Pregenerated sensors for RAD52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030166Ensembl transcript IDs: ENSMUST00000032269.12, ENSMUST00000161045.8, ENSMUST00000162461.7
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGCTGTGTTTTGGAGGGGCTGGAAGTACTGCCGCATGCTTGGCTaGCACCTCTTCGGCAGGTGCATGGCTCTGCCGGCGAGTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: GAVFWRGWKYCRMLG*HLFGRCMALPASLH Trigger: ATGGAGACTCGCCGGCAGAGCCATGCACCTGCCGAAGAGGTGGCAGCCAAGCATGCGGCAGTACTTCCAGCCCCTCCAAAACACAGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CCA 90 bp | GTTGGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTTGTaGTTTCTGATGGCAATGGATATGTGGGACGCTGTCCTGGTTGTT | + |
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Preference number: 1 (lower is better) Translates to: VGVAGLQVPRSRLFL*FLMAMDMWDAVLVV Trigger: AACAACCAGGACAGCGTCCCACATATCCATTGCCATCAGAAACCACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CCA 90 bp | TCCTATGAGGTTCAGAGTCTTCTCTGCTACCTAGAACATGCTGGTTaGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: SYEVQSLLCYLEHAG*CCRSAGAQVQAFLV Trigger: CACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAACCTCATAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR TCA 90 bp | GTGGTTTCTGATGGCAATGGATATGTGGGACGCTGTCCTGGTTGTTaGAGGTTCGAGTGGCAGAAGTTTGGGCTGGTTCTGCTCTACACA | + |
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Preference number: 1 (lower is better) Translates to: VVSDGNGYVGRCPGC*RFEWQKFGLVLLYT Trigger: TGTGTAGAGCAGAACCAGCCCAAACTTCTGCCACTCGAACCTTCAACAACCAGGACAGCGTCCCACATATCCATTGCCATCAGAAACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CCA 90 bp | TGTGGGACGCTGTCCTGGTTGTTGAAGGTTCGAGTGGCAGAAGTTTaGGCTGGTTCTGCTCTACACAAGGGCTTAATGATGTCCTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: CGTLSWLLKVRVAEV*AGSALHKGLMMSSK Trigger: CTTAGAGGACATCATTAAGCCCTTGTGTAGAGCAGAACCAGCCCAAACTTCTGCCACTCGAACCTTCAACAACCAGGACAGCGTCCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCATCTGTTCCCGGAACTGCTGCTGGAGCTGCTTCTGCCGGAGCTTCCGGAGCATTCCCAAAACTCCTaGGTGCTCGCTTCAGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LHLFPELLLELLLPELPEHSQNS*VLASAH Trigger: ATGGGCTGAAGCGAGCACTCAGGAGTTTTGGGAATG...CTCCGGAAGCTCCGGCAGAAGCAGCTCCAGCAGCAGTTCCGGGAACAGATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CAA 90 bp | CTGGTTGGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTaGTGGTTTCTGATGGCAATGGATATGTGGGACGCTGTCCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LVGVAGLQVPRSRLF*WFLMAMDMWDAVLV Trigger: AACCAGGACAGCGTCCCACATATCCATTGCCATCAGAAACCACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTGGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTTGTGGTTTGGAAGTCACTTCCTGTaGTTTGGGGAGTCCCAATGC | + |
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Preference number: 2 (lower is better) Translates to: LVGVAGLQVPRSRLFLWFGSHFL*FGESQC Trigger: GCATTGGGACTCCCCAAACCACAGGAAGTGACTTCC...AAACCACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGCTCTGCCGGCGAGTCTCCATCTGTTCCCGGAACTGCTGCTGGAGCTGCTAATACAGTTTCCAAGTaGATTCCCAAAACTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HGSAGESPSVPGTAAGAANTVSK*IPKTPE Trigger: CTCAGGAGTTTTGGGAATGCACTTGGAAACTGTATT...AGCAGCTCCAGCAGCAGTTCCGGGAACAGATGGAGACTCGCCGGCAGAGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTCCATCTGTTCCCGGAACTGCTGCTGGAGCTGCTTCTGCCGGAGCTTCCCAGCATGAGCCAAGGTaGAACAATTTTGTGACCAAA | + |
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Preference number: 2 (lower is better) Translates to: ESPSVPGTAAGAASAGASQHEPR*NNFVTK Trigger: TTTGGTCACAAAATTGTTCCACCTTGGCTCATGCTG...GGAAGCTCCGGCAGAAGCAGCTCCAGCAGCAGTTCCGGGAACAGATGGAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTCTTCCTATGAGGTTCAGAGTCTTCTCTGCTACCTAGAACATGCTGGTGCTTCCTCTGGTGAGTaGCGTCACTCTCCAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PGSSYEVQSLLCYLEHAGASSGE*RHSPRW Trigger: CCACCTTGGAGAGTGACGCCACTCACCAGAGGAAGC...ACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAACCTCATAGGAAGAGCCAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTGGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTTGTGGTTTTCACTTCCTGTGGTTTaGGGAGTCCCAATGCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LVGVAGLQVPRSRLFLWFSLPVV*GVPMLH Trigger: ATGAAGCATTGGGACTCCCCAAACCACAGGAAGTGA...AAACCACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTATGAGGTTCAGAGTCTTCTCTGCTACCTAGAACATGCTGGTTGGTGTTGCATCTGTTCCCGGAACTaGTGCTGGAGCTGCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: SYEVQSLLCYLEHAGWCCICSRN*CWSCFC Trigger: GCAGAAGCAGCTCCAGCAGCAGTTCCGGGAACAGAT...GCAACACCAACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAACCTCATAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTATGAGGTTCAGAGTCTTCTCTGCTACCTAGAACATGCTGGTTGGTGTTGCTTTGGGGAGTCCCAATaGTTCATTCTGTCGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SYEVQSLLCYLEHAGWCCFGESQ*FILSAA Trigger: AGCTGCCGACAGAATGAAGCATTGGGACTCCCCAAA...GCAACACCAACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAACCTCATAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTATGAGGTTCAGAGTCTTCTCTGCTACCTAGAACATGCTGGTTGGTGTTGCTCCAAAGTCCTTTTGTaGCGGTCTAGTGACATCTTG | + |
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Preference number: 2 (lower is better) Translates to: SYEVQSLLCYLEHAGWCCSKVLL*RSSDIL Trigger: CAAGATGTCACTAGACCGTCACAAAAGGACTTTGGA...GCAACACCAACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAACCTCATAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTATGAGGTTCAGAGTCTTCTCTGCTACCTAGAACATGCTGGTTGGTGTTGCGGTGGAACAATTTTGTaGCCAAACTGCAGTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SYEVQSLLCYLEHAGWCCGGTIL*PNCSFP Trigger: TGGAAAACTGCAGTTTGGTCACAAAATTGTTCCACC...GCAACACCAACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAACCTCATAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACTCCAAAGTCCTTTTGTaGCGGTCTAGTGACATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDSKVLL*RSSDIL Trigger: CAAGATGTCACTAGACCGTCACAAAAGGACTTTGGA...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
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| 3UTR-3UTR TCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTTCCAAAGTCCTTTTGTaGCGGTCTAGTGACATCTTG | + |
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Preference number: 2 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFSKVLL*RSSDIL Trigger: CAAGATGTCACTAGACCGTCACAAAAGGACTTTGGA...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
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| 3UTR-3UTR TCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACGGTGGAACAATTTTGTaGCCAAACTGCAGTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDGGTIL*PNCSFP Trigger: TGGAAAACTGCAGTTTGGTCACAAAATTGTTCCACC...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
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| 3UTR-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACCAGCATGAGCCAAGGTaGAACAATTTTGTGACCAAA | + |
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Preference number: 2 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDQHEPR*NNFVTK Trigger: TTTGGTCACAAAATTGTTCCACCTTGGCTCATGCTG...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
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| 3UTR-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTCAGCATGAGCCAAGGTaGAACAATTTTGTGACCAAA | + |
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Preference number: 2 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFQHEPR*NNFVTK Trigger: TTTGGTCACAAAATTGTTCCACCTTGGCTCATGCTG...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
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| 3UTR GCA 72 bp | TGGCTCTGCCGGCGAGTCTCCATCTGTTCCCGGAACTaGTGCTGGAGCTGCTTCTGCCGGAGCTTCCGGAGC | + |
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Preference number: 3 (lower is better) Translates to: WLCRRVSICSRN*CWSCFCRSFRS Trigger: GCTCCGGAAGCTCCGGCAGAAGCAGCTCCAGCAGCAGTTCCGGGAACAGATGGAGACTCGCCGGCAGAGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR TCA 72 bp | AGCTGCTTCTGCCGGAGCTTCCGGAGCTTCCTCTGGTaGGTGGCGTCACTCTCCAAGGTGGCGGCCAGACTG | + |
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Preference number: 3 (lower is better) Translates to: SCFCRSFRSFLW*VASLSKVAARL Trigger: CAGTCTGGCCGCCACCTTGGAGAGTGACGCCACTCACCAGAGGAAGCTCCGGAAGCTCCGGCAGAAGCAGCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR GCA 72 bp | CTCTGCCGGCGAGTCTCCATCTGTTCCCGGAACTGCTaGTGGAGCTGCTTCTGCCGGAGCTTCCGGAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LCRRVSICSRNC*WSCFCRSFRSF Trigger: GAAGCTCCGGAAGCTCCGGCAGAAGCAGCTCCAGCAGCAGTTCCGGGAACAGATGGAGACTCGCCGGCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR GCA 72 bp | TTTTGGAGGGGCTGGAAGTACTGCCGCATGCTTGGCTaGCACCTCTTCGGCAGGTGCATGGCTCTGCCGGCG | + |
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Preference number: 3 (lower is better) Translates to: FWRGWKYCRMLG*HLFGRCMALPA Trigger: CGCCGGCAGAGCCATGCACCTGCCGAAGAGGTGGCAGCCAAGCATGCGGCAGTACTTCCAGCCCCTCCAAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR GCA 72 bp | GTGCTGTGTTTTGGAGGGGCTGGAAGTACTGCCGCATaGTTGGCTGCCACCTCTTCGGCAGGTGCATGGCTC | + |
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Preference number: 3 (lower is better) Translates to: VLCFGGAGSTAA*LAATSSAGAWL Trigger: GAGCCATGCACCTGCCGAAGAGGTGGCAGCCAAGCATGCGGCAGTACTTCCAGCCCCTCCAAAACACAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CCA 72 bp | TGTGTTTTGGAGGGGCTGGAAGTACTGCCGCATGCTTaGCTGCCACCTCTTCGGCAGGTGCATGGCTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: CVLEGLEVLPHA*LPPLRQVHGSA Trigger: GGCAGAGCCATGCACCTGCCGAAGAGGTGGCAGCCAAGCATGCGGCAGTACTTCCAGCCCCTCCAAAACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR CAA 90 bp | CTCCATCTGTTCCCGGAACTGCTGCTGGAGCTGCTTCTGCCGGAGCTTCCGGAGAACAAAGTTTATCTGTaGGCCTCCTTCCCATCATGG | + |
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Preference number: 3 (lower is better) Translates to: LHLFPELLLELLLPELPENKVYL*ASFPSW Trigger: CCATGATGGGAAGGAGGCCAACAGATAAACTTTGTT...CTCCGGAAGCTCCGGCAGAAGCAGCTCCAGCAGCAGTTCCGGGAACAGATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CCA 72 bp | GCAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTTGTaGTTTCTGATGGCAATGGATATGTGGGACGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: AGLQVPRSRLFL*FLMAMDMWDAV Trigger: GACAGCGTCCCACATATCCATTGCCATCAGAAACCACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CCA 72 bp | GTTCAGAGTCTTCTCTGCTACCTAGAACATGCTGGTTaGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: VQSLLCYLEHAG*CCRSAGAQVQA Trigger: AGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGTTGGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTTGTGGTTTGTCACTTCCTGTGGTTaGGGGAGTCCCAATGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: LVGVAGLQVPRSRLFLWFVTSCG*GSPNAS Trigger: TGAAGCATTGGGACTCCCCAAACCACAGGAAGTGAC...AAACCACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR GCA 72 bp | CTGCTACCTAGAACATGCTGGTTGGTGTTGCAGGTCTaGAGGTGCCCAGGTCCAGGCTTTTCTTGTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: LLPRTCWLVLQV*RCPGPGFSCGF Trigger: GAAACCACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAGCATGTTCTAGGTAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGGCTCTTCCTATGAGGTTCAGAGTCTTCTCTGCTACCTAGAACATGCTGGTCAGGGGTGCTGTGTTTaGGAGGGGCTGGAAGTACTG | + |
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Preference number: 3 (lower is better) Translates to: PGSSYEVQSLLCYLEHAGQGCCV*EGLEVL Trigger: CAGTACTTCCAGCCCCTCCAAAACACAGCACCCCTG...ACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAACCTCATAGGAAGAGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR GCA 72 bp | AGTCTTCTCTGCTACCTAGAACATGCTGGTTGGTGTTaGAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: SLLCYLEHAGWC*RSAGAQVQAFL Trigger: AAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAGCATGTTCTAGGTAGCAGAGAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR TCA 72 bp | GTTATCTGGAAAGACGACTTTCTCCTGGAGGAGTTCTaGGGCTGCAGTTACAGGGGTGCTGTGTTTTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: VIWKDDFLLEEF*GCSYRGAVFWR Trigger: CCTCCAAAACACAGCACCCCTGTAACTGCAGCCTCAGAACTCCTCCAGGAGAAAGTCGTCTTTCCAGATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR GCA 72 bp | GGTCCTGGCTCTTCCTATGAGGTTCAGAGTCTTCTCTaGTACCTAGAACATGCTGGTTGGTGTTGCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: GPGSSYEVQSLL*YLEHAGWCCRS Trigger: AGACCTGCAACACCAACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAACCTCATAGGAAGAGCCAGGACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CCA 72 bp | CTGTCCTGGTTGTTGAAGGTTCGAGTGGCAGAAGTTTaGGCTGGTTCTGCTCTACACAAGGGCTTAATGATG | + |
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Preference number: 3 (lower is better) Translates to: LSWLLKVRVAEV*AGSALHKGLMM Trigger: CATCATTAAGCCCTTGTGTAGAGCAGAACCAGCCCAAACTTCTGCCACTCGAACCTTCAACAACCAGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CCA 72 bp | AGGCTTTTCTTGTGGTTTCTGATGGCAATGGATATGTaGGACGCTGTCCTGGTTGTTGAAGGTTCGAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: RLFLWFLMAMDM*DAVLVVEGSSG Trigger: GCCACTCGAACCTTCAACAACCAGGACAGCGTCCCACATATCCATTGCCATCAGAAACCACAAGAAAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGGCTCTTCCTATGAGGTTCAGAGTCTTCTCTGCTACCTAGAACATGCTGGTAGGTCCAGGCTTTTCTaGTGGTTTCTGATGGCAATG | + |
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Preference number: 3 (lower is better) Translates to: PGSSYEVQSLLCYLEHAGRSRLF*WFLMAM Trigger: CATTGCCATCAGAAACCACAAGAAAAGCCTGGACCT...ACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAACCTCATAGGAAGAGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CAA 72 bp | CTGTGTTTTGGAGGGGCTGGAAGTACTGCCGCATGCTaGGCTGCCACCTCTTCGGCAGGTGCATGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LCFGGAGSTAAC*AATSSAGAWLC Trigger: GCAGAGCCATGCACCTGCCGAAGAGGTGGCAGCCAAGCATGCGGCAGTACTTCCAGCCCCTCCAAAACACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| 3UTR CAA 72 bp | GGTTCAGAGTCTTCTCTGCTACCTAGAACATGCTGGTaGGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GSESSLLPRTCW*VLQVCRCPGPG Trigger: GCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAGCATGTTCTAGGTAGCAGAGAAGACTCTGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| CDS-3UTR CCA 90 bp | CTGGTTGGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTTGTGGTTTCCAACAAAGGGAGGATaGTTGTCACACCCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LVGVAGLQVPRSRLFLWFPTKGG*LSHPLW Trigger: CCACAGAGGGTGTGACAACCATCCTCCCTTTGTTGG...AAACCACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| CDS-3UTR CCA 90 bp | CTGGTTGGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTTGTGGTTTTCAGAGCTTTCTGGATaGCCTGGTATTCATCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LVGVAGLQVPRSRLFLWFSELSG*PGIHPL Trigger: CAGCGGATGAATACCAGGCCATCCAGAAAGCTCTGA...AAACCACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| CDS-3UTR TCA 90 bp | GATCTGCAAGGGGAAGTCACTTCCTGTGGTTTGGGGAGTCCCAATGCTTCATTCGTCAACAAAATCTTCTaGCCTCCTCCAGCCATGCGG | + |
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Preference number: 4 (lower is better) Translates to: DLQGEVTSCGLGSPNASFVNKIF*PPPAMR Trigger: CCGCATGGCTGGAGGAGGTCAGAAGATTTTGTTGAC...GAATGAAGCATTGGGACTCCCCAAACCACAGGAAGTGACTTCCCCTTGCAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
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| CDS-3UTR GCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACTGCCGCATGCTTGGCTaGCACCTCTTCGGCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDCRMLG*HLFGRC Trigger: GCACCTGCCGAAGAGGTGGCAGCCAAGCATGCGGCA...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
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| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTTCCCGGAACTGCTGCTaGAGCTGCTTCTGCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFSRNCC*SCFCRS Trigger: GCTCCGGCAGAAGCAGCTCCAGCAGCAGTTCCGGGA...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
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| CDS-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACTCCCGGAACTGCTGCTaGAGCTGCTTCTGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDSRNCC*SCFCRS Trigger: GCTCCGGCAGAAGCAGCTCCAGCAGCAGTTCCGGGA...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR TCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACCGGAGCTTCCTCTGGTaGGTGGCGTCACTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDRSFLW*VASLSK Trigger: CTTGGAGAGTGACGCCACTCACCAGAGGAAGCTCCG...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | GATCTGCAAGGGGAAGTCACTTCCTGTGGTTTGGGGAGTCCCAATGCTTCATTCTGTCTCAGAGCTTTCTaGATGGCCTGGTATTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: DLQGEVTSCGLGSPNASFCLRAF*MAWYSS Trigger: GGATGAATACCAGGCCATCCAGAAAGCTCTGAGACA...GAATGAAGCATTGGGACTCCCCAAACCACAGGAAGTGACTTCCCCTTGCAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161045.8 |
||
| CDS-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACGTACTGCCGCATGCTTaGCTGCCACCTCTTCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDVLPHA*LPPLRQ Trigger: CTGCCGAAGAGGTGGCAGCCAAGCATGCGGCAGTAC...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR TCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTCTCCTGGAGGAGTTCTaGGGCTGCAGTTACAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFLLEEF*GCSYRG Trigger: ACCCCTGTAACTGCAGCCTCAGAACTCCTCCAGGAG...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR GCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTCATGCTGGTTGGTGTTaGAGGTCTGCAGGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFHAGWC*RSAGAQ Trigger: CTGGGCACCTGCAGACCTGCAACACCAACCAGCATG...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTGCTTCCTCTGGTGAGTaGCGTCACTCTCCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFASSGE*RHSPRW Trigger: CCACCTTGGAGAGTGACGCCACTCACCAGAGGAAGC...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACGCTTCCTCTGGTGAGTaGCGTCACTCTCCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDASSGE*RHSPRW Trigger: CCACCTTGGAGAGTGACGCCACTCACCAGAGGAAGC...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR TCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACCGCTGTCCTGGTTGTTaGAGGTTCGAGTGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDRCPGC*RFEWQK Trigger: CTTCTGCCACTCGAACCTTCAACAACCAGGACAGCG...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR TCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTCGCTGTCCTGGTTGTTaGAGGTTCGAGTGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFRCPGC*RFEWQK Trigger: CTTCTGCCACTCGAACCTTCAACAACCAGGACAGCG...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR GCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACATCTGTTCCCGGAACTaGTGCTGGAGCTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDICSRN*CWSCFC Trigger: GCAGAAGCAGCTCCAGCAGCAGTTCCGGGAACAGAT...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR TCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTCATTCCCAAAACTCCTaGGTGCTCGCTTCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFHSQNS*VLASAH Trigger: ATGGGCTGAAGCGAGCACTCAGGAGTTTTGGGAATG...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACTTGTCACACCCTCTGTaGACTGCTTCTTCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDLSHPL*TASSGP Trigger: TGGGCCTGAAGAAGCAGTCCACAGAGGGTGTGACAA...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTTTGTCACACCCTCTGTaGACTGCTTCTTCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFLSHPL*TASSGP Trigger: TGGGCCTGAAGAAGCAGTCCACAGAGGGTGTGACAA...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTCCAACAAAGGGAGGATaGTTGTCACACCCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFPTKGG*LSHPLW Trigger: CCACAGAGGGTGTGACAACCATCCTCCCTTTGTTGG...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTGGAAGTCACTTCCTGTaGTTTGGGGAGTCCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFGSHFL*FGESQC Trigger: GCATTGGGACTCCCCAAACCACAGGAAGTGACTTCC...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACCGAGTGGCAGAAGTTTaGGCTGGTTCTGCTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDRVAEV*AGSALH Trigger: GTGTAGAGCAGAACCAGCCCAAACTTCTGCCACTCG...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTCGAGTGGCAGAAGTTTaGGCTGGTTCTGCTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFRVAEV*AGSALH Trigger: GTGTAGAGCAGAACCAGCCCAAACTTCTGCCACTCG...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR TCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTTCCTGGCTCTTCCTATaGGGTTCAGAGTCTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFSWLFL*GSESLL Trigger: TAGCAGAGACTCTGAACCTCATAGGAAGAGCCAGGA...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032269.12 |
||
| CDS-3UTR TCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACTCCTGGCTCTTCCTATaGGGTTCAGAGTCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDSWLFL*GSESSL Trigger: CAGAGAAGACTCTGAACCTCATAGGAAGAGCCAGGA...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162461.7 |
||
| CDS-3UTR GCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTTTTGGGGAGTCCCAATaGTTCATTCTGTCGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFFGESQ*FILSAA Trigger: AGCTGCCGACAGAATGAAGCATTGGGACTCCCCAAA...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 46% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTTCATCCGCTGTATACTaGCTCTGTCCAAAGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFSSAVY*LCPKRS Trigger: GCTCCTCTTTGGACAGAGCCAGTATACAGCGGATGA...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACTCAGAGCTTTCTGGATaGCCTGGTATTCATCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDSELSG*PGIHPL Trigger: CAGCGGATGAATACCAGGCCATCCAGAAAGCTCTGA...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTTCAGAGCTTTCTGGATaGCCTGGTATTCATCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFSELSG*PGIHPL Trigger: CAGCGGATGAATACCAGGCCATCCAGAAAGCTCTGA...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACGCTGCTAATGTACTCTaGACCCAGTCTCTGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDAANVL*TQSLSQ Trigger: CTGAGACAGAGACTGGGTCCAGAGTACATTAGCAGC...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
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| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTGCTGCTAATGTACTCTaGACCCAGTCTCTGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFAANVL*TQSLSQ Trigger: CTGAGACAGAGACTGGGTCCAGAGTACATTAGCAGC...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTTGTCTCAGAGCTTTCTaGATGGCCTGGTATTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFCLRAF*MAWYSS Trigger: GGATGAATACCAGGCCATCCAGAAAGCTCTGAGACA...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACTGTCTCAGAGCTTTCTaGATGGCCTGGTATTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDCLRAF*MAWYSS Trigger: GGATGAATACCAGGCCATCCAGAAAGCTCTGAGACA...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACTCACTTCCTGTGGTTTaGGGAGTCCCAATGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDSLPVV*GVPMLH Trigger: ATGAAGCATTGGGACTCCCCAAACCACAGGAAGTGA...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR GCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTAGTTTGGGCTGGTTCTaGTCTACACAAGGGCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFSLGWF*STQGLN Trigger: ATTAAGCCCTTGTGTAGAGCAGAACCAGCCCAAACT...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR TCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACTTTTCTTGTGGTTTCTaGTGGCAATGGATATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDFSCGF*WQWICG Trigger: CCCACATATCCATTGCCATCAGAAACCACAAGAAAA...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR TCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTTTTTCTTGTGGTTTCTaGTGGCAATGGATATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFFSCGF*WQWICG Trigger: CCCACATATCCATTGCCATCAGAAACCACAAGAAAA...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 42% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACTCCAGGCTTTTCTTGTaGTTTCTGATGGCAATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDSRLFL*FLMAMD Trigger: ATCCATTGCCATCAGAAACCACAAGAAAAGCCTGGA...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTTCCAGGCTTTTCTTGTaGTTTCTGATGGCAATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFSRLFL*FLMAMD Trigger: ATCCATTGCCATCAGAAACCACAAGAAAAGCCTGGA...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR GCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACGAACCATCCTTTAACTaGACCTTTACAAATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDEPSFN*TFTNAQ Trigger: CTGTGCATTTGTAAAGGTGCAGTTAAAGGATGGTTC...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR GCA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAATACAGTTTCCAAGTaGATTCCCAAAACTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDNTVSK*IPKTPE Trigger: CTCAGGAGTTTTGGGAATGCACTTGGAAACTGTATT...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR GCA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTAATACAGTTTCCAAGTaGATTCCCAAAACTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFNTVSK*IPKTPE Trigger: CTCAGGAGTTTTGGGAATGCACTTGGAAACTGTATT...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS CCA 90 bp | TCTTCCTATGAGGTTCAGAGTCTCTGCTACCTAGAACATGCTGGTTaGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSYEVQSLCYLEHAG*CCRSAGAQVQAFLV Trigger: CACAAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAGCATGTTCTAGGTAGCAGAGACTCTGAACCTCATAGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032269.12 |
||
| CDS-3UTR CAA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACCAGGGGTGCTGTGTTTaGGAGGGGCTGGAAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDQGCCV*EGLEVL Trigger: CAGTACTTCCAGCCCCTCCAAAACACAGCACCCCTG...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CAA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTCAGGGGTGCTGTGTTTaGGAGGGGCTGGAAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFQGCCV*EGLEVL Trigger: CAGTACTTCCAGCCCCTCCAAAACACAGCACCCCTG...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CAA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTCCTAGAACATGCTGGTaGGTGTTGCAGGTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFPRTCW*VLQVCR Trigger: CCTGCAGACCTGCAACACCAACCAGCATGTTCTAGG...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CAA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACCCTAGAACATGCTGGTaGGTGTTGCAGGTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDPRTCW*VLQVCR Trigger: CCTGCAGACCTGCAACACCAACCAGCATGTTCTAGG...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CAA 90 bp | GAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAACCTTTTTGTCACTTCCTGTGGTTaGGGGAGTCCCAATGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQSLSVGLLPIMGYDNLFVTSCG*GSPNAS Trigger: TGAAGCATTGGGACTCCCCAAACCACAGGAAGTGAC...AAAAAGGTTGTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
||
| CDS-3UTR CAA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACGTCACTTCCTGTGGTTaGGGGAGTCCCAATGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDVTSCG*GSPNAS Trigger: TGAAGCATTGGGACTCCCCAAACCACAGGAAGTGAC...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
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| CDS-3UTR CAA 90 bp | AGTAATACTGAACAAAGTTTATCTGTTGGCCTCCTTCCCATCATGGGGTATGACAGGTCCAGGCTTTTCTaGTGGTTTCTGATGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: SNTEQSLSVGLLPIMGYDRSRLF*WFLMAM Trigger: CATTGCCATCAGAAACCACAAGAAAAGCCTGGACCT...GTCATACCCCATGATGGGAAGGAGGCCAACAGATAAACTTTGTTCAGTATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032269.12 ENSMUST00000162461.7 |
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| CDS CCA 72 bp | GAGGTTCAGAGTCTCTGCTACCTAGAACATGCTGGTTaGTGTTGCAGGTCTGCAGGTGCCCAGGTCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: EVQSLCYLEHAG*CCRSAGAQVQA Trigger: AGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAGCATGTTCTAGGTAGCAGAGACTCTGAACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032269.12 |
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| CDS GCA 72 bp | CAGAGTCTCTGCTACCTAGAACATGCTGGTTGGTGTTaGAGGTCTGCAGGTGCCCAGGTCCAGGCTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: QSLCYLEHAGWC*RSAGAQVQAFL Trigger: AAGAAAAGCCTGGACCTGGGCACCTGCAGACCTGCAACACCAACCAGCATGTTCTAGGTAGCAGAGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032269.12 |
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| CDS CCA 72 bp | ACTCTGGACCCAGTCTCTGTCTCAGAGCTTTCTGGATaGCCTGGTATTCATCCGCTGTATACTGGCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: TLDPVSVSELSG*PGIHPLYTGSV Trigger: GACAGAGCCAGTATACAGCGGATGAATACCAGGCCATCCAGAAAGCTCTGAGACAGAGACTGGGTCCAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032269.12 ENSMUST00000161045.8 ENSMUST00000162461.7 |
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