Pregenerated sensors for RAD9A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024824Ensembl transcript IDs: ENSMUST00000025740.8, ENSMUST00000237278.2, ENSMUST00000237723.2, ENSMUST00000237923.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCTCCCTCCCACCAGCACCTGTGGTGGCTGCAAGTGGAATCCTaGGGCCAAGGCTGCAGCTCAGGGCAATGGCAGACCAGATTGTGG | + |
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Preference number: 1 (lower is better) Translates to: RAPSHQHLWWLQVES*GQGCSSGQWQTRLW Trigger: CCACAATCTGGTCTGCCATTGCCCTGAGCTGCAGCCTTGGCCCCAGGATTCCACTTGCAGCCACCACAGGTGCTGGTGGGAGGGAGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR GCA 90 bp | GATGACCCGCCGGCCACGGCCAATGCCCAGTGTCACCTCAGTCAATaGAAGGGGAAAGGACAGAACAGCCTCTGCCAGAACCCGTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: DDPPATANAQCHLSQ*KGKGQNSLCQNPCW Trigger: CCAGCACGGGTTCTGGCAGAGGCTGTTCTGTCCTTTCCCCTTGCATTGACTGAGGTGACACTGGGCATTGGCCGTGGCCGGCGGGTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR TCA 90 bp | GACAGAACAGCCTCTGCCAGAACCCGTGCTGGGGTGCGCAATAAGTaGGGGCATGAGGCTGGGTCGAAGACAGCCTGCAGGGACTCACAG | + |
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Preference number: 1 (lower is better) Translates to: DRTASARTRAGVRNK*GHEAGSKTACRDSQ Trigger: CTGTGAGTCCCTGCAGGCTGTCTTCGACCCAGCCTCATGCCCTCACTTATTGCGCACCCCAGCACGGGTTCTGGCAGAGGCTGTTCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR GCA 90 bp | CACCAGCACCTGTGGTGGCTGCAAGTGGAATCCTGGGGCCAAGGCTaGAGCTCAGGGCAATGGCAGACCAGATTGTGGGTCTCCAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: HQHLWWLQVESWGQG*SSGQWQTRLWVSSL Trigger: AAGGCTGGAGACCCACAATCTGGTCTGCCATTGCCCTGAGCTGCAGCCTTGGCCCCAGGATTCCACTTGCAGCCACCACAGGTGCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR TCA 90 bp | GTGGGCCAGCAGTTCTTTGGTACAAAGCCACCTGGGAGGGCAGACTaGGTGGCTGAACATGGGCCCAGCCAGGGCAACACCAGTGACACA | + |
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Preference number: 1 (lower is better) Translates to: VGQQFFGTKPPGRAD*VAEHGPSQGNTSDT Trigger: TGTGTCACTGGTGTTGCCCTGGCTGGGCCCATGTTCAGCCACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR GCA 90 bp | CAAGGGGAAAGGACAGAACAGCCTCTGCCAGAACCCGTGCTGGGGTaGGCAATAAGTGAGGGCATGAGGCTGGGTCGAAGACAGCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: QGERTEQPLPEPVLG*AISEGMRLGRRQPA Trigger: TGCAGGCTGTCTTCGACCCAGCCTCATGCCCTCACTTATTGCGCACCCCAGCACGGGTTCTGGCAGAGGCTGTTCTGTCCTTTCCCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR CCA 90 bp | GCCAGCAGTTCTTTGGTACAAAGCCACCTGGGAGGGCAGACTGAGTaGCTGAACATGGGCCCAGCCAGGGCAACACCAGTGACACACAAT | + |
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Preference number: 1 (lower is better) Translates to: ASSSLVQSHLGGQTE*LNMGPARATPVTHN Trigger: ATTGTGTGTCACTGGTGTTGCCCTGGCTGGGCCCATGTTCAGCCACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR CCA 90 bp | AGCTCAGGGCAATGGCAGACCAGATTGTGGGTCTCCAGCCTTGCATaGCTGGCAGCCAGATCCTGGGGCAACCCATCTGGTCTCTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: SSGQWQTRLWVSSLA*LAARSWGNPSGLLN Trigger: ATTCAAGAGACCAGATGGGTTGCCCCAGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATTGCCCTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR CCA 90 bp | GGGCATGAGGCTGGGTCGAAGACAGCCTGCAGGGACTCACAGTCCTaGAAGGAGAGGTTGTGTGTCTTCTTGACCCCATACTTGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: GHEAGSKTACRDSQS*KERLCVFLTPYLQW Trigger: CCACTGCAAGTATGGGGTCAAGAAGACACACAACCTCTCCTTCCAGGACTGTGAGTCCCTGCAGGCTGTCTTCGACCCAGCCTCATGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR TCA 90 bp | CATACTTGCAGTGGAGCTGGACCACCAGGTGGCTGTGGCTGCCACTaGGGGAGATACAGCACTTCTCCACAGACTTCTCCACAATTGCCA | + |
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Preference number: 1 (lower is better) Translates to: HTCSGAGPPGGCGCH*GRYSTSPQTSPQLP Trigger: TGGCAATTGTGGAGAAGTCTGTGGAGAAGTGCTGTATCTCCCTCAGTGGCAGCCACAGCCACCTGGTGGTCCAGCTCCACTGCAAGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR GCA 90 bp | GCCACTGAGGGAGATACAGCACTTCTCCACAGACTTCTCCACAATTaGCAGAGAGCGGAAGACGGACAGGAAGGCCTTCATCAGGATCTT | + |
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Preference number: 1 (lower is better) Translates to: ATEGDTALLHRLLHN*QRAEDGQEGLHQDL Trigger: AAGATCCTGATGAAGGCCTTCCTGTCCGTCTTCCGCTCTCTGGCAATTGTGGAGAAGTCTGTGGAGAAGTGCTGTATCTCCCTCAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR CCA 90 bp | ACCAGATTGTGGGTCTCCAGCCTTGCATGGCTGGCAGCCAGATCCTaGGGCAACCCATCTGGTCTCTTGAATAAAGGTCAAAGCTGGATT | + |
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Preference number: 1 (lower is better) Translates to: TRLWVSSLAWLAARS*GNPSGLLNKGQSWI Trigger: AATCCAGCTTTGACCTTTATTCAAGAGACCAGATGGGTTGCCCCAGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR CCA 90 bp | AGATCCTGGGGCAACCCATCTGGTCTCTTGAATAAAGGTCAAAGCTaGATTCTCACCATAGCCTCTGTCTCTCTTGTCCCGTCCCAGACA | + |
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Preference number: 1 (lower is better) Translates to: RSWGNPSGLLNKGQS*ILTIASVSLVPSQT Trigger: TGTCTGGGACGGGACAAGAGAGACAGAGGCTATGGTGAGAATCCAGCTTTGACCTTTATTCAAGAGACCAGATGGGTTGCCCCAGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR TCA 90 bp | CTGGCTTTGGCCAGAATTTGTATTCTAGAGCCTCAAAGTAAAGGATaGGGGATCTGTCAGGTGACAGGTGGGCACCAGAGACATGATTGG | + |
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Preference number: 1 (lower is better) Translates to: LALARICILEPQSKG*GICQVTGGHQRHDW Trigger: CCAATCATGTCTCTGGTGCCCACCTGTCACCTGACAGATCCCTCATCCTTTACTTTGAGGCTCTAGAATACAAATTCTGGCCAAAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGGGGAAAGGACAGAACAGCCTCTGCCAGAACCCGTGCTGGGGTGCGCAACAGCGCAGCAGGTCCTaGCCAGGGGAAGCCGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: CKGKGQNSLCQNPCWGAQQRSRS*PGEAAW Trigger: CCAGGCGGCTTCCCCTGGTCAGGACCTGCTGCGCTG...TTGCGCACCCCAGCACGGGTTCTGGCAGAGGCTGTTCTGTCCTTTCCCCTTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCCACGGCCAATGCCCAGTGTCACCTCAGTCAATGCAAGGGGAAAGGACAGAAGCCGCCTGGTACTaGTGGAAGAAGAGTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: AGHGQCPVSPQSMQGERTEAAWY*WKKSGA Trigger: TGCCCCACTCTTCTTCCAGCAGTACCAGGCGGCTTC...TGTCCTTTCCCCTTGCATTGACTGAGGTGACACTGGGCATTGGCCGTGGCCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGGGGAAAGGACAGAACAGCCTCTGCCAGAACCCGTGCTGGGGTGCGCAAACCACCAGGTGGCTGTaGCTGCCACTGAGGGAGATA | + |
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Preference number: 2 (lower is better) Translates to: CKGKGQNSLCQNPCWGAQTTRWL*LPLREI Trigger: TATCTCCCTCAGTGGCAGCCACAGCCACCTGGTGGT...TTGCGCACCCCAGCACGGGTTCTGGCAGAGGCTGTTCTGTCCTTTCCCCTTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGGGGAAAGGACAGAACAGCCTCTGCCAGAACCCGTGCTGGGGTGCGCAAGCCGCCTGGTACTGCTaGAAGAAGAGTGGGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: CKGKGQNSLCQNPCWGAQAAWYC*KKSGAK Trigger: TTTTGCCCCACTCTTCTTCCAGCAGTACCAGGCGGC...TTGCGCACCCCAGCACGGGTTCTGGCAGAGGCTGTTCTGTCCTTTCCCCTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTGTCACCTCAGTCAATGCAAGGGGAAAGGACAGAACAGCCTCTGCCAGAAGCTGGACCACCAGGTaGCTGTGGCTGCCACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PSVTSVNARGKDRTASARSWTTR*LWLPLR Trigger: CCTCAGTGGCAGCCACAGCCACCTGGTGGTCCAGCT...TCTGGCAGAGGCTGTTCTGTCCTTTCCCCTTGCATTGACTGAGGTGACACTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR CAA 90 bp | CCTCTGTCTCTCTTGTCCCGTCCCAGACAGTGGGCCAGCAGTTCTTaGGTACAAAGCCACCTGGGAGGGCAGACTGAGTGGCTGAACATG | + |
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Preference number: 2 (lower is better) Translates to: PLSLLSRPRQWASSS*VQSHLGGQTEWLNM Trigger: CATGTTCAGCCACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGGGACGGGACAAGAGAGACAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR CAA 90 bp | GGGTCGAAGACAGCCTGCAGGGACTCACAGTCCTGGAAGGAGAGGTaGTGTGTCTTCTTGACCCCATACTTGCAGTGGAGCTGGACCACC | + |
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Preference number: 2 (lower is better) Translates to: GSKTACRDSQSWKER*CVFLTPYLQWSWTT Trigger: GGTGGTCCAGCTCCACTGCAAGTATGGGGTCAAGAAGACACACAACCTCTCCTTCCAGGACTGTGAGTCCCTGCAGGCTGTCTTCGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTCTCTTGTCCCGTCCCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGGGAGGGCAGACTGAGTaGCTGAACATGGGCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SVSLVPSQTVGQQFFGTKGGQTE*LNMGPA Trigger: GGCTGGGCCCATGTTCAGCCACTCAGTCTGCCCTCC...CTTTGTACCAAAGAACTGCTGGCCCACTGTCTGGGACGGGACAAGAGAGACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCCACGGCCAATGCCCAGTGTCACCTCAGTCAATGCAAGGGGAAAGGACAAGGGACTCACAGTCCTaGAAGGAGAGGTTGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: AGHGQCPVSPQSMQGERTRDSQS*KERLCV Trigger: GACACACAACCTCTCCTTCCAGGACTGTGAGTCCCT...TGTCCTTTCCCCTTGCATTGACTGAGGTGACACTGGGCATTGGCCGTGGCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGGTTCCTAGGCAGCTCTaGAGCAGACAGCCAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SVRKEKQFLWPTGGSGGEVPRQL*SRQPSG Trigger: CCCACTTGGCTGTCTGCTGCAGAGCTGCCTAGGAAC...CTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTCCTAACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTGTCACCTCAGTCAATGCAAGGGGAAAGGACAGAACAGCCTCTGCCAGATACTTGCAGTGGAGCTaGACCACCAGGTGGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PSVTSVNARGKDRTASARYLQWS*TTRWLW Trigger: CCACAGCCACCTGGTGGTCCAGCTCCACTGCAAGTA...TCTGGCAGAGGCTGTTCTGTCCTTTCCCCTTGCATTGACTGAGGTGACACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGTACAAAGCCACCTGGGAGGGCAGACTGAGTGGCTGAACATGGGCCCAGCCCAGCCAAGTGGGGTATaGCTTTTTCCATTTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: LVQSHLGGQTEWLNMGPAQPSGV*LFPFPC Trigger: ACATGGAAATGGAAAAAGGCATACCCCACTTGGCTG...GGCTGGGCCCATGTTCAGCCACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGACTCACAGTCCTGGAAGGAGAGGTTGTGTGTCTTCTTGACCCCATACTTGCCAGGGGAAGCCGCCTaGTACTGCTGGAAGAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RDSQSWKERLCVFLTPYLPGEAA*YCWKKS Trigger: ACTCTTCTTCCAGCAGTACCAGGCGGCTTCCCCTGG...CAAGTATGGGGTCAAGAAGACACACAACCTCTCCTTCCAGGACTGTGAGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGCCACCTGGGAGGGCAGACTGGAGGGTGTTCAATACTaGTCTTCCTGTTTTAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PDSGPAVLWYKATWEGRLEGVQY*SSCFRG Trigger: GCCTCTAAAACAGGAAGATCAGTATTGAACACCCTC...CAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGGCAACCCATCTGGTCTCTTGAATAAAGGTCAAAGCTGGATTCTCACCATACTCAGTGGGCGGGCCTaGTTCTGGTCCGTGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: WGNPSGLLNKGQSWILTILSGRA*FWSVSL Trigger: AAGGCTCACGGACCAGAAGCAGGCCCGCCCACTGAG...TATGGTGAGAATCCAGCTTTGACCTTTATTCAAGAGACCAGATGGGTTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR CAA 90 bp | CTTGCATGGCTGGCAGCCAGATCCTGGGGCAACCCATCTGGTCTCTaGAATAAAGGTCAAAGCTGGATTCTCACCATAGCCTCTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LAWLAARSWGNPSGL*NKGQSWILTIASVS Trigger: AGAGACAGAGGCTATGGTGAGAATCCAGCTTTGACCTTTATTCAAGAGACCAGATGGGTTGCCCCAGGATCTGGCTGCCAGCCATGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTACAAAGCCACCTGGGAGGGCAGACTGAGTGGCTGAACATGGGCCCAGCCAGGAAGCTAAGTTTCTaGCTTTGGCCAGAATTTGTA | + |
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Preference number: 2 (lower is better) Translates to: LVQSHLGGQTEWLNMGPARKLSF*LWPEFV Trigger: TACAAATTCTGGCCAAAGCCAGAAACTTAGCTTCCT...GGCTGGGCCCATGTTCAGCCACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGTTCATGATCCTCAAAGTAAAGGATaGGGGATCTGTCAGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: ERETVPLAHRRVWRGVHDPQSKG*GICQVT Trigger: TGTCACCTGACAGATCCCTCATCCTTTACTTTGAGG...ATCATGAACTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR CCA 90 bp | AGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCAACACAGACCAAACATaGTTCCTAGGCAGCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RILGQGPSVRKEKQFLWPNTDQT*FLGSSA Trigger: TGCAGAGCTGCCTAGGAACCATGTTTGGTCTGTGTT...GGGCCAAAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTCTCTTGTCCCGTCCCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGCACCAGAGACATGATTaGTATAGGCTGAATAAATAC | + |
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Preference number: 2 (lower is better) Translates to: SVSLVPSQTVGQQFFGTKHQRHD*YRLNKY Trigger: GTATTTATTCAGCCTATACCAATCATGTCTCTGGTG...CTTTGTACCAAAGAACTGCTGGCCCACTGTCTGGGACGGGACAAGAGAGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR TCA 90 bp | GCTATTAGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTTGGTCCGTGAGCCTTTaGACACAGACTTTAATTTCT | + |
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Preference number: 2 (lower is better) Translates to: AIRILGQGPSVRKEKQFLWSVSL*TQTLIS Trigger: AGAAATTAAAGTCTGTGTTCAAAGGCTCACGGACCA...AAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCTAATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR TCA 72 bp | GCCTCTGCCAGAACCCGTGCTGGGGTGCGCAATAAGTaGGGGCATGAGGCTGGGTCGAAGACAGCCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: ASARTRAGVRNK*GHEAGSKTACR Trigger: CCTGCAGGCTGTCTTCGACCCAGCCTCATGCCCTCACTTATTGCGCACCCCAGCACGGGTTCTGGCAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR CCA 72 bp | GGCAGACCAGATTGTGGGTCTCCAGCCTTGCATGGCTaGCAGCCAGATCCTGGGGCAACCCATCTGGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: GRPDCGSPALHG*QPDPGATHLVS Trigger: AGAGACCAGATGGGTTGCCCCAGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR CCA 72 bp | CAAGGCTGCAGCTCAGGGCAATGGCAGACCAGATTGTaGGTCTCCAGCCTTGCATGGCTGGCAGCCAGATCC | + |
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Preference number: 3 (lower is better) Translates to: QGCSSGQWQTRL*VSSLAWLAARS Trigger: GGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATTGCCCTGAGCTGCAGCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR GCA 72 bp | AGGACAGAACAGCCTCTGCCAGAACCCGTGCTGGGGTaGGCAATAAGTGAGGGCATGAGGCTGGGTCGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RTEQPLPEPVLG*AISEGMRLGRR Trigger: TCTTCGACCCAGCCTCATGCCCTCACTTATTGCGCACCCCAGCACGGGTTCTGGCAGAGGCTGTTCTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR GCA 72 bp | CCGGCCACGGCCAATGCCCAGTGTCACCTCAGTCAATaGAAGGGGAAAGGACAGAACAGCCTCTGCCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: PATANAQCHLSQ*KGKGQNSLCQN Trigger: GTTCTGGCAGAGGCTGTTCTGTCCTTTCCCCTTGCATTGACTGAGGTGACACTGGGCATTGGCCGTGGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR CCA 72 bp | TCTTTGGTACAAAGCCACCTGGGAGGGCAGACTGAGTaGCTGAACATGGGCCCAGCCAGGGCAACACCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SLVQSHLGGQTE*LNMGPARATPV Trigger: CACTGGTGTTGCCCTGGCTGGGCCCATGTTCAGCCACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR CCA 72 bp | TCTTGTCCCGTCCCAGACAGTGGGCCAGCAGTTCTTTaGTACAAAGCCACCTGGGAGGGCAGACTGAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SCPVPDSGPAVL*YKATWEGRLSG Trigger: GCCACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGGGACGGGACAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR CCA 72 bp | CAATGGCAGACCAGATTGTGGGTCTCCAGCCTTGCATaGCTGGCAGCCAGATCCTGGGGCAACCCATCTGGT | + |
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Preference number: 3 (lower is better) Translates to: QWQTRLWVSSLA*LAARSWGNPSG Trigger: ACCAGATGGGTTGCCCCAGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCTGGGGTGCGCAATAAGTGAGGGCATGAGGCTGGGTCGAAGACAGCCTGCACAGACTTCTCCACAATaGCCAGAGAGCGGAAGACGG | + |
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Preference number: 3 (lower is better) Translates to: VLGCAISEGMRLGRRQPAQTSPQ*PESGRR Trigger: CCGTCTTCCGCTCTCTGGCAATTGTGGAGAAGTCTG...TGCAGGCTGTCTTCGACCCAGCCTCATGCCCTCACTTATTGCGCACCCCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR CCA 72 bp | TTGTGTGTCTTCTTGACCCCATACTTGCAGTGGAGCTaGACCACCAGGTGGCTGTGGCTGCCACTGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LCVFLTPYLQWS*TTRWLWLPLRE Trigger: CTCCCTCAGTGGCAGCCACAGCCACCTGGTGGTCCAGCTCCACTGCAAGTATGGGGTCAAGAAGACACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR CCA 72 bp | GAGAGGTTGTGTGTCTTCTTGACCCCATACTTGCAGTaGAGCTGGACCACCAGGTGGCTGTGGCTGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: ERLCVFLTPYLQ*SWTTRWLWLPL Trigger: CAGTGGCAGCCACAGCCACCTGGTGGTCCAGCTCCACTGCAAGTATGGGGTCAAGAAGACACACAACCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGAGGGCATGAGGCTGGGTCGAAGACAGCCTGCAGGGACTCACAGTCCTGGAAGGTTGTGTGTCTTCTaGACCCCATACTTGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: SEGMRLGRRQPAGTHSPGRLCVF*TPYLQW Trigger: CCACTGCAAGTATGGGGTCAAGAAGACACACAACCT...TCCAGGACTGTGAGTCCCTGCAGGCTGTCTTCGACCCAGCCTCATGCCCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| 3UTR CCA 72 bp | GCTGGGTCGAAGACAGCCTGCAGGGACTCACAGTCCTaGAAGGAGAGGTTGTGTGTCTTCTTGACCCCATAC | + |
|
Preference number: 3 (lower is better) Translates to: AGSKTACRDSQS*KERLCVFLTPY Trigger: GTATGGGGTCAAGAAGACACACAACCTCTCCTTCCAGGACTGTGAGTCCCTGCAGGCTGTCTTCGACCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
||
| 3UTR CCA 72 bp | TGGGTCTCCAGCCTTGCATGGCTGGCAGCCAGATCCTaGGGCAACCCATCTGGTCTCTTGAATAAAGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: WVSSLAWLAARS*GNPSGLLNKGQ Trigger: TTGACCTTTATTCAAGAGACCAGATGGGTTGCCCCAGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| 3UTR TCA 72 bp | ATGCCTTTTTCCATTTCCATGTCCATGTCTAAGGACTaGCGCCCAACTCAGTGGGCGGGCCTGCTTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: MPFSISMSMSKD*RPTQWAGLLLV Trigger: GACCAGAAGCAGGCCCGCCCACTGAGTTGGGCGTCAGTCCTTAGACATGGACATGGAAATGGAAAAAGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| 3UTR GCA 72 bp | GGAGATACAGCACTTCTCCACAGACTTCTCCACAATTaGCAGAGAGCGGAAGACGGACAGGAAGGCCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GDTALLHRLLHN*QRAEDGQEGLH Trigger: ATGAAGGCCTTCCTGTCCGTCTTCCGCTCTCTGGCAATTGTGGAGAAGTCTGTGGAGAAGTGCTGTATCTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
||
| 3UTR CCA 72 bp | GAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTaGCGGGGAGTTCATGATTGGCAGAGGGTGTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ERETVPLAHRRV*RGVHDWQRVFN Trigger: ATTGAACACCCTCTGCCAATCATGAACTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| 3UTR CCA 72 bp | CAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTTaGCCCACAGGAGGGTCTGGCGGGGAGTTCATGATT | + |
|
Preference number: 3 (lower is better) Translates to: QGPSVRKEKQFL*PTGGSGGEFMI Trigger: AATCATGAACTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGGCAGACCAGATTGTGGGTCTCCAGCCTTGCATGGCTGGCAGCCAGATCCTGCTAAGTTTCTGGCTTaGGCCAGAATTTGTATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: NGRPDCGSPALHGWQPDPAKFLA*ARICIL Trigger: TAGAATACAAATTCTGGCCAAAGCCAGAAACTTAGC...AGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| 3UTR CCA 72 bp | ATCTGTCAGGTGACAGGTGGGCACCAGAGACATGATTaGTATAGGCTGAATAAATACAGAACACAGACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ICQVTGGHQRHD*YRLNKYRTQTK Trigger: TTTGGTCTGTGTTCTGTATTTATTCAGCCTATACCAATCATGTCTCTGGTGCCCACCTGTCACCTGACAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGGGTAGCTGCGCAGGATaGCCCGCCGGCCACGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVRKEKQFLWPTGGSGGEGSCAG*PAGHGQ Trigger: TTGGCCGTGGCCGGCGGGTCATCCTGCGCAGCTACC...CTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTCCTAACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| 3UTR CAA 72 bp | GGCCAAGGCTGCAGCTCAGGGCAATGGCAGACCAGATaGTGGGTCTCCAGCCTTGCATGGCTGGCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQGCSSGQWQTR*WVSSLAWLAAR Trigger: TCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATTGCCCTGAGCTGCAGCCTTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTACAAAGCCACCTGGGAGGGCAGACTGAGTGGCTGAACATGGGCCCAGCCCTCAGCTTCCTCCTCTaGGGTGGGGGCAAGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LVQSHLGGQTEWLNMGPALSFLL*GGGKVM Trigger: CATGACCTTGCCCCCACCTCAGAGGAGGAAGCTGAG...GGCTGGGCCCATGTTCAGCCACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGCCACCTGGGAGGGCAGACTGCAGCCAGCACAGGGTTaGGACCCTGCGGGGAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PDSGPAVLWYKATWEGRLQPAQG*DPAGSV Trigger: TACACTCCCCGCAGGGTCCCAACCCTGTGCTGGCTG...CAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | TCCCGTCCCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGCCACCTGGGAGGGCCAGGGGAAGCCGCCTaGTACTGCTGGAAGAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRPRQWASSSLVQSHLGGPGEAA*YCWKKS Trigger: ACTCTTCTTCCAGCAGTACCAGGCGGCTTCCCCTGG...CCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGGGACGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| 3UTR CAA 72 bp | CTCTTGTCCCGTCCCAGACAGTGGGCCAGCAGTTCTTaGGTACAAAGCCACCTGGGAGGGCAGACTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSRPRQWASSS*VQSHLGGQTEW Trigger: CCACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGGGACGGGACAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR TCA 90 bp | AGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCCAGCGCAGCAGGTCCTaGCCAGGGGAAGCCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RILGQGPSVRKEKQFLWPQRSRS*PGEAAW Trigger: CCAGGCGGCTTCCCCTGGTCAGGACCTGCTGCGCTG...GGGCCAAAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | GGGGAAAGGACAGAACAGCCTCTGCCAGAACCCGTGCTGGGGTGCGCAATAAGTGCGAATGGACAGCCTTaGCCAGCACCTTCACGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GERTEQPLPEPVLGCAISANGQP*PAPSRC Trigger: GCAACGTGAAGGTGCTGGGCAAGGCTGTCCATTCGC...ACTTATTGCGCACCCCAGCACGGGTTCTGGCAGAGGCTGTTCTGTCCTTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGTTCATGGGATGTGGAAGGCTGTaGCCCGGAGCCCTCATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKEKQFLWPTGGSGGEFMGCGRL*PGALIA Trigger: GGCAATGAGGGCTCCGGGGCACAGCCTTCCACATCC...CATGAACTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTCTCTTGTCCCGTCCCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGACAGGGTTGGGACCCTaGGGGGAGTGTACAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSLVPSQTVGQQFFGTKTGLGP*GECTGA Trigger: GGCCCCTGTACACTCCCCGCAGGGTCCCAACCCTGT...CTTTGTACCAAAGAACTGCTGGCCCACTGTCTGGGACGGGACAAGAGAGACAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGAGCTGGACCACCAGGTaGCTGTGGCTGCCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVRKEKQFLWPTGGSGGESWTTR*LWLPLR Trigger: CCTCAGTGGCAGCCACAGCCACCTGGTGGTCCAGCT...CTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTCCTAACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGGGCCAGGGAGACAGGTaGGAGGGATGTGGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVRKEKQFLWPTGGSGGEGQGDR*EGCGRL Trigger: CAGCCTTCCACATCCCTCCCACCTGTCTCCCTGGCC...CTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTCCTAACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTACAAAGCCACCTGGGAGGGCAGACTGAGTGGCTGAACATGGGCCCAGCCGTGAACGAAACTTCTTaGGTGGGGGAGTCCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVQSHLGGQTEWLNMGPAVNETS*VGESQA Trigger: TGCCTGGGACTCCCCCACCCAAGAAGTTTCGTTCAC...GGCTGGGCCCATGTTCAGCCACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCAGACCAGATTGTGGGTCTCCAGCCTTGCATGGCTGGCAGCCAGATCCTGAAGCCGCCTGGTACTaGTGGAAGAAGAGTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGRPDCGSPALHGWQPDPEAAWY*WKKSGA Trigger: TGCCCCACTCTTCTTCCAGCAGTACCAGGCGGCTTC...AGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | CCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGCCACCTGGGAGGGCAGACTGCAGTCACCATGGCTTTaGTGGTGCTGTCTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PDSGPAVLWYKATWEGRLQSPWL*WCCLPP Trigger: AGGAGGCAGACAGCACCAGCAAAGCCATGGTGACTG...CAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCAGACCAGATTGTGGGTCTCCAGCCTTGCATGGCTGGCAGCCAGATCCTTCTGGGGCATGCAGCTaGTGGAAGTCCTCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGRPDCGSPALHGWQPDPSGACS*WKSSSP Trigger: TGGGGATGAGGACTTCCAGCAGCTGCATGCCCCAGA...AGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | CCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGCCACCTGGGAGGGCAGACTGATCCCTTCTGGGGCATaGAGCTGCTGGAAGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PDSGPAVLWYKATWEGRLIPSGA*SCWKSS Trigger: TGAGGACTTCCAGCAGCTGCATGCCCCAGAAGGGAT...CAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAGGGCAACACCAGTGACACACAATCAGGTCCAGAGGCTATTAGGATTCGGGTCGAAGACAGCCTaGAGGGACTCACAGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PARATPVTHNQVQRLLGFGSKTA*RDSQSW Trigger: CCAGGACTGTGAGTCCCTGCAGGCTGTCTTCGACCC...GAATCCTAATAGCCTCTGGACCTGATTGTGTGTCACTGGTGTTGCCCTGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTAGGCAGCTCTGCAGCAGACAGCCAAGTGGGGTATGCCTTTTTCCATTTCGCCGGCCACGGCCAATaGCCAGTGTCACCTCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLGSSAADSQVGYAFFHFAGHGQ*PVSPQS Trigger: TGACTGAGGTGACACTGGGCATTGGCCGTGGCCGGC...GAAATGGAAAAAGGCATACCCCACTTGGCTGTCTGCTGCAGAGCTGCCTAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACCAAACATGGTTCCTAGGCAGCTCTGCAGCAGACAGCCAAGTGGGGTATCTTCCTCCTCTGAGGTaGGGGCAAGGTCATGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDQTWFLGSSAADSQVGYLPPLR*GQGHGR Trigger: CCTCCCATGACCTTGCCCCCACCTCAGAGGAGGAAG...ATACCCCACTTGGCTGTCTGCTGCAGAGCTGCCTAGGAACCATGTTTGGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCAGACCAGATTGTGGGTCTCCAGCCTTGCATGGCTGGCAGCCAGATCCTTTTGCTGGTGCTGTCTaGCTCCTCTTCCTGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NGRPDCGSPALHGWQPDPFAGAV*LLFLVA Trigger: AGCTACCAGGAAGAGGAGGCAGACAGCACCAGCAAA...AGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGTTCATGGCCGCCTGGTACTGCTaGAAGAAGAGTGGGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKEKQFLWPTGGSGGEFMAAWYC*KKSGAK Trigger: TTTTGCCCCACTCTTCTTCCAGCAGTACCAGGCGGC...CATGAACTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACCAAACATGGTTCCTAGGCAGCTCTGCAGCAGACAGCCAAGTGGGGTATTACTTGCAGTGGAGCTaGACCACCAGGTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDQTWFLGSSAADSQVGYYLQWS*TTRWLW Trigger: CCACAGCCACCTGGTGGTCCAGCTCCACTGCAAGTA...ATACCCCACTTGGCTGTCTGCTGCAGAGCTGCCTAGGAACCATGTTTGGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGTTCATGATACCCCATACTTGCAGTaGAGCTGGACCACCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERETVPLAHRRVWRGVHDTPYLQ*SWTTRW Trigger: CCACCTGGTGGTCCAGCTCCACTGCAAGTATGGGGT...ATCATGAACTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCAGACCAGATTGTGGGTCTCCAGCCTTGCATGGCTGGCAGCCAGATCCTTCACCATGGCTTTGCTaGTGCTGTCTGCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NGRPDCGSPALHGWQPDPSPWLC*CCLPPL Trigger: AAGAGGAGGCAGACAGCACCAGCAAAGCCATGGTGA...AGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTCTCTTGTCCCGTCCCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGGGGGAACACGGGCCCTaGGAACATGAGTCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSLVPSQTVGQQFFGTKGEHGP*EHESCS Trigger: AGAGCAAGACTCATGTTCCCAGGGCCCGTGTTCCCC...CTTTGTACCAAAGAACTGCTGGCCCACTGTCTGGGACGGGACAAGAGAGACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | AGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCGTGGGGGCAAGGTCATaGGAGGCCAGGGAGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RILGQGPSVRKEKQFLWPVGARS*EARETG Trigger: ACCTGTCTCCCTGGCCTCCCATGACCTTGCCCCCAC...GGGCCAAAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGTTCATGATTCCCAGGCACTGTACTaGGCTCAGCTTCCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERETVPLAHRRVWRGVHDSQALY*AQLPPL Trigger: CAGAGGAGGAAGCTGAGCCCAGTACAGTGCCTGGGA...ATCATGAACTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| 3UTR CAA 72 bp | GACTCACAGTCCTGGAAGGAGAGGTTGTGTGTCTTCTaGACCCCATACTTGCAGTGGAGCTGGACCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSQSWKERLCVF*TPYLQWSWTTR Trigger: CCTGGTGGTCCAGCTCCACTGCAAGTATGGGGTCAAGAAGACACACAACCTCTCCTTCCAGGACTGTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
||
| CDS-3UTR TCA 90 bp | AATGGCAGACCAGATTGTGGGTCTCCAGCCTTGCATGGCTGGCAGCCAGATCCTAAGAGGCAAATTCGCTaGCTCTGCAAAGCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NGRPDCGSPALHGWQPDPKRQIR*LCKAQE Trigger: CTCCTGAGCTTTGCAGAGTCAGCGAATTTGCCTCTT...AGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | AGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCGTGGGGTGTGCTGTGTaGCTGCTTCTGAGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RILGQGPSVRKEKQFLWPVGCAV*LLLRHW Trigger: CCAGTGCCTCAGAAGCAGGCACACAGCACACCCCAC...GGGCCAAAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | AGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCCCCCGGAGCCCTCATTaGCTCCAGTGGTTTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RILGQGPSVRKEKQFLWPPRSPH*LQWFPW Trigger: CCATGGAAACCACTGGAGGCAATGAGGGCTCCGGGG...GGGCCAAAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCT 54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGTTCATGTGGTCTCAGTCACCATaGCTTTGCTGGTGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKEKQFLWPTGGSGGEFMWSQSP*LCWCCL Trigger: CAGACAGCACCAGCAAAGCCATGGTGACTGAGACCA...CATGAACTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | AGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCGCGAATGGACAGCCTTaGCCAGCACCTTCACGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RILGQGPSVRKEKQFLWPANGQP*PAPSRC Trigger: GCAACGTGAAGGTGCTGGGCAAGGCTGTCCATTCGC...GGGCCAAAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCAGACCAGATTGTGGGTCTCCAGCCTTGCATGGCTGGCAGCCAGATCCTTGTCACCTCAGTCAATaGAAGGGGAAAGGACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NGRPDCGSPALHGWQPDPCHLSQ*KGKGQN Trigger: GTTCTGTCCTTTCCCCTTGCATTGACTGAGGTGACA...AGGATCTGGCTGCCAGCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAGGGCAACACCAGTGACACACAATCAGGTCCAGAGGCTATTAGGATTCCATCTAAGTGGGGTGTaGTGTGTGCCTGCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PARATPVTHNQVQRLLGFHLSGV*CVPASE Trigger: CTCAGAAGCAGGCACACAGCACACCCCACTTAGATG...GAATCCTAATAGCCTCTGGACCTGATTGTGTGTCACTGGTGTTGCCCTGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | AGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCACCACCAGGTGGCTGTaGCTGCCACTGAGGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: RILGQGPSVRKEKQFLWPTTRWL*LPLREI Trigger: TATCTCCCTCAGTGGCAGCCACAGCCACCTGGTGGT...GGGCCAAAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTCTCTTGTCCCGTCCCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGAGGGACTCACAGTCCTaGAAGGAGAGGTTGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSLVPSQTVGQQFFGTKRDSQS*KERLCV Trigger: GACACACAACCTCTCCTTCCAGGACTGTGAGTCCCT...CTTTGTACCAAAGAACTGCTGGCCCACTGTCTGGGACGGGACAAGAGAGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGGCAGCTCTGCAGCAGACAGCCAAGTGGGGTATGCCTTTTTCCATTTCGACAGCTATCCCTTCTaGGGCATGCAGCTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLGSSAADSQVGYAFFHFDSYPF*GMQLLE Trigger: TTCCAGCAGCTGCATGCCCCAGAAGGGATAGCTGTC...GAAATGGAAAAAGGCATACCCCACTTGGCTGTCTGCTGCAGAGCTGCCTAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
||
| 3UTR CAA 72 bp | CTGGCAGCCAGATCCTGGGGCAACCCATCTGGTCTCTaGAATAAAGGTCAAAGCTGGATTCTCACCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAARSWGNPSGL*NKGQSWILTIA Trigger: GGCTATGGTGAGAATCCAGCTTTGACCTTTATTCAAGAGACCAGATGGGTTGCCCCAGGATCTGGCTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CCA 90 bp | ACAGACCAAACATGGTTCCTAGGCAGCTCTGCAGCAGACAGCCAAGTGGGGTATGTAAAGTCATCTAAGTaGGGTGTGCTGTGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDQTWFLGSSAADSQVGYVKSSK*GVLCAC Trigger: GCAGGCACACAGCACACCCCACTTAGATGACTTTAC...ATACCCCACTTGGCTGTCTGCTGCAGAGCTGCCTAGGAACCATGTTTGGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR TCA 90 bp | GCTATTAGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTGGCTGTGGCTGCCACTaGGGGAGATACAGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIRILGQGPSVRKEKQFLGCGCH*GRYSTS Trigger: AGAAGTGCTGTATCTCCCTCAGTGGCAGCCACAGCC...AAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCTAATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CCA 90 bp | AGACAGCCAAGTGGGGTATGCCTTTTTCCATTTCCATGTCCATGTCTAAGGACTCCTCATCCCCAATGCTaGTCTCAGTCACCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQPSGVCLFPFPCPCLRTPHPQC*SQSPWL Trigger: AAGCCATGGTGACTGAGACCAGCATTGGGGATGAGG...AGTCCTTAGACATGGACATGGAAATGGAAAAAGGCATACCCCACTTGGCTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CCA 90 bp | GAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGTTCATGATCCTGGAACATCGAAGTaGATAGTAAGAGGCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ERETVPLAHRRVWRGVHDPGTSK*IVRGKF Trigger: GAATTTGCCTCTTACTATCCACTTCGATGTTCCAGG...ATCATGAACTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CCA 90 bp | GCTATTAGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTGTGGCCAAGACAAAGTaGGCATCCAGCAAGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: AIRILGQGPSVRKEKQFLVAKTK*ASSKES Trigger: GGATTCCTTGCTGGATGCCCACTTTGTCTTGGCCAC...AAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCTAATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CCA 90 bp | AGACAGCCAAGTGGGGTATGCCTTTTTCCATTTCCATGTCCATGTCTAAGGACTCTTGCTCTAAGAGTGTaGCCAAGACAAAGTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQPSGVCLFPFPCPCLRTLALRV*PRQSGH Trigger: ATGCCCACTTTGTCTTGGCCACACTCTTAGAGCAAG...AGTCCTTAGACATGGACATGGAAATGGAAAAAGGCATACCCCACTTGGCTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CCA 90 bp | TCCTGGGGCAACCCATCTGGTCTCTTGAATAAAGGTCAAAGCTGGATTCTCACCCTCCAGTGGTTTCCATaGCAATCATGTAACAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SWGNPSGLLNKGQSWILTLQWFP*QSCNSQ Trigger: TTGACTGTTACATGATTGCCATGGAAACCACTGGAG...GGTGAGAATCCAGCTTTGACCTTTATTCAAGAGACCAGATGGGTTGCCCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CCA 90 bp | AGACAGCCAAGTGGGGTATGCCTTTTTCCATTTCCATGTCCATGTCTAAGGACTCCTCATTGCCTCCAGTaGTTTCCATGGCAATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RQPSGVCLFPFPCPCLRTPHCLQ*FPWQSC Trigger: ACATGATTGCCATGGAAACCACTGGAGGCAATGAGG...AGTCCTTAGACATGGACATGGAAATGGAAAAAGGCATACCCCACTTGGCTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CCA 90 bp | TGGGGGCAAGGTCATGGGAGGCCAGGGAGACAGGTGGGAGGGATGTaGAAGGCTGTGCCCCGGAGCCCTCATTGCCTCCAGTGGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WGQGHGRPGRQVGGM*KAVPRSPHCLQWFP Trigger: TGGAAACCACTGGAGGCAATGAGGGCTCCGGGGCACAGCCTTCCACATCCCTCCCACCTGTCTCCCTGGCCTCCCATGACCTTGCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CAA 90 bp | CAGGATCTTACAGCGCAGCAGGTCCTGACCAGGGGAAGCCGCCTGGTACTGCTGCCCAGCACCTTCACGTaGCCCCCGGTGATCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QDLTAQQVLTRGSRLVLLPSTFT*PPVIRH Trigger: GTGCCTGATCACCGGGGGCAACGTGAAGGTGCTGGG...CAGCAGTACCAGGCGGCTTCCCCTGGTCAGGACCTGCTGCGCTGTAAGATCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| CDS TCA 90 bp | CTTTGCTGGTGCTGTCTGCCTCCTCTTCCTGGTAGCTGCGCAGGATaGCCCGCCGGCCACGGCCAATGCCCAGTGTCACCTCAGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LCWCCLPPLPGSCAG*PAGHGQCPVSPQSM Trigger: CATTGACTGAGGTGACACTGGGCATTGGCCGTGGCCGGCGGGTCATCCTGCGCAGCTACCAGGAAGAGGAGGCAGACAGCACCAGCAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CAA 90 bp | CCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGCCACCTGGGAGGGCAGACTGTCAGCCAGCACAGGGTaGGGACCCTGCGGGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PDSGPAVLWYKATWEGRLSASTG*GPCGEC Trigger: ACACTCCCCGCAGGGTCCCAACCCTGTGCTGGCTGA...CAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CAA 90 bp | CCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGCCACCTGGGAGGGCAGACTGGCCCCGGAGCCCTCATaGCCTCCAGTGGTTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PDSGPAVLWYKATWEGRLAPEPS*PPVVSM Trigger: CATGGAAACCACTGGAGGCAATGAGGGCTCCGGGGC...CAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CAA 90 bp | CCAGACAGTGGGCCAGCAGTTCTTTGGTACAAAGCCACCTGGGAGGGCAGACTGAGTGAACGAAACTTCTaGGGTGGGGGAGTCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PDSGPAVLWYKATWEGRLSERNF*GGGVPG Trigger: GCCTGGGACTCCCCCACCCAAGAAGTTTCGTTCACT...CAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCACTGTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CCA 90 bp | GAGCCCCCGAAATTCCTTGAGGCAGAAGGTGACAGCTATCCCTTCTaGGGCATGCAGCTGCTGGAAGTCCTCATCCCCAATGCTGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EPPKFLEAEGDSYPF*GMQLLEVLIPNAGL Trigger: GAGACCAGCATTGGGGATGAGGACTTCCAGCAGCTGCATGCCCCAGAAGGGATAGCTGTCACCTTCTGCCTCAAGGAATTTCGGGGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025740.8 ENSMUST00000237723.2 |
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| CDS GCA 90 bp | TCCTTGAGGCAGAAGGTGACAGCTATCCCTTCTGGGGCATGCAGCTaGTGGAAGTCCTCATCCCCAATGCTGGTCTCAGTCACCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLRQKVTAIPSGACS*WKSSSPMLVSVTMA Trigger: AGCCATGGTGACTGAGACCAGCATTGGGGATGAGGACTTCCAGCAGCTGCATGCCCCAGAAGGGATAGCTGTCACCTTCTGCCTCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS GCA 90 bp | CGAAATTCCTTGAGGCAGAAGGTGACAGCTATCCCTTCTGGGGCATaGAGCTGCTGGAAGTCCTCATCCCCAATGCTGGTCTCAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: RNSLRQKVTAIPSGA*SCWKSSSPMLVSVT Trigger: GGTGACTGAGACCAGCATTGGGGATGAGGACTTCCAGCAGCTGCATGCCCCAGAAGGGATAGCTGTCACCTTCTGCCTCAAGGAATTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025740.8 ENSMUST00000237723.2 |
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| CDS GCA 90 bp | GACTGGGCCCAAGCCGATGTCCGAACAACCCAAGAGATAATAAACTaGGCCGGAATATCTGTCCACCATCCCCCGTCCTTCAAGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DWAQADVRTTQEIIN*AGISVHHPPSFKGS Trigger: GGAACCCTTGAAGGACGGGGGATGGTGGACAGATATTCCGGCGCAGTTTATTATCTCTTGGGTTGTTCGGACATCGGCTTGGGCCCAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| CDS CCA 90 bp | TTGAGGCAGAAGGTGACAGCTATCCCTTCTGGGGCATGCAGCTGCTaGAAGTCCTCATCCCCAATGCTGGTCTCAGTCACCATGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRQKVTAIPSGACSC*KSSSPMLVSVTMAL Trigger: CAAAGCCATGGTGACTGAGACCAGCATTGGGGATGAGGACTTCCAGCAGCTGCATGCCCCAGAAGGGATAGCTGTCACCTTCTGCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CAA 90 bp | AGTGTTAGGAAAGAGAAACAGTTCCTTTGGCCCACAGGAGGGTCTGGCGGGGAGCAGACTTCTCCACAATaGCCAGAGAGCGGAAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: SVRKEKQFLWPTGGSGGEQTSPQ*PESGRR Trigger: CCGTCTTCCGCTCTCTGGCAATTGTGGAGAAGTCTG...CTCCCCGCCAGACCCTCCTGTGGGCCAAAGGAACTGTTTCTCTTTCCTAACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CAA 90 bp | GCTATTAGGATTCTAGGCCAAGGCCCAAGTGTTAGGAAAGAGAAACAGTTCCTTCCCAGCACCTTCACGTaGCCCCCGGTGATCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AIRILGQGPSVRKEKQFLPSTFT*PPVIRH Trigger: GTGCCTGATCACCGGGGGCAACGTGAAGGTGCTGGG...AAGGAACTGTTTCTCTTTCCTAACACTTGGGCCTTGGCCTAGAATCCTAATAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CAA 90 bp | TCCTGGGGCAACCCATCTGGTCTCTTGAATAAAGGTCAAAGCTGGATTCTCACCAGGTTGTGTGTCTTCTaGACCCCATACTTGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWGNPSGLLNKGQSWILTRLCVF*TPYLQW Trigger: CCACTGCAAGTATGGGGTCAAGAAGACACACAACCT...GGTGAGAATCCAGCTTTGACCTTTATTCAAGAGACCAGATGGGTTGCCCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS-3UTR CAA 90 bp | TGGGGCAACCCATCTGGTCTCTTGAATAAAGGTCAAAGCTGGATTCTCACCATATCCTGGAAGGAGAGGTaGTGTGTCTTCTTGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WGNPSGLLNKGQSWILTISWKER*CVFLTP Trigger: TGGGGTCAAGAAGACACACAACCTCTCCTTCCAGGA...TATGGTGAGAATCCAGCTTTGACCTTTATTCAAGAGACCAGATGGGTTGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CCA 90 bp | GAATCCTCAATAGTAAAGATGACTGGCCTGCCTGGAACATCGAAGTaGATAGTAAGAGGCAAATTCGCTGACTCTGCAAAGCTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESSIVKMTGLPGTSK*IVRGKFADSAKLRS Trigger: GCTCCTGAGCTTTGCAGAGTCAGCGAATTTGCCTCTTACTATCCACTTCGATGTTCCAGGCAGGCCAGTCATCTTTACTATTGAGGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025740.8 ENSMUST00000237723.2 |
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| CDS TCA 72 bp | TGCTGTCTGCCTCCTCTTCCTGGTAGCTGCGCAGGATaGCCCGCCGGCCACGGCCAATGCCCAGTGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: CCLPPLPGSCAG*PAGHGQCPVSP Trigger: AGGTGACACTGGGCATTGGCCGTGGCCGGCGGGTCATCCTGCGCAGCTACCAGGAAGAGGAGGCAGACAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CCA 72 bp | ACCCTTCACCATCACTGTCTTCAGCCAGCACAGGGTTaGGACCCTGCGGGGAGTGTACAGGGGCCAGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: TLHHHCLQPAQG*DPAGSVQGPGW Trigger: CCATCCTGGCCCCTGTACACTCCCCGCAGGGTCCCAACCCTGTGCTGGCTGAAGACAGTGATGGTGAAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CAA 72 bp | AGCTCGTCCCCGATTCGGGATAGCGAATGGACAGCCTaGCCCAGCACCTTCACGTTGCCCCCGGTGATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSPIRDSEWTA*PSTFTLPPVIR Trigger: CCTGATCACCGGGGGCAACGTGAAGGTGCTGGGCAAGGCTGTCCATTCGCTATCCCGAATCGGGGACGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025740.8 ENSMUST00000237278.2 ENSMUST00000237923.2 |
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| CDS GCA 72 bp | CTGGGGCATGCAGCTGCTGGAAGTCCTCATCCCCAATaGTGGTCTCAGTCACCATGGCTTTGCTGGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGHAAAGSPHPQ*WSQSPWLCWCC Trigger: ACAGCACCAGCAAAGCCATGGTGACTGAGACCAGCATTGGGGATGAGGACTTCCAGCAGCTGCATGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CCA 72 bp | GGGCATGCAGCTGCTGGAAGTCCTCATCCCCAATGCTaGTCTCAGTCACCATGGCTTTGCTGGTGCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GHAAAGSPHPQC*SQSPWLCWCCL Trigger: CAGACAGCACCAGCAAAGCCATGGTGACTGAGACCAGCATTGGGGATGAGGACTTCCAGCAGCTGCATGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CCA 72 bp | GGTTGGGACCCTGCGGGGAGTGTACAGGGGCCAGGATaGAGCCAAAGAACAGTGAACGAAACTTCTTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GWDPAGSVQGPG*SQRTVNETSWV Trigger: CACCCAAGAAGTTTCGTTCACTGTTCTTTGGCTCCATCCTGGCCCCTGTACACTCCCCGCAGGGTCCCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CAA 90 bp | GGCAAATTCGCTGACTCTGCAAAGCTCAGGAGCCCCCGAAATTCCTaGAGGCAGAAGGTGACAGCTATCCCTTCTGGGGCATGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GKFADSAKLRSPRNS*RQKVTAIPSGACSC Trigger: GCAGCTGCATGCCCCAGAAGGGATAGCTGTCACCTTCTGCCTCAAGGAATTTCGGGGGCTCCTGAGCTTTGCAGAGTCAGCGAATTTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025740.8 ENSMUST00000237723.2 |
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| CDS CCA 72 bp | GGAAGTCCTCATCCCCAATGCTGGTCTCAGTCACCATaGCTTTGCTGGTGCTGTCTGCCTCCTCTTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSPHPQCWSQSP*LCWCCLPPLPG Trigger: ACCAGGAAGAGGAGGCAGACAGCACCAGCAAAGCCATGGTGACTGAGACCAGCATTGGGGATGAGGACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CCA 72 bp | AAGGTGACAGCTATCCCTTCTGGGGCATGCAGCTGCTaGAAGTCCTCATCCCCAATGCTGGTCTCAGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: KVTAIPSGACSC*KSSSPMLVSVT Trigger: GGTGACTGAGACCAGCATTGGGGATGAGGACTTCCAGCAGCTGCATGCCCCAGAAGGGATAGCTGTCACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025740.8 ENSMUST00000237723.2 |
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| CDS GCA 72 bp | GGTTTTGGGGAACACGGGCCCTGGGAACATGAGTCTTaGTCTAAGAGTGTGGCCAAGACAAAGTGGGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: GFGEHGPWEHES*SKSVAKTKWAS Trigger: GGATGCCCACTTTGTCTTGGCCACACTCTTAGAGCAAGACTCATGTTCCCAGGGCCCGTGTTCCCCAAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CCA 72 bp | ACGGGCCCTGGGAACATGAGTCTTGCTCTAAGAGTGTaGCCAAGACAAAGTGGGCATCCAGCAAGGAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGPGNMSLALRV*PRQSGHPARNP Trigger: AGGATTCCTTGCTGGATGCCCACTTTGTCTTGGCCACACTCTTAGAGCAAGACTCATGTTCCCAGGGCCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CCA 72 bp | GGAGAGCCTCTGTATAGACATGCAGCCTCAGAAGACTaGGCCCAAGCCGATGTCCGAACAACCCAAGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: GEPLYRHAASED*AQADVRTTQEI Trigger: TATCTCTTGGGTTGTTCGGACATCGGCTTGGGCCCAGTCTTCTGAGGCTGCATGTCTATACAGAGGCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| CDS GCA 72 bp | CAAGCCGATGTCCGAACAACCCAAGAGATAATAAACTaGGCCGGAATATCTGTCCACCATCCCCCGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QADVRTTQEIIN*AGISVHHPPSF Trigger: GAAGGACGGGGGATGGTGGACAGATATTCCGGCGCAGTTTATTATCTCTTGGGTTGTTCGGACATCGGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237278.2 |
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| CDS CCA 72 bp | TGGAAGGCTGTGCCCCGGAGCCCTCATTGCCTCCAGTaGTTTCCATGGCAATCATGTAACAGTCAATGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WKAVPRSPHCLQ*FPWQSCNSQCH Trigger: ATGACATTGACTGTTACATGATTGCCATGGAAACCACTGGAGGCAATGAGGGCTCCGGGGCACAGCCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025740.8 |
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| CDS CCA 72 bp | ATAGTAAAGATGACTGGCCTGCCTGGAACATCGAAGTaGATAGTAAGAGGCAAATTCGCTGACTCTGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IVKMTGLPGTSK*IVRGKFADSAK Trigger: CTTTGCAGAGTCAGCGAATTTGCCTCTTACTATCCACTTCGATGTTCCAGGCAGGCCAGTCATCTTTACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025740.8 ENSMUST00000237723.2 |
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| CDS CCA 72 bp | CAAGGAATCCTCAATAGTAAAGATGACTGGCCTGCCTaGAACATCGAAGTGGATAGTAAGAGGCAAATTCGC | + |
|
Preference number: 6 (lower is better) Translates to: QGILNSKDDWPA*NIEVDSKRQIR Trigger: GCGAATTTGCCTCTTACTATCCACTTCGATGTTCCAGGCAGGCCAGTCATCTTTACTATTGAGGATTCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025740.8 ENSMUST00000237723.2 |
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| CDS CCA 72 bp | CATGAGTCTTGCTCTAAGAGTGTGGCCAAGACAAAGTaGGCATCCAGCAAGGAATCCTCAATAGTAAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: HESCSKSVAKTK*ASSKESSIVKM Trigger: CATCTTTACTATTGAGGATTCCTTGCTGGATGCCCACTTTGTCTTGGCCACACTCTTAGAGCAAGACTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025740.8 ENSMUST00000237723.2 |
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