Pregenerated sensors for RAD54L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028702Ensembl transcript IDs: ENSMUST00000102704.4, ENSMUST00000102705.10
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAACTGAGCAGAGCCTCATaGGGCAGAGAACCCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: ILGKHHAALLDDFLPENKLSRAS*GREPPF Trigger: GAAAGGGGGTTCTCTGCCTCATGAGGCTCTGCTCAG...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTCCGCGCTGCTCCTCATaGGAACGCTGGTGGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: EPPFPVSFPKQLHPDQLIPRCSS*ERWWKT Trigger: CGTCTTCCACCAGCGTTCTCATGAGGAGCAGCGCGG...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTCCCACGCTGCCTGTCTaGCTCACTGGCAGCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: EPPFPVSFPKQLHPDQLIPTLPV*LTGSCI Trigger: GATGCAGCTGCCAGTGAGGCAGACAGGCAGCGTGGG...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTCCCACGCTGCCTGTCTaGCTCACTGGCAGCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: AYQCVPRPQSLSCLYSFLPTLPV*LTGSCI Trigger: GATGCAGCTGCCAGTGAGGCAGACAGGCAGCGTGGG...AAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | CCTCCTGGGCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTGACAGGAAACACTCCTaGACCTGGGTCTCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PPGLTNVFPGLSPFHAFIDRKHS*TWVSLL Trigger: CAGCAGTGAGACCCAGGTCCAGGAGTGTTTCCTGTC...AATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGCCCAGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTAGCTTCAGTTGGTCATaGGCGCTGAGTGGGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: EPPFPVSFPKQLHPDQLISFSWS*ALSGGG Trigger: GCCTCCCCCACTCAGCGCCCATGACCAACTGAAGCT...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCGCTCCTCCCCACGCTaGCTGTCTGCCTCACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTERSSPR*LSASLA Trigger: TGCCAGTGAGGCAGACAGGCAGCGTGGGGAGGAGCG...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTGCACGACTTTGTCACTaGTACGGCTTCGAGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: EPPFPVSFPKQLHPDQLIARLCH*YGFESR Trigger: CCGTGACTCGAAGCCGTAGCAGTGACAAAGTCGTGC...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTCGTCCACCACACAGCTaGTCAGAGCCTTCTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AYQCVPRPQSLSCLYSFLRPPHS*SEPSCG Trigger: GCCACAAGAAGGCTCTGAGCAGCTGTGTGGTGGACG...AAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | GCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTGCCTGTCTGCCTCACTaGCAGCTGCATCTCGACTCT | + |
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Preference number: 4 (lower is better) Translates to: AYQCVPRPQSLSCLYSFLACLPH*QLHLDS Trigger: AGAGTCGAGATGCAGCTGCCAGTGAGGCAGACAGGC...AAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | CCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTTCTGTGCTGTGGTTCCACTaGGCCAGGTCTGAAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PMCSQASVPFMPLFLSFSVLWFH*ARSEVQ Trigger: CTGCACTTCAGACCTGGCTCAGTGGAACCACAGCAC...AGAAAAAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGACCGCGCTGCTCCTCATaGGAACGCTGGTGGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRPRCSS*ERWWKT Trigger: CGTCTTCCACCAGCGTTCTCATGAGGAGCAGCGCGG...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGTGGCGCTCCACATCCTaGTCCTCGTCCACCACACAG | + |
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Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTEWRSTS*SSSTTQ Trigger: CTGTGTGGTGGACGAGGAGCAGGATGTGGAGCGCCA...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTGCCATGATGCAGCCATaGCTTCCAGGAATTCGACGA | + |
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Preference number: 4 (lower is better) Translates to: EPPFPVSFPKQLHPDQLIAMMQP*LPGIRR Trigger: TCGTCGAATTCCTGGAAGCCATGGCTGCATCATGGC...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGACCTTTTCAGGCCCAATaGACGAGAGCCCAGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRPFQAQ*TRAQGT Trigger: GGTCCCCTGGGCTCTCGTGCATTGGGCCTGAAAAGG...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGCCTTTTCAGGCCCAATaGACGAGAGCCCAGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQPFQAQ*TRAQGT Trigger: GGTCCCCTGGGCTCTCGTGCATTGGGCCTGAAAAGG...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | CCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTTCTGCACGACTTTGTCACTaGTACGGCTTCGAGTCACGG | + |
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Preference number: 4 (lower is better) Translates to: PMCSQASVPFMPLFLSFSARLCH*YGFESR Trigger: CCGTGACTCGAAGCCGTAGCAGTGACAAAGTCGTGC...AGAAAAAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCGTCCACCACACAGCTaGTCAGAGCCTTCTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTERPPHS*SEPSCG Trigger: GCCACAAGAAGGCTCTGAGCAGCTGTGTGGTGGACG...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATGGCGCTCCACATCCTaGTCCTCGTCCACCACACAG | + |
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Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRWRSTS*SSSTTQ Trigger: CTGTGTGGTGGACGAGGAGCAGGATGTGGAGCGCCA...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | CCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTTCTTCGAGCCTCCATCGATaGCCAGAGGTTGAATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PMCSQASVPFMPLFLSFSSSLHR*PEVESS Trigger: GGAGGATTCAACCTCTGGCCATCGATGGAGGCTCGA...AGAAAAAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | CCTCCTGGGCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTAGAGTTATAACCAGGTaGGAAGATACCCAAAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PPGLTNVFPGLSPFHAFIRVITR*EDTQSA Trigger: GGCACTTTGGGTATCTTCCCACCTGGTTATAACTCT...AATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGCCCAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | CCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTTCTAGAACCATCAGGGGGTaGCCAGACCTGACGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PMCSQASVPFMPLFLSFSRTIRG*PDLTVV Trigger: AACAACCGTCAGGTCTGGCCACCCCCTGATGGTTCT...AGAAAAAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGGCATCCCAGGCAGCCTaGAGTACCTCATCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQASQAA*STSSWS Trigger: GCTCCAGGATGAGGTACTCCAGGCTGCCTGGGATGC...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAGCATCCCAGGCAGCCTaGAGTACCTCATCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRASQAA*STSSWS Trigger: GCTCCAGGATGAGGTACTCCAGGCTGCCTGGGATGC...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAGTTGGTCATGGGCGCTaGGTGGGGGAGGCTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKVGHGR*VGEAHR Trigger: TCTATGAGCCTCCCCCACTCAGCGCCCATGACCAAC...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGTCGATGGCCAGAGGTTaGATCCTCCCTCCAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTESMARG*ILPPSH Trigger: ATGGCTTGGAGGGAGGATTCAACCTCTGGCCATCGA...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTTTGTGGCTCTGCCGCTaGAAGATCTTCTCCTCAATT | + |
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Preference number: 4 (lower is better) Translates to: EPPFPVSFPKQLHPDQLILWLCR*KIFSSI Trigger: AATTGAGGAGAAGATCTTTCAGCGGCAGAGCCACAA...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAGTGCTGTGGTTCCACTaGGCCAGGTCTGAAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRVLWFH*ARSEVQ Trigger: CTGCACTTCAGACCTGGCTCAGTGGAACCACAGCAC...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTCTACAACAAACCACCTaGTCAATCTTCACGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EPPFPVSFPKQLHPDQLILQQTT*SIFTGR Trigger: TCTGCCCGTGAAGATTGAGCAGGTGGTTTGTTGTAG...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | CCTCCTGGGCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTAAGACACACTCATCTTaGCCTCACGCAATTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PPGLTNVFPGLSPFHAFIKTHSS*PHAILL Trigger: AAGAAGAATTGCGTGAGGGCAAGATGAGTGTGTCTT...AATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGCCCAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGGACAGGAAACACTCCTaGACCTGGGTCTCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTEDRKHS*TWVSLL Trigger: CAGCAGTGAGACCCAGGTCCAGGAGTGTTTCCTGTC...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | CCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTTCTGCCATGATGCAGCCATaGCTTCCAGGAATTCGACGA | + |
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Preference number: 4 (lower is better) Translates to: PMCSQASVPFMPLFLSFSAMMQP*LPGIRR Trigger: TCGTCGAATTCCTGGAAGCCATGGCTGCATCATGGC...AGAAAAAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTTCCAGCAAATCATTTTaGATGGGGGTCCCGGAGATT | + |
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Preference number: 4 (lower is better) Translates to: EPPFPVSFPKQLHPDQLISSKSF*MGVPEI Trigger: AATCTCCGGGACCCCCATCCAAAATGATTTGCTGGA...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAGCCTGTCTGCCTCACTaGCAGCTGCATCTCGACTCT | + |
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Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRACLPH*QLHLDS Trigger: AGAGTCGAGATGCAGCTGCCAGTGAGGCAGACAGGC...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGACCATCTCATCAGCCATaGTGCAGCCATGGCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRPSHQP*CSHGFQ Trigger: CTGGAAGCCATGGCTGCATCATGGCTGATGAGATGG...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATCGATGGCCAGAGGTTaGATCCTCCCTCCAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRSMARG*ILPPSH Trigger: ATGGCTTGGAGGGAGGATTCAACCTCTGGCCATCGA...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | CCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTTCTCTCCACGCTGGTTCATaGATCCTTCCAGTTTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: PMCSQASVPFMPLFLSFSLHAGS*ILPVFG Trigger: ACCGAAAACTGGAAGGATTCATGAACCAGCGTGGAG...AGAAAAAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTTTGTATAGCTCAGTTTaGAGGGGTGTCAGCCTACAA | + |
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Preference number: 4 (lower is better) Translates to: EPPFPVSFPKQLHPDQLILYSSV*RGVSLQ Trigger: TTGTAGGCTGACACCCCTTCAAACTGAGCTATACAA...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGCCACTGAGCCAGGTCTaGAGTGCAGTCAGAACCATC | + |
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Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQPLSQV*SAVRTI Trigger: GATGGTTCTGACTGCACTTCAGACCTGGCTCAGTGG...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGATCAATGTGATGCACTaGAGTGTCTTCCCCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTEINVMH*SVFPRP Trigger: GGGCCTGGGGAAGACACTGCAGTGCATCACATTGAT...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGGAGCCAGGTCTGAAGTaGAGTCAGAACCATCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQEPGLK*SQNHQG Trigger: CCCCTGATGGTTCTGACTGCACTTCAGACCTGGCTC...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | GCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTGCATTCTGGGCTCTaGCGTAAAAGTGTCCACATC | + |
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Preference number: 4 (lower is better) Translates to: AYQCVPRPQSLSCLYSFLLHSGL*RKSVHI Trigger: GATGTGGACACTTTTACGCCAGAGCCCAGAATGCAA...AAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATCGAGCCTCCATCGATaGCCAGAGGTTGAATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRSSLHR*PEVESS Trigger: GGAGGATTCAACCTCTGGCCATCGATGGAGGCTCGA...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATTAGCACCCGCCGGCTaGTATTCAAGCTGTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRLAPAG*YSSCPE Trigger: CTCTGGACAGCTTGAATACCAGCCGGCGGGTGCTAA...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | GCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTCCAGCAAATCATTTTaGATGGGGGTCCCGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: AYQCVPRPQSLSCLYSFLSSKSF*MGVPEI Trigger: AATCTCCGGGACCCCCATCCAAAATGATTTGCTGGA...AAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAGAACCATCAGGGGGTaGCCAGACCTGACGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQRTIRG*PDLTVV Trigger: AACAACCGTCAGGTCTGGCCACCCCCTGATGGTTCT...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | GCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTGGGATGGGGACCTTaGAAGGCTTTGACAAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: AYQCVPRPQSLSCLYSFLLGWGP*KALTKY Trigger: GTATTTTGTCAAAGCCTTTCAAGGTCCCCATCCCAA...AAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGGGCCCTCGTCACATATaGCCAGTCCAACATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTEGPRHI*PVQHFL Trigger: AAGGAAATGTTGGACTGGTCATATGTGACGAGGGCC...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAACCACTGAGCCAGGTCTaGAGTGCAGTCAGAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKPLSQV*SAVRTI Trigger: GATGGTTCTGACTGCACTTCAGACCTGGCTCAGTGG...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGTCTCGATTTCTGGCTTaGATTCTGGGCTCTGGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTESRFLA*ILGSGV Trigger: TACGCCAGAGCCCAGAATGCAAGCCAGAAATCGAGA...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTAAGACACACTCATCTTaGCCTCACGCAATTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EPPFPVSFPKQLHPDQLIKTHSS*PHAILL Trigger: AAGAAGAATTGCGTGAGGGCAAGATGAGTGTGTCTT...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAGAGCCAGGTCTGAAGTaGAGTCAGAACCATCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKEPGLK*SQNHQG Trigger: CCCCTGATGGTTCTGACTGCACTTCAGACCTGGCTC...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR GCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAGCCCTCGTTTATCTGTaGTGTGGTTCCACTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRALVYL*CGSTEP Trigger: TGGCTCAGTGGAACCACAGCACAGATAAACGAGGGC...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGTCACCAAGAGAAAAGTaGCGCTCCACATCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQSPREK*RSTSCS Trigger: GGAGCAGGATGTGGAGCGCCACTTTTCTCTTGGTGA...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATCACCAAGAGAAAAGTaGCGCTCCACATCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRSPREK*RSTSCS Trigger: GGAGCAGGATGTGGAGCGCCACTTTTCTCTTGGTGA...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGGGATCAACAACCACGTaGACAGGGAGTTTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTEGSTTT*TGSFSL Trigger: CAAGGAAAAACTCCCTGTTCACGTGGTTGTTGATCC...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR TCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGACTCCACGCTGGTTCATaGATCCTTCCAGTTTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRLHAGS*ILPVFG Trigger: ACCGAAAACTGGAAGGATTCATGAACCAGCGTGGAG...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGGGCCCTCGTCACATATaGCCAGTCCAACATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQGPRHI*PVQHFL Trigger: AAGGAAATGTTGGACTGGTCATATGTGACGAGGGCC...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGTGTCATGTGTGTCACTaGGGCTTGCTTCATCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQCHVCH*GLLHPE Trigger: CTCTGGATGAAGCAAGCCTCAGTGACACACATGACA...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR GCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAGCCCTCGTTTATCTGTaGTGTGGTTCCACTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKALVYL*CGSTEP Trigger: TGGCTCAGTGGAACCACAGCACAGATAAACGAGGGC...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGGGGACCTTGATAATTTaGGATGGGGACCTTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTEGTLII*DGDLER Trigger: CCTTTCAAGGTCCCCATCCCAAATTATCAAGGTCCC...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGACTCTAGCTCCACGCTaGTTCATGAATCCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTETLAPR*FMNPSS Trigger: ACTGGAAGGATTCATGAACCAGCGTGGAGCTAGAGT...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATGGAGTACCTCATCCTaGAGCCCTCGTTTATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRWSTSS*SPRLSV Trigger: CACAGATAAACGAGGGCTCCAGGATGAGGTACTCCA...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGTTGGGATGGGGACCTTaGAAGGCTTTGACAAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTELGWGP*KALTKY Trigger: GTATTTTGTCAAAGCCTTTCAAGGTCCCCATCCCAA...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAATGTCATGTGTGTCACTaGGGCTTGCTTCATCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKCHVCH*GLLHPE Trigger: CTCTGGATGAAGCAAGCCTCAGTGACACACATGACA...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAATGCTTCATGTTGACTaGTATCCAGACAAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRMLHVD*YPDKVA Trigger: GGCCACCTTGTCTGGATAGCAGTCAACATGAAGCAT...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATGCTTCATGTTGACTaGTATCCAGACAAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQMLHVD*YPDKVA Trigger: GGCCACCTTGTCTGGATAGCAGTCAACATGAAGCAT...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAATCTCGATTTCTGGCTTaGATTCTGGGCTCTGGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKSRFLA*ILGSGV Trigger: TACGCCAGAGCCCAGAATGCAAGCCAGAAATCGAGA...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGAAAGCCATCCTCCTCTaGCACACACTTGTCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTEKAILL*HTLVID Trigger: ATCTATGACAAGTGTGTGGCAGAGGAGGATGGCTTT...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGGGGACCTTGATAATTTaGGATGGGGACCTTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQGTLII*DGDLER Trigger: CCTTTCAAGGTCCCCATCCCAAATTATCAAGGTCCC...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGTTGCATTCTGGGCTCTaGCGTAAAAGTGTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQLHSGL*RKSVHI Trigger: GATGTGGACACTTTTACGCCAGAGCCCAGAATGCAA...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAATGGAGTACCTCATCCTaGAGCCCTCGTTTATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKWSTSS*SPRLSV Trigger: CACAGATAAACGAGGGCTCCAGGATGAGGTACTCCA...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAGGATCAACAACCACGTaGACAGGGAGTTTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKGSTTT*TGSFSL Trigger: CAAGGAAAAACTCCCTGTTCACGTGGTTGTTGATCC...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR TCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAATTGTGGCTCTGCCGCTaGAAGATCTTCTCCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKLWLCR*KIFSSI Trigger: AATTGAGGAGAAGATCTTTCAGCGGCAGAGCCACAA...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAACTACAACAAACCACCTaGTCAATCTTCACGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKLQQTT*SIFTGR Trigger: TCTGCCCGTGAAGATTGAGCAGGTGGTTTGTTGTAG...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR GCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATGTGTCACTGAGGCTTaGTTCATCCAGAGTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRCVTEA*FIQSKQ Trigger: CTGTTTACTCTGGATGAAGCAAGCCTCAGTGACACA...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTCTAGCTCCACGCTaGTTCATGAATCCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKTLAPR*FMNPSS Trigger: ACTGGAAGGATTCATGAACCAGCGTGGAGCTAGAGT...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAAGAGTTATAACCAGGTaGGAAGATACCCAAAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRRVITR*EDTQSA Trigger: GGCACTTTGGGTATCTTCCCACCTGGTTATAACTCT...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR TCA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGATAAATGCTTCATGTTaGCTGCTATCCAGACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GKHHAALLDDFLPENKTEINASC*LLSRQG Trigger: ACCTTGTCTGGATAGCAGTCAACATGAAGCATTTAT...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR GCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAATGTGTCACTGAGGCTTaGTTCATCCAGAGTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKCVTEA*FIQSKQ Trigger: CTGTTTACTCTGGATGAAGCAAGCCTCAGTGACACA...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR TCA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAATAAATGCTTCATGTTaGCTGCTATCCAGACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGKHHAALLDDFLPENKINASC*LLSRQG Trigger: ACCTTGTCTGGATAGCAGTCAACATGAAGCATTTAT...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR GCA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATTGGCAACTCAAAATaGTTCTTGAATTCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KHHAALLDDFLPENKTEQIGNSK*FLNSWA Trigger: TGCCCATGAATTCAAGAAGCATTTTGAGTTGCCAAT...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR GCA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAATTGGCAACTCAAAATaGTTCTTGAATTCATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRIGNSK*FLNSWA Trigger: TGCCCATGAATTCAAGAAGCATTTTGAGTTGCCAAT...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS TCA 90 bp | CTGGAGCCCTCGTTTATCTGTGCTGTGGTTCCACTGAGCCAGGTCTaGAGTGCAGTCAGAACCATCAGGGGGTGGCCAGACCTGACGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LEPSFICAVVPLSQV*SAVRTIRGWPDLTV Trigger: AACCGTCAGGTCTGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGCTCAGTGGAACCACAGCACAGATAAACGAGGGCTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS GCA 90 bp | CTGTTCACAATACCGATGAGCTCCCGCAGACGCTCCTCCCCACGCTaGCTGTCTGCCTCACTGGCAGCTGCATCTCGACTCTTCAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: LFTIPMSSRRRSSPR*LSASLAAASRLFKI Trigger: AATTTTGAAGAGTCGAGATGCAGCTGCCAGTGAGGCAGACAGGCAGCGTGGGGAGGAGCGTCTGCGGGAGCTCATCGGTATTGTGAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS GCA 90 bp | CCCAGGCAGCCTGGAGTACCTCATCCTGGAGCCCTCGTTTATCTGTaGTGTGGTTCCACTGAGCCAGGTCTGAAGTGCAGTCAGAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRQPGVPHPGALVYL*CGSTEPGLKCSQNH Trigger: ATGGTTCTGACTGCACTTCAGACCTGGCTCAGTGGAACCACAGCACAGATAAACGAGGGCTCCAGGATGAGGTACTCCAGGCTGCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS TCA 90 bp | GCCAGGTCTGAAGTGCAGTCAGAACCATCAGGGGGTGGCCAGACCTaGCGGTTGTTTACACAACGGCGGCAATGCAATCTGTCATGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARSEVQSEPSGGGQT*RLFTQRRQCNLSCV Trigger: CACACATGACAGATTGCATTGCCGCCGTTGTGTAAACAACCGTCAGGTCTGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS GCA 90 bp | GCCCTCGTTTATCTGTGCTGTGGTTCCACTGAGCCAGGTCTGAAGTaGAGTCAGAACCATCAGGGGGTGGCCAGACCTGACGGTTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ALVYLCCGSTEPGLK*SQNHQGVARPDGCL Trigger: TAAACAACCGTCAGGTCTGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGCTCAGTGGAACCACAGCACAGATAAACGAGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS CCA 90 bp | AGGGAGTTTTTCCTTGTCAAGCTTCAGTTGGTCATGGGCGCTGAGTaGGGGAGGCTCATAGAGAACCAAGGCACCTTCTTCCAGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: REFFLVKLQLVMGAE*GRLIENQGTFFQRV Trigger: GACCCTCTGGAAGAAGGTGCCTTGGTTCTCTATGAGCCTCCCCCACTCAGCGCCCATGACCAACTGAAGCTTGACAAGGAAAAACTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS CCA 90 bp | GCAAATCATTTTGGATGGGGGTCCCGGAGATTAGCACCCGCCGGCTaGTATTCAAGCTGTCCAGAGCCTGGTAAGTCTGATTCTCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ANHFGWGSRRLAPAG*YSSCPEPGKSDSQS Trigger: ACTCTGAGAATCAGACTTACCAGGCTCTGGACAGCTTGAATACCAGCCGGCGGGTGCTAATCTCCGGGACCCCCATCCAAAATGATTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CCA 90 bp | GCTTCATCCAGAGTAAACAGCTCTTTAAGCTCACCAAGAGAAAAGTaGCGCTCCACATCCTGCTCCTCGTCCACCACACAGCTGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASSRVNSSLSSPREK*RSTSCSSSTTQLLR Trigger: TCTGAGCAGCTGTGTGGTGGACGAGGAGCAGGATGTGGAGCGCCACTTTTCTCTTGGTGAGCTTAAAGAGCTGTTTACTCTGGATGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS TCA 90 bp | TTTCGGTCTATCTCGTCCTTCGAGCCTCCATCGATGGCCAGAGGTTaGATCCTCCCTCCAAGCCATTTCTCAACCTCATTGTACCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FRSISSFEPPSMARG*ILPPSHFSTSLYQF Trigger: GAACTGGTACAATGAGGTTGAGAAATGGCTTGGAGGGAGGATTCAACCTCTGGCCATCGATGGAGGCTCGAAGGACGAGATAGACCGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CCA 90 bp | ATCCTTCCAGTTTTCGGTCTATCTCGTCCTTCGAGCCTCCATCGATaGCCAGAGGTTGAATCCTCCCTCCAAGCCATTTCTCAACCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ILPVFGLSRPSSLHR*PEVESSLQAISQPH Trigger: ATGAGGTTGAGAAATGGCTTGGAGGGAGGATTCAACCTCTGGCCATCGATGGAGGCTCGAAGGACGAGATAGACCGAAAACTGGAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | GCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTGACACCAGCACGACTTaGTCACTGCTACGGCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: AYQCVPRPQSLSCLYSFLDTSTT*SLLRLR Trigger: TCGAAGCCGTAGCAGTGACAAAGTCGTGCTGGTGTC...AAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
||
| CDS CCA 90 bp | GAATTTACAAAGTGCACCAAGCTGAAATACTCCAGCAAATCATTTTaGATGGGGGTCCCGGAGATTAGCACCCGCCGGCTGGTATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EFTKCTKLKYSSKSF*MGVPEISTRRLVFK Trigger: CTTGAATACCAGCCGGCGGGTGCTAATCTCCGGGACCCCCATCCAAAATGATTTGCTGGAGTATTTCAGCTTGGTGCACTTTGTAAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | CCTCCTGGGCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTAGATCTTCTCCTCAATaGTTCCTGCAGATAGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PPGLTNVFPGLSPFHAFIRSSPQ*FLQIAV Trigger: GACTGCTATCTGCAGGAACAATTGAGGAGAAGATCT...AATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGCCCAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
||
| CDS TCA 90 bp | GCTTCGAGTCACGGCCAGAATGTAATCAAGGACCAGCATCTTACCTaGCAACTGTGGCTCTACAGCTTTAGAGTTATAACCAGGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASSHGQNVIKDQHLT*QLWLYSFRVITRWE Trigger: TTCCCACCTGGTTATAACTCTAAAGCTGTAGAGCCACAGTTGTCAGGTAAGATGCTGGTCCTTGATTACATTCTGGCCGTGACTCGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGATCGATGGCCAGAGGTaGAATCCTCCCTCCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GKHHAALLDDFLPENKTEIDGQR*NPPSKP Trigger: TGGCTTGGAGGGAGGATTCAACCTCTGGCCATCGAT...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGGACACCAGCACGACTTaGTCACTGCTACGGCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GKHHAALLDDFLPENKTEDTSTT*SLLRLR Trigger: TCGAAGCCGTAGCAGTGACAAAGTCGTGCTGGTGTC...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | CCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTTCTAAGCGCTCCACAACCTaGGCTCGCTTCTTAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PMCSQASVPFMPLFLSFSKRSTT*ARFLMD Trigger: GTCCATTAAGAAGCGAGCCAAGGTTGTGGAGCGCTT...AGAAAAAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | GCTTACCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTGACTCGGGCCATAGCTaGTTCATCATTGGCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: AYQCVPRPQSLSCLYSFLDSGHS*FIIGWI Trigger: AATCCAGCCAATGATGAACAAGCTATGGCCCGAGTC...AAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGGTAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAATCGATGGCCAGAGGTaGAATCCTCCCTCCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRIDGQR*NPPSKP Trigger: TGGCTTGGAGGGAGGATTCAACCTCTGGCCATCGAT...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTAGATCTTCTCCTCAATaGTTCCTGCAGATAGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EPPFPVSFPKQLHPDQLIRSSPQ*FLQIAV Trigger: GACTGCTATCTGCAGGAACAATTGAGGAGAAGATCT...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS GCA 90 bp | TACACAACGGCGGCAATGCAATCTGTCATGTGTGTCACTGAGGCTTaGTTCATCCAGAGTAAACAGCTCTTTAAGCTCACCAAGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YTTAAMQSVMCVTEA*FIQSKQLFKLTKRK Trigger: TTTTCTCTTGGTGAGCTTAAAGAGCTGTTTACTCTGGATGAAGCAAGCCTCAGTGACACACATGACAGATTGCATTGCCGCCGTTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | CCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTTCTGTCTCACTGCTGGACTaGCGTTTCTTAGGAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: PMCSQASVPFMPLFLSFSVSLLD*RFLGVT Trigger: AGTAACTCCTAAGAAACGCAAGTCCAGCAGTGAGAC...AGAAAAAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CAA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATTCTCGATTTCTGGCTaGCATTCTGGGCTCTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRFSISG*HSGLWR Trigger: ACGCCAGAGCCCAGAATGCAAGCCAGAAATCGAGAA...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | GAACCCCCTTTCCCTGTATCCTTTCCCAAACAACTACATCCAGACCAGCTGATTAACTCAAAATGCTTCTaGAATTCATGGGCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EPPFPVSFPKQLHPDQLINSKCF*NSWAVP Trigger: GGGAACTGCCCATGAATTCAAGAAGCATTTTGAGTT...AATCAGCTGGTCTGGATGTAGTTGTTTGGGAAAGGATACAGGGAAAGGGGGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CAA 90 bp | CCAATGTGTTCCCAGGCCTCAGTCCCTTTCATGCCTTTATTCCTTTCTTTTTCTGAAGACACACTCATCTaGCCCTCACGCAATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PMCSQASVPFMPLFLSFSEDTLI*PSRNSS Trigger: AGAAGAATTGCGTGAGGGCAAGATGAGTGTGTCTTC...AGAAAAAGAAAGGAATAAAGGCATGAAAGGGACTGAGGCCTGGGAACACATTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102705.10 |
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| CDS-3UTR CAA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGGTCTCACTGCTGGACTaGCGTTTCTTAGGAGTTACT | + |
|
Preference number: 5 (lower is better) Translates to: GKHHAALLDDFLPENKTEVSLLD*RFLGVT Trigger: AGTAACTCCTAAGAAACGCAAGTCCAGCAGTGAGAC...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CAA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAAAGCGCTCCACAACCTaGGCTCGCTTCTTAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILGKHHAALLDDFLPENKKRSTT*ARFLMD Trigger: GTCCATTAAGAAGCGAGCCAAGGTTGTGGAGCGCTT...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAGACTCGGGCCATAGCTaGTTCATCATTGGCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRDSGHS*FIIGWI Trigger: AATCCAGCCAATGATGAACAAGCTATGGCCCGAGTC...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CAA 90 bp | GGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCATTTCTCAACCTCATaGTACCAGTTCTTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GKHHAALLDDFLPENKTEHFSTS*YQFFTR Trigger: CCTGGTGAAGAACTGGTACAATGAGGTTGAGAAATG...CTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CAA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGCATTTCTCAACCTCATaGTACCAGTTCTTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KHHAALLDDFLPENKTEQHFSTS*YQFFTR Trigger: CCTGGTGAAGAACTGGTACAATGAGGTTGAGAAATG...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CAA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAGAAGACACACTCATCTaGCCCTCACGCAATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILGKHHAALLDDFLPENKEDTLI*PSRNSS Trigger: AGAAGAATTGCGTGAGGGCAAGATGAGTGTGTCTTC...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATAGCTTGTTCATCATaGGCTGGATTCCAGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KHHAALLDDFLPENKTEQIACSS*AGFQSG Trigger: TCCTGACTGGAATCCAGCCAATGATGAACAAGCTAT...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS-3UTR CAA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGAATAGCTTGTTCATCATaGGCTGGATTCCAGTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRIACSS*AGFQSG Trigger: TCCTGACTGGAATCCAGCCAATGATGAACAAGCTAT...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CAA 90 bp | AACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGATTTGGGATGGGGACCTaGAAAGGCTTTGACAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: NIMQPFLMIFSQRIKLSRFGMGT*KGFDKI Trigger: TATTTTGTCAAAGCCTTTCAAGGTCCCCATCCCAAA...TCTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CAA 90 bp | AAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAACTGAGCAGTTTGGGATGGGGACCTaGAAAGGCTTTGACAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: KHHAALLDDFLPENKTEQFGMGT*KGFDKI Trigger: TATTTTGTCAAAGCCTTTCAAGGTCCCCATCCCAAA...CTGCTCAGTTTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS-3UTR CAA 90 bp | ATTTTGGGCAAACATCATGCAGCCCTTCTTGATGATTTTCTCCCAGAGAATAAAAACTCAAAATGCTTCTaGAATTCATGGGCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ILGKHHAALLDDFLPENKNSKCF*NSWAVP Trigger: GGGAACTGCCCATGAATTCAAGAAGCATTTTGAGTT...TTTATTCTCTGGGAGAAAATCATCAAGAAGGGCTGCATGATGTTTGCCCAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS GCA 72 bp | ATACCGATGAGCTCCCGCAGACGCTCCTCCCCACGCTaGCTGTCTGCCTCACTGGCAGCTGCATCTCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: IPMSSRRRSSPR*LSASLAAASRL Trigger: GAGTCGAGATGCAGCTGCCAGTGAGGCAGACAGGCAGCGTGGGGAGGAGCGTCTGCGGGAGCTCATCGGTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS GCA 72 bp | GGCGCTCCACATCCTGCTCCTCGTCCACCACACAGCTaGTCAGAGCCTTCTTGTGGCTCTGCCGCTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GAPHPAPRPPHS*SEPSCGSAAER Trigger: TCTTTCAGCGGCAGAGCCACAAGAAGGCTCTGAGCAGCTGTGTGGTGGACGAGGAGCAGGATGTGGAGCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS GCA 72 bp | TATCTGTGCTGTGGTTCCACTGAGCCAGGTCTGAAGTaGAGTCAGAACCATCAGGGGGTGGCCAGACCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: YLCCGSTEPGLK*SQNHQGVARPD Trigger: GTCAGGTCTGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGCTCAGTGGAACCACAGCACAGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS CCA 72 bp | TTTGGATGGGGGTCCCGGAGATTAGCACCCGCCGGCTaGTATTCAAGCTGTCCAGAGCCTGGTAAGTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: FGWGSRRLAPAG*YSSCPEPGKSD Trigger: ATCAGACTTACCAGGCTCTGGACAGCTTGAATACCAGCCGGCGGGTGCTAATCTCCGGGACCCCCATCCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS TCA 72 bp | GAAGTGCAGTCAGAACCATCAGGGGGTGGCCAGACCTaGCGGTTGTTTACACAACGGCGGCAATGCAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: EVQSEPSGGGQT*RLFTQRRQCNL Trigger: CAGATTGCATTGCCGCCGTTGTGTAAACAACCGTCAGGTCTGGCCACCCCCTGATGGTTCTGACTGCACTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS TCA 72 bp | TCGTTTATCTGTGCTGTGGTTCCACTGAGCCAGGTCTaGAGTGCAGTCAGAACCATCAGGGGGTGGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SFICAVVPLSQV*SAVRTIRGWPD Trigger: GTCTGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGCTCAGTGGAACCACAGCACAGATAAACGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS TCA 72 bp | TCCTGGAGCCCTCGTTTATCTGTGCTGTGGTTCCACTaGGCCAGGTCTGAAGTGCAGTCAGAACCATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SWSPRLSVLWFH*ARSEVQSEPSG Trigger: CCCTGATGGTTCTGACTGCACTTCAGACCTGGCTCAGTGGAACCACAGCACAGATAAACGAGGGCTCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS GCA 72 bp | AAGGGCACGACGAACTCCAGCCCTTTTCAGGCCCAATaGACGAGAGCCCAGGGGACCTTGATAATTTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: KGTTNSSPFQAQ*TRAQGTLIIWD Trigger: ATCCCAAATTATCAAGGTCCCCTGGGCTCTCGTGCATTGGGCCTGAAAAGGGCTGGAGTTCGTCGTGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS GCA 72 bp | CCTGGAGTACCTCATCCTGGAGCCCTCGTTTATCTGTaGTGTGGTTCCACTGAGCCAGGTCTGAAGTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PGVPHPGALVYL*CGSTEPGLKCS Trigger: ACTGCACTTCAGACCTGGCTCAGTGGAACCACAGCACAGATAAACGAGGGCTCCAGGATGAGGTACTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS CAA 72 bp | TCAGGGCTCGATGGGCTATTGAAGCGCTCCACAACCTaGGCTCGCTTCTTAATGGACATCGTGCCATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGLDGLLKRSTT*ARFLMDIVPSR Trigger: CCTGGATGGCACGATGTCCATTAAGAAGCGAGCCAAGGTTGTGGAGCGCTTCAATAGCCCATCGAGCCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS CCA 72 bp | TTCCTTGTCAAGCTTCAGTTGGTCATGGGCGCTGAGTaGGGGAGGCTCATAGAGAACCAAGGCACCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLVKLQLVMGAE*GRLIENQGTFF Trigger: GAAGAAGGTGCCTTGGTTCTCTATGAGCCTCCCCCACTCAGCGCCCATGACCAACTGAAGCTTGACAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS CCA 72 bp | AAGTGCACCAAGCTGAAATACTCCAGCAAATCATTTTaGATGGGGGTCCCGGAGATTAGCACCCGCCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KCTKLKYSSKSF*MGVPEISTRRL Trigger: CAGCCGGCGGGTGCTAATCTCCGGGACCCCCATCCAAAATGATTTGCTGGAGTATTTCAGCTTGGTGCACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
||
| CDS CAA 72 bp | CACGTGAACAGGGAGTTTTTCCTTGTCAAGCTTCAGTaGGTCATGGGCGCTGAGTGGGGGAGGCTCATAGAG | + |
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Preference number: 6 (lower is better) Translates to: HVNREFFLVKLQ*VMGAEWGRLIE Trigger: CTCTATGAGCCTCCCCCACTCAGCGCCCATGACCAACTGAAGCTTGACAAGGAAAAACTCCCTGTTCACGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS TCA 72 bp | ATCTCGTCCTTCGAGCCTCCATCGATGGCCAGAGGTTaGATCCTCCCTCCAAGCCATTTCTCAACCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: ISSFEPPSMARG*ILPPSHFSTSL Trigger: CAATGAGGTTGAGAAATGGCTTGGAGGGAGGATTCAACCTCTGGCCATCGATGGAGGCTCGAAGGACGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CCA 72 bp | GTCAAGGGCTTCCGAAAAGGAGACAGGAAACACTCCTaGACCTGGGTCTCACTGCTGGACTTGCGTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: VKGFRKGDRKHS*TWVSLLDLRFL Trigger: TAAGAAACGCAAGTCCAGCAGTGAGACCCAGGTCCAGGAGTGTTTCCTGTCTCCTTTTCGGAAGCCCTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CCA 72 bp | GTTTTCGGTCTATCTCGTCCTTCGAGCCTCCATCGATaGCCAGAGGTTGAATCCTCCCTCCAAGCCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: VFGLSRPSSLHR*PEVESSLQAIS Trigger: AGAAATGGCTTGGAGGGAGGATTCAACCTCTGGCCATCGATGGAGGCTCGAAGGACGAGATAGACCGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CAA 90 bp | ACCAGGCTAGAAGGTGACACCACCACTGCCTTCTCGATTTCTGGCTaGCATTCTGGGCTCTGGCGTAAAAGTGTCCACATCAATGTGATG | + |
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Preference number: 6 (lower is better) Translates to: TRLEGDTTTAFSISG*HSGLWRKSVHINVM Trigger: CATCACATTGATGTGGACACTTTTACGCCAGAGCCCAGAATGCAAGCCAGAAATCGAGAAGGCAGTGGTGGTGTCACCTTCTAGCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS TCA 72 bp | CTTCATGTTGACTGCTATCCAGACAAGGTGGCCGGTTaGGTAGCTGAGTCAAGGGCTTCCGAAAAGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: LHVDCYPDKVAG*VAESRASEKET Trigger: TGTCTCCTTTTCGGAAGCCCTTGACTCAGCTACTCAACCGGCCACCTTGTCTGGATAGCAGTCAACATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS TCA 72 bp | ACACAGCTGCTCAGAGCCTTCTTGTGGCTCTGCCGCTaGAAGATCTTCTCCTCAATTGTTCCTGCAGATAGC | + |
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Preference number: 6 (lower is better) Translates to: TQLLRAFLWLCR*KIFSSIVPADS Trigger: GCTATCTGCAGGAACAATTGAGGAGAAGATCTTTCAGCGGCAGAGCCACAAGAAGGCTCTGAGCAGCTGTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS GCA 72 bp | AAGGTGACACCACCACTGCCTTCTCGATTTCTGGCTTaGATTCTGGGCTCTGGCGTAAAAGTGTCCACATCA | + |
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Preference number: 6 (lower is better) Translates to: KVTPPLPSRFLA*ILGSGVKVSTS Trigger: TGATGTGGACACTTTTACGCCAGAGCCCAGAATGCAAGCCAGAAATCGAGAAGGCAGTGGTGGTGTCACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CCA 72 bp | ATGATGAGGATGGGGGAAGGCACTCTAGCTCCACGCTaGTTCATGAATCCTTCCAGTTTTCGGTCTATCTCG | + |
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Preference number: 6 (lower is better) Translates to: MMRMGEGTLAPR*FMNPSSFRSIS Trigger: CGAGATAGACCGAAAACTGGAAGGATTCATGAACCAGCGTGGAGCTAGAGTGCCTTCCCCCATCCTCATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CCA 72 bp | AGAGTAAACAGCTCTTTAAGCTCACCAAGAGAAAAGTaGCGCTCCACATCCTGCTCCTCGTCCACCACACAG | + |
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Preference number: 6 (lower is better) Translates to: RVNSSLSSPREK*RSTSCSSSTTQ Trigger: CTGTGTGGTGGACGAGGAGCAGGATGTGGAGCGCCACTTTTCTCTTGGTGAGCTTAAAGAGCTGTTTACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CAA 72 bp | TATCTCGTCCTTCGAGCCTCCATCGATGGCCAGAGGTaGAATCCTCCCTCCAAGCCATTTCTCAACCTCATT | + |
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Preference number: 6 (lower is better) Translates to: YLVLRASIDGQR*NPPSKPFLNLI Trigger: AATGAGGTTGAGAAATGGCTTGGAGGGAGGATTCAACCTCTGGCCATCGATGGAGGCTCGAAGGACGAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CAA 90 bp | TTTTCGGTCTATCTCGTCCTTCGAGCCTCCATCGATGGCCAGAGGTaGAATCCTCCCTCCAAGCCATTTCTCAACCTCATTGTACCAGTT | + |
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Preference number: 6 (lower is better) Translates to: FSVYLVLRASIDGQR*NPPSKPFLNLIVPV Trigger: AACTGGTACAATGAGGTTGAGAAATGGCTTGGAGGGAGGATTCAACCTCTGGCCATCGATGGAGGCTCGAAGGACGAGATAGACCGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CAA 90 bp | AAAACAAAATCAGGGCTCGATGGGCTATTGAAGCGCTCCACAACCTaGGCTCGCTTCTTAATGGACATCGTGCCATCCAGGCGAACATAC | + |
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Preference number: 6 (lower is better) Translates to: KTKSGLDGLLKRSTT*ARFLMDIVPSRRTY Trigger: GTATGTTCGCCTGGATGGCACGATGTCCATTAAGAAGCGAGCCAAGGTTGTGGAGCGCTTCAATAGCCCATCGAGCCCTGATTTTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CCA 72 bp | ACTGCCTTCTCGATTTCTGGCTTGCATTCTGGGCTCTaGCGTAAAAGTGTCCACATCAATGTGATGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: TAFSISGLHSGL*RKSVHINVMHC Trigger: GCAGTGCATCACATTGATGTGGACACTTTTACGCCAGAGCCCAGAATGCAAGCCAGAAATCGAGAAGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CCA 72 bp | CAACTGTGGCTCTACAGCTTTAGAGTTATAACCAGGTaGGAAGATACCCAAAGTGCCCTCAAAGCCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: QLWLYSFRVITR*EDTQSALKAIL Trigger: GAGGATGGCTTTGAGGGCACTTTGGGTATCTTCCCACCTGGTTATAACTCTAAAGCTGTAGAGCCACAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS CAA 90 bp | AGCTTCTTTAGAGAGGTGATAGAAGACAGGGAAGACACACTCATCTaGCCCTCACGCAATTCTTCTTCAGGCTTAGCCTGTCTCAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: SFFREVIEDREDTLI*PSRNSSSGLACLRN Trigger: ATTTCTGAGACAGGCTAAGCCTGAAGAAGAATTGCGTGAGGGCAAGATGAGTGTGTCTTCCCTGTCTTCTATCACCTCTCTAAAGAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS TCA 72 bp | TTAGCCTGTCTCAGAAATCTCTTGTATAGCTCAGTTTaGAGGGGTGTCAGCCTACAACAAACCACCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LACLRNLLYSSV*RGVSLQQTTCS Trigger: TGAGCAGGTGGTTTGTTGTAGGCTGACACCCCTTCAAACTGAGCTATACAAGAGATTTCTGAGACAGGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS TCA 72 bp | CACGGCCAGAATGTAATCAAGGACCAGCATCTTACCTaGCAACTGTGGCTCTACAGCTTTAGAGTTATAACC | + |
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Preference number: 6 (lower is better) Translates to: HGQNVIKDQHLT*QLWLYSFRVIT Trigger: GGTTATAACTCTAAAGCTGTAGAGCCACAGTTGTCAGGTAAGATGCTGGTCCTTGATTACATTCTGGCCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS TCA 72 bp | GGCTTTGACAAAATACTTCGAATAAATGCTTCATGTTaGCTGCTATCCAGACAAGGTGGCCGGTTGAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: GFDKILRINASC*LLSRQGGRLSS Trigger: GCTACTCAACCGGCCACCTTGTCTGGATAGCAGTCAACATGAAGCATTTATTCGAAGTATTTTGTCAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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| CDS TCA 72 bp | CGCAATACCTTACTGAGAATAGGATCAACAACCACGTaGACAGGGAGTTTTTCCTTGTCAAGCTTCAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: RNTLLRIGSTTT*TGSFSLSSFSW Trigger: CCAACTGAAGCTTGACAAGGAAAAACTCCCTGTTCACGTGGTTGTTGATCCTATTCTCAGTAAGGTATTGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102704.4 ENSMUST00000102705.10 |
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