCGGGCACACACCTaGACACCCCTGGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRRRAHT*TPLGQW
Trigger: CCATTGGCCCAGGGGTGTGCAGGTGTGTGCCCGCCT...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGAAGCGCTCAGCAGGTaGTCCAAGGCCAGCACTCCG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGEALSR*SKASTP
Trigger: CGGAGTGCTGGCCTTGGAGCACCTGCTGAGCGCTTC...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGCCGGCTGGAAGTGCATaGCGGAGTGCTGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERPAGSA*RSAGCR
Trigger: TCTGCATCCAGCACTCCGCCATGCACTTCCAGCCGG...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGCTGGCCCAGGAGATaGGCTCCTGGAGTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERSWPRR*APGVVP
Trigger: AGGCACAACTCCAGGAGCCCATCTCCTGGGCCAGCT...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGGCTTCCAGGTCTACCTaGAAGCCCTGGCTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERASRST*KPWLGR
Trigger: TCTGCCGAGCCAGGGCTTCCAGGTAGACCTGGAAGC...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAATGCAGAGAGCCAGCCTaGGAGCCCCTGCGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQECREPA*EPLRSP
Trigger: AGGGGACCGCAGGGGCTCCCAGGCTGGCTCTCTGCA...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAACCAGGCAGACCACCTaGCCCATTCCTCTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGTRQTT*PIPLPV
Trigger: GACGGGCAGAGGAATGGGCCAGGTGGTCTGCCTGGT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAACTCCTTGGAGCCTGTaGCGTCCAGCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGTPWSL*RPAPPP
Trigger: TGGAGGAGGAGCTGGACGTCACAGGCTCCAAGGAGT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAATCAGGGCAGGGAATGTaGCCCTCAGGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQESGQGM*PSGWPS
Trigger: GCTGGGCCACCCTGAGGGTCACATTCCCTGCCCTGA...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCGGAAGCACTGGGCCTaGCACCGCTGCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGRKHWA*HRCPES
Trigger: GGACTCTGGGCAGCGGTGGCAGGCCCAGTGCTTCCG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGATGCAACAGCAGCAGGTaGGGGCACTGGTACAGCGAG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRCNSSR*GHWYSE
Trigger: CTCGCTGTACCAGTGCCCGCACCTGCTGCTGTTGCA...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATGCAACAGCAGCAGGTaGGGGCACTGGTACAGCGAG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGCNSSR*GHWYSE
Trigger: CTCGCTGTACCAGTGCCCGCACCTGCTGCTGTTGCA...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAAGCAGGCAGTGGCTGTaGCTGCCCAGGGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGSRQWL*LPRVLE
Trigger: TTCAAGGACCCTGGGCAGGCACAGCCACTGCCTGCT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGTACCCGGCTGGAAGTaGATGGCGGAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRVPGWK*MAECWM
Trigger: CATCCAGCACTCCGCCATGCACTTCCAGCCGGGTAC...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGCCAGCTCCTCCTCCATaGTCTGCACGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRPAPPP*SARTAG
Trigger: CCCCGCTGTACGTGCAGAGCATGGAGGAGGAGCTGG...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACGCTGGCCGTCAGTGTaGAGGAGAACAGCGACTCCT +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGRWPSV*RRTATP
Trigger: AGGAGTCGCTGTTCTCCTGCACACTGACGGCCAGCG...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATGCATCTGCAGCTGCTaGAGGAGGTCCAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGCICSC*RRSKVA
Trigger: GGCCACCTTGGACCTCCTGCAGCAGCTGCAGATGCA...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACCTCAGGATGCATCTaGAGCTGCTGCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERTSGCI*SCCRRS
Trigger: GGACCTCCTGCAGCAGCTGCAGATGCATCCTGAGGT...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGAGGCCACCTCAGGATaGATCTGCAGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGEATSG*ICSCCR
Trigger: CCTGCAGCAGCTGCAGATGCATCCTGAGGTGGCCTC...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAAGGCGGGCACACACCTaGACACCCCTGGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQERRAHT*TPLGQW
Trigger: CCATTGGCCCAGGGGTGTGCAGGTGTGTGCCCGCCT...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAGCCCACTCCAGGAACTaGTGCAGGCGGGCACACACC +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEAHSRN*CRRAHT
Trigger: GGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTGGGC...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGCAGGTGCTGGTAGATaGTGTCCTCCACGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRAGAGR*CPPRSR
Trigger: CCGACTGCGTGGAGGACAGCATCTACCAGCACCTGC...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGCCAGCTCCTGGGCACTaGAGGAGCCAGTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRPAPGH*RSQWPR
Trigger: TCTTGGCCACTGGCTCCTCCAGTGCCCAGGAGCTGG...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAAATACTCGGAAGCACTaGGCCTGCCACCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRNTRKH*ACHRCP
Trigger: TGGGCAGCGGTGGCAGGCCCAGTGCTTCCGAGTATT...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAGGCACAAGCAGGCAGTaGCTGTGCCTGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEGTSRQ*LCLPRV
Trigger: GACCCTGGGCAGGCACAGCCACTGCCTGCTTGTGCC...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGATGCATGGCGGAGTGCTaGATGCAGAGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRCMAEC*MQRQRR
Trigger: CCTCCTCTGCCTCTGCATCCAGCACTCCGCCATGCA...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATGCATGGCGGAGTGCTaGATGCAGAGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGCMAEC*MQRQRR
Trigger: CCTCCTCTGCCTCTGCATCCAGCACTCCGCCATGCA...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAAGCTGGCCCAGGAGATaGGCTCCTGGAGTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGSWPRR*APGVVP
Trigger: AGGCACAACTCCAGGAGCCCATCTCCTGGGCCAGCT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACACCCCTGGGCCAATaGAAGCAACTCAGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERTPLGQ*KQLREG
Trigger: GCCCTCTCTGAGTTGCTTCCATTGGCCCAGGGGTGT...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCCGTCTGGGGCTCCTaGCTCCCAAGCGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWAVWGS*LPSAHR
Trigger: CCTGTGAGCGCTTGGGAGCCAGGAGCCCCAGACGGC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGTCTACCTGGAAGCCCTaGCTCGGCAGAACAATGGGC +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERSTWKP*LGRTMG
Trigger: GCCCATTGTTCTGCCGAGCCAGGGCTTCCAGGTAGA...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAATGCCTGGGTCCCTATTaGCCAGGGGGCAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQECLGPY*PGGSHG
Trigger: GCCATGGCTGCCCCCTGGCCAATAGGGACCCAGGCA...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGTGCAGAGAGCCAGCCTaGGAGCCCCTGCGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWCREPA*EPLRSP
Trigger: AGGGGACCGCAGGGGCTCCCAGGCTGGCTCTCTGCA...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGTGCAGAGAGCCAGCCTaGGAGCCCCTGCGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGCREPA*EPLRSP
Trigger: AGGGGACCGCAGGGGCTCCCAGGCTGGCTCTCTGCA...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGTTCCACAGAGGCCGCTaGGCTCTGGCCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGFHRGR*ALASWG
Trigger: GCCCCAGCTGGCCAGAGCCCAGCGGCCTCTGTGGAA...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAGAAGTCCTCAGCGCTaGAGCTGGGGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRRSPQR*SWGWRP
Trigger: AGGCCTCCAGCCCCAGCTCCAGCGCTGAGGACTTCT...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATTTCAACCAGTGGCTaGGGGAAGGCTGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERISTSG*GKAGAP
Trigger: TGGGGCTCCAGCCTTCCCCCAGCCACTGGTTGAAAT...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000085758.10
CDS-3UTR TCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGTCAGGGCAGGGAATGTaGCCCTCAGGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGSGQGM*PSGWPS
Trigger: GCTGGGCCACCCTGAGGGTCACATTCCCTGCCCTGA...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGAGAAGCCGGTGCAGCTaGGCAGGGTTCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGRSRCS*AGFRAG
Trigger: CCCTGCCCTGAACCCTGCTCAGCTGCACCGGCTTCT...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGCTCCAGGATGTCCTCTaGCTGGAAGGCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWLQDVL*LEGLRA
Trigger: GGCCCGGAGGCCTTCCAGTCAGAGGACATCCTGGAG...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCTCCAGGATGTCCTCTaGCTGGAAGGCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGLQDVL*LEGLRA
Trigger: GGCCCGGAGGCCTTCCAGTCAGAGGACATCCTGGAG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGGCTCCAGCTCCACCATaGACACGTAGCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERAPAPP*TRSRSP
Trigger: AGGACTTCTGCTACGTGTTCATGGTGGAGCTGGAGC...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAACTGCCCTCATGTAGCTaGCACCCCTCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQELPSCS*HPSGCC
Trigger: GCAGCAGCCTGAGGGGTGTCAGCTACATGAGGGCAG...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGGCATAGCGCTCCAGTaGCTCTTTCACCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGGIALQ*LFHQLL
Trigger: CAGGAGCTGGTGAAAGAGGCACTGGAGCGCTATGCC...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAAAGTGCATGGCGGAGTaGTGGATGCAGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRKCMAE*WMQRQR
Trigger: CCTCTGCCTCTGCATCCAGCACTCCGCCATGCACTT...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATCTTGAGCAGGAGATaGCTGAAGGTACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERILSRR*LKVPGW
Trigger: CCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGAT...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGCAAAACAGGATGTGCTaGAGGTCGGGAACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERQNRMC*RSGTRS
Trigger: CGACCTGGTTCCCGACCTGCAGCACATCCTGTTTTG...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAACCAGCTCCTCCTCCATaGTCTGCACGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEPAPPP*SARTAG
Trigger: CCCCGCTGTACGTGCAGAGCATGGAGGAGGAGCTGG...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATGCATCTGCAGCTaGTGCAGGAGGTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRGCICS*CRRSKV
Trigger: CACCTTGGACCTCCTGCAGCAGCTGCAGATGCATCC...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAACCTCAGGATGCATCTaGAGCTGCTGCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRTSGCI*SCCRRS
Trigger: GGACCTCCTGCAGCAGCTGCAGATGCATCCTGAGGT...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCCCACTCCAGGAACTaGTGCAGGCGGGCACACACC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWAHSRN*CRRAHT
Trigger: GGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTGGGC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGGCCCACTCCAGGAACTaGTGCAGGCGGGCACACACC +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGAHSRN*CRRAHT
Trigger: GGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTGGGC...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGTGGCCAGCAGATaGAGGGTGCAGGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRGVASR*RVQESF
Trigger: GAAGCTTTCCTGCACCCTGCATCTGCTGGCCACTCC...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGGCAGGTGCTGGTAGATaGTGTCCTCCACGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRAGAGR*CPPRSR
Trigger: CCGACTGCGTGGAGGACAGCATCTACCAGCACCTGC...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGACCTGGCCCATTCCTCTaGCCGTCAAGGACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRPGPFL*PSRTAL
Trigger: AAGAGCAGTCCTTGACGGGCAGAGGAATGGGCCAGG...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGTCCGGGACAGCATTGTaGATAGGAGCTGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERSGTAL*IGAGSV
Trigger: GACAGAGCCAGCTCCTATCCACAATGCTGTCCCGGA...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAACCAGCTCCTGGGCACTaGAGGAGCCAGTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEPAPGH*RSQWPR
Trigger: TCTTGGCCACTGGCTCCTCCAGTGCCCAGGAGCTGG...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGTCACATAGCACGTACTaGCCAGCACACTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERSHSTY*PAHSGS
Trigger: GGACCCTGAGTGTGCTGGCCAGTACGTGCTATGTGA...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGCGGGGACTTCTGCTaGATGAAGTACAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERSGDFC*MKYRSS
Trigger: CGAGCTCCTGTACTTCATCCAGCAGAAGTCCCCGCT...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGCAGGAGGTCCAAGGTaGCCTGGAACACTGACACCA +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRAGGPR*PGTLTP
Trigger: TGGTGTCAGTGTTCCAGGCCACCTTGGACCTCCTGC...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAACACCCCTGGGCCAATaGAAGCAACTCAGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRTPLGQ*KQLREG
Trigger: GCCCTCTCTGAGTTGCTTCCATTGGCCCAGGGGTGT...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAACACCCCTGGGCCAATaGAAGCAACTCAGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGTPLGQ*KQLREG
Trigger: GCCCTCTCTGAGTTGCTTCCATTGGCCCAGGGGTGT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGTGCCTGGGTCCCTATTaGCCAGGGGGCAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWCLGPY*PGGSHG
Trigger: GCCATGGCTGCCCCCTGGCCAATAGGGACCCAGGCA...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGGACTTCTGCTGGATaGAGTACAGGAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRGTSAG*STGARW
Trigger: CCATCGAGCTCCTGTACTTCATCCAGCAGAAGTCCC...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACTCCTTGGAGCCTGTaGCGTCCAGCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQETPWSL*RPAPPP
Trigger: TGGAGGAGGAGCTGGACGTCACAGGCTCCAAGGAGT...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGCTCATCTGGATGAGCTaGGCCCTGGGAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWLIWMS*ALGVAS
Trigger: GCTGGCCACTCCCAGGGCTCAGCTCATCCAGATGAG...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCTCATCTGGATGAGCTaGGCCCTGGGAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGLIWMS*ALGVAS
Trigger: GCTGGCCACTCCCAGGGCTCAGCTCATCCAGATGAG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCCCAGCTCATCTGGATaGGCTGAGCCCTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGPSSSG*AEPWEW
Trigger: CCACTCCCAGGGCTCAGCTCATCCAGATGAGCTGGG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGCCCAGCTCATCTGGATaGGCTGAGCCCTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWPSSSG*AEPWEW
Trigger: CCACTCCCAGGGCTCAGCTCATCCAGATGAGCTGGG...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGCTCCAGCTCCACCATaGACACGTAGCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGAPAPP*TRSRSP
Trigger: AGGACTTCTGCTACGTGTTCATGGTGGAGCTGGAGC...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGCTCCAGCTCCACCATaGACACGTAGCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRAPAPP*TRSRSP
Trigger: AGGACTTCTGCTACGTGTTCATGGTGGAGCTGGAGC...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCTGCCCTCATGTAGCTaGCACCCCTCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGLPSCS*HPSGCC
Trigger: GCAGCAGCCTGAGGGGTGTCAGCTACATGAGGGCAG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGGCAGTGGCTGTGCCTaGCCAGGGTCCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWGSGCA*PGSLNS
Trigger: GCTGTTCAAGGACCCTGGGCAGGCACAGCCACTGCC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAGTACCCGGCTGGAAGTaGATGGCGGAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEVPGWK*MAECWM
Trigger: CATCCAGCACTCCGCCATGCACTTCCAGCCGGGTAC...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAATCTTGAGCAGGAGATaGCTGAAGGTACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRILSRR*LKVPGW
Trigger: CCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGAT...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACAAAACAGGATGTGCTaGAGGTCGGGAACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGQNRMC*RSGTRS
Trigger: CGACCTGGTTCCCGACCTGCAGCACATCCTGTTTTG...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCCAGCTCCTCCTCCATaGTCTGCACGTACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGPAPPP*SARTAG
Trigger: CCCCGCTGTACGTGCAGAGCATGGAGGAGGAGCTGG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAACGCTGGCCGTCAGTGTaGAGGAGAACAGCGACTCCT +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQERWPSV*RRTATP
Trigger: AGGAGTCGCTGTTCTCCTGCACACTGACGGCCAGCG...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGCACTCCAGGAACTGCTaGAGGCGGGCACACACCTGC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWHSRNC*RRAHTC
Trigger: GCAGGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTG...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGAAGCGCTCAGCAGGTaGTCCAAGGCCAGCACTCCG +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWEALSR*SKASTP
Trigger: CGGAGTGCTGGCCTTGGAGCACCTGCTGAGCGCTTC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGACCAGCAGATGCAGGGTaGAGGAAAGCTTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRPADAG*RKASGR
Trigger: TCTTCCGGAAGCTTTCCTGCACCCTGCATCTGCTGG...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACCAGCAGATGCAGGGTaGAGGAAAGCTTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGPADAG*RKASGR
Trigger: TCTTCCGGAAGCTTTCCTGCACCCTGCATCTGCTGG...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGGGAGTGGCCAGCAGATaGAGGGTGCAGGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRGVASR*RVQESF
Trigger: GAAGCTTTCCTGCACCCTGCATCTGCTGGCCACTCC...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAGCAGGTGCTGGTAGATaGTGTCCTCCACGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEAGAGR*CPPRSR
Trigger: CCGACTGCGTGGAGGACAGCATCTACCAGCACCTGC...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAACTGCCCGTCAAGGACTaGTCTTCCACAGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQELPVKD*SSTEAA
Trigger: AGCGGCCTCTGTGGAAGAGCAGTCCTTGACGGGCAG...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACCAGAGTCCCCAGCTTaGCCCACAACATCACATAGC +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGPESPA*PTTSHS
Trigger: GCTATGTGATGTTGTGGGCCAAGCTGGGGACTCTGG...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAAGCGGGGACTTCTGCTaGATGAAGTACAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGSGDFC*MKYRSS
Trigger: CGAGCTCCTGTACTTCATCCAGCAGAAGTCCCCGCT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGAGAAGTCCTCAGCGCTaGAGCTGGGGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGRSPQR*SWGWRP
Trigger: AGGCCTCCAGCCCCAGCTCCAGCGCTGAGGACTTCT...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGATTCACCTCCAGGATTTaGTCTCCGAGTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRFTSRI*SPSDSR
Trigger: GCGGCTGTCACTCGGAGACCAAATCCTGGAGGTGAA...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGTCGGTGGGGAGCTTTaGGCAGCTTCAGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWVGGEL*AASEVR
Trigger: CCTCACCTCTGAAGCTGCTCAAAGCTCCCCACCGAC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCCTTCCAGGGGGACCCTaGGCCCGGGGAGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLLPGGP*ARGAPV
Trigger: CACGGGAGCTCCCCGGGCTCAGGGTCCCCCTGGAAG...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGCACTGGCACCTAGGCTaGAGAAGGTGGAATCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRHWHLG*RRWNPG
Trigger: ACCTGGATTCCACCTTCTGCAGCCTAGGTGCCAGTG...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGTGCAACAGCAGCAGGTaGGGGCACTGGTACAGCGAG +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGCNSSR*GHWYSE
Trigger: CTCGCTGTACCAGTGCCCGCACCTGCTGCTGTTGCA...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGCGGCGAATGGTACAGTaGAGGGGCAGGATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWRRMVQ*RGRMSG
Trigger: CCCAGACATCCTGCCCCTGCACTGTACCATTCGCCG...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGAGCAGGCAGTGGCTGTaGCTGCCCAGGGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWSRQWL*LPRVLE
Trigger: TTCAAGGACCCTGGGCAGGCACAGCCACTGCCTGCT...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGTGTCATGATCCTCTaGAGCAGTGTGTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERSVMIL*SSVSST
Trigger: TGTGGAGGACACACTGCTGCAGAGGATCATGACACT...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAAAGTGCATGGCGGAGTaGTGGATGCAGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEKCMAE*WMQRQR
Trigger: CCTCTGCCTCTGCATCCAGCACTCCGCCATGCACTT...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGTACCCGGCTGGAAGTaGATGGCGGAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWVPGWK*MAECWM
Trigger: CATCCAGCACTCCGCCATGCACTTCCAGCCGGGTAC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGTGCATCTGCAGCTGCTaGAGGAGGTCCAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWCICSC*RRSKVA
Trigger: GGCCACCTTGGACCTCCTGCAGCAGCTGCAGATGCA...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGTGCATCTGCAGCTGCTaGAGGAGGTCCAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGCICSC*RRSKVA
Trigger: GGCCACCTTGGACCTCCTGCAGCAGCTGCAGATGCA...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACCTCAGGATGCATCTaGAGCTGCTGCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQETSGCI*SCCRRS
Trigger: GGACCTCCTGCAGCAGCTGCAGATGCATCCTGAGGT...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAACCTGGCCCATTCCTCTaGCCGTCAAGGACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEPGPFL*PSRTAL
Trigger: AAGAGCAGTCCTTGACGGGCAGAGGAATGGGCCAGG...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGTCGGATCAAATCCACTaGCCTCATGTAGCTGACACC +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERSDQIH*PHVADT
Trigger: GGTGTCAGCTACATGAGGGCAGTGGATTTGATCCGA...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGTCCGGGACAGCATTGTaGATAGGAGCTGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRSGTAL*IGAGSV
Trigger: GACAGAGCCAGCTCCTATCCACAATGCTGTCCCGGA...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGCTAGGCTGCAGAAGGTaGAATCCAGGTCACGATACT +
Preference number: 4 (lower is better)
Translates to: GCEGQGECRGGCWWHLERLGCRR*NPGHDT
Trigger: AGTATCGTGACCTGGATTCCACCTTCTGCAGCCTAG...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAATCTTTCACCAGCTCCTaGGCACTGGAGGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQESFTSS*ALEEPV
Trigger: CACTGGCTCCTCCAGTGCCCAGGAGCTGGTGAAAGA...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGAATACTCGGAAGCACTaGGCCTGCCACCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGNTRKH*ACHRCP
Trigger: TGGGCAGCGGTGGCAGGCCCAGTGCTTCCGAGTATT...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGTGTAGCCTCCGGGCTTaGGCGTTTATCCCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWCSLRA*AFIPAV
Trigger: CACCGCAGGGATAAACGCCCAAGCCCGGAGGCTACA...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCCGGCTGGAAGTGCATaGCGGAGTGCTGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGPAGSA*RSAGCR
Trigger: TCTGCATCCAGCACTCCGCCATGCACTTCCAGCCGG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGCCGGCTGGAAGTGCATaGCGGAGTGCTGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWPAGSA*RSAGCR
Trigger: TCTGCATCCAGCACTCCGCCATGCACTTCCAGCCGG...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGAGCTGGCCCAGGAGATaGGCTCCTGGAGTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWSWPRR*APGVVP
Trigger: AGGCACAACTCCAGGAGCCCATCTCCTGGGCCAGCT...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGACACCTGCACACCCCTaGGCCAATGGAAGCAACTCA +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRTPAHP*ANGSNS
Trigger: TGAGTTGCTTCCATTGGCCCAGGGGTGTGCAGGTGT...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGAGGATGTCCTCTGACTaGAAGGCCTCCGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWRMSSD*KASGPS
Trigger: AGACGGCCCGGAGGCCTTCCAGTCAGAGGACATCCT...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGAGGATGTCCTCTGACTaGAAGGCCTCCGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGRMSSD*KASGPS
Trigger: AGACGGCCCGGAGGCCTTCCAGTCAGAGGACATCCT...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAATCTACCTGGAAGCCCTaGCTCGGCAGAACAATGGGC +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQESTWKP*LGRTMG
Trigger: GCCCATTGTTCTGCCGAGCCAGGGCTTCCAGGTAGA...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGGCTTCCAGGTCTACCTaGAAGCCCTGGCTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGASRST*KPWLGR
Trigger: TCTGCCGAGCCAGGGCTTCCAGGTAGACCTGGAAGC...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGCTCAATCAGTGTCATaGTCCTCTGCAGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRAQSVS*SSAAVC
Trigger: ACACACTGCTGCAGAGGATCATGACACTGATTGAGC...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAATGTCTAGGACCTGGTTaGGGAGCAGTGTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQECLGPG*GAVCQR
Trigger: TCTCTGGCACACTGCTCCTCAACCAGGTCCTAGACA...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAACACTGGCACCTAGGCTaGAGAAGGTGGAATCCAGGT +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEHWHLG*RRWNPG
Trigger: ACCTGGATTCCACCTTCTGCAGCCTAGGTGCCAGTG...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGACACTCTTATAGTGGGTaGCTGTACAGACACTGTCCC +
Preference number: 4 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRHSYSG*LYRHCP
Trigger: GGGACAGTGTCTGTACAGGCACCCACTATAAGAGTG...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGGCATAGCGCTCCAGTaGCTCTTTCACCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWGIALQ*LFHQLL
Trigger: CAGGAGCTGGTGAAAGAGGCACTGGAGCGCTATGCC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGAAGTGCATGGCGGAGTaGTGGATGCAGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGKCMAE*WMQRQR
Trigger: CCTCTGCCTCTGCATCCAGCACTCCGCCATGCACTT...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAACAAAACAGGATGTGCTaGAGGTCGGGAACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEQNRMC*RSGTRS
Trigger: CGACCTGGTTCCCGACCTGCAGCACATCCTGTTTTG...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGGAGTGGCCAGCAGATaGAGGGTGCAGGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWGVASR*RVQESF
Trigger: GAAGCTTTCCTGCACCCTGCATCTGCTGGCCACTCC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGCCTGGCCCATTCCTCTaGCCGTCAAGGACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWPGPFL*PSRTAL
Trigger: AAGAGCAGTCCTTGACGGGCAGAGGAATGGGCCAGG...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATCGGATCAAATCCACTaGCCTCATGTAGCTGACACC +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGSDQIH*PHVADT
Trigger: GGTGTCAGCTACATGAGGGCAGTGGATTTGATCCGA...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACTAGGCTGCAGAAGGTaGAATCCAGGTCACGATACT +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGLGCRR*NPGHDT
Trigger: AGTATCGTGACCTGGATTCCACCTTCTGCAGCCTAG...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAACCAGAGTCCCCAGCTTaGCCCACAACATCACATAGC +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEPESPA*PTTSHS
Trigger: GCTATGTGATGTTGTGGGCCAAGCTGGGGACTCTGG...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCAGGAGGTCCAAGGTaGCCTGGAACACTGACACCA +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWAGGPR*PGTLTP
Trigger: TGGTGTCAGTGTTCCAGGCCACCTTGGACCTCCTGC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGTCTACCTGGAAGCCCTaGCTCGGCAGAACAATGGGC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWSTWKP*LGRTMG
Trigger: GCCCATTGTTCTGCCGAGCCAGGGCTTCCAGGTAGA...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCCTGTCAGGGCTGGCTTaGCCCCGCAGCCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLLSGLA*PRSPHR
Trigger: CCTGTGGGGGCTGCGGGGCCAAGCCAGCCCTGACAG...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGAGGATTTCAACCAGTaGCTGGGGGAAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWEDFNQ*LGEGWS
Trigger: GCTCCAGCCTTCCCCCAGCCACTGGTTGAAATCCTC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085758.10
CDS-3UTR TCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGGGCCCCACGGGCTCTaGGCACCGCACCACACATTC +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLGPHGL*APHHTF
Trigger: GAATGTGTGGTGCGGTGCTCAGAGCCCGTGGGGCCC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGGCTCAATCAGTGTCATaGTCCTCTGCAGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRAQSVS*SSAAVC
Trigger: ACACACTGCTGCAGAGGATCATGACACTGATTGAGC...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGAGCTCGATGGAGTTTaGCATCCAAAACAGGATGTG +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGELDGV*HPKQDV
Trigger: CACATCCTGTTTTGGATGTCAAACTCCATCGAGCTC...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGGGGACTTCTGCTGGATaGAGTACAGGAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGGTSAG*STGARW
Trigger: CCATCGAGCTCCTGTACTTCATCCAGCAGAAGTCCC...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGGGACTTCTGCTGGATaGAGTACAGGAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWGTSAG*STGARW
Trigger: CCATCGAGCTCCTGTACTTCATCCAGCAGAAGTCCC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGTGTCTAGGACCTGGTTaGGGAGCAGTGTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGCLGPG*GAVCQR
Trigger: TCTCTGGCACACTGCTCCTCAACCAGGTCCTAGACA...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCTCCAGCTCCACCATaGACACGTAGCAGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWAPAPP*TRSRSP
Trigger: AGGACTTCTGCTACGTGTTCATGGTGGAGCTGGAGC...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCTGGGCCTGCCACCGCTaGCCAGAGTCCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLWACHR*PESPAW
Trigger: CCAAGCTGGGGACTCTGGGCAGCGGTGGCAGGCCCA...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAGTGTCATGATCCTCTaGAGCAGTGTGTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRSVMIL*SSVSST
Trigger: TGTGGAGGACACACTGCTGCAGAGGATCATGACACT...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGCCAGCAGATGCAGGGTaGAGGAAAGCTTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWPADAG*RKASGR
Trigger: TCTTCCGGAAGCTTTCCTGCACCCTGCATCTGCTGG...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACCAGCCGCCCATCAGATaGCGCGGGGCTCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDQPPIR*RGAPGK
Trigger: CTTCCCGGGAGCCCCGCGGCATCTGATGGGCGGCTG...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGTCGGATCAAATCCACTaGCCTCATGTAGCTGACACC +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRSDQIH*PHVADT
Trigger: GGTGTCAGCTACATGAGGGCAGTGGATTTGATCCGA...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGTCCGGGACAGCATTGTaGATAGGAGCTGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWSGTAL*IGAGSV
Trigger: GACAGAGCCAGCTCCTATCCACAATGCTGTCCCGGA...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCCAGAGTCCCCAGCTTaGCCCACAACATCACATAGC +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGPESPA*PTTSHS
Trigger: GCTATGTGATGTTGTGGGCCAAGCTGGGGACTCTGG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGAGCGGGGACTTCTGCTaGATGAAGTACAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGSGDFC*MKYRSS
Trigger: CGAGCTCCTGTACTTCATCCAGCAGAAGTCCCCGCT...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGACACCTGCACACCCCTaGGCCAATGGAAGCAACTCA +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWTPAHP*ANGSNS
Trigger: TGAGTTGCTTCCATTGGCCCAGGGGTGTGCAGGTGT...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACCTGTCAGGGCTGGCTTaGCCCCGCAGCCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDLSGLA*PRSPHR
Trigger: CCTGTGGGGGCTGCGGGGCCAAGCCAGCCCTGACAG...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCCCTCAGCGCTGGAGCTaGGGCTGGAGGCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLPQRWS*GWRPQQ
Trigger: CTGCTGAGGCCTCCAGCCCCAGCTCCAGCGCTGAGG...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGTTCACCTCCAGGATTTaGTCTCCGAGTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWFTSRI*SPSDSR
Trigger: GCGGCTGTCACTCGGAGACCAAATCCTGGAGGTGAA...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACGGGCCCCACGGGCTCTaGGCACCGCACCACACATTC +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDGPHGL*APHHTF
Trigger: GAATGTGTGGTGCGGTGCTCAGAGCCCGTGGGGCCC...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTCTTCCAGGGGGACCCTaGGCCCGGGGAGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGLPGGP*ARGAPV
Trigger: CACGGGAGCTCCCCGGGCTCAGGGTCCCCCTGGAAG...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAAGTGTCATGATCCTCTaGAGCAGTGTGTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQESVMIL*SSVSST
Trigger: TGTGGAGGACACACTGCTGCAGAGGATCATGACACT...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGCCCACTCCAGGAACTaGTGCAGGCGGGCACACACC +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLAHSRN*CRRAHT
Trigger: GGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTGGGC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGCAGCCGCCCATCAGATaGCGCGGGGCTCCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVQPPIR*RGAPGK
Trigger: CTTCCCGGGAGCCCCGCGGCATCTGATGGGCGGCTG...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGGGTTTCCATAACTCCTaGATCAAGAGGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRGFHNS*IKRGFS
Trigger: TGAGAAGCCCCTCTTGATCCAGGAGTTATGGAAACC...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGGCACAAGCAGGCAGTaGCTGTGCCTGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLGTSRQ*LCLPRV
Trigger: GACCCTGGGCAGGCACAGCCACTGCCTGCTTGTGCC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGCTGTCAGGGCTGGCTTaGCCCCGCAGCCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVLSGLA*PRSPHR
Trigger: CCTGTGGGGGCTGCGGGGCCAAGCCAGCCCTGACAG...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCTGCCTGGGTCCCTATTaGCCAGGGGGCAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLCLGPY*PGGSHG
Trigger: GCCATGGCTGCCCCCTGGCCAATAGGGACCCAGGCA...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTTCCACAGAGGCCGCTaGGCTCTGGCCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDFHRGR*ALASWG
Trigger: GCCCCAGCTGGCCAGAGCCCAGCGGCCTCTGTGGAA...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCTTAGGCTGGTCTCGCTaGCTGTACGGCGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLLGWSR*LYGAAW
Trigger: CCAGGCTGCGCCGTACAGTCAGCGAGACCAGCCTAA...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACAAACTCCAGGAGCAGTaGCCGCCGCCGGACCACAGC +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDKLQEQ*PPPDHS
Trigger: GCTGTGGTCCGGCGGCGGTCACTGCTCCTGGAGTTT...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCCTCATCTGGATGAGCTaGGCCCTGGGAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLLIWMS*ALGVAS
Trigger: GCTGGCCACTCCCAGGGCTCAGCTCATCCAGATGAG...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGGCAGTGGCTGTGCCTaGCCAGGGTCCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLGSGCA*PGSLNS
Trigger: GCTGTTCAAGGACCCTGGGCAGGCACAGCCACTGCC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACAGGCGGGCACACACCTaGACACCCCTGGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDRRAHT*TPLGQW
Trigger: CCATTGGCCCAGGGGTGTGCAGGTGTGTGCCCGCCT...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGTCGGATCAAATCCACTaGCCTCATGTAGCTGACACC +
Preference number: 4 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWSDQIH*PHVADT
Trigger: GGTGTCAGCTACATGAGGGCAGTGGATTTGATCCGA...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAAGTACAGGAGCTCGATaGAGTTTGACATCCAAAACA +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGSTGAR*SLTSKT
Trigger: TGTTTTGGATGTCAAACTCCATCGAGCTCCTGTACT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAAGACATACAAGCACTTaGAGAGGTAATACACGCACT +
Preference number: 4 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGRHTST*RGNTRT
Trigger: AGTGCGTGTATTACCTCTCCAAGTGCTTGTATGTCT...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGTTCCACAGAGGCCGCTaGGCTCTGGCCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVFHRGR*ALASWG
Trigger: GCCCCAGCTGGCCAGAGCCCAGCGGCCTCTGTGGAA...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCAGAAGTCCTCAGCGCTaGAGCTGGGGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLRSPQR*SWGWRP
Trigger: AGGCCTCCAGCCCCAGCTCCAGCGCTGAGGACTTCT...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGAAACTCCAGGAGCAGTaGCCGCCGCCGGACCACAGC +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVKLQEQ*PPPDHS
Trigger: GCTGTGGTCCGGCGGCGGTCACTGCTCCTGGAGTTT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCCGGCGAATGGTACAGTaGAGGGGCAGGATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLRRMVQ*RGRMSG
Trigger: CCCAGACATCCTGCCCCTGCACTGTACCATTCGCCG...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCAGCAGGCAGTGGCTGTaGCTGCCCAGGGTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLSRQWL*LPRVLE
Trigger: TTCAAGGACCCTGGGCAGGCACAGCCACTGCCTGCT...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCCGCTGGCCGTCAGTGTaGAGGAGAACAGCGACTCCT +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLRWPSV*RRTATP
Trigger: AGGAGTCGCTGTTCTCCTGCACACTGACGGCCAGCG...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGAGGCCACCTCAGGATaGATCTGCAGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLEATSG*ICSCCR
Trigger: CCTGCAGCAGCTGCAGATGCATCCTGAGGTGGCCTC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGATTGTGGATAGGAGCTaGCTCTGTCGCTTCAGCTTA +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGIVDRS*LCRFSL
Trigger: TAAGCTGAAGCGACAGAGCCAGCTCCTATCCACAAT...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGGGTTTCCATAACTCCTaGATCAAGAGGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGGFHNS*IKRGFS
Trigger: TGAGAAGCCCCTCTTGATCCAGGAGTTATGGAAACC...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAGACATACAAGCACTTaGAGAGGTAATACACGCACT +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRRHTST*RGNTRT
Trigger: AGTGCGTGTATTACCTCTCCAAGTGCTTGTATGTCT...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGCTTCCAGGTCTACCTaGAAGCCCTGGCTCGGCAGA +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLASRST*KPWLGR
Trigger: TCTGCCGAGCCAGGGCTTCCAGGTAGACCTGGAAGC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGCTCATCTGGATGAGCTaGGCCCTGGGAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVLIWMS*ALGVAS
Trigger: GCTGGCCACTCCCAGGGCTCAGCTCATCCAGATGAG...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGCCCAGCTCATCTGGATaGGCTGAGCCCTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVPSSSG*AEPWEW
Trigger: CCACTCCCAGGGCTCAGCTCATCCAGATGAGCTGGG...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTCTCCAGGATGTCCTCTaGCTGGAAGGCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGLQDVL*LEGLRA
Trigger: GGCCCGGAGGCCTTCCAGTCAGAGGACATCCTGGAG...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGCTGCCCTCATGTAGCTaGCACCCCTCAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVLPSCS*HPSGCC
Trigger: GCAGCAGCCTGAGGGGTGTCAGCTACATGAGGGCAG...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCAAGTGCATGGCGGAGTaGTGGATGCAGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLKCMAE*WMQRQR
Trigger: CCTCTGCCTCTGCATCCAGCACTCCGCCATGCACTT...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGGATGCATCTGCAGCTaGTGCAGGAGGTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLGCICS*CRRSKV
Trigger: CACCTTGGACCTCCTGCAGCAGCTGCAGATGCATCC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCACCTCAGGATGCATCTaGAGCTGCTGCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLTSGCI*SCCRRS
Trigger: GGACCTCCTGCAGCAGCTGCAGATGCATCCTGAGGT...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACGAGGCCACCTCAGGATaGATCTGCAGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDEATSG*ICSCCR
Trigger: CCTGCAGCAGCTGCAGATGCATCCTGAGGTGGCCTC...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGCACTCCAGGAACTGCTaGAGGCGGGCACACACCTGC +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVHSRNC*RRAHTC
Trigger: GCAGGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTG...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACCTGCCCGTCAAGGACTaGTCTTCCACAGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDLPVKD*SSTEAA
Trigger: AGCGGCCTCTGTGGAAGAGCAGTCCTTGACGGGCAG...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCCCTGGCCCATTCCTCTaGCCGTCAAGGACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLPGPFL*PSRTAL
Trigger: AAGAGCAGTCCTTGACGGGCAGAGGAATGGGCCAGG...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCTCTTTCACCAGCTCCTaGGCACTGGAGGAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLSFTSS*ALEEPV
Trigger: CACTGGCTCCTCCAGTGCCCAGGAGCTGGTGAAAGA...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGGCACAAGCAGGCAGTaGCTGTGCCTGCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGGTSRQ*LCLPRV
Trigger: GACCCTGGGCAGGCACAGCCACTGCCTGCTTGTGCC...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTGCATGGCGGAGTGCTaGATGCAGAGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDCMAEC*MQRQRR
Trigger: CCTCCTCTGCCTCTGCATCCAGCACTCCGCCATGCA...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTTGCCTGGGTCCCTATTaGCCAGGGGGCAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGCLGPY*PGGSHG
Trigger: GCCATGGCTGCCCCCTGGCCAATAGGGACCCAGGCA...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGACCAGGCAGACCACCTaGCCCATTCCTCTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVTRQTT*PIPLPV
Trigger: GACGGGCAGAGGAATGGGCCAGGTGGTCTGCCTGGT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGAGAAGTCCTCAGCGCTaGAGCTGGGGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVRSPQR*SWGWRP
Trigger: AGGCCTCCAGCCCCAGCTCCAGCGCTGAGGACTTCT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGAGCAGCTTCAGAGGTaGGGGCTGGGGTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGEQLQR*GLGFPW
Trigger: CCAAGGGAACCCCAGCCCTCACCTCTGAAGCTGCTC...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGGTCGGTGGGGAGCTTTaGGCAGCTTCAGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVVGGEL*AASEVR
Trigger: CCTCACCTCTGAAGCTGCTCAAAGCTCCCCACCGAC...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGGGACTTCTGCTGGATaGAGTACAGGAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLGTSAG*STGARW
Trigger: CCATCGAGCTCCTGTACTTCATCCAGCAGAAGTCCC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCTGTCTAGGACCTGGTTaGGGAGCAGTGTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLCLGPG*GAVCQR
Trigger: TCTCTGGCACACTGCTCCTCAACCAGGTCCTAGACA...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGAAGGTGGACAGACGTTaGGGCCCAGAGGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVKVDRR*GPEEGM
Trigger: CATCCCCTCCTCTGGGCCTCAACGTCTGTCCACCTT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGGCAGTGGCTGTGCCTaGCCAGGGTCCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGGSGCA*PGSLNS
Trigger: GCTGTTCAAGGACCCTGGGCAGGCACAGCCACTGCC...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCATCTTGAGCAGGAGATaGCTGAAGGTACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLILSRR*LKVPGW
Trigger: CCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGAT...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGGAGGCCACCTCAGGATaGATCTGCAGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVEATSG*ICSCCR
Trigger: CCTGCAGCAGCTGCAGATGCATCCTGAGGTGGCCTC...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGCTGCCCGTCAAGGACTaGTCTTCCACAGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVLPVKD*SSTEAA
Trigger: AGCGGCCTCTGTGGAAGAGCAGTCCTTGACGGGCAG...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGTGTAGCCTCCGGGCTTaGGCGTTTATCCCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVCSLRA*AFIPAV
Trigger: CACCGCAGGGATAAACGCCCAAGCCCGGAGGCTACA...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGAGCTGGCCCAGGAGATaGGCTCCTGGAGTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVSWPRR*APGVVP
Trigger: AGGCACAACTCCAGGAGCCCATCTCCTGGGCCAGCT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGAGTACAGGAGCTCGATaGAGTTTGACATCCAAAACA +
Preference number: 4 (lower is better)
Translates to: CRGGCWWHLERIQETGGGSTGAR*SLTSKT
Trigger: TGTTTTGGATGTCAAACTCCATCGAGCTCCTGTACT...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGAGGATGTCCTCTGACTaGAAGGCCTCCGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVRMSSD*KASGPS
Trigger: AGACGGCCCGGAGGCCTTCCAGTCAGAGGACATCCT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTACCAGGCAGACCACCTaGCCCATTCCTCTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGTRQTT*PIPLPV
Trigger: GACGGGCAGAGGAATGGGCCAGGTGGTCTGCCTGGT...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCTTCACCTCCAGGATTTaGTCTCCGAGTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLFTSRI*SPSDSR
Trigger: GCGGCTGTCACTCGGAGACCAAATCCTGGAGGTGAA...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGTTTCCATGTCAGACTTaGCAACTAAAAATCGCATCT +
Preference number: 4 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRFPCQT*QLKIAS
Trigger: AGATGCGATTTTTAGTTGCCAAGTCTGACATGGAAA...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTCGGTGGGGAGCTTTaGGCAGCTTCAGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGVGGEL*AASEVR
Trigger: CCTCACCTCTGAAGCTGCTCAAAGCTCCCCACCGAC...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACCACTGGCACCTAGGCTaGAGAAGGTGGAATCCAGGT +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDHWHLG*RRWNPG
Trigger: ACCTGGATTCCACCTTCTGCAGCCTAGGTGCCAGTG...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTCGGCGAATGGTACAGTaGAGGGGCAGGATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGRRMVQ*RGRMSG
Trigger: CCCAGACATCCTGCCCCTGCACTGTACCATTCGCCG...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTACCCGGCTGGAAGTaGATGGCGGAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGVPGWK*MAECWM
Trigger: CATCCAGCACTCCGCCATGCACTTCCAGCCGGGTAC...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTTGCATCTGCAGCTGCTaGAGGAGGTCCAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGCICSC*RRSKVA
Trigger: GGCCACCTTGGACCTCCTGCAGCAGCTGCAGATGCA...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGCAGGTGCTGGTAGATaGTGTCCTCCACGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGAGAGR*CPPRSR
Trigger: CCGACTGCGTGGAGGACAGCATCTACCAGCACCTGC...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTCTGCCCGTCAAGGACTaGTCTTCCACAGAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGLPVKD*SSTEAA
Trigger: AGCGGCCTCTGTGGAAGAGCAGTCCTTGACGGGCAG...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTTGCATGGCGGAGTGCTaGATGCAGAGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGCMAEC*MQRQRR
Trigger: CCTCCTCTGCCTCTGCATCCAGCACTCCGCCATGCA...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTCCGGCTGGAAGTGCATaGCGGAGTGCTGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGPAGSA*RSAGCR
Trigger: TCTGCATCCAGCACTCCGCCATGCACTTCCAGCCGG...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGGCAGGAGGTCCAAGGTaGCCTGGAACACTGACACCA +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVAGGPR*PGTLTP
Trigger: TGGTGTCAGTGTTCCAGGCCACCTTGGACCTCCTGC...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAATTTCCATGTCAGACTTaGCAACTAAAAATCGCATCT +
Preference number: 4 (lower is better)
Translates to: GQGECRGGCWWHLERIQEFPCQT*QLKIAS
Trigger: AGATGCGATTTTTAGTTGCCAAGTCTGACATGGAAA...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGCCTGGGAAGAGAAGGTaGACAGACGTTGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVPGKRR*TDVEAQ
Trigger: CTGGGCCTCAACGTCTGTCCACCTTCTCTTCCCAGG...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGTCACATAGCACGTACTaGCCAGCACACTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVSHSTY*PAHSGS
Trigger: GGACCCTGAGTGTGCTGGCCAGTACGTGCTATGTGA...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGACACCTGCACACCCCTaGGCCAATGGAAGCAACTCA +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVTPAHP*ANGSNS
Trigger: TGAGTTGCTTCCATTGGCCCAGGGGTGTGCAGGTGT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACGCTCAATCAGTGTCATaGTCCTCTGCAGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDAQSVS*SSAAVC
Trigger: ACACACTGCTGCAGAGGATCATGACACTGATTGAGC...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTTGTCTAGGACCTGGTTaGGGAGCAGTGTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGCLGPG*GAVCQR
Trigger: TCTCTGGCACACTGCTCCTCAACCAGGTCCTAGACA...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTATCTTGAGCAGGAGATaGCTGAAGGTACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGILSRR*LKVPGW
Trigger: CCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGAT...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGGTTTCCATAACTCCTaGATCAAGAGGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLGFHNS*IKRGFS
Trigger: TGAGAAGCCCCTCTTGATCCAGGAGTTATGGAAACC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGCACTCTTATAGTGGGTaGCTGTACAGACACTGTCCC +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVHSYSG*LYRHCP
Trigger: GGGACAGTGTCTGTACAGGCACCCACTATAAGAGTG...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR TCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGGAGCTCGATGGAGTTTaGCATCCAAAACAGGATGTG +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVELDGV*HPKQDV
Trigger: CACATCCTGTTTTGGATGTCAAACTCCATCGAGCTC...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR GCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTCACTCTTATAGTGGGTaGCTGTACAGACACTGTCCC +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGHSYSG*LYRHCP
Trigger: GGGACAGTGTCTGTACAGGCACCCACTATAAGAGTG...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGATTGTGGATAGGAGCTaGCTCTGTCGCTTCAGCTTA +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVIVDRS*LCRFSL
Trigger: TAAGCTGAAGCGACAGAGCCAGCTCCTATCCACAAT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTCTAGGCTGCAGAAGGTaGAATCCAGGTCACGATACT +
Preference number: 4 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGLGCRR*NPGHDT
Trigger: AGTATCGTGACCTGGATTCCACCTTCTGCAGCCTAG...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACAGTACAGGAGCTCGATaGAGTTTGACATCCAAAACA +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDSTGAR*SLTSKT
Trigger: TGTTTTGGATGTCAAACTCCATCGAGCTCCTGTACT...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACAGACATACAAGCACTTaGAGAGGTAATACACGCACT +
Preference number: 4 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDRHTST*RGNTRT
Trigger: AGTGCGTGTATTACCTCTCCAAGTGCTTGTATGTCT...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGAGTACAGGAGCTCGATaGAGTTTGACATCCAAAACA +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVSTGAR*SLTSKT
Trigger: TGTTTTGGATGTCAAACTCCATCGAGCTCCTGTACT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGAGACATACAAGCACTTaGAGAGGTAATACACGCACT +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVRHTST*RGNTRT
Trigger: AGTGCGTGTATTACCTCTCCAAGTGCTTGTATGTCT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CCA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGTTTCCATGTCAGACTTaGCAACTAAAAATCGCATCT +
Preference number: 4 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVFPCQT*QLKIAS
Trigger: AGATGCGATTTTTAGTTGCCAAGTCTGACATGGAAA...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGCTGCCTGGGTCCCTATaGGCCAGGGGGCAGCCATGG +
Preference number: 5 (lower is better)
Translates to: GCEGQGECRGGCWWHLERLPGSL*ARGQPW
Trigger: CCATGGCTGCCCCCTGGCCAATAGGGACCCAGGCAG...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp TGCACCAGGCAGACCACCTGGCCCATTCCTCTGCCCGTCAAGGACTaGTCTTCCACAGAGGCCGCTGGGCTCTGGCCAGCTGGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: CTRQTTWPIPLPVKD*SSTEAAGLWPAGAC
Trigger: GCAGGCCCCAGCTGGCCAGAGCCCAGCGGCCTCTGTGGAAGAGCAGTCCTTGACGGGCAGAGGAATGGGCCAGGTGGTCTGCCTGGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp GCACTCCGGGCCCACTCCAGGAACTGCTGCAGGCGGGCACACACCTaGACACCCCTGGGCCAATGGAAGCAACTCAGAGAGGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: ALRAHSRNCCRRAHT*TPLGQWKQLREGPL
Trigger: CAAGGGGCCCTCTCTGAGTTGCTTCCATTGGCCCAGGGGTGTGCAGGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTGGGCCCGGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp GCAGGTGCTCCAAGGCCAGCACTCCGGGCCCACTCCAGGAACTGCTaGAGGCGGGCACACACCTGCACACCCCTGGGCCAATGGAAGCAA +
Preference number: 5 (lower is better)
Translates to: AGAPRPALRAHSRNC*RRAHTCTPLGQWKQ
Trigger: TTGCTTCCATTGGCCCAGGGGTGTGCAGGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTGGGCCCGGAGTGCTGGCCTTGGAGCACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp TCAGCAGGTGCTCCAAGGCCAGCACTCCGGGCCCACTCCAGGAACTaGTGCAGGCGGGCACACACCTGCACACCCCTGGGCCAATGGAAG +
Preference number: 5 (lower is better)
Translates to: SAGAPRPALRAHSRN*CRRAHTCTPLGQWK
Trigger: CTTCCATTGGCCCAGGGGTGTGCAGGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTGGGCCCGGAGTGCTGGCCTTGGAGCACCTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACTGTCAGGGCTGGCTaGGCCCCGCAGCCCCCACAG +
Preference number: 5 (lower is better)
Translates to: GQGECRGGCWWHLERIQETVRAG*APQPPQ
Trigger: CTGTGGGGGCTGCGGGGCCAAGCCAGCCCTGACAGT...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGCTGCCTGGGTCCCTATaGGCCAGGGGGCAGCCATGG +
Preference number: 5 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRLPGSL*ARGQPW
Trigger: CCATGGCTGCCCCCTGGCCAATAGGGACCCAGGCAG...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS TCA 90 bp ACCCCTCAGGCTGCTGCCATTCACCTCCAGGATTTGGTCTCCGAGTaGCAGCCGCCCATCAGATGCCGCGGGGCTCCCGGGAAGCAGGGT +
Preference number: 5 (lower is better)
Translates to: TPQAAAIHLQDLVSE*QPPIRCRGAPGKQG
Trigger: ACCCTGCTTCCCGGGAGCCCCGCGGCATCTGATGGGCGGCTGTCACTCGGAGACCAAATCCTGGAGGTGAATGGCAGCAGCCTGAGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGCTCAGAGAGGGCCCCTaGTCTAGGACCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GCEGQGECRGGCWWHLERLREGP*SRTWLR
Trigger: CCTCAACCAGGTCCTAGACAAGGGGCCCTCTCTGAG...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGACTGTCAGGGCTGGCTaGGCCCCGCAGCCCCCACAG +
Preference number: 5 (lower is better)
Translates to: CRGGCWWHLERIQETGGGTVRAG*APQPPQ
Trigger: CTGTGGGGGCTGCGGGGCCAAGCCAGCCCTGACAGT...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS TCA 90 bp TGGACAGACGTTGAGGCCCAGAGGAGGGGATGGCCCAGGTATCCATaGTGGCTCCCTCGATGCTCTCGGGCTGGGCAGGCCCACTGTCAG +
Preference number: 5 (lower is better)
Translates to: WTDVEAQRRGWPRYP*WLPRCSRAGQAHCQ
Trigger: CTGACAGTGGGCCTGCCCAGCCCGAGAGCATCGAGGGAGCCATCATGGATACCTGGGCCATCCCCTCCTCTGGGCCTCAACGTCTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110785.2
CDS GCA 90 bp TGGTGCCGCCCCAAGACGGGCGAGGGCACAAGCAGGCAGTGGCTGTaGCTGCCCAGGGTCCTTGAACAGCAGCAGGTAATAGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: WCRPKTGEGTSRQWL*LPRVLEQQQVIETQ
Trigger: CTGGGTCTCTATTACCTGCTGCTGTTCAAGGACCCTGGGCAGGCACAGCCACTGCCTGCTTGTGCCCTCGCCCGTCTTGGGGCGGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp CCTGCAACAGCAGCAGGTGCGGGCACTGGTACAGCGAGTAACGCATaGCCTCAGGGACGGGCTCCTCAGGCCTCTGAGCAGCCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: PATAAGAGTGTASNA*PQGRAPQASEQPQV
Trigger: TACCTGAGGCTGCTCAGAGGCCTGAGGAGCCCGTCCCTGAGGCCATGCGTTACTCGCTGTACCAGTGCCCGCACCTGCTGCTGTTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGGTCGGTGGGGAGCTTaGAGCAGCTTCAGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGGRWGA*SSFRGE
Trigger: CTCACCTCTGAAGCTGCTCAAAGCTCCCCACCGACC...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS TCA 90 bp CTGGTCTCGCTGACTGTACGGCGCAGCCTGGTCGGTGGGGAGCTTTaGGCAGCTTCAGAGGTGAGGGCTGGGGTTCCCTTGGCACGGATA +
Preference number: 5 (lower is better)
Translates to: LVSLTVRRSLVGGEL*AASEVRAGVPLARI
Trigger: TATCCGTGCCAAGGGAACCCCAGCCCTCACCTCTGAAGCTGCTCAAAGCTCCCCACCGACCAGGCTGCGCCGTACAGTCAGCGAGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000139278.2
CDS TCA 90 bp GAGCAGCCTCAGGTAGCGATGGTGCTGGGCTTAGGCTGGTCTCGCTaGCTGTACGGCGCAGCCTGGTCGGTGGGGAGCTTTGAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: EQPQVAMVLGLGWSR*LYGAAWSVGSFEQL
Trigger: AAGCTGCTCAAAGCTCCCCACCGACCAGGCTGCGCCGTACAGTCAGCGAGACCAGCCTAAGCCCAGCACCATCGCTACCTGAGGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000139278.2
CDS GCA 90 bp TCTCCTTCTAGGACTGCACCAGGCAGACCACCTGGCCCATTCCTCTaGCCGTCAAGGACTGCTCTTCCACAGAGGCCGCTGGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SPSRTAPGRPPGPFL*PSRTALPQRPLGSG
Trigger: GCCAGAGCCCAGCGGCCTCTGTGGAAGAGCAGTCCTTGACGGGCAGAGGAATGGGCCAGGTGGTCTGCCTGGTGCAGTCCTAGAAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp AGGCCACCTCAGGATGCATCTGCAGCTGCTGCAGGAGGTCCAAGGTaGCCTGGAACACTGACACCACTCGCCGAAGCTCCTCGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: RPPQDASAAAAGGPR*PGTLTPLAEAPRAE
Trigger: CTCTGCCCGAGGAGCTTCGGCGAGTGGTGTCAGTGTTCCAGGCCACCTTGGACCTCCTGCAGCAGCTGCAGATGCATCCTGAGGTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp CCCACTCCAGGAACTGCTGCAGGCGGGCACACACCTGCACACCCCTaGGCCAATGGAAGCAACTCAGAGAGGGCCCCTTGTCTAGGACCT +
Preference number: 5 (lower is better)
Translates to: PTPGTAAGGHTPAHP*ANGSNSERAPCLGP
Trigger: AGGTCCTAGACAAGGGGCCCTCTCTGAGTTGCTTCCATTGGCCCAGGGGTGTGCAGGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGAGTGTCCGGGACAGCATaGTGGATAGGAGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGVSGTA*WIGAGS
Trigger: AGAGCCAGCTCCTATCCACAATGCTGTCCCGGACAC...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS GCA 90 bp GCAGCCCCCACAGGAAGTGGCGGATGTAGAGCAGGTGCTGGTAGATaGTGTCCTCCACGCAGTCGGCTTCCAGGTCTACCTGGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: AAPTGSGGCRAGAGR*CPPRSRLPGLPGSP
Trigger: AGGGCTTCCAGGTAGACCTGGAAGCCGACTGCGTGGAGGACAGCATCTACCAGCACCTGCTCTACATCCGCCACTTCCTGTGGGGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp AGGGCTGGGGTTCCCTTGGCACGGATACGCTGTAGCCTCCGGGCTTaGGCGTTTATCCCTGCGGTGGTGGTATCCACATCCCTCGATGCA +
Preference number: 5 (lower is better)
Translates to: RAGVPLARIRCSLRA*AFIPAVVVSTSLDA
Trigger: TGCATCGAGGGATGTGGATACCACCACCGCAGGGATAAACGCCCAAGCCCGGAGGCTACAGCGTATCCGTGCCAAGGGAACCCCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS CCA 90 bp ACCTCAGGATGCATCTGCAGCTGCTGCAGGAGGTCCAAGGTGGCCTaGAACACTGACACCACTCGCCGAAGCTCCTCGGGCAGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: TSGCICSCCRRSKVA*NTDTTRRSSSGRAG
Trigger: TCCAGCTCTGCCCGAGGAGCTTCGGCGAGTGGTGTCAGTGTTCCAGGCCACCTTGGACCTCCTGCAGCAGCTGCAGATGCATCCTGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp CTGCCTGGGTCCCTATTGGCCAGGGGGCAGCCATGGCCTTCCAGATaGCCCTCAGGAATTGTGTGGTACAGGCCCTGGGAAGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LPGSLLARGQPWPSR*PSGIVWYRPWEEKV
Trigger: CACCTTCTCTTCCCAGGGCCTGTACCACACAATTCCTGAGGGCCATCTGGAAGGCCATGGCTGCCCCCTGGCCAATAGGGACCCAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAGCTGATGCTGGGTTaGCTAGACGGTGTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRKLMLG*LDGVRW
Trigger: CCAGCGCACACCGTCTAGCAAACCCAGCATCAGCTT...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATTGTCTAGGACCTGGTaGAGGAGCAGTGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGLSRTW*RSSVPE
Trigger: CTCTGGCACACTGCTCCTCAACCAGGTCCTAGACAA...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp AAGCTGATGCTGGGTTTGCTAGACGGTGTGCGCTGGCCCACTGTGTaGCGTTCCTTGCTGAGCACGTACACCAGGCTGTCGTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KLMLGLLDGVRWPTV*RSLLSTYTRLSCCW
Trigger: CCAGCAGCACGACAGCCTGGTGTACGTGCTCAGCAAGGAACGGCACACAGTGGGCCAGCGCACACCGTCTAGCAAACCCAGCATCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp TCTGGGGCAGACAAGCTGATGCTGGGTTTGCTAGACGGTGTGCGCTaGCCCACTGTGTGCCGTTCCTTGCTGAGCACGTACACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SGADKLMLGLLDGVR*PTVCRSLLSTYTRL
Trigger: CAGCCTGGTGTACGTGCTCAGCAAGGAACGGCACACAGTGGGCCAGCGCACACCGTCTAGCAAACCCAGCATCAGCTTGTCTGCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp TGGGGACTGATGGCGGCGAATGGTACAGTGCAGGGGCAGGATGTCTaGGGCAGACAAGCTGATGCTGGGTTTGCTAGACGGTGTGCGCTG +
Preference number: 5 (lower is better)
Translates to: WGLMAANGTVQGQDV*GRQADAGFARRCAL
Trigger: CAGCGCACACCGTCTAGCAAACCCAGCATCAGCTTGTCTGCCCCAGACATCCTGCCCCTGCACTGTACCATTCGCCGCCATCAGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp AGGAGATGCCTGAAGGTACCCGGCTGGAAGTGCATGGCGGAGTGCTaGATGCAGAGGCAGAGGAGGAAGGCAGGTGTCAGCTTGTGGTCG +
Preference number: 5 (lower is better)
Translates to: RRCLKVPGWKCMAEC*MQRQRRKAGVSLWS
Trigger: CGACCACAAGCTGACACCTGCCTTCCTCCTCTGCCTCTGCATCCAGCACTCCGCCATGCACTTCCAGCCGGGTACCTTCAGGCATCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACCCTTTTGGAGATCTaGAGCAGGAGATGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: GCEGQGECRGGCWWHLERTLLEI*SRRCLK
Trigger: CTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGT...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGTTGTCTAGGACCTGGTaGAGGAGCAGTGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRLSRTW*RSSVPE
Trigger: CTCTGGCACACTGCTCCTCAACCAGGTCCTAGACAA...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCTCAGAGAGGGCCCCTaGTCTAGGACCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: CRGGCWWHLERIQETGGGLREGP*SRTWLR
Trigger: CCTCAACCAGGTCCTAGACAAGGGGCCCTCTCTGAG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGCTCAGAGAGGGCCCCTaGTCTAGGACCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWLREGP*SRTWLR
Trigger: CCTCAACCAGGTCCTAGACAAGGGGCCCTCTCTGAG...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp AGCGACTCCTTGGAGCCTGTGACGTCCAGCTCCTCCTCCATGCTCTaGACGTACAGCGGGGACTTCTGCTGGATGAAGTACAGGAGCTCG +
Preference number: 5 (lower is better)
Translates to: SDSLEPVTSSSSSML*TYSGDFCWMKYRSS
Trigger: CGAGCTCCTGTACTTCATCCAGCAGAAGTCCCCGCTGTACGTGCAGAGCATGGAGGAGGAGCTGGACGTCACAGGCTCCAAGGAGTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp CCAGGGCATAGCGCTCCAGTGCCTCTTTCACCAGCTCCTGGGCACTaGAGGAGCCAGTGGCCAAGACACTCTTATAGTGGGTGCCTGTAC +
Preference number: 5 (lower is better)
Translates to: PGHSAPVPLSPAPGH*RSQWPRHSYSGCLY
Trigger: GTACAGGCACCCACTATAAGAGTGTCTTGGCCACTGGCTCCTCCAGTGCCCAGGAGCTGGTGAAAGAGGCACTGGAGCGCTATGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS CCA 90 bp GATGGCCCTCAGGAATTGTGTGGTACAGGCCCTGGGAAGAGAAGGTaGACAGACGTTGAGGCCCAGAGGAGGGGATGGCCCAGGTATCCA +
Preference number: 5 (lower is better)
Translates to: DGPQELCGTGPGKRR*TDVEAQRRGWPRYP
Trigger: TGGATACCTGGGCCATCCCCTCCTCTGGGCCTCAACGTCTGTCCACCTTCTCTTCCCAGGGCCTGTACCACACAATTCCTGAGGGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGACGCTTCAGCTTATTCTaGGTGGGAGGAGACATGATC +
Preference number: 5 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGRFSLF*VGGDMI
Trigger: GATCATGTCTCCTCCCACCAAGAATAAGCTGAAGCG...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGAAGCTGATGCTGGGTTaGCTAGACGGTGTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWKLMLG*LDGVRW
Trigger: CCAGCGCACACCGTCTAGCAAACCCAGCATCAGCTT...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGGGAGCTCGATGGAGTTaGACATCCAAAACAGGATGT +
Preference number: 5 (lower is better)
Translates to: GCEGQGECRGGCWWHLERGARWS*TSKTGC
Trigger: ACATCCTGTTTTGGATGTCAAACTCCATCGAGCTCC...CCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAATTGTCTAGGACCTGGTaGAGGAGCAGTGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: GQGECRGGCWWHLERIQELSRTW*RSSVPE
Trigger: CTCTGGCACACTGCTCCTCAACCAGGTCCTAGACAA...TTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp TTGGAGATCTTGAGCAGGAGATGCCTGAAGGTACCCGGCTGGAAGTaGATGGCGGAGTGCTGGATGCAGAGGCAGAGGAGGAAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: LEILSRRCLKVPGWK*MAECWMQRQRRKAG
Trigger: ACCTGCCTTCCTCCTCTGCCTCTGCATCCAGCACTCCGCCATGCACTTCCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGATCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp GCTCCAGTGCCTCTTTCACCAGCTCCTGGGCACTGGAGGAGCCAGTaGCCAAGACACTCTTATAGTGGGTGCCTGTACAGACACTGTCCC +
Preference number: 5 (lower is better)
Translates to: APVPLSPAPGHWRSQ*PRHSYSGCLYRHCP
Trigger: GGGACAGTGTCTGTACAGGCACCCACTATAAGAGTGTCTTGGCCACTGGCTCCTCCAGTGCCCAGGAGCTGGTGAAAGAGGCACTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS CCA 90 bp GAGTGCTGGATGCAGAGGCAGAGGAGGAAGGCAGGTGTCAGCTTGTaGTCGTCACCCCCAGGCTCAATCAGTGTCATGATCCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ECWMQRQRRKAGVSL*SSPPGSISVMILCS
Trigger: GCTGCAGAGGATCATGACACTGATTGAGCCTGGGGGTGACGACCACAAGCTGACACCTGCCTTCCTCCTCTGCCTCTGCATCCAGCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp AGTCGGCTTCCAGGTCTACCTGGAAGCCCTGGCTCGGCAGAACAATaGGCGGCGGGTTTTCATAGGACTCCAGGATGTCCTCTGACTGGA +
Preference number: 5 (lower is better)
Translates to: SRLPGLPGSPGSAEQ*AAGFHRTPGCPLTG
Trigger: TCCAGTCAGAGGACATCCTGGAGTCCTATGAAAACCCGCCGCCCATTGTTCTGCCGAGCCAGGGCTTCCAGGTAGACCTGGAAGCCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp AGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAGAGGGGCTTCTCATaGTCGCCAAATACTCGGAAG +
Preference number: 5 (lower is better)
Translates to: RGRVSAVVAVGGTWRGYRKRGFS*SPNTRK
Trigger: CTTCCGAGTATTTGGCGACAATGAGAAGCCCCTCTT...CCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATTTTCCGCTAGTTCTTaGGTCTTCTCCCAGACAGTG +
Preference number: 5 (lower is better)
Translates to: GVRGRVSAVVAVGGTWRGFSASS*VFSQTV
Trigger: CACTGTCTGGGAGAAGACCAAAGAACTAGCGGAAAA...TCCTCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp TGGGGTGTGAGGGGCAGGGTGAGTGCCGTGGTGGCTGTTGGTGGCACCTGGAGATTTTCCGCTAGTTCTTaGGTCTTCTCCCAGACAGTG +
Preference number: 5 (lower is better)
Translates to: WGVRGRVSAVVAVGGTWRFSASS*VFSQTV
Trigger: CACTGTCTGGGAGAAGACCAAAGAACTAGCGGAAAA...TCTCCAGGTGCCACCAACAGCCACCACGGCACTCACCCTGCCCCTCACACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGTTGTCTAGGACCTGGTaGAGGAGCAGTGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWLSRTW*RSSVPE
Trigger: CTCTGGCACACTGCTCCTCAACCAGGTCCTAGACAA...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp AGAGCTGCGTGGAGAGCTCTGAGGGGTCGTCACTGGCACCTAGGCTaGAGAAGGTGGAATCCAGGTCACGATACTTGTAGCTCAGTGTCC +
Preference number: 5 (lower is better)
Translates to: RAAWRALRGRHWHLG*RRWNPGHDTCSSVS
Trigger: GGACACTGAGCTACAAGTATCGTGACCTGGATTCCACCTTCTGCAGCCTAGGTGCCAGTGACGACCCCTCAGAGCTCTCCACGCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS GCA 90 bp TCCCAGACAGTGTCTCGGACCCTTTTGGAGATCTTGAGCAGGAGATaGCTGAAGGTACCCGGCTGGAAGTGCATGGCGGAGTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: SQTVSRTLLEILSRR*LKVPGWKCMAECWM
Trigger: CATCCAGCACTCCGCCATGCACTTCCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGTCCGAGACACTGTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp AAGTACAGGAGCTCGATGGAGTTTGACATCCAAAACAGGATGTGCTaGAGGTCGGGAACCAGGTCGGCCATGGGGAAGCTGGCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: KYRSSMEFDIQNRMC*RSGTRSAMGKLAQE
Trigger: CTCCTGGGCCAGCTTCCCCATGGCCGACCTGGTTCCCGACCTGCAGCACATCCTGTTTTGGATGTCAAACTCCATCGAGCTCCTGTACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp TGGAGAGCTCTGAGGGGTCGTCACTGGCACCTAGGCTGCAGAAGGTaGAATCCAGGTCACGATACTTGTAGCTCAGTGTCCGGGACAGCA +
Preference number: 5 (lower is better)
Translates to: WRALRGRHWHLGCRR*NPGHDTCSSVSGTA
Trigger: TGCTGTCCCGGACACTGAGCTACAAGTATCGTGACCTGGATTCCACCTTCTGCAGCCTAGGTGCCAGTGACGACCCCTCAGAGCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS CCA 90 bp CACGGATACGCTGTAGCCTCCGGGCTTGGGCGTTTATCCCTGCGGTaGTGGTATCCACATCCCTCGATGCAAGCTCTTCCACATCTGACT +
Preference number: 5 (lower is better)
Translates to: HGYAVASGLGRLSLR*WYPHPSMQALPHLT
Trigger: AGTCAGATGTGGAAGAGCTTGCATCGAGGGATGTGGATACCACCACCGCAGGGATAAACGCCCAAGCCCGGAGGCTACAGCGTATCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS CCA 90 bp ACCCTTTTGGAGATCTTGAGCAGGAGATGCCTGAAGGTACCCGGCTaGAAGTGCATGGCGGAGTGCTGGATGCAGAGGCAGAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: TLLEILSRRCLKVPG*KCMAECWMQRQRRK
Trigger: CTTCCTCCTCTGCCTCTGCATCCAGCACTCCGCCATGCACTTCCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp AGCTTGTGGTCGTCACCCCCAGGCTCAATCAGTGTCATGATCCTCTaGAGCAGTGTGTCCTCCACATCGGGCTCAAACTCCAGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: SLWSSPPGSISVMIL*SSVSSTSGSNSRSS
Trigger: ACTGCTCCTGGAGTTTGAGCCCGATGTGGAGGACACACTGCTGCAGAGGATCATGACACTGATTGAGCCTGGGGGTGACGACCACAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp ATGAAGTACAGGAGCTCGATGGAGTTTGACATCCAAAACAGGATGTaGTGCAGGTCGGGAACCAGGTCGGCCATGGGGAAGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: MKYRSSMEFDIQNRM*CRSGTRSAMGKLAQ
Trigger: CTGGGCCAGCTTCCCCATGGCCGACCTGGTTCCCGACCTGCAGCACATCCTGTTTTGGATGTCAAACTCCATCGAGCTCCTGTACTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp GGATACGCTGTAGCCTCCGGGCTTGGGCGTTTATCCCTGCGGTGGTaGTATCCACATCCCTCGATGCAAGCTCTTCCACATCTGACTTCT +
Preference number: 5 (lower is better)
Translates to: GYAVASGLGRLSLRW*YPHPSMQALPHLTS
Trigger: AGAAGTCAGATGTGGAAGAGCTTGCATCGAGGGATGTGGATACCACCACCGCAGGGATAAACGCCCAAGCCCGGAGGCTACAGCGTATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGCGCTTCAGCTTATTCTaGGTGGGAGGAGACATGATC +
Preference number: 5 (lower is better)
Translates to: CRGGCWWHLERIQETGGGRFSLF*VGGDMI
Trigger: GATCATGTCTCCTCCCACCAAGAATAAGCTGAAGCG...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGACCCTTTTGGAGATCTaGAGCAGGAGATGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: CRGGCWWHLERIQETGGGTLLEI*SRRCLK
Trigger: CTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGT...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTACTGTCAGGGCTGGCTaGGCCCCGCAGCCCCCACAG +
Preference number: 5 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGTVRAG*APQPPQ
Trigger: CTGTGGGGGCTGCGGGGCCAAGCCAGCCCTGACAGT...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGCTGCCTGGGTCCCTATaGGCCAGGGGGCAGCCATGG +
Preference number: 5 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVLPGSL*ARGQPW
Trigger: CCATGGCTGCCCCCTGGCCAATAGGGACCCAGGCAG...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGGTCGGTGGGGAGCTTaGAGCAGCTTCAGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLGRWGA*SSFRGE
Trigger: CTCACCTCTGAAGCTGCTCAAAGCTCCCCACCGACC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp GTGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGTTTTCCGCTAGTTCTTaGGTCTTCTCCCAGACAGTG +
Preference number: 5 (lower is better)
Translates to: VPWWLLVAPGEDTGNRWWFSASS*VFSQTV
Trigger: CACTGTCTGGGAGAAGACCAAAGAACTAGCGGAAAA...CCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp TGCCGTGGTGGCTGTTGGTGGCACCTGGAGAGGATACAGGAAACAGGTGGTGGGGGAGCTCGATGGAGTTaGACATCCAAAACAGGATGT +
Preference number: 5 (lower is better)
Translates to: CRGGCWWHLERIQETGGGGARWS*TSKTGC
Trigger: ACATCCTGTTTTGGATGTCAAACTCCATCGAGCTCC...CCCACCACCTGTTTCCTGTATCCTCTCCAGGTGCCACCAACAGCCACCACGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCCTCAGAGAGGGCCCCTaGTCTAGGACCTGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLLREGP*SRTWLR
Trigger: CCTCAACCAGGTCCTAGACAAGGGGCCCTCTCTGAG...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS TCA 90 bp TCTTCTTGCCTCCATGTCGGATCAAATCCACTGCCCTCATGTAGCTaGCACCCCTCAGGCTGCTGCCATTCACCTCCAGGATTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SSCLHVGSNPLPSCS*HPSGCCHSPPGFGL
Trigger: GAGACCAAATCCTGGAGGTGAATGGCAGCAGCCTGAGGGGTGTCAGCTACATGAGGGCAGTGGATTTGATCCGACATGGAGGCAAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 90 bp ACGTCCAGCTCCTCCTCCATGCTCTGCACGTACAGCGGGGACTTCTaGTGGATGAAGTACAGGAGCTCGATGGAGTTTGACATCCAAAAC +
Preference number: 5 (lower is better)
Translates to: TSSSSSMLCTYSGDF*WMKYRSSMEFDIQN
Trigger: GTTTTGGATGTCAAACTCCATCGAGCTCCTGTACTTCATCCAGCAGAAGTCCCCGCTGTACGTGCAGAGCATGGAGGAGGAGCTGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp TCCAGCTCCTCCTCCATGCTCTGCACGTACAGCGGGGACTTCTGCTaGATGAAGTACAGGAGCTCGATGGAGTTTGACATCCAAAACAGG +
Preference number: 5 (lower is better)
Translates to: SSSSSMLCTYSGDFC*MKYRSSMEFDIQNR
Trigger: CCTGTTTTGGATGTCAAACTCCATCGAGCTCCTGTACTTCATCCAGCAGAAGTCCCCGCTGTACGTGCAGAGCATGGAGGAGGAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCGTGTCCGGGACAGCATaGTGGATAGGAGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLVSGTA*WIGAGS
Trigger: AGAGCCAGCTCCTATCCACAATGCTGTCCCGGACAC...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCAAGCTGATGCTGGGTTaGCTAGACGGTGTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLKLMLG*LDGVRW
Trigger: CCAGCGCACACCGTCTAGCAAACCCAGCATCAGCTT...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS TCA 90 bp GCTCCTCCTCCATGCTCTGCACGTACAGCGGGGACTTCTGCTGGATaGAGTACAGGAGCTCGATGGAGTTTGACATCCAAAACAGGATGT +
Preference number: 5 (lower is better)
Translates to: APPPCSARTAGTSAG*STGARWSLTSKTGC
Trigger: ACATCCTGTTTTGGATGTCAAACTCCATCGAGCTCCTGTACTTCATCCAGCAGAAGTCCCCGCTGTACGTGCAGAGCATGGAGGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 90 bp AGCTCAAACCTCCGGGACAAGCCTTCTCGGGGTTTCCATAACTCCTaGATCAAGAGGGGCTTCTCATTGTCGCCAAATACTCGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: SSNLRDKPSRGFHNS*IKRGFSLSPNTRKH
Trigger: GTGCTTCCGAGTATTTGGCGACAATGAGAAGCCCCTCTTGATCCAGGAGTTATGGAAACCCCGAGAAGGCTTGTCCCGGAGGTTTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACAAGCTGATGCTGGGTTaGCTAGACGGTGTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDKLMLG*LDGVRW
Trigger: CCAGCGCACACCGTCTAGCAAACCCAGCATCAGCTT...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGGAAGGTGGACAGACGTaGAGGCCCAGAGGAGGGGAT +
Preference number: 5 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVEGGQT*RPRGGD
Trigger: ATCCCCTCCTCTGGGCCTCAACGTCTGTCCACCTTC...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110785.2
CDS CCA 90 bp AATCCAGGTCACGATACTTGTAGCTCAGTGTCCGGGACAGCATTGTaGATAGGAGCTGGCTCTGTCGCTTCAGCTTATTCTTGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: NPGHDTCSSVSGTAL*IGAGSVASAYSWWE
Trigger: CTCCCACCAAGAATAAGCTGAAGCGACAGAGCCAGCTCCTATCCACAATGCTGTCCCGGACACTGAGCTACAAGTATCGTGACCTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS-3UTR CAA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGGTCGGTGGGGAGCTTaGAGCAGCTTCAGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGGRWGA*SSFRGE
Trigger: CTCACCTCTGAAGCTGCTCAAAGCTCCCCACCGACC...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCCGCTTCAGCTTATTCTaGGTGGGAGGAGACATGATC +
Preference number: 5 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLRFSLF*VGGDMI
Trigger: GATCATGTCTCCTCCCACCAAGAATAAGCTGAAGCG...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACAAGAGGGGCTTCTCATaGTCGCCAAATACTCGGAAG +
Preference number: 5 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDKRGFS*SPNTRK
Trigger: CTTCCGAGTATTTGGCGACAATGAGAAGCCCCTCTT...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ACTAAGATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACACCCTTTTGGAGATCTaGAGCAGGAGATGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: TKMHTVKGVLNVRPQHRDTLLEI*SRRCLK
Trigger: CTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGT...GTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCATCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ATGCACACTGTCAAAGGTGTCCTCAACGTGAGGCCACAACATAGGGACTCACTCTTTTCCGCTAGTTCTTaGGTCTTCTCCCAGACAGTG +
Preference number: 5 (lower is better)
Translates to: MHTVKGVLNVRPQHRDSLFSASS*VFSQTV
Trigger: CACTGTCTGGGAGAAGACCAAAGAACTAGCGGAAAA...GAGTGAGTCCCTATGTTGTGGCCTCACGTTGAGGACACCTTTGACAGTGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGAAGAGGGGCTTCTCATaGTCGCCAAATACTCGGAAG +
Preference number: 5 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVKRGFS*SPNTRK
Trigger: CTTCCGAGTATTTGGCGACAATGAGAAGCCCCTCTT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp ATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGTGACCCTTTTGGAGATCTaGAGCAGGAGATGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: IGTHSVNFKNQDWLDWGVTLLEI*SRRCLK
Trigger: CTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGT...CACACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS-3UTR CAA 90 bp AACATAGGGACTCACTCAGTCAACTTTAAAAACCAGGATTGGCTGGACTGGGGTGGAGCTCGATGGAGTTaGACATCCAAAACAGGATGT +
Preference number: 5 (lower is better)
Translates to: NIGTHSVNFKNQDWLDWGGARWS*TSKTGC
Trigger: ACATCCTGTTTTGGATGTCAAACTCCATCGAGCTCC...ACCCCAGTCCAGCCAATCCTGGTTTTTAAAGTTGACTGAGTGAGTCCCTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS TCA 72 bp GCTGCTGCCATTCACCTCCAGGATTTGGTCTCCGAGTaGCAGCCGCCCATCAGATGCCGCGGGGCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: AAAIHLQDLVSE*QPPIRCRGAPG
Trigger: CCCGGGAGCCCCGCGGCATCTGATGGGCGGCTGTCACTCGGAGACCAAATCCTGGAGGTGAATGGCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS TCA 72 bp GTTGAGGCCCAGAGGAGGGGATGGCCCAGGTATCCATaGTGGCTCCCTCGATGCTCTCGGGCTGGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: VEAQRRGWPRYP*WLPRCSRAGQA
Trigger: GGCCTGCCCAGCCCGAGAGCATCGAGGGAGCCATCATGGATACCTGGGCCATCCCCTCCTCTGGGCCTCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110785.2
CDS TCA 72 bp CACCACTCGCCGAAGCTCCTCGGGCAGAGCTGGACCTaGGCGCCAGCTCTCCCTGCGCTCTGTCTGAAATGG +
Preference number: 6 (lower is better)
Translates to: HHSPKLLGQSWT*APALPALCLKW
Trigger: CCATTTCAGACAGAGCGCAGGGAGAGCTGGCGCTCAGGTCCAGCTCTGCCCGAGGAGCTTCGGCGAGTGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS TCA 72 bp CAGCTGCTGCAGGAGGTCCAAGGTGGCCTGGAACACTaGCACCACTCGCCGAAGCTCCTCGGGCAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: QLLQEVQGGLEH*HHSPKLLGQSW
Trigger: CCAGCTCTGCCCGAGGAGCTTCGGCGAGTGGTGTCAGTGTTCCAGGCCACCTTGGACCTCCTGCAGCAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp AGCATGCAGGAGGAGTCAGTGTGCAGAGAGCCAGCCTaGGAGCCCCTGCGGTCCCCTCGGGTAGGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: SMQEESVCREPA*EPLRSPRVGCL
Trigger: AAGACAGCCTACCCGAGGGGACCGCAGGGGCTCCCAGGCTGGCTCTCTGCACACTGACTCCTCCTGCATGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CAA 90 bp GCTGGTCTCGCTGACTGTACGGCGCAGCCTGGTCGGTGGGGAGCTTaGAGCAGCTTCAGAGGTGAGGGCTGGGGTTCCCTTGGCACGGAT +
Preference number: 6 (lower is better)
Translates to: AGLADCTAQPGRWGA*SSFRGEGWGSLGTD
Trigger: ATCCGTGCCAAGGGAACCCCAGCCCTCACCTCTGAAGCTGCTCAAAGCTCCCCACCGACCAGGCTGCGCCGTACAGTCAGCGAGACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000139278.2
CDS TCA 72 bp CTGACTGTACGGCGCAGCCTGGTCGGTGGGGAGCTTTaGGCAGCTTCAGAGGTGAGGGCTGGGGTTCCCTTG +
Preference number: 6 (lower is better)
Translates to: LTVRRSLVGGEL*AASEVRAGVPL
Trigger: CAAGGGAACCCCAGCCCTCACCTCTGAAGCTGCTCAAAGCTCCCCACCGACCAGGCTGCGCCGTACAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000139278.2
CDS TCA 72 bp CAGGTAGCGATGGTGCTGGGCTTAGGCTGGTCTCGCTaGCTGTACGGCGCAGCCTGGTCGGTGGGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: QVAMVLGLGWSR*LYGAAWSVGSF
Trigger: AAAGCTCCCCACCGACCAGGCTGCGCCGTACAGTCAGCGAGACCAGCCTAAGCCCAGCACCATCGCTACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000139278.2
CDS TCA 72 bp ACGGTGTGCGCTGGCCCACTGTGTGCCGTTCCTTGCTaGGCACGTACACCAGGCTGTCGTGCTGCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: TVCAGPLCAVPC*ARTPGCRAAGC
Trigger: ACAGCCAGCAGCACGACAGCCTGGTGTACGTGCTCAGCAAGGAACGGCACACAGTGGGCCAGCGCACACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp GCCCACTCCAGGAACTGCTGCAGGCGGGCACACACCTaGACACCCCTGGGCCAATGGAAGCAACTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: AHSRNCCRRAHT*TPLGQWKQLRE
Trigger: CTCTCTGAGTTGCTTCCATTGGCCCAGGGGTGTGCAGGTGTGTGCCCGCCTGCAGCAGTTCCTGGAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp AGGACTGCACCAGGCAGACCACCTGGCCCATTCCTCTaGCCGTCAAGGACTGCTCTTCCACAGAGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: RTAPGRPPGPFL*PSRTALPQRPL
Trigger: CAGCGGCCTCTGTGGAAGAGCAGTCCTTGACGGGCAGAGGAATGGGCCAGGTGGTCTGCCTGGTGCAGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp ACAGGATGTGCTGCAGGTCGGGAACCAGGTCGGCCATaGGGAAGCTGGCCCAGGAGATGGGCTCCTGGAGTT +
Preference number: 6 (lower is better)
Translates to: TGCAAGREPGRP*GSWPRRWAPGV
Trigger: AACTCCAGGAGCCCATCTCCTGGGCCAGCTTCCCCATGGCCGACCTGGTTCCCGACCTGCAGCACATCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp GGAACTGCTGCAGGCGGGCACACACCTGCACACCCCTaGGCCAATGGAAGCAACTCAGAGAGGGCCCCTTGT +
Preference number: 6 (lower is better)
Translates to: GTAAGGHTPAHP*ANGSNSERAPC
Trigger: ACAAGGGGCCCTCTCTGAGTTGCTTCCATTGGCCCAGGGGTGTGCAGGTGTGTGCCCGCCTGCAGCAGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp CAGCCATGGCCTTCCAGATGGCCCTCAGGAATTGTGTaGTACAGGCCCTCGATGCTCTCGGGCTGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: QPWPSRWPSGIV*YRPSMLSGWAG
Trigger: GCCTGCCCAGCCCGAGAGCATCGAGGGCCTGTACCACACAATTCCTGAGGGCCATCTGGAAGGCCATGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
CDS CAA 72 bp CTAGACGGTGTGCGCTGGCCCACTGTGTGCCGTTCCTaGCTGAGCACGTACACCAGGCTGTCGTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LDGVRWPTVCRS*LSTYTRLSCCW
Trigger: CCAGCAGCACGACAGCCTGGTGTACGTGCTCAGCAAGGAACGGCACACAGTGGGCCAGCGCACACCGTCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp CTGGGTTTGCTAGACGGTGTGCGCTGGCCCACTGTGTaGCGTTCCTTGCTGAGCACGTACACCAGGCTGTCG +
Preference number: 6 (lower is better)
Translates to: LGLLDGVRWPTV*RSLLSTYTRLS
Trigger: CGACAGCCTGGTGTACGTGCTCAGCAAGGAACGGCACACAGTGGGCCAGCGCACACCGTCTAGCAAACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp CCGAGAGCTGCGTGGAGAGCTCTGAGGGGTCGTCACTaGCACCTAGGCTGCAGAAGGTGGAATCCAGGTCAC +
Preference number: 6 (lower is better)
Translates to: PRAAWRALRGRH*HLGCRRWNPGH
Trigger: GTGACCTGGATTCCACCTTCTGCAGCCTAGGTGCCAGTGACGACCCCTCAGAGCTCTCCACGCAGCTCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS CCA 72 bp AGGGGCTTCTCATTGTCGCCAAATACTCGGAAGCACTaGGCCTGCCACCGCTGCCCAGAGTCCCCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: RGFSLSPNTRKH*ACHRCPESPAW
Trigger: CCAAGCTGGGGACTCTGGGCAGCGGTGGCAGGCCCAGTGCTTCCGAGTATTTGGCGACAATGAGAAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS CCA 72 bp CTGAAGGTACCCGGCTGGAAGTGCATGGCGGAGTGCTaGATGCAGAGGCAGAGGAGGAAGGCAGGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: LKVPGWKCMAEC*MQRQRRKAGVS
Trigger: GCTGACACCTGCCTTCCTCCTCTGCCTCTGCATCCAGCACTCCGCCATGCACTTCCAGCCGGGTACCTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CAA 72 bp GGCAGGATGTCTGGGGCAGACAAGCTGATGCTGGGTTaGCTAGACGGTGTGCGCTGGCCCACTGTGTGCCGT +
Preference number: 6 (lower is better)
Translates to: GRMSGADKLMLG*LDGVRWPTVCR
Trigger: ACGGCACACAGTGGGCCAGCGCACACCGTCTAGCAAACCCAGCATCAGCTTGTCTGCCCCAGACATCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp TTGAGCAGGAGATGCCTGAAGGTACCCGGCTGGAAGTaGATGGCGGAGTGCTGGATGCAGAGGCAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: LSRRCLKVPGWK*MAECWMQRQRR
Trigger: CCTCCTCTGCCTCTGCATCCAGCACTCCGCCATGCACTTCCAGCCGGGTACCTTCAGGCATCTCCTGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp ATCTGGGAGGCCACCTCAGGATGCATCTGCAGCTGCTaGAGGAGGTCCAAGGTGGCCTGGAACACTGACACC +
Preference number: 6 (lower is better)
Translates to: IWEATSGCICSC*RRSKVAWNTDT
Trigger: GGTGTCAGTGTTCCAGGCCACCTTGGACCTCCTGCAGCAGCTGCAGATGCATCCTGAGGTGGCCTCCCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp AGCATCTGGGAGGCCACCTCAGGATGCATCTGCAGCTaGTGCAGGAGGTCCAAGGTGGCCTGGAACACTGAC +
Preference number: 6 (lower is better)
Translates to: SIWEATSGCICS*CRRSKVAWNTD
Trigger: GTCAGTGTTCCAGGCCACCTTGGACCTCCTGCAGCAGCTGCAGATGCATCCTGAGGTGGCCTCCCAGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp GTTCCCTTGGCACGGATACGCTGTAGCCTCCGGGCTTaGGCGTTTATCCCTGCGGTGGTGGTATCCACATCC +
Preference number: 6 (lower is better)
Translates to: VPLARIRCSLRA*AFIPAVVVSTS
Trigger: GGATGTGGATACCACCACCGCAGGGATAAACGCCCAAGCCCGGAGGCTACAGCGTATCCGTGCCAAGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS CCA 72 bp GAACCAGGTCGGCCATGGGGAAGCTGGCCCAGGAGATaGGCTCCTGGAGTTGTGCCTGCTTTTCCGCTAGTT +
Preference number: 6 (lower is better)
Translates to: EPGRPWGSWPRR*APGVVPAFPLV
Trigger: AACTAGCGGAAAAGCAGGCACAACTCCAGGAGCCCATCTCCTGGGCCAGCTTCCCCATGGCCGACCTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp CAGGAATTGTGTGGTACAGGCCCTGGGAAGAGAAGGTaGACAGACGTTGAGGCCCAGAGGAGGGGATGGCCC +
Preference number: 6 (lower is better)
Translates to: QELCGTGPGKRR*TDVEAQRRGWP
Trigger: GGGCCATCCCCTCCTCTGGGCCTCAACGTCTGTCCACCTTCTCTTCCCAGGGCCTGTACCACACAATTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110785.2
CDS CCA 72 bp AGCGCTCCAGTGCCTCTTTCACCAGCTCCTGGGCACTaGAGGAGCCAGTGGCCAAGACACTCTTATAGTGGG +
Preference number: 6 (lower is better)
Translates to: SAPVPLSPAPGH*RSQWPRHSYSG
Trigger: CCCACTATAAGAGTGTCTTGGCCACTGGCTCCTCCAGTGCCCAGGAGCTGGTGAAAGAGGCACTGGAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS CCA 72 bp GCTGTAGCCTCCGGGCTTGGGCGTTTATCCCTGCGGTaGTGGTATCCACATCCCTCGATGCAAGCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: AVASGLGRLSLR*WYPHPSMQALP
Trigger: TGGAAGAGCTTGCATCGAGGGATGTGGATACCACCACCGCAGGGATAAACGCCCAAGCCCGGAGGCTACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS CCA 72 bp GACAAGCTGATGCTGGGTTTGCTAGACGGTGTGCGCTaGCCCACTGTGTGCCGTTCCTTGCTGAGCACGTAC +
Preference number: 6 (lower is better)
Translates to: DKLMLGLLDGVR*PTVCRSLLSTY
Trigger: GTACGTGCTCAGCAAGGAACGGCACACAGTGGGCCAGCGCACACCGTCTAGCAAACCCAGCATCAGCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp GAGATCTTGAGCAGGAGATGCCTGAAGGTACCCGGCTaGAAGTGCATGGCGGAGTGCTGGATGCAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: EILSRRCLKVPG*KCMAECWMQRQ
Trigger: CTGCCTCTGCATCCAGCACTCCGCCATGCACTTCCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp CCAGGTCTACCTGGAAGCCCTGGCTCGGCAGAACAATaGGCGGCGGGTTTTCATAGGACTCCAGGATGTCCT +
Preference number: 6 (lower is better)
Translates to: PGLPGSPGSAEQ*AAGFHRTPGCP
Trigger: AGGACATCCTGGAGTCCTATGAAAACCCGCCGCCCATTGTTCTGCCGAGCCAGGGCTTCCAGGTAGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CAA 90 bp CCTTCTCGGGGTTTCCATAACTCCTGGATCAAGAGGGGCTTCTCATaGTCGCCAAATACTCGGAAGCACTGGGCCTGCCACCGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: PSRGFHNSWIKRGFS*SPNTRKHWACHRCP
Trigger: TGGGCAGCGGTGGCAGGCCCAGTGCTTCCGAGTATTTGGCGACAATGAGAAGCCCCTCTTGATCCAGGAGTTATGGAAACCCCGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS CAA 90 bp ACCTGCACACCCCTGGGCCAATGGAAGCAACTCAGAGAGGGCCCCTaGTCTAGGACCTGGTTGAGGAGCAGTGTGCCAGAGAAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: TCTPLGQWKQLREGP*SRTWLRSSVPEKKK
Trigger: CTTCTTCTTCTCTGGCACACTGCTCCTCAACCAGGTCCTAGACAAGGGGCCCTCTCTGAGTTGCTTCCATTGGCCCAGGGGTGTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp GTGTCTCGGACCCTTTTGGAGATCTTGAGCAGGAGATaGCTGAAGGTACCCGGCTGGAAGTGCATGGCGGAG +
Preference number: 6 (lower is better)
Translates to: VSRTLLEILSRR*LKVPGWKCMAE
Trigger: CTCCGCCATGCACTTCCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGTCCGAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp ACAGGAAGTGGCGGATGTAGAGCAGGTGCTGGTAGATaGTGTCCTCCACGCAGTCGGCTTCCAGGTCTACCT +
Preference number: 6 (lower is better)
Translates to: TGSGGCRAGAGR*CPPRSRLPGLP
Trigger: AGGTAGACCTGGAAGCCGACTGCGTGGAGGACAGCATCTACCAGCACCTGCTCTACATCCGCCACTTCCTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp GTAGCCTCCGGGCTTGGGCGTTTATCCCTGCGGTGGTaGTATCCACATCCCTCGATGCAAGCTCTTCCACAT +
Preference number: 6 (lower is better)
Translates to: VASGLGRLSLRW*YPHPSMQALPH
Trigger: ATGTGGAAGAGCTTGCATCGAGGGATGTGGATACCACCACCGCAGGGATAAACGCCCAAGCCCGGAGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS CAA 90 bp TCGCCATGTTGTAGCACCACAGGGTTCCTTCCCACTTCTGAGAAGTaGACTGACACCGAAGCCCCTGTGATGGGCTCCAGCACTAGCCTG +
Preference number: 6 (lower is better)
Translates to: SPCCSTTGFLPTSEK*TDTEAPVMGSSTSL
Trigger: CAGGCTAGTGCTGGAGCCCATCACAGGGGCTTCGGTGTCAGTCAACTTCTCAGAAGTGGGAAGGAACCCTGTGGTGCTACAACATGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp TGGAGAGCTCTGAGGGGTCGTCACTGGCACCTAGGCTaGAGAAGGTGGAATCCAGGTCACGATACTTGTAGC +
Preference number: 6 (lower is better)
Translates to: WRALRGRHWHLG*RRWNPGHDTCS
Trigger: GCTACAAGTATCGTGACCTGGATTCCACCTTCTGCAGCCTAGGTGCCAGTGACGACCCCTCAGAGCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS GCA 72 bp TCGTCACCCCCAGGCTCAATCAGTGTCATGATCCTCTaGAGCAGTGTGTCCTCCACATCGGGCTCAAACTCC +
Preference number: 6 (lower is better)
Translates to: SSPPGSISVMIL*SSVSSTSGSNS
Trigger: GGAGTTTGAGCCCGATGTGGAGGACACACTGCTGCAGAGGATCATGACACTGATTGAGCCTGGGGGTGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp AGGAGCTCGATGGAGTTTGACATCCAAAACAGGATGTaGTGCAGGTCGGGAACCAGGTCGGCCATGGGGAAG +
Preference number: 6 (lower is better)
Translates to: RSSMEFDIQNRM*CRSGTRSAMGK
Trigger: CTTCCCCATGGCCGACCTGGTTCCCGACCTGCAGCACATCCTGTTTTGGATGTCAAACTCCATCGAGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp TCGCATCTTCTTGCCTCCATGTCGGATCAAATCCACTaGCCTCATGTAGCTGACACCCCTCAGGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SHLLASMSDQIH*PHVADTPQAAA
Trigger: GGCAGCAGCCTGAGGGGTGTCAGCTACATGAGGGCAGTGGATTTGATCCGACATGGAGGCAAGAAGATGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp CTGAGGGGTCGTCACTGGCACCTAGGCTGCAGAAGGTaGAATCCAGGTCACGATACTTGTAGCTCAGTGTCC +
Preference number: 6 (lower is better)
Translates to: LRGRHWHLGCRR*NPGHDTCSSVS
Trigger: GGACACTGAGCTACAAGTATCGTGACCTGGATTCCACCTTCTGCAGCCTAGGTGCCAGTGACGACCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS CAA 72 bp TGTAGCACCACAGGGTTCCTTCCCACTTCTGAGAAGTaGACTGACACCGAAGCCCCTGTGATGGGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: CSTTGFLPTSEK*TDTEAPVMGSS
Trigger: GCTGGAGCCCATCACAGGGGCTTCGGTGTCAGTCAACTTCTCAGAAGTGGGAAGGAACCCTGTGGTGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CAA 90 bp TCTTTGGTCTTCTCCCAGACAGTGTCTCGGACCCTTTTGGAGATCTaGAGCAGGAGATGCCTGAAGGTACCCGGCTGGAAGTGCATGGCG +
Preference number: 6 (lower is better)
Translates to: SLVFSQTVSRTLLEI*SRRCLKVPGWKCMA
Trigger: CGCCATGCACTTCCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGTCCGAGACACTGTCTGGGAGAAGACCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS GCA 72 bp TCCTCCTCCATGCTCTGCACGTACAGCGGGGACTTCTaGTGGATGAAGTACAGGAGCTCGATGGAGTTTGAC +
Preference number: 6 (lower is better)
Translates to: SSSMLCTYSGDF*WMKYRSSMEFD
Trigger: GTCAAACTCCATCGAGCTCCTGTACTTCATCCAGCAGAAGTCCCCGCTGTACGTGCAGAGCATGGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CAA 72 bp TTCTCCCAGACAGTGTCTCGGACCCTTTTGGAGATCTaGAGCAGGAGATGCCTGAAGGTACCCGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: FSQTVSRTLLEI*SRRCLKVPGWK
Trigger: CTTCCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGTCCGAGACACTGTCTGGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CAA 90 bp TCCGCTAGTTCTTTGGTCTTCTCCCAGACAGTGTCTCGGACCCTTTaGGAGATCTTGAGCAGGAGATGCCTGAAGGTACCCGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SASSLVFSQTVSRTL*EILSRRCLKVPGWK
Trigger: CTTCCAGCCGGGTACCTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGTCCGAGACACTGTCTGGGAGAAGACCAAAGAACTAGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp TCCTCCATGCTCTGCACGTACAGCGGGGACTTCTGCTaGATGAAGTACAGGAGCTCGATGGAGTTTGACATC +
Preference number: 6 (lower is better)
Translates to: SSMLCTYSGDFC*MKYRSSMEFDI
Trigger: GATGTCAAACTCCATCGAGCTCCTGTACTTCATCCAGCAGAAGTCCCCGCTGTACGTGCAGAGCATGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp TGGAAGCAACTCAGAGAGGGCCCCTTGTCTAGGACCTaGTTGAGGAGCAGTGTGCCAGAGAAGAAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: WKQLREGPLSRT*LRSSVPEKKKR
Trigger: TCTCTTCTTCTTCTCTGGCACACTGCTCCTCAACCAGGTCCTAGACAAGGGGCCCTCTCTGAGTTGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CAA 72 bp GGTTTCCATAACTCCTGGATCAAGAGGGGCTTCTCATaGTCGCCAAATACTCGGAAGCACTGGGCCTGCCAC +
Preference number: 6 (lower is better)
Translates to: GFHNSWIKRGFS*SPNTRKHWACH
Trigger: GTGGCAGGCCCAGTGCTTCCGAGTATTTGGCGACAATGAGAAGCCCCTCTTGATCCAGGAGTTATGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS CAA 72 bp GGCTCCTGGAGTTGTGCCTGCTTTTCCGCTAGTTCTTaGGTCTTCTCCCAGACAGTGTCTCGGACCCTTTTG +
Preference number: 6 (lower is better)
Translates to: GSWSCACFSASS*VFSQTVSRTLL
Trigger: CAAAAGGGTCCGAGACACTGTCTGGGAGAAGACCAAAGAACTAGCGGAAAAGCAGGCACAACTCCAGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CAA 90 bp CAGGAGATGGGCTCCTGGAGTTGTGCCTGCTTTTCCGCTAGTTCTTaGGTCTTCTCCCAGACAGTGTCTCGGACCCTTTTGGAGATCTTG +
Preference number: 6 (lower is better)
Translates to: QEMGSWSCACFSASS*VFSQTVSRTLLEIL
Trigger: CAAGATCTCCAAAAGGGTCCGAGACACTGTCTGGGAGAAGACCAAAGAACTAGCGGAAAAGCAGGCACAACTCCAGGAGCCCATCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS TCA 72 bp CCATGCTCTGCACGTACAGCGGGGACTTCTGCTGGATaGAGTACAGGAGCTCGATGGAGTTTGACATCCAAA +
Preference number: 6 (lower is better)
Translates to: PCSARTAGTSAG*STGARWSLTSK
Trigger: TTTGGATGTCAAACTCCATCGAGCTCCTGTACTTCATCCAGCAGAAGTCCCCGCTGTACGTGCAGAGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp CTCCGGGACAAGCCTTCTCGGGGTTTCCATAACTCCTaGATCAAGAGGGGCTTCTCATTGTCGCCAAATACT +
Preference number: 6 (lower is better)
Translates to: LRDKPSRGFHNS*IKRGFSLSPNT
Trigger: AGTATTTGGCGACAATGAGAAGCCCCTCTTGATCCAGGAGTTATGGAAACCCCGAGAAGGCTTGTCCCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
CDS CAA 72 bp GGTCACGATACTTGTAGCTCAGTGTCCGGGACAGCATaGTGGATAGGAGCTGGCTCTGTCGCTTCAGCTTAT +
Preference number: 6 (lower is better)
Translates to: GHDTCSSVSGTA*WIGAGSVASAY
Trigger: ATAAGCTGAAGCGACAGAGCCAGCTCCTATCCACAATGCTGTCCCGGACACTGAGCTACAAGTATCGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS CAA 72 bp TCTTTGGTCTTCTCCCAGACAGTGTCTCGGACCCTTTaGGAGATCTTGAGCAGGAGATGCCTGAAGGTACCC +
Preference number: 6 (lower is better)
Translates to: SLVFSQTVSRTL*EILSRRCLKVP
Trigger: GGGTACCTTCAGGCATCTCCTGCTCAAGATCTCCAAAAGGGTCCGAGACACTGTCTGGGAGAAGACCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CAA 90 bp TGGAATCCAGGTCACGATACTTGTAGCTCAGTGTCCGGGACAGCATaGTGGATAGGAGCTGGCTCTGTCGCTTCAGCTTATTCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: WNPGHDTCSSVSGTA*WIGAGSVASAYSWW
Trigger: CCACCAAGAATAAGCTGAAGCGACAGAGCCAGCTCCTATCCACAATGCTGTCCCGGACACTGAGCTACAAGTATCGTGACCTGGATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS CCA 72 bp CACGATACTTGTAGCTCAGTGTCCGGGACAGCATTGTaGATAGGAGCTGGCTCTGTCGCTTCAGCTTATTCT +
Preference number: 6 (lower is better)
Translates to: HDTCSSVSGTAL*IGAGSVASAYS
Trigger: AGAATAAGCTGAAGCGACAGAGCCAGCTCCTATCCACAATGCTGTCCCGGACACTGAGCTACAAGTATCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110785.2
ENSMUST00000129212.2
CDS CCA 72 bp ATTCCAAGAGGGCCGGGAGGCAGACATACAAGCACTTaGAGAGGTAATACACGCACTGCTGGAAAGCATAGA +
Preference number: 6 (lower is better)
Translates to: IPRGPGGRHTST*RGNTRTAGKHR
Trigger: TCTATGCTTTCCAGCAGTGCGTGTATTACCTCTCCAAGTGCTTGTATGTCTGCCTCCCGGCCCTCTTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS TCA 72 bp ATAAAACATGGTGGGTGCGTCTTCATGAATAACCACTaGGGATTTCAACCAGTGGCTGGGGGAAGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: IKHGGCVFMNNH*GFQPVAGGRLE
Trigger: CTCCAGCCTTCCCCCAGCCACTGGTTGAAATCCTCAGTGGTTATTCATGAAGACGCACCCACCATGTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085758.10
CDS GCA 72 bp CCATGTCAGACTTGGCAACTAAAAATCGCATCTTCTTaGCTCCATGTCGGATCAAATCCACTGCCCTCATGT +
Preference number: 6 (lower is better)
Translates to: PCQTWQLKIASS*LHVGSNPLPSC
Trigger: ACATGAGGGCAGTGGATTTGATCCGACATGGAGGCAAGAAGATGCGATTTTTAGTTGCCAAGTCTGACATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CCA 72 bp GGAAGCGGATTTTCTTGGCCGTTTCCATGTCAGACTTaGCAACTAAAAATCGCATCTTCTTGCCTCCATGTC +
Preference number: 6 (lower is better)
Translates to: GSGFSWPFPCQT*QLKIASSCLHV
Trigger: GACATGGAGGCAAGAAGATGCGATTTTTAGTTGCCAAGTCTGACATGGAAACGGCCAAGAAAATCCGCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2
CDS CAA 72 bp CGGAAGCGGATTTTCTTGGCCGTTTCCATGTCAGACTaGGCAACTAAAAATCGCATCTTCTTGCCTCCATGT +
Preference number: 6 (lower is better)
Translates to: RKRIFLAVSMSD*ATKNRIFLPPC
Trigger: ACATGGAGGCAAGAAGATGCGATTTTTAGTTGCCAAGTCTGACATGGAAACGGCCAAGAAAATCCGCTTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000063635.15
ENSMUST00000085758.10
ENSMUST00000110784.8
ENSMUST00000110785.2