Pregenerated sensors for RAD9B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038569Ensembl transcript IDs: ENSMUST00000049009.7, ENSMUST00000117263.8, ENSMUST00000144268.2, ENSMUST00000149600.8
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGCCGCTGCCGCTGCCTTTGTTCTGGATAGAGTAGCCAGCAGATaGAAACAGGGCAGGAGTGGTTTGGAGGCGGCTGGCGGGATTGGC | + |
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Preference number: 1 (lower is better) Translates to: AAAAAAFVLDRVASR*KQGRSGLEAAGGIG Trigger: GCCAATCCCGCCAGCCGCCTCCAAACCACTCCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAGAACAAAGGCAGCGGCAGCGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR CCA 90 bp | ACTGATAGTCTGGGGCATCCTGGGACAGTCTGCTCCATTTCCACTTaGCCTTCAGGCAGCCAAGTGCCCAGCGCGGCTATCACTGAGCGT | + |
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Preference number: 1 (lower is better) Translates to: TDSLGHPGTVCSIST*PSGSQVPSAAITER Trigger: ACGCTCAGTGATAGCCGCGCTGGGCACTTGGCTGCCTGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR CCA 90 bp | CTCTGTCCCCCGAGTAGCACACGGATTTTAGTGACACTGATAGTCTaGGGCATCCTGGGACAGTCTGCTCCATTTCCACTTGGCCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: LCPPSSTRILVTLIV*GILGQSAPFPLGLQ Trigger: CTGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATCAGTGTCACTAAAATCCGTGTGCTACTCGGGGGACAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR CCA 90 bp | TGGCTACTCACTCACAGAGAATTCATTCCAGGTATGTGTCTGGGTTaGGCTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGGCAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: WLLTHREFIPGMCLG*AGSGETGYKLQGRR Trigger: TCTCCTGCCTTGGAGCTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTGGAATGAATTCTCTGTGAGTGAGTAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR CCA 90 bp | GTGCTTGGCTACTCACTCACAGAGAATTCATTCCAGGTATGTGTCTaGGTTGGGCTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: VLGYSLTENSFQVCV*VGLGLERLGISSKA Trigger: TGCCTTGGAGCTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTGGAATGAATTCTCTGTGAGTGAGTAGCCAAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR GCA 90 bp | TCTGTGTGTACTGATGCGCTGCCTTTTCTGTTGAGACTATCATCGTaGGTCCTACCAGAGGCAATGACCCGAATCGATGTTGGAAATATA | + |
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Preference number: 1 (lower is better) Translates to: SVCTDALPFLLRLSS*VLPEAMTRIDVGNI Trigger: TATATTTCCAACATCGATTCGGGTCATTGCCTCTGGTAGGACGCACGATGATAGTCTCAACAGAAAAGGCAGCGCATCAGTACACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR CCA 90 bp | AGAAGTGAGGGGAACAAGTCATGTATCCCGAGTTATCTGTGTGCTTaGCTACTCACTCACAGAGAATTCATTCCAGGTATGTGTCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: RSEGNKSCIPSYLCA*LLTHREFIPGMCLG Trigger: ACCCAGACACATACCTGGAATGAATTCTCTGTGAGTGAGTAGCCAAGCACACAGATAACTCGGGATACATGACTTGTTCCCCTCACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR CCA 90 bp | ACTATCATCGTGCGTCCTACCAGAGGCAATGACCCGAATCGATGTTaGAAATATAACTTATGCAGGAATAGTTCTTGTTCCTCTCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: TIIVRPTRGNDPNRC*KYNLCRNSSCSSPG Trigger: GCCTGGAGAGGAACAAGAACTATTCCTGCATAAGTTATATTTCCAACATCGATTCGGGTCATTGCCTCTGGTAGGACGCACGATGATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTGAAACAGGGCAGGAGTaGTTTGGAGGCGGCTGGCGG | + |
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Preference number: 2 (lower is better) Translates to: TGYKLQGRRVPSTAAAAAETGQE*FGGGWR Trigger: CCGCCAGCCGCCTCCAAACCACTCCTGCCCTGTTTC...AGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTGGAGCTTATACCCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTGCAACGATGAGTAAATaGCGAAGCAAGTCTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: TGYKLQGRRVPSTAAAAAATMSK*RSKSES Trigger: AGACTCAGACTTGCTTCGTCATTTACTCATCGTTGC...AGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTGGAGCTTATACCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCATCACATACACTGGAATGCCTGCTGTCTGCAGTCGGGCACAGAAGCCCCAGGACGTGTCAAGGCTaGAGCAGAGTAAACAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: RPSHTLECLLSAVGHRSPRTCQG*SRVNSG Trigger: GCCACTGTTTACTCTGCTGCAGCCTTGACACGTCCT...GGGGCTTCTGTGCCCGACTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR-3UTR TCA 90 bp | GATGCGCTGCCTTTTCTGTTGAGACTATCATCGTGCGTCCTACCAGAGGCAATGTGTTCCTCTCCAGGCTaGGCTCTGGCTGCTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: DALPFLLRLSSCVLPEAMCSSPG*ALAAVC Trigger: GCACACAGCAGCCAGAGCTCAGCCTGGAGAGGAACA...CATTGCCTCTGGTAGGACGCACGATGATAGTCTCAACAGAAAAGGCAGCGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCCGCTGCCTTTGTTCTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGATTGGCGAGATTGGCTaGAGCTGTGCGTGTCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: AAAAFVLDRVASRWKQGRIGEIG*SCACLS Trigger: ACTCAGACACGCACAGCTTCAGCCAATCTCGCCAAT...CCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAGAACAAAGGCAGCGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR GCA 90 bp | GATAGTCTGGGGCATCCTGGGACAGTCTGCTCCATTTCCACTTGGCCTTCAGGCCATCCTGGGACAGTCTaGTCCATTTCCACTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: DSLGHPGTVCSISTWPSGHPGTV*SISTWP Trigger: AGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATG...GCCTGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCATCACATACACTGGAATGCCTGCTGTCTGCAGTCGGGCACAGAAGCCCATGCTGAGGAAAGTCTaGTTTAGGGACCAGCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: QAITYTGMPAVCSRAQKPMLRKV*FRDQHR Trigger: CCTGTGCTGGTCCCTAAAGCAGACTTTCCTCAGCAT...GGGCTTCTGTGCCCGACTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCTATGCTGCCAGCTCTGTCCCCCGAGTAGCACACGGATTTTAGTGACACTGACTGTCGCTTGCTACTaGCAGGCTGTCCAAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: FLCCQLCPPSSTRILVTLTVACY*QAVQGV Trigger: CACCCCTTGGACAGCCTGGCAGTAGCAAGCGACAGT...CAGTGTCACTAAAATCCGTGTGCTACTCGGGGGACAGAGCTGGCAGCATAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149600.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTGCTGTCTGCAGGGAATGCCTGCTGTCTaGAGTCGGGCACAGAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SEQNLSGHHIHWNACCLQGMPAV*SRAQKP Trigger: GGGCTTCTGTGCCCGACTGCAGACAGCAGGCATTCC...CTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGCCATCACATACACTGGAATGCCTGCTGTCTGCAGTCGGGCACAGAAGCCAGCAGAGTAAACAGTaGCATCTAAGCCCTGATGGC | + |
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Preference number: 2 (lower is better) Translates to: VRPSHTLECLLSAVGHRSQQSKQ*HLSPDG Trigger: GCCATCAGGGCTTAGATGCCACTGTTTACTCTGCTG...GCTTCTGTGCCCGACTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAATTCATTCCAGGTATGTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTAGAGTAGCCAGCAGATaGAAACAGGGCAGGAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ENSFQVCVWVGLGLERLGRVASR*KQGRSG Trigger: ACCACTCCTGCCCTGTTTCCATCTGCTGGCTACTCT...ACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTGGAATGAATTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTGCTTTAGGGACCAGCACAGGACGTGTCAAGGCTGCAGCAGAGTAAACAGTATGCTGAGGAAAGTCTaGTTTAGGGACCAGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: VCFRDQHRTCQGCSRVNSMLRKV*FRDQHR Trigger: CCTGTGCTGGTCCCTAAAGCAGACTTTCCTCAGCAT...ACTGTTTACTCTGCTGCAGCCTTGACACGTCCTGTGCTGGTCCCTAAAGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR CAA 90 bp | CGAAGCAAGTCTGAGTCTGTGTGTACTGATGCGCTGCCTTTTCTGTaGAGACTATCATCGTGCGTCCTACCAGAGGCAATGACCCGAATC | + |
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Preference number: 2 (lower is better) Translates to: RSKSESVCTDALPFL*RLSSCVLPEAMTRI Trigger: GATTCGGGTCATTGCCTCTGGTAGGACGCACGATGATAGTCTCAACAGAAAAGGCAGCGCATCAGTACACACAGACTCAGACTTGCTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAATTCATTCCAGGTATGTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTAGTCTGTGGCAACGATaGGTAAATGACGAAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: ENSFQVCVWVGLGLERLGSLWQR*VNDEAS Trigger: ACTTGCTTCGTCATTTACTCATCGTTGCCACAGACT...ACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTGGAATGAATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAATTCATTCCAGGTATGTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTTACAGCAGCTCTCTTTaGCAAAGTTGTAACACTCAC | + |
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Preference number: 2 (lower is better) Translates to: ENSFQVCVWVGLGLERLGYSSSL*QSCNTH Trigger: GTGAGTGTTACAACTTTGCCAAAGAGAGCTGCTGTA...ACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTGGAATGAATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTTCTCTACTCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTCATCCTGGGACAGTCTaGTCCATTTCCACTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LFSTLNKTCQAITYTGMPHPGTV*SISTWP Trigger: AGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATG...AGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGAGTAGAGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR CCA 72 bp | CTGGGGCATCCTGGGACAGTCTGCTCCATTTCCACTTaGCCTTCAGGCAGCCAAGTGCCCAGCGCGGCTATC | + |
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Preference number: 3 (lower is better) Translates to: LGHPGTVCSIST*PSGSQVPSAAI Trigger: GATAGCCGCGCTGGGCACTTGGCTGCCTGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR GCA 72 bp | TGTCAGGCCATCACATACACTGGAATGCCTGCTGTCTaGAGTCGGGCACAGAAGCCCCACCTCGCCCCATGC | + |
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Preference number: 3 (lower is better) Translates to: CQAITYTGMPAV*SRAQKPHLAPC Trigger: GCATGGGGCGAGGTGGGGCTTCTGTGCCCGACTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR GCA 72 bp | TCAGCCACTCACGTCCTCCTCACTGTCGCTTGCTACTaGCAGGCTGTCCAAGGGGTGGCCGGCATACTCTTG | + |
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Preference number: 3 (lower is better) Translates to: SATHVLLTVACY*QAVQGVAGILL Trigger: CAAGAGTATGCCGGCCACCCCTTGGACAGCCTGGCAGTAGCAAGCGACAGTGAGGAGGACGTGAGTGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149600.8 |
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| 3UTR CCA 72 bp | CAGATGGAAACAGGGCAGGAGTGGTTTGGAGGCGGCTaGCGGGATTGGCGAGATTGGCTGAAGCTGTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: QMETGQEWFGGG*RDWRDWLKLCV Trigger: CACGCACAGCTTCAGCCAATCTCGCCAATCCCGCCAGCCGCCTCCAAACCACTCCTGCCCTGTTTCCATCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR TCA 72 bp | GGTTTGGAGGCGGCTGGCGGGATTGGCGAGATTGGCTaGAGCTGTGCGTGTCTGAGTAGGTTCATGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: GLEAAGGIGEIG*SCACLSRFMAL Trigger: CAGAGCCATGAACCTACTCAGACACGCACAGCTTCAGCCAATCTCGCCAATCCCGCCAGCCGCCTCCAAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR GCA 72 bp | ACAGAAGCCCCACCTCGCCCCATGCTGAGGAAAGTCTaGTTTAGGGACCAGCACAGGACGTGTCAAGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: TEAPPRPMLRKV*FRDQHRTCQGC Trigger: GCAGCCTTGACACGTCCTGTGCTGGTCCCTAAAGCAGACTTTCCTCAGCATGGGGCGAGGTGGGGCTTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR GCA 72 bp | CAAAACCTGTCAGGCCATCACATACACTGGAATGCCTaGTGTCTGCAGTCGGGCACAGAAGCCCCACCTCGC | + |
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Preference number: 3 (lower is better) Translates to: QNLSGHHIHWNA*CLQSGTEAPPR Trigger: GCGAGGTGGGGCTTCTGTGCCCGACTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR-3UTR CAA 90 bp | CCCATGCTGAGGAAAGTCTGCTTTAGGGACCAGCACAGGACGTGTCAAGGCTGCCTGCTCCATTTCCACTaGGCCTTCAGGCAGCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: PMLRKVCFRDQHRTCQGCLLHFH*AFRQPS Trigger: ACTTGGCTGCCTGAAGGCCAAGTGGAAATGGAGCAG...GCAGCCTTGACACGTCCTGTGCTGGTCCCTAAAGCAGACTTTCCTCAGCATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR GCA 72 bp | AGTGACACTGATAGTCTGGGGCATCCTGGGACAGTCTaGTCCATTTCCACTTGGCCTTCAGGCAGCCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: SDTDSLGHPGTV*SISTWPSGSQV Trigger: CACTTGGCTGCCTGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATCAGTGTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR GCA 72 bp | CAGTGGCATCTAAGCCCTGATGGCTCATTCCTATGCTaGCAGCTCTGTCCCCCGAGTAGCACACGGATTTTA | + |
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Preference number: 3 (lower is better) Translates to: QWHLSPDGSFLC*QLCPPSSTRIL Trigger: TAAAATCCGTGTGCTACTCGGGGGACAGAGCTGGCAGCATAGGAATGAGCCATCAGGGCTTAGATGCCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR CCA 72 bp | GCACAGGACGTGTCAAGGCTGCAGCAGAGTAAACAGTaGCATCTAAGCCCTGATGGCTCATTCCTATGCTGC | + |
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Preference number: 3 (lower is better) Translates to: AQDVSRLQQSKQ*HLSPDGSFLCC Trigger: GCAGCATAGGAATGAGCCATCAGGGCTTAGATGCCACTGTTTACTCTGCTGCAGCCTTGACACGTCCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR CCA 72 bp | TACTCTGAACAAAACCTGTCAGGCCATCACATACACTaGAATGCCTGCTGTCTGCAGTCGGGCACAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: YSEQNLSGHHIH*NACCLQSGTEA Trigger: GGCTTCTGTGCCCGACTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTGCTGTCTGCAGCTGCTCCATTTCCACTaGGCCTTCAGGCAGCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: SEQNLSGHHIHWNACCLQLLHFH*AFRQPS Trigger: ACTTGGCTGCCTGAAGGCCAAGTGGAAATGGAGCAG...CTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR CCA 72 bp | CCGAGTAGCACACGGATTTTAGTGACACTGATAGTCTaGGGCATCCTGGGACAGTCTGCTCCATTTCCACTT | + |
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Preference number: 3 (lower is better) Translates to: PSSTRILVTLIV*GILGQSAPFPL Trigger: AAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATCAGTGTCACTAAAATCCGTGTGCTACTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| 3UTR GCA 72 bp | ACTGATGCGCTGCCTTTTCTGTTGAGACTATCATCGTaGGTCCTACCAGAGGCAATGACCCGAATCGATGTT | + |
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Preference number: 3 (lower is better) Translates to: TDALPFLLRLSS*VLPEAMTRIDV Trigger: AACATCGATTCGGGTCATTGCCTCTGGTAGGACGCACGATGATAGTCTCAACAGAAAAGGCAGCGCATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR CCA 72 bp | TACTCACTCACAGAGAATTCATTCCAGGTATGTGTCTaGGTTGGGCTGGGTCTGGAGAGACTGGGTATAAGC | + |
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Preference number: 3 (lower is better) Translates to: YSLTENSFQVCV*VGLGLERLGIS Trigger: GCTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTGGAATGAATTCTCTGTGAGTGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR CAA 90 bp | AATTATTTATCCCTCTGGATGCACCAAAGACCAGTAAAGTTTATAGCTTTTCCAAGGTATGTGTCTGGGTaGGGCTGGGTCTGGAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: NYLSLWMHQRPVKFIAFPRYVSG*GWVWRD Trigger: GTCTCTCCAGACCCAGCCCAACCCAGACACATACCT...TGGAAAAGCTATAAACTTTACTGGTCTTTGGTGCATCCAGAGGGATAAATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR-3UTR CAA 90 bp | AGAACCTTATTTCTTCCTATGAACTTAAGCTGCCTGCGCACAAAAAGTATAAAAGCGCTGCCTTTTCTGTaGAGACTATCATCGTGCGTC | + |
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Preference number: 3 (lower is better) Translates to: RTLFLPMNLSCLRTKSIKALPFL*RLSSCV Trigger: GACGCACGATGATAGTCTCAACAGAAAAGGCAGCGC...TTTTATACTTTTTGTGCGCAGGCAGCTTAAGTTCATAGGAAGAAATAAGGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| 3UTR CAA 72 bp | TGGGTGCTCAGCCACTCACGTCCTCCTCACTGTCGCTaGCTACTGCCAGGCTGTCCAAGGGGTGGCCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: WVLSHSRPPHCR*LLPGCPRGGRH Trigger: ATGCCGGCCACCCCTTGGACAGCCTGGCAGTAGCAAGCGACAGTGAGGAGGACGTGAGTGGCTGAGCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149600.8 |
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| 3UTR CAA 72 bp | TCTGGGGCATCCTGGGACAGTCTGCTCCATTTCCACTaGGCCTTCAGGCAGCCAAGTGCCCAGCGCGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SGASWDSLLHFH*AFRQPSAQRGY Trigger: ATAGCCGCGCTGGGCACTTGGCTGCCTGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| CDS-3UTR CCA 90 bp | GGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTGCCGAGGCAAAAGTTCCCTaGAGTAACAGAGAAGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: GYKLQGRRVPSTAAAAAAEAKVP*SNREGD Trigger: GTCACCTTCTCTGTTACTCCAGGGAACTTTTGCCTC...GGCAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTGGAGCTTATACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| CDS-3UTR CCA 90 bp | CTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTGATGTCAGAAGAGCAATaGCCTCAGTCAGCAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LGISSKAGECPPPLPLPLMSEEQ*PQSAVL Trigger: CAAGACTGCTGACTGAGGCCATTGCTCTTCTGACAT...CAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTGGAGCTTATACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| CDS-3UTR CCA 90 bp | GCTGCCGCTGCCTTTGTTCTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGCATCCTGGCCGGCGCTaGCTCTCTTGGTTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAAAFVLDRVASRWKQGRHPGRR*LSWFQL Trigger: CAGCTGAAACCAAGAGAGCCAGCGCCGGCCAGGATG...CCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAGAACAAAGGCAGCGGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR GCA 90 bp | GATAGTCTGGGGCATCCTGGGACAGTCTGCTCCATTTCCACTTGGCCTTCAGGCACTGTCGCTTGCTACTaGCAGGCTGTCCAAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSLGHPGTVCSISTWPSGTVACY*QAVQGV Trigger: CACCCCTTGGACAGCCTGGCAGTAGCAAGCGACAGT...GCCTGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR GCA 90 bp | GCTGCCGCTGCCTTTGTTCTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGTCACTGCATGCTTTCTaGCTCCCACTGCAGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAAAFVLDRVASRWKQGRSLHAF*LPLQSA Trigger: TGCGCTCTGCAGTGGGAGGCAGAAAGCATGCAGTGA...CCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAGAACAAAGGCAGCGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR CCA 90 bp | ACTGATAGTCTGGGGCATCCTGGGACAGTCTGCTCCATTTCCACTTGGCCTTCACGGCGCTGGCTCTCTTaGTTTCAGCTGCAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDSLGHPGTVCSISTWPSRRWLS*FQLQSC Trigger: GCAGCTCTGCAGCTGAAACCAAGAGAGCCAGCGCCG...TGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR CCA 90 bp | ACTGATAGTCTGGGGCATCCTGGGACAGTCTGCTCCATTTCCACTTGGCCTTCACATCCTGGCCGGCGCTaGCTCTCTTGGTTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDSLGHPGTVCSISTWPSHPGRR*LSWFQL Trigger: CAGCTGAAACCAAGAGAGCCAGCGCCGGCCAGGATG...TGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR TCA 90 bp | GCATCCTGGGACAGTCTGCTCCATTTCCACTTGGCCTTCAGGCAGCCAAGTGCCATGCTCTCTGGGGTCTaGCTGACTCTGCTTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: ASWDSLLHFHLAFRQPSAMLSGV*LTLLLS Trigger: GGATAAAAGCAGAGTCAGTCAGACCCCAGAGAGCAT...GGCACTTGGCTGCCTGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR TCA 90 bp | CTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGAGTGGTTTGGAGGCGGCTATGCTCTCTGGGGTCTaGCTGACTCTGCTTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: LDRVASRWKQGRSGLEAAMLSGV*LTLLLS Trigger: GGATAAAAGCAGAGTCAGTCAGACCCCAGAGAGCAT...AGCCGCCTCCAAACCACTCCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGAGTGGTTTGGAGGCGGCTTTTCAGCTGCAGAGCTaGTGTCAGGAGAATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDRVASRWKQGRSGLEAAFQLQS*CQENPW Trigger: CCAAGGATTCTCCTGACAGCAGCTCTGCAGCTGAAA...AGCCGCCTCCAAACCACTCCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCATCACATACACTGGAATGCCTGCTGTCTGCAGTCGGGCACAGAAGCCCCTGGCCGGCATACTCTTaGTGTTCACAAGATACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPSHTLECLLSAVGHRSPWPAYS*CSQDTA Trigger: AGCTGTATCTTGTGAACAGCAAGAGTATGCCGGCCA...GGGGCTTCTGTGCCCGACTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR GCA 90 bp | CAGGTATGTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGACCGACTTCACTGCATaGTTTCTGCCTCCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVCVWVGLGLERLGISSKTDFTA*FLPPTA Trigger: TGCAGTGGGAGGCAGAAAGCATGCAGTGAAGTCGGT...CTTGGAGCTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGTATAAGCTCCAAGGCAGGAGAGTGCCCTCCACCGCTGCCGCTGCCGCTGATAATTTTCAAGGGCTaGCTGTCTTGGAAATACACA | + |
|
Preference number: 4 (lower is better) Translates to: LGISSKAGECPPPLPLPLIIFKG*LSWKYT Trigger: TGTGTATTTCCAAGACAGCCAGCCCTTGAAAATTAT...CAGCGGCAGCGGCAGCGGTGGAGGGCACTCTCCTGCCTTGGAGCTTATACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTGAGGAAAGTCTGCTTTAGGGACCAGCACAGGACGTGTCAAGGCTGCAGCTCGAGAGATGCTCTCTaGGGTCTGACTGACTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLRKVCFRDQHRTCQGCSSRDAL*GLTDSA Trigger: AGCAGAGTCAGTCAGACCCCAGAGAGCATCTCTCGA...GCTGCAGCCTTGACACGTCCTGTGCTGGTCCCTAAAGCAGACTTTCCTCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR TCA 90 bp | CCCATGCTGAGGAAAGTCTGCTTTAGGGACCAGCACAGGACGTGTCAAGGCTGCTCACTTCTGAGAAGGTaGGGATCCCCTTCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PMLRKVCFRDQHRTCQGCSLLRR*GSPSVL Trigger: AAGAACTGAAGGGGATCCTCACCTTCTCAGAAGTGA...GCAGCCTTGACACGTCCTGTGCTGGTCCCTAAAGCAGACTTTCCTCAGCATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR CCA 90 bp | CTATCACTGAGCGTTAGCATGGGTGCTCAGCCACTCACGTCCTCCTCACTGTCGATGTCAGAAGAGCAATaGCCTCAGTCAGCAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSVSMGAQPLTSSSLSMSEEQ*PQSAVL Trigger: CAAGACTGCTGACTGAGGCCATTGCTCTTCTGACAT...CGACAGTGAGGAGGACGTGAGTGGCTGAGCACCCATGCTAACGCTCAGTGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149600.8 |
||
| CDS-3UTR CCA 90 bp | GATAGTCTGGGGCATCCTGGGACAGTCTGCTCCATTTCCACTTGGCCTTCAGGCGAGGCAAAAGTTCCCTaGAGTAACAGAGAAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSLGHPGTVCSISTWPSGEAKVP*SNREGD Trigger: GTCACCTTCTCTGTTACTCCAGGGAACTTTTGCCTC...GCCTGAAGGCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGTCTGCTTTAGGGACCAGCACAGGACGTGTCAAGGCTGCAGCAGAGTATTTCAGCTGCAGAGCTaGTGTCAGGAGAATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVCFRDQHRTCQGCSRVFQLQS*CQENPW Trigger: CCAAGGATTCTCCTGACAGCAGCTCTGCAGCTGAAA...TACTCTGCTGCAGCCTTGACACGTCCTGTGCTGGTCCCTAAAGCAGACTTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR CCA 90 bp | CAGGTATGTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGCACTGTACACAGAGCTaGTCAAATCCAGCAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVCVWVGLGLERLGISSKHCTQS*SNPAIP Trigger: GGGAATTGCTGGATTTGACCAGCTCTGTGTACAGTG...CTTGGAGCTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCCGCTGCCTTTGTTCTGGATAGAGTAGCCAGCAGATGGAAACAGGGCAGGTGTCAGGAGAATCCTTaGGAAATAGTCTTTTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AAAAFVLDRVASRWKQGRCQENP*EIVFWA Trigger: CGCCCAAAAGACTATTTCCCAAGGATTCTCCTGACA...CCTGCCCTGTTTCCATCTGCTGGCTACTCTATCCAGAACAAAGGCAGCGGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTATGTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGCATCGTGGCAAAGGGTaGCCACTGATAATGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QVCVWVGLGLERLGISSKHRGKG*PLIMLK Trigger: TTTCAACATTATCAGTGGTCACCCTTTGCCACGATG...CTTGGAGCTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTGAGGAAAGTCTGCTTTAGGGACCAGCACAGGACGTGTCAAGGCTGCAGCAAGGTGACTTCCTCTTaGTTTGATGTCAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MLRKVCFRDQHRTCQGCSKVTSS*FDVRRA Trigger: TGCTCTTCTGACATCAAATCAAGAGGAAGTCACCTT...GCTGCAGCCTTGACACGTCCTGTGCTGGTCCCTAAAGCAGACTTTCCTCAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTGCTGTCTGCAGTTCTCTTGGTTTCAGCTaGAGAGCTGCTGTCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNKTCQAITYTGMPAVCSSLGFS*RAAVRR Trigger: TCTCCTGACAGCAGCTCTGCAGCTGAAACCAAGAGA...ACTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR CCA 90 bp | TTCCTATGCTGCCAGCTCTGTCCCCCGAGTAGCACACGGATTTTAGTGACACTGTGTCAGGAGAATCCTTaGGAAATAGTCTTTTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLCCQLCPPSSTRILVTLCQENP*EIVFWA Trigger: CGCCCAAAAGACTATTTCCCAAGGATTCTCCTGACA...CAGTGTCACTAAAATCCGTGTGCTACTCGGGGGACAGAGCTGGCAGCATAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| 3UTR CAA 72 bp | TCTGAGTCTGTGTGTACTGATGCGCTGCCTTTTCTGTaGAGACTATCATCGTGCGTCCTACCAGAGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SESVCTDALPFL*RLSSCVLPEAM Trigger: CATTGCCTCTGGTAGGACGCACGATGATAGTCTCAACAGAAAAGGCAGCGCATCAGTACACACAGACTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR CCA 90 bp | TGTACAGCAGCTCTCTTTGGCAAAGTTGTAACACTCACTTTCTTGGAAATTGTCCGGCGCTGGCTCTCTTaGTTTCAGCTGCAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTAALFGKVVTLTFLEIVRRWLS*FQLQSC Trigger: GCAGCTCTGCAGCTGAAACCAAGAGAGCCAGCGCCG...GACAATTTCCAAGAAAGTGAGTGTTACAACTTTGCCAAAGAGAGCTGCTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| CDS-3UTR GCA 90 bp | TGTACAGCAGCTCTCTTTGGCAAAGTTGTAACACTCACTTTCTTGGAAATTGTCACTGTCGCTTGCTACTaGCAGGCTGTCCAAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CTAALFGKVVTLTFLEIVTVACY*QAVQGV Trigger: CACCCCTTGGACAGCCTGGCAGTAGCAAGCGACAGT...GACAATTTCCAAGAAAGTGAGTGTTACAACTTTGCCAAAGAGAGCTGCTGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| CDS-3UTR CCA 90 bp | TCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTGCTGTCTGCAGGGACGTAGCCATACGTaGAATGACAAGAATTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SEQNLSGHHIHWNACCLQGRSHT*NDKNSQ Trigger: CTGTGAATTCTTGTCATTCCACGTATGGCTACGTCC...CTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
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| CDS-3UTR CCA 90 bp | CTCTACTCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTGCTGTGAGGCAAAAGTTCCCTaGAGTAACAGAGAAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LYSEQNLSGHHIHWNACCEAKVP*SNREGD Trigger: GTCACCTTCTCTGTTACTCCAGGGAACTTTTGCCTC...ACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGAGTAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| CDS-3UTR CCA 90 bp | CTCTACTCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTGCTGTCACTGTACACAGAGCTaGTCAAATCCAGCAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LYSEQNLSGHHIHWNACCHCTQS*SNPAIP Trigger: GGGAATTGCTGGATTTGACCAGCTCTGTGTACAGTG...ACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGAGTAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR TCA 90 bp | GAGAATTCATTCCAGGTATGTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTAAAGATTGGCAGAACTaGCTTTATTGCCAATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ENSFQVCVWVGLGLERLGKDWQN*LYCQFA Trigger: TGCAAATTGGCAATAAAGTCAGTTCTGCCAATCTTT...ACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTGGAATGAATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR TCA 90 bp | TCTACTCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTGCTGTCGACTTCCTCTTGATTTaGTGTCAGAAGAGCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: STLNKTCQAITYTGMPAVDFLLI*CQKSNG Trigger: GCCATTGCTCTTCTGACATCAAATCAAGAGGAAGTC...GACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGAGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCTTTAGGGACCAGCACAGGACGTGTCAAGGCTGCAGCAGAGTAAACAGTATAATTTTCAAGGGCTaGCTGTCTTGGAAATACACA | + |
|
Preference number: 4 (lower is better) Translates to: VCFRDQHRTCQGCSRVNSIIFKG*LSWKYT Trigger: TGTGTATTTCCAAGACAGCCAGCCCTTGAAAATTAT...ACTGTTTACTCTGCTGCAGCCTTGACACGTCCTGTGCTGGTCCCTAAAGCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
||
| CDS-3UTR CCA 90 bp | AGTGACACTGATAGTCTGGGGCATCCTGGGACAGTCTGCTCCATTTCCACTTGGCTCAGTCAGCAGTCTTaGTTTAATCATCAGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: SDTDSLGHPGTVCSISTWLSQQS*FNHQDI Trigger: AATATCCTGATGATTAAACCAAGACTGCTGACTGAG...CCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATCAGTGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTCTCTACTCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTATGTCAGAAGAGCAATaGCCTCAGTCAGCAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSTLNKTCQAITYTGMPMSEEQ*PQSAVL Trigger: CAAGACTGCTGACTGAGGCCATTGCTCTTCTGACAT...AGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGAGTAGAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTGCTGTCTGCATAATTTTCAAGGGCTaGCTGTCTTGGAAATACACA | + |
|
Preference number: 4 (lower is better) Translates to: TLNKTCQAITYTGMPAVCIIFKG*LSWKYT Trigger: TGTGTATTTCCAAGACAGCCAGCCCTTGAAAATTAT...GCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTCTCTACTCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTAAGGTGACTTCCTCTTaGTTTGATGTCAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSTLNKTCQAITYTGMPKVTSS*FDVRRA Trigger: TGCTCTTCTGACATCAAATCAAGAGGAAGTCACCTT...AGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGAGTAGAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCTACTCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTGCTAAAGATTGGCAGAACTaGCTTTATTGCCAATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSTLNKTCQAITYTGMPAKDWQN*LYCQFA Trigger: TGCAAATTGGCAATAAAGTCAGTTCTGCCAATCTTT...AGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGAGTAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR CCA 90 bp | AGAACCTTATTTCTTCCTATGAACTTAAGCTGCCTGCGCACAAAAAGTATAAAATCGAGAGATGCTCTCTaGGGTCTGACTGACTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLFLPMNLSCLRTKSIKSRDAL*GLTDSA Trigger: AGCAGAGTCAGTCAGACCCCAGAGAGCATCTCTCGA...TTTTATACTTTTTGTGCGCAGGCAGCTTAAGTTCATAGGAAGAAATAAGGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR TCA 90 bp | AACTGTTTCTTTATTCACAACCTTTTCTCTACTCTGAACAAAACCTGTCAGGCCCATCGTGGCAAAGGGTaGCCACTGATAATGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NCFFIHNLFSTLNKTCQAHRGKG*PLIMLK Trigger: TTTCAACATTATCAGTGGTCACCCTTTGCCACGATG...GGCCTGACAGGTTTTGTTCAGAGTAGAGAAAAGGTTGTGAATAAAGAAACAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS-3UTR GCA 90 bp | AGAACCTTATTTCTTCCTATGAACTTAAGCTGCCTGCGCACAAAAAGTATAAAATCTCTTGGTTTCAGCTaGAGAGCTGCTGTCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLFLPMNLSCLRTKSIKSLGFS*RAAVRR Trigger: TCTCCTGACAGCAGCTCTGCAGCTGAAACCAAGAGA...TTTTATACTTTTTGTGCGCAGGCAGCTTAAGTTCATAGGAAGAAATAAGGTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR TCA 90 bp | GGCAATGACCCGAATCGATGTTGGAAATATAACTTATGCAGGAATAGTTCTTGTAAGGTGACTTCCTCTTaGTTTGATGTCAGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNDPNRCWKYNLCRNSSCKVTSS*FDVRRA Trigger: TGCTCTTCTGACATCAAATCAAGAGGAAGTCACCTT...ACAAGAACTATTCCTGCATAAGTTATATTTCCAACATCGATTCGGGTCATTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS-3UTR TCA 90 bp | AATTATTTATCCCTCTGGATGCACCAAAGACCAGTAAAGTTTATAGCTTTTCCATCACTTCTGAGAAGGTaGGGATCCCCTTCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NYLSLWMHQRPVKFIAFPSLLRR*GSPSVL Trigger: AAGAACTGAAGGGGATCCTCACCTTCTCAGAAGTGA...TGGAAAAGCTATAAACTTTACTGGTCTTTGGTGCATCCAGAGGGATAAATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS GCA 90 bp | TGTCATCCTGGCCGGCGCTGGCTCTCTTGGTTTCAGCTGCAGAGCTaGTGTCAGGAGAATCCTTGGGAAATAGTCTTTTGGGCGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CHPGRRWLSWFQLQS*CQENPWEIVFWALL Trigger: GAGCAGCGCCCAAAAGACTATTTCCCAAGGATTCTCCTGACAGCAGCTCTGCAGCTGAAACCAAGAGAGCCAGCGCCGGCCAGGATGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
||
| CDS CCA 90 bp | GGGTCCTCCTCACTGTCGCTTGCTACTGCCAGGCTGTCCAAGGGGTaGCCGGCATACTCTTGCTGTTCACAAGATACAGCTCCAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GSSSLSLATARLSKG*PAYSCCSQDTAPKN Trigger: GTTCTTTGGAGCTGTATCTTGTGAACAGCAAGAGTATGCCGGCCACCCCTTGGACAGCCTGGCAGTAGCAAGCGACAGTGAGGAGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
||
| CDS CCA 90 bp | ACGTCCTCCTCACTGTCGCTTGCTACTGCCAGGCTGTCCAAGGGGTaGCCGGCATACTCTTGCTGTTCACAAGATACAGCTCCAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSSSLSLATARLSKG*PAYSCCSQDTAPKN Trigger: GTTCTTTGGAGCTGTATCTTGTGAACAGCAAGAGTATGCCGGCCACCCCTTGGACAGCCTGGCAGTAGCAAGCGACAGTGAGGAGGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
||
| CDS CCA 90 bp | TGGCTCTCTTGGTTTCAGCTGCAGAGCTGCTGTCAGGAGAATCCTTaGGAAATAGTCTTTTGGGCGCTGCTCGAGAGATGCTCTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WLSWFQLQSCCQENP*EIVFWALLERCSLG Trigger: CCCCAGAGAGCATCTCTCGAGCAGCGCCCAAAAGACTATTTCCCAAGGATTCTCCTGACAGCAGCTCTGCAGCTGAAACCAAGAGAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
||
| CDS CCA 90 bp | TTTCAGGCACTTCGAAGATGTCATCCTGGCCGGCGCTGGCTCTCTTaGTTTCAGCTGCAGAGCTGCTGTCAGGAGAATCCTTGGGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: FQALRRCHPGRRWLS*FQLQSCCQENPWEI Trigger: TATTTCCCAAGGATTCTCCTGACAGCAGCTCTGCAGCTGAAACCAAGAGAGCCAGCGCCGGCCAGGATGACATCTTCGAAGTGCCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS GCA 90 bp | TCGCTTGCTACTGCCAGGCTGTCCAAGGGGTGGCCGGCATACTCTTaGTGTTCACAAGATACAGCTCCAAAGAACATGCAGGAAAACTTC | + |
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Preference number: 5 (lower is better) Translates to: SLATARLSKGWPAYS*CSQDTAPKNMQENF Trigger: GAAGTTTTCCTGCATGTTCTTTGGAGCTGTATCTTGTGAACAGCAAGAGTATGCCGGCCACCCCTTGGACAGCCTGGCAGTAGCAAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS-3UTR CAA 90 bp | CAGGTATGTGTCTGGGTTGGGCTGGGTCTGGAGAGACTGGGTATAAGCTCCAAGCAAGGGCTGGCTGTCTaGGAAATACACATTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: QVCVWVGLGLERLGISSKQGLAV*EIHIVS Trigger: ACTCACAATGTGTATTTCCAAGACAGCCAGCCCTTG...CTTGGAGCTTATACCCAGTCTCTCCAGACCCAGCCCAACCCAGACACATACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| CDS-3UTR CAA 90 bp | GTGACACTGATAGTCTGGGGCATCCTGGGACAGTCTGCTCCATTTCCACTTGGCCAAGGGCTGGCTGTCTaGGAAATACACATTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: VTLIVWGILGQSAPFPLGQGLAV*EIHIVS Trigger: ACTCACAATGTGTATTTCCAAGACAGCCAGCCCTTG...GCCAAGTGGAAATGGAGCAGACTGTCCCAGGATGCCCCAGACTATCAGTGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| CDS-3UTR CAA 90 bp | GTGTCAAGGCTGCAGCAGAGTAAACAGTGGCATCTAAGCCCTGATGGCTCATTCCTGTCAGGAGAATCCTaGGGAAATAGTCTTTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: VSRLQQSKQWHLSPDGSFLSGES*GNSLLG Trigger: GCCCAAAAGACTATTTCCCAAGGATTCTCCTGACAG...GAATGAGCCATCAGGGCTTAGATGCCACTGTTTACTCTGCTGCAGCCTTGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049009.7 |
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| CDS-3UTR CAA 90 bp | GATGCGCTGCCTTTTCTGTTGAGACTATCATCGTGCGTCCTACCAGAGGCAATGCTGTCAGGAGAATCCTaGGGAAATAGTCTTTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: DALPFLLRLSSCVLPEAMLSGES*GNSLLG Trigger: GCCCAAAAGACTATTTCCCAAGGATTCTCCTGACAG...CATTGCCTCTGGTAGGACGCACGATGATAGTCTCAACAGAAAAGGCAGCGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| CDS-3UTR CAA 90 bp | TCTGAACAAAACCTGTCAGGCCATCACATACACTGGAATGCCTGCTGTCTGCAGCAAGGGCTGGCTGTCTaGGAAATACACATTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: SEQNLSGHHIHWNACCLQQGLAV*EIHIVS Trigger: ACTCACAATGTGTATTTCCAAGACAGCCAGCCCTTG...CTGCAGACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000149600.8 |
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| CDS TCA 90 bp | ACAAGATACAGCTCCAAAGAACATGCAGGAAAACTTCCTGAGGTGTaGAGGGCTCCGCTCTTCCTCCATGTCACTAACAACACTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TRYSSKEHAGKLPEV*RAPLFLHVTNNTFR Trigger: CCTGAAAGTGTTGTTAGTGACATGGAGGAAGAGCGGAGCCCTTCACACCTCAGGAAGTTTTCCTGCATGTTCTTTGGAGCTGTATCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS TCA 90 bp | TTGAGGCAAAAGTTCCCTGGAGTAACAGAGAAGGTGACTTCCTCTTaGTTTGATGTCAGAAGAGCAATGGCCTCAGTCAGCAGTCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LRQKFPGVTEKVTSS*FDVRRAMASVSSLG Trigger: ACCAAGACTGCTGACTGAGGCCATTGCTCTTCTGACATCAAATCAAGAGGAAGTCACCTTCTCTGTTACTCCAGGGAACTTTTGCCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 ENSMUST00000149600.8 |
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| CDS TCA 90 bp | GCAAAAGTTCCCTGGAGTAACAGAGAAGGTGACTTCCTCTTGATTTaGTGTCAGAAGAGCAATGGCCTCAGTCAGCAGTCTTGGTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: AKVPWSNREGDFLLI*CQKSNGLSQQSWFN Trigger: ATTAAACCAAGACTGCTGACTGAGGCCATTGCTCTTCTGACATCAAATCAAGAGGAAGTCACCTTCTCTGTTACTCCAGGGAACTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 ENSMUST00000149600.8 |
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| CDS TCA 90 bp | TTCAGTTCTTTAAAGCAAAATGTTATCTCGGTATCAAGTCCAACCTaGAAGAAGTCAAACTCTTCCGGGCCAAAAGACATCTCACTGTAC | + |
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Preference number: 5 (lower is better) Translates to: FSSLKQNVISVSSPT*KKSNSSGPKDISLY Trigger: GTACAGTGAGATGTCTTTTGGCCCGGAAGAGTTTGACTTCTTTCAGGTTGGACTTGATACCGAGATAACATTTTGCTTTAAAGAACTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS CAA 72 bp | GAACCAGAGCAGCTGAGGGGTCCTCCTCACTGTCGCTaGCTACTGCCAGGCTGTCCAAGGGGTGGCCGGCAT | + |
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Preference number: 6 (lower is better) Translates to: EPEQLRGPPHCR*LLPGCPRGGRH Trigger: ATGCCGGCCACCCCTTGGACAGCCTGGCAGTAGCAAGCGACAGTGAGGAGGACCCCTCAGCTGCTCTGGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| CDS CAA 90 bp | AGCGCACAGGAACCAGAGCAGCTGAGGGGTCCTCCTCACTGTCGCTaGCTACTGCCAGGCTGTCCAAGGGGTGGCCGGCATACTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SAQEPEQLRGPPHCR*LLPGCPRGGRHTLA Trigger: AGCAAGAGTATGCCGGCCACCCCTTGGACAGCCTGGCAGTAGCAAGCGACAGTGAGGAGGACCCCTCAGCTGCTCTGGTTCCTGTGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117263.8 |
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| CDS CCA 72 bp | CTTCGAAGATGTCATCCTGGCCGGCGCTGGCTCTCTTaGTTTCAGCTGCAGAGCTGCTGTCAGGAGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: LRRCHPGRRWLS*FQLQSCCQENP Trigger: AGGATTCTCCTGACAGCAGCTCTGCAGCTGAAACCAAGAGAGCCAGCGCCGGCCAGGATGACATCTTCGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS CCA 72 bp | TTTCAGGCACTTCGAAGATGTCATCCTGGCCGGCGCTaGCTCTCTTGGTTTCAGCTGCAGAGCTGCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: FQALRRCHPGRR*LSWFQLQSCCQ Trigger: CTGACAGCAGCTCTGCAGCTGAAACCAAGAGAGCCAGCGCCGGCCAGGATGACATCTTCGAAGTGCCTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS CAA 72 bp | ACTTCGAAGATGTCATCCTGGCCGGCGCTGGCTCTCTaGGTTTCAGCTGCAGAGCTGCTGTCAGGAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: TSKMSSWPALAL*VSAAELLSGES Trigger: GGATTCTCCTGACAGCAGCTCTGCAGCTGAAACCAAGAGAGCCAGCGCCGGCCAGGATGACATCTTCGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS GCA 72 bp | GGCCGGCGCTGGCTCTCTTGGTTTCAGCTGCAGAGCTaGTGTCAGGAGAATCCTTGGGAAATAGTCTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GRRWLSWFQLQS*CQENPWEIVFW Trigger: CCAAAAGACTATTTCCCAAGGATTCTCCTGACAGCAGCTCTGCAGCTGAAACCAAGAGAGCCAGCGCCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS CAA 90 bp | CTGGCTCTCTTGGTTTCAGCTGCAGAGCTGCTGTCAGGAGAATCCTaGGGAAATAGTCTTTTGGGCGCTGCTCGAGAGATGCTCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LALLVSAAELLSGES*GNSLLGAAREMLSG Trigger: CCCAGAGAGCATCTCTCGAGCAGCGCCCAAAAGACTATTTCCCAAGGATTCTCCTGACAGCAGCTCTGCAGCTGAAACCAAGAGAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS CAA 90 bp | CTTTCAGGCACTTCGAAGATGTCATCCTGGCCGGCGCTGGCTCTCTaGGTTTCAGCTGCAGAGCTGCTGTCAGGAGAATCCTTGGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: LSGTSKMSSWPALAL*VSAAELLSGESLGN Trigger: ATTTCCCAAGGATTCTCCTGACAGCAGCTCTGCAGCTGAAACCAAGAGAGCCAGCGCCGGCCAGGATGACATCTTCGAAGTGCCTGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS GCA 72 bp | ACTGCCAGGCTGTCCAAGGGGTGGCCGGCATACTCTTaGTGTTCACAAGATACAGCTCCAAAGAACATGCAG | + |
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Preference number: 6 (lower is better) Translates to: TARLSKGWPAYS*CSQDTAPKNMQ Trigger: CTGCATGTTCTTTGGAGCTGTATCTTGTGAACAGCAAGAGTATGCCGGCCACCCCTTGGACAGCCTGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS CCA 72 bp | TGGTTTCAGCTGCAGAGCTGCTGTCAGGAGAATCCTTaGGAAATAGTCTTTTGGGCGCTGCTCGAGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: WFQLQSCCQENP*EIVFWALLERC Trigger: GCATCTCTCGAGCAGCGCCCAAAAGACTATTTCCCAAGGATTCTCCTGACAGCAGCTCTGCAGCTGAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS TCA 72 bp | AGCTCCAAAGAACATGCAGGAAAACTTCCTGAGGTGTaGAGGGCTCCGCTCTTCCTCCATGTCACTAACAAC | + |
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Preference number: 6 (lower is better) Translates to: SSKEHAGKLPEV*RAPLFLHVTNN Trigger: GTTGTTAGTGACATGGAGGAAGAGCGGAGCCCTTCACACCTCAGGAAGTTTTCCTGCATGTTCTTTGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS TCA 72 bp | AAGATACAGCTCCAAAGAACATGCAGGAAAACTTCCTaGGGTGTGAAGGGCTCCGCTCTTCCTCCATGTCAC | + |
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Preference number: 6 (lower is better) Translates to: KIQLQRTCRKTS*GVKGSALPPCH Trigger: GTGACATGGAGGAAGAGCGGAGCCCTTCACACCTCAGGAAGTTTTCCTGCATGTTCTTTGGAGCTGTATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS TCA 72 bp | CCCTGGAGTAACAGAGAAGGTGACTTCCTCTTGATTTaGTGTCAGAAGAGCAATGGCCTCAGTCAGCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PWSNREGDFLLI*CQKSNGLSQQS Trigger: AGACTGCTGACTGAGGCCATTGCTCTTCTGACATCAAATCAAGAGGAAGTCACCTTCTCTGTTACTCCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 ENSMUST00000149600.8 |
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| CDS CAA 72 bp | GAGCTGGTCAAATCCAGCAATTCCCCACTCAAACTCTaGAGGCAAAAGTTCCCTGGAGTAACAGAGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: ELVKSSNSPLKL*RQKFPGVTEKV Trigger: CACCTTCTCTGTTACTCCAGGGAACTTTTGCCTCAAGAGTTTGAGTGGGGAATTGCTGGATTTGACCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS CAA 90 bp | CTGTACACAGAGCTGGTCAAATCCAGCAATTCCCCACTCAAACTCTaGAGGCAAAAGTTCCCTGGAGTAACAGAGAAGGTGACTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LYTELVKSSNSPLKL*RQKFPGVTEKVTSS Trigger: AGAGGAAGTCACCTTCTCTGTTACTCCAGGGAACTTTTGCCTCAAGAGTTTGAGTGGGGAATTGCTGGATTTGACCAGCTCTGTGTACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS TCA 72 bp | AAGTTCCCTGGAGTAACAGAGAAGGTGACTTCCTCTTaGTTTGATGTCAGAAGAGCAATGGCCTCAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: KFPGVTEKVTSS*FDVRRAMASVS Trigger: GCTGACTGAGGCCATTGCTCTTCTGACATCAAATCAAGAGGAAGTCACCTTCTCTGTTACTCCAGGGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 ENSMUST00000149600.8 |
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| CDS TCA 72 bp | TTAAAGCAAAATGTTATCTCGGTATCAAGTCCAACCTaGAAGAAGTCAAACTCTTCCGGGCCAAAAGACATC | + |
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Preference number: 6 (lower is better) Translates to: LKQNVISVSSPT*KKSNSSGPKDI Trigger: GATGTCTTTTGGCCCGGAAGAGTTTGACTTCTTTCAGGTTGGACTTGATACCGAGATAACATTTTGCTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 |
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| CDS CAA 72 bp | CATCTAAAGATTGGCAGAACTGACTTTATTGCCAATTaGCAATTTAAATTCAGTGGTAAGTCAGTATCACTC | + |
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Preference number: 6 (lower is better) Translates to: HLKIGRTDFIAN*QFKFSGKSVSL Trigger: GAGTGATACTGACTTACCACTGAATTTAAATTGCAAATTGGCAATAAAGTCAGTTCTGCCAATCTTTAGATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049009.7 ENSMUST00000117263.8 ENSMUST00000144268.2 |
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