Pregenerated sensors for RAD51D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018841Ensembl transcript IDs: ENSMUST00000018985.15, ENSMUST00000021033.16, ENSMUST00000092844.13, ENSMUST00000100718.4, ENSMUST00000135963.8, ENSMUST00000146053.8
Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTTGGTCACCACCACTGCCACACCCAGGTCCCGGGCCAGGATCTTaGGCTCTCGGGCCAGCTGCATCATCAAGGCCAGGCCTTCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: GWSPPLPHPGPGPGS*ALGPAASSRPGLPS Trigger: AGAGGGAAGGCCTGGCCTTGATGATGCAGCTGGCCCGAGAGCTCAAGATCCTGGCCCGGGACCTGGGTGTGGCAGTGGTGGTGACCAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR TCA 90 bp | CAGGGCAGACCCGCCCAGGGGAGAGCCGGCAACCGGGCTCCTCCCTaGACACCCAAGTCCCTAACTTGCAGTGGTTCCTTGCAAAACTGC | + |
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Preference number: 1 (lower is better) Translates to: QGRPAQGRAGNRAPP*TPKSLTCSGSLQNC Trigger: GCAGTTTTGCAAGGAACCACTGCAAGTTAGGGACTTGGGTGTTCAGGGAGGAGCCCGGTTGCCGGCTCTCCCCTGGGCGGGTCTGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | AGACCCGTTGGCTGGCGGGGAGACTTGGTCAGACATACTGTGCGTTaGCTGCTACCGAGTGTCCCAGCCCCCTCAGTGACATCCAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: RPVGWRGDLVRHTVR*LLPSVPAPSVTSRR Trigger: TCTCCTGGATGTCACTGAGGGGGCTGGGACACTCGGTAGCAGCCAACGCACAGTATGTCTGACCAAGTCTCCCCGCCAGCCAACGGGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR TCA 90 bp | GGCCTTCCCTCTGCTGACCTCCCAGAAGTGGGGCGACCACTGCAGTaGCCGAGTCCACAATCACAACCTTCACGGCGCCTGAAGAAGTTG | + |
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Preference number: 1 (lower is better) Translates to: GLPSADLPEVGRPLQ*PSPQSQPSRRLKKL Trigger: CAACTTCTTCAGGCGCCGTGAAGGTTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR TCA 90 bp | GACATACTGTGCGTTGGCTGCTACCGAGTGTCCCAGCCCCCTCAGTaGCATCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: DILCVGCYRVSQPPQ*HPGESGYWAQSSRS Trigger: GCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGATGTCACTGAGGGGGCTGGGACACTCGGTAGCAGCCAACGCACAGTATGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR TCA 90 bp | TGGCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCTTaGGGCTGTCCCTTTCCCAATCAACAGTGTCACGTCTGCTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: WQGTVAAREGKLWGP*GCPFPNQQCHVCLP Trigger: TGGCAAGCAGACGTGACACTGTTGATTGGGAAAGGGACAGCCTCAAGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR GCA 90 bp | TCTTCTACCATCCCAATCTCGAGTCAAGTGGTTGGTCACCACCACTaGCACACCCAGGTCCCGGGCCAGGATCTTGAGCTCTCGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SSTIPISSQVVGHHH*HTQVPGQDLELSGQ Trigger: CTGGCCCGAGAGCTCAAGATCCTGGCCCGGGACCTGGGTGTGGCAGTGGTGGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | TTGTCTTCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTaGCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: LSSDEPETSALLGPM*QGTVAAREGKLWGP Trigger: AGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGAAGACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR TCA 90 bp | GACCACTGCAGTGACCGAGTCCACAATCACAACCTTCACGGCGCCTaGAGAAGTTGCTTCCTGCTGGGCTATGGTGCCGCGAAGGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: DHCSDRVHNHNLHGA*RSCFLLGYGAAKVL Trigger: CAGGACCTTCGCGGCACCATAGCCCAGCAGGAAGCAACTTCTTCAGGCGCCGTGAAGGTTGTGATTGTGGACTCGGTCACTGCAGTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | CTGCATCATCAAGGCCAGGCCTTCCCTCTGCTGACCTCCCAGAAGTaGGGCGACCACTGCAGTGACCGAGTCCACAATCACAACCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: LHHQGQAFPLLTSQK*GDHCSDRVHNHNLH Trigger: GTGAAGGTTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGCCTGGCCTTGATGATGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR GCA 90 bp | GGGCTCTGCTCCTCAGTCCCCAATGTCCCAATGTCTATCATCTCCTaGAGACCCGTTGGCTGGCGGGGAGACTTGGTCAGACATACTGTG | + |
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Preference number: 1 (lower is better) Translates to: GLCSSVPNVPMSIIS*RPVGWRGDLVRHTV Trigger: CACAGTATGTCTGACCAAGTCTCCCCGCCAGCCAACGGGTCTGCAGGAGATGATAGACATTGGGACATTGGGGACTGAGGAGCAGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | GTCCCCAATGTCCCAATGTCTATCATCTCCTGCAGACCCGTTGGCTaGCGGGGAGACTTGGTCAGACATACTGTGCGTTGGCTGCTACCG | + |
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Preference number: 1 (lower is better) Translates to: VPNVPMSIISCRPVG*RGDLVRHTVRWLLP Trigger: CGGTAGCAGCCAACGCACAGTATGTCTGACCAAGTCTCCCCGCCAGCCAACGGGTCTGCAGGAGATGATAGACATTGGGACATTGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | CTCAGTCCCCAATGTCCCAATGTCTATCATCTCCTGCAGACCCGTTaGCTGGCGGGGAGACTTGGTCAGACATACTGTGCGTTGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: LSPQCPNVYHLLQTR*LAGRLGQTYCALAA Trigger: AGCAGCCAACGCACAGTATGTCTGACCAAGTCTCCCCGCCAGCCAACGGGTCTGCAGGAGATGATAGACATTGGGACATTGGGGACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | CACATTTGCAGCCACACAGAGACACACCTGGGTTTTGCCGCTACCTaGGCCACCCACAATTTCAGTCACCTCCCCAGTATAGAGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: HICSHTETHLGFAAT*ATHNFSHLPSIEAS Trigger: GCTGGCCTCTATACTGGGGAGGTGACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACCCAGGTGTGTCTCTGTGTGGCTGCAAATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | CCTGGATTCGAGTCATCCCACATTTGTGGGATGGAGAGCAGGGGCTaGGGGTGTGGGAGACAATCCAGGCCAAATGATCCTTATGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: PGFESSHICGMESRG*GCGRQSRPNDPYGS Trigger: AGACCCATAAGGATCATTTGGCCTGGATTGTCTCCCACACCCCCAGCCCCTGCTCTCCATCCCACAAATGTGGGATGACTCGAATCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | ACCACCTGTATCCTCTGGAGAGCACTTGCCTGTTTCTCCTCATCTTaGGTTCTAGCCTGTAGTAGCTGGAGGAGGCGGGACGCCGTCATT | + |
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Preference number: 1 (lower is better) Translates to: TTCILWRALACFSSS*VLACSSWRRRDAVI Trigger: AATGACGGCGTCCCGCCTCCTCCAGCTACTACAGGCTAGAACCCAAGATGAGGAGAAACAGGCAAGTGCTCTCCAGAGGATACAGGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR TCA 90 bp | TCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTaGATCTTCTACCATCCCAATCTCGAGTCAAGTGGTTGGTCACCA | + |
|
Preference number: 1 (lower is better) Translates to: SGYWAQSSRSVQGQV*IFYHPNLESSGWSP Trigger: TGGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR GCA 90 bp | CGGGACGCCGTCATTCCTCCATTGGAATCCACATACAGTACATTCTaGTGCAGGCTATGGGCCACATTTGCAGCCACACAGAGACACACC | + |
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Preference number: 1 (lower is better) Translates to: RDAVIPPLESTYSTF*CRLWATFAATQRHT Trigger: GGTGTGTCTCTGTGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAATGTACTGTATGTGGATTCCAATGGAGGAATGACGGCGTCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR GCA 90 bp | CAACCTTCACGGCGCCTGAAGAAGTTGCTTCCTGCTGGGCTATGGTaGCGCGAAGGTCCTGTAGCATATCTAGCATCCGGAAGATGTCAA | + |
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Preference number: 1 (lower is better) Translates to: QPSRRLKKLLPAGLW*REGPVAYLASGRCQ Trigger: TTGACATCTTCCGGATGCTAGATATGCTACAGGACCTTCGCGGCACCATAGCCCAGCAGGAAGCAACTTCTTCAGGCGCCGTGAAGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | GCACTTGCCTGTTTCTCCTCATCTTGGGTTCTAGCCTGTAGTAGCTaGAGGAGGCGGGACGCCGTCATTCCTCCATTGGAATCCACATAC | + |
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Preference number: 1 (lower is better) Translates to: ALACFSSSWVLACSS*RRRDAVIPPLESTY Trigger: GTATGTGGATTCCAATGGAGGAATGACGGCGTCCCGCCTCCTCCAGCTACTACAGGCTAGAACCCAAGATGAGGAGAAACAGGCAAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR TCA 90 bp | TTATATCCCTGGGACAGCAGCGAGCTGTGTTCTCACCTATCAGGGTaGGGTATGCAGGTGTGTGAAACCCAGTCAGCAAGCAGGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: LYPWDSSELCSHLSG*GMQVCETQSASREG Trigger: TCCTTCCCTGCTTGCTGACTGGGTTTCACACACCTGCATACCTCACCCTGATAGGTGAGAACACAGCTCGCTGCTGTCCCAGGGATATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR GCA 90 bp | GACGCCGTCATTCCTCCATTGGAATCCACATACAGTACATTCTGCTaGAGGCTATGGGCCACATTTGCAGCCACACAGAGACACACCTGG | + |
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Preference number: 1 (lower is better) Translates to: DAVIPPLESTYSTFC*RLWATFAATQRHTW Trigger: CCAGGTGTGTCTCTGTGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAATGTACTGTATGTGGATTCCAATGGAGGAATGACGGCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | TGTGCATCTCAGTGGTGGAAGCTATGGTTAGCACACACAAGGTCCTaGATTCGAGTCATCCCACATTTGTGGGATGGAGAGCAGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: CASQWWKLWLAHTRS*IRVIPHLWDGEQGL Trigger: CAGCCCCTGCTCTCCATCCCACAAATGTGGGATGACTCGAATCCAGGACCTTGTGTGTGCTAACCATAGCTTCCACCACTGAGATGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR GCA 90 bp | CCCAATCAACAGTGTCACGTCTGCTTGCCAGGTAATTCTGGGCTCTaGTCCTCAGTCCCCAATGTCCCAATGTCTATCATCTCCTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: PNQQCHVCLPGNSGL*SSVPNVPMSIISCR Trigger: TCTGCAGGAGATGATAGACATTGGGACATTGGGGACTGAGGAGCAGAGCCCAGAATTACCTGGCAAGCAGACGTGACACTGTTGATTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | AGCCAGAGGACCATTTGCAAGTCTCTCTTCTCTCTTCCCATTATGTaGGACCCAGGGATTGAACTCGGATTGTCTGGCTTGGTGGCAAGC | + |
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Preference number: 1 (lower is better) Translates to: SQRTICKSLFSLPIM*DPGIELGLSGLVAS Trigger: GCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAATGGGAAGAGAGAAGAGAGACTTGCAAATGGTCCTCTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | CTTCTCACTTGGGTTGCAGGAAGTAACCTGCCAACCAACCAGCCATaGTGTAGATACCAGAGACTGATGTCTCCTGGGGTCTTCTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LLTWVAGSNLPTNQP*CRYQRLMSPGVFCG Trigger: TCCACAGAAGACCCCAGGAGACATCAGTCTCTGGTATCTACACCATGGCTGGTTGGTTGGCAGGTTACTTCCTGCAACCCAAGTGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | ATTCCTCCATTGGAATCCACATACAGTACATTCTGCTGCAGGCTATaGGCCACATTTGCAGCCACACAGAGACACACCTGGGTTTTGCCG | + |
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Preference number: 1 (lower is better) Translates to: IPPLESTYSTFCCRL*ATFAATQRHTWVLP Trigger: CGGCAAAACCCAGGTGTGTCTCTGTGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAATGTACTGTATGTGGATTCCAATGGAGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | TCTAGCATCCGGAAGATGTCAAATGAACGCACCACCTGTATCCTCTaGAGAGCACTTGCCTGTTTCTCCTCATCTTGGGTTCTAGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: SSIRKMSNERTTCIL*RALACFSSSWVLAC Trigger: ACAGGCTAGAACCCAAGATGAGGAGAAACAGGCAAGTGCTCTCCAGAGGATACAGGTGGTGCGTTCATTTGACATCTTCCGGATGCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR TCA 90 bp | GTTTATGGGTTAGGCTATGGTTCAGCACCTCTGGTTACTCTAGACTaGGGAAGCACCCCACAGGCCACCATGCATATGAAACAAGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: VYGLGYGSAPLVTLD*GSTPQATMHMKQVS Trigger: AGACACTTGTTTCATATGCATGGTGGCCTGTGGGGTGCTTCCTCAGTCTAGAGTAACCAGAGGTGCTGAACCATAGCCTAACCCATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR GCA 90 bp | GCGCATCAAGAGTGGCCGGTATTTGCTTTGCCTGGTTTAATATATTaGTTCTCACTTGGGTTGCAGGAAGTAACCTGCCAACCAACCAGC | + |
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Preference number: 1 (lower is better) Translates to: AHQEWPVFALPGLIY*FSLGLQEVTCQPTS Trigger: GCTGGTTGGTTGGCAGGTTACTTCCTGCAACCCAAGTGAGAAGCAATATATTAAACCAGGCAAAGCAAATACCGGCCACTCTTGATGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | CTCGATGGCCAAAGCGCATCAAGAGTGGCCGGTATTTGCTTTGCCTaGTTTAATATATTGCTTCTCACTTGGGTTGCAGGAAGTAACCTG | + |
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Preference number: 1 (lower is better) Translates to: LDGQSASRVAGICFA*FNILLLTWVAGSNL Trigger: CAGGTTACTTCCTGCAACCCAAGTGAGAAGCAATATATTAAACCAGGCAAAGCAAATACCGGCCACTCTTGATGCGCTTTGGCCATCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR TCA 90 bp | ATTGAACTCGGATTGTCTGGCTTGGTGGCAAGCATCTTCACTGGCTaGGCCATCTCACTGGCCCTAAATATCAGATCCTATAACTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: IELGLSGLVASIFTG*AISLALNIRSYNCV Trigger: AACACAGTTATAGGATCTGATATTTAGGGCCAGTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGAGTTCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR GCA 90 bp | CTGTGGTCCATAAACAACCCAGATCATTTCTCTCTGCCTTTTATTTaGCGTTCCTGGTACCATCCTCCCCTTTCAGCCAGAGTTATGACT | + |
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Preference number: 1 (lower is better) Translates to: LWSINNPDHFSLPFI*RSWYHPPLSARVMT Trigger: AGTCATAACTCTGGCTGAAAGGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTGGGTTGTTTATGGACCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR TCA 90 bp | CACAGTGTTGGTAACAGACAGGGGGTTATTTTATTCACTAAGACATaGGGCTGTGGTACAGCTGGCAGGACGAGAGGTGTAATTATACTG | + |
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Preference number: 1 (lower is better) Translates to: HSVGNRQGVILFTKT*GCGTAGRTRGVIIL Trigger: CAGTATAATTACACCTCTCGTCCTGCCAGCTGTACCACAGCCTCATGTCTTAGTGAATAAAATAACCCCCTGTCTGTTACCAACACTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR GCA 90 bp | GGGAGACAATCCAGGCCAAATGATCCTTATGGGTCTCTAATACAGTaGTGTTCTCACTCACATATGAAGCACTTGAAATCACAACGGGCA | + |
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Preference number: 1 (lower is better) Translates to: GRQSRPNDPYGSLIQ*CSHSHMKHLKSQRA Trigger: TGCCCGTTGTGATTTCAAGTGCTTCATATGTGAGTGAGAACAGCACTGTATTAGAGACCCATAAGGATCATTTGGCCTGGATTGTCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | TATTTACTGTGCAAATTCTCCTGTGTCTGTTTATGGGTTAGGCTATaGTTCAGCACCTCTGGTTACTCTAGACTGAGGAAGCACCCCACA | + |
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Preference number: 1 (lower is better) Translates to: YLLCKFSCVCLWVRL*FSTSGYSRLRKHPT Trigger: TGTGGGGTGCTTCCTCAGTCTAGAGTAACCAGAGGTGCTGAACCATAGCCTAACCCATAAACAGACACAGGAGAATTTGCACAGTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | ATAAACAACCCAGATCATTTCTCTCTGCCTTTTATTTGCCGTTCCTaGTACCATCCTCCCCTTTCAGCCAGAGTTATGACTCTCAGATGG | + |
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Preference number: 1 (lower is better) Translates to: INNPDHFSLPFICRS*YHPPLSARVMTLRW Trigger: CCATCTGAGAGTCATAACTCTGGCTGAAAGGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTGGGTTGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR GCA 90 bp | ATTATTTACGCCGGCATCAATTTTCCCAGCTGGCTCTATTTACTGTaGAAATTCTCCTGTGTCTGTTTATGGGTTAGGCTATGGTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: IIYAGINFPSWLYLL*KFSCVCLWVRLWFS Trigger: GCTGAACCATAGCCTAACCCATAAACAGACACAGGAGAATTTGCACAGTAAATAGAGCCAGCTGGGAAAATTGATGCCGGCGTAAATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR CCA 90 bp | CTAGATTTGCCATGTATTATTTACGCCGGCATCAATTTTCCCAGCTaGCTCTATTTACTGTGCAAATTCTCCTGTGTCTGTTTATGGGTT | + |
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Preference number: 1 (lower is better) Translates to: LDLPCIIYAGINFPS*LYLLCKFSCVCLWV Trigger: AACCCATAAACAGACACAGGAGAATTTGCACAGTAAATAGAGCCAGCTGGGAAAATTGATGCCGGCGTAAATAATACATGGCAAATCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR-3UTR GCA 90 bp | AACGGGCAGGATACAGGGCAGACCCGCCCAGGGGAGAGCCGGCAACCGGGCTCCAAGTGGGGCGACCACTaGAGTGACCGAGTCCACAAT | + |
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Preference number: 2 (lower is better) Translates to: NGQDTGQTRPGESRQPGSKWGDH*SDRVHN Trigger: ATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTT...GGAGCCCGGTTGCCGGCTCTCCCCTGGGCGGGTCTGCCCTGTATCCTGCCCGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
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| 3UTR CAA 90 bp | TGGTTGGTCACCACCACTGCCACACCCAGGTCCCGGGCCAGGATCTaGAGCTCTCGGGCCAGCTGCATCATCAAGGCCAGGCCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: WLVTTTATPRSRARI*SSRASCIIKARPSL Trigger: GAGGGAAGGCCTGGCCTTGATGATGCAGCTGGCCCGAGAGCTCAAGATCCTGGCCCGGGACCTGGGTGTGGCAGTGGTGGTGACCAACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGCAGGATACAGGGCAGACCCGCCCAGGGGAGAGCCGGCAACCGGGCTCCTCTCGGATTGTCTGGCTTaGTGGCAAGCATCTTCACTG | + |
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Preference number: 2 (lower is better) Translates to: RAGYRADPPRGEPATGLLSDCLA*WQASSL Trigger: CAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGA...GAGGAGCCCGGTTGCCGGCTCTCCCCTGGGCGGGTCTGCCCTGTATCCTGCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGGACACACCTGGGTTTTaGCGCTACCTGGGCCACCCA | + |
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Preference number: 2 (lower is better) Translates to: LQHPLARGSMRSHTMKLRDTPGF*RYLGHP Trigger: TGGGTGGCCCAGGTAGCGGCAAAACCCAGGTGTGTC...CCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTAACCTTCACGGCGCCTaGAGAAGTTGCTTCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PGESGYWAQSSRSVQGQVNLHGA*RSCFLL Trigger: CAGCAGGAAGCAACTTCTTCAGGCGCCGTGAAGGTT...AACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCCCCTCAGTGACATCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGGGCGACCACTGCAGTaGCCGAGTCCACAATCACAA | + |
|
Preference number: 2 (lower is better) Translates to: SPLSDIQENPGTGHKAPGGRPLQ*PSPQSQ Trigger: TTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCC...TCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGATGTCACTGAGGGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGCAAGCAGGGAAGGAGGCACTCTCATTCTCTGGGAGCCCCACTGCACGAAGGGCGACCACTGCAGTaGCCGAGTCCACAATCACAA | + |
|
Preference number: 2 (lower is better) Translates to: VSKQGRRHSHSLGAPLHEGRPLQ*PSPQSQ Trigger: TTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCC...TTCGTGCAGTGGGGCTCCCAGAGAATGAGAGTGCCTCCTTCCCTGCTTGCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
||
| 3UTR CAA 90 bp | CCTCAGTCCCCAATGTCCCAATGTCTATCATCTCCTGCAGACCCGTaGGCTGGCGGGGAGACTTGGTCAGACATACTGTGCGTTGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PQSPMSQCLSSPADP*AGGETWSDILCVGC Trigger: GCAGCCAACGCACAGTATGTCTGACCAAGTCTCCCCGCCAGCCAACGGGTCTGCAGGAGATGATAGACATTGGGACATTGGGGACTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTTGAAATCACAACGGGCAGGATACAGGGCAGACCCGCCCAGGGGAGAGCCTCTCACCTATCAGGGTaGGGTATGCAGGTGTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: ALEITTGRIQGRPAQGRASHLSG*GMQVCE Trigger: TTCACACACCTGCATACCTCACCCTGATAGGTGAGA...GGCTCTCCCCTGGGCGGGTCTGCCCTGTATCCTGCCCGTTGTGATTTCAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTATGTGGGACCCAGGGATTGAACTCGGATTGTCTGGCTTGGTGGCAAGCATCCCAGCCCCCTCAGTaGCATCCAGGAGAATCCGGG | + |
|
Preference number: 2 (lower is better) Translates to: PLCGTQGLNSDCLAWWQASQPPQ*HPGESG Trigger: CCCGGATTCTCCTGGATGTCACTGAGGGGGCTGGGA...TGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | ACGTCTGCTTGCCAGGTAATTCTGGGCTCTGCTCCTCAGTCCCCAATGTCCCAAGCAGGGGACAGTAGCTaGCCGGGAAGGAAAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: TSACQVILGSAPQSPMSQAGDSS*PGRKAV Trigger: CACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC...TTGGGACATTGGGGACTGAGGAGCAGAGCCCAGAATTACCTGGCAAGCAGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGGGCACTCTCATTCTCTaGGAGCCCCACTGCACGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSLQHPLARGSMRSHTMKGTLIL*EPHCTN Trigger: GTTCGTGCAGTGGGGCTCCCAGAGAATGAGAGTGCC...CTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | GGACACTATTCATGCAGGTACTACTGTGTTTCTTCAGTGAGGCCTCAAGCTAGGCCCGGGCCAGGATCTTaGGCTCTCGGGCCAGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GHYSCRYYCVSSVRPQARPGPGS*ALGPAA Trigger: TGCAGCTGGCCCGAGAGCTCAAGATCCTGGCCCGGG...CCTAGCTTGAGGCCTCACTGAAGAAACACAGTAGTACCTGCATGAATAGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCGCAGGGGACAGTAGCTaGCCGGGAAGGAAAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RGSMRSHTMKLRGLRLVFAGDSS*PGRKAV Trigger: CACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC...GAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTCGAGTCAAGTGGTTaGTCACCACCACTGCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: LSLQHPLARGSMRSHTMKLESSG*SPPLPH Trigger: GTGTGGCAGTGGTGGTGACCAACCACTTGACTCGAG...CTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCCCCTTTGTCATTCATCTCCATCCTTCAGGCCTATGCCTATCCCTGCTATGCAGGGGACAGTAGCTaGCCGGGAAGGAAAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PAPLSFISILQAYAYPCYAGDSS*PGRKAV Trigger: CACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC...ATAGCAGGGATAGGCATAGGCCTGAAGGATGGAGATGAATGACAAAGGGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTCCAGGAGCGTCCAAGGGCAGGTTTGAATCTTCTACCATCCCAATCTCGAGACACACCTGGGTTTTaGCGCTACCTGGGCCACCCA | + |
|
Preference number: 2 (lower is better) Translates to: KLQERPRAGLNLLPSQSRDTPGF*RYLGHP Trigger: TGGGTGGCCCAGGTAGCGGCAAAACCCAGGTGTGTC...TCGAGATTGGGATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGCAATCTCGAGTCAAGTaGTTGGTCACCACCACTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SLSLQHPLARGSMRSHTMQSRVK*LVTTTA Trigger: GGCAGTGGTGGTGACCAACCACTTGACTCGAGATTG...CATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR CAA 90 bp | TGGAATCCACATACAGTACATTCTGCTGCAGGCTATGGGCCACATTaGCAGCCACACAGAGACACACCTGGGTTTTGCCGCTACCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: WNPHTVHSAAGYGPH*QPHRDTPGFCRYLG Trigger: GCCCAGGTAGCGGCAAAACCCAGGTGTGTCTCTGTGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAATGTACTGTATGTGGATTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR CAA 90 bp | ATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTaGAATCTTCTACCATCCCAATCTCGAGTCAAGTGGTTGGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: IRVLGTKLQERPRAG*NLLPSQSRVKWLVT Trigger: GGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR-3UTR GCA 90 bp | CATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAGCGCAGGGGACAGTAGCTaGCCGGGAAGGAAAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HEISHNEAEGTEACLLMSAGDSS*PGRKAV Trigger: CACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC...GCTCATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCGGATTGTCTGGCTTGGTGGCAAGCATCTTCACTGGCTGAGCCATCTCACTGGCAAGCATCTTCACTaGCTGAGCCATCTCACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TRIVWLGGKHLHWLSHLTGKHLH*LSHLTG Trigger: GCCAGTGAGATGGCTCAGCCAGTGAAGATGCTTGCC...AGTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGCCGCGAAGGTCCTGTAGCATATCTAGCATCCGGAAGATGTCAAATGAACTAGCCTGTAGTAGCTaGAGGAGGCGGGACGCCGTC | + |
|
Preference number: 2 (lower is better) Translates to: MVPRRSCSISSIRKMSNELACSS*RRRDAV Trigger: GACGGCGTCCCGCCTCCTCCAGCTACTACAGGCTAG...TTCATTTGACATCTTCCGGATGCTAGATATGCTACAGGACCTTCGCGGCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | TTCACGGCGCCTGAAGAAGTTGCTTCCTGCTGGGCTATGGTGCCGCGAAGGTCCCAAAGGAAGAAAACTTaGGACCCTGATGGACTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: FTAPEEVASCWAMVPRRSQRKKT*DPDGLL Trigger: TAGAAGTCCATCAGGGTCTCAAGTTTTCTTCCTTTG...GGACCTTCGCGGCACCATAGCCCAGCAGGAAGCAACTTCTTCAGGCGCCGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTGAATCTTCTACCATCCCACCGGAAGATGTCAAATaGACGCACCACCTGTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: GHKAPGASKGRFESSTIPPEDVK*THHLYP Trigger: AGGATACAGGTGGTGCGTTCATTTGACATCTTCCGG...TGGGATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCCTTTTATTTGCCGTTCCTGGTACCATCCTCCCCTTTCAGCCAGAGTTAATACTGTGCGTTGGCTaGTACCGAGTGTCCCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LCLLFAVPGTILPFQPELILCVG*YRVSQP Trigger: GGGCTGGGACACTCGGTAGCAGCCAACGCACAGTAT...TAACTCTGGCTGAAAGGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTGAATCTTCTACCATCCCAATTCTGCTGCAGGCTATaGGCCACATTTGCAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: GTKLQERPRAGLNLLPSQFCCRL*ATFAAT Trigger: TGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAA...TTGGGATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTTCTGCTGCAGGCTATaGGCCACATTTGCAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: RGSMRSHTMKLRGLRLVFFCCRL*ATFAAT Trigger: TGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAA...GAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGAAAGAACAAGAAGAGACACAGGGGGCCTTTAGTTCTGCCACCAGAACTAACCGGGCTCCTCCCTaGACACCCAAGTCCCTAACT | + |
|
Preference number: 2 (lower is better) Translates to: MQKEQEETQGAFSSATRTNRAPP*TPKSLT Trigger: AGTTAGGGACTTGGGTGTTCAGGGAGGAGCCCGGTT...AGTTCTGGTGGCAGAACTAAAGGCCCCCTGTGTCTCTTCTTGTTCTTTCTGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGATCATTTCTCTCTGCCTTTTATTTGCCGTTCCTGGTACCATCCTCCCCAACCTTCACGGCGCCTaGAGAAGTTGCTTCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TQIISLCLLFAVPGTILPNLHGA*RSCFLL Trigger: CAGCAGGAAGCAACTTCTTCAGGCGCCGTGAAGGTT...GGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTTTGAATCTTCTACCATCCCAATCTCGAGTCAAGTGGTTGGTCACCACCACACAGAGACACACCTaGGTTTTGCCGCTACCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: AGLNLLPSQSRVKWLVTTTQRHT*VLPLPG Trigger: CCCAGGTAGCGGCAAAACCCAGGTGTGTCTCTGTGT...GGTGGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGATTCAAACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTAATTCTGGGCTCTGCTCCTCAGTCCCCAATGTCCCAATGTCTATCATCTACACAGAGACACACCTaGGTTTTGCCGCTACCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QVILGSAPQSPMSQCLSSTQRHT*VLPLPG Trigger: CCCAGGTAGCGGCAAAACCCAGGTGTGTCTCTGTGT...AGATGATAGACATTGGGACATTGGGGACTGAGGAGCAGAGCCCAGAATTACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | GGACACTATTCATGCAGGTACTACTGTGTTTCTTCAGTGAGGCCTCAAGCTAGGGGAGAATCCGGGTACTaGGCACAAAGCTCCAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: GHYSCRYYCVSSVRPQARGESGY*AQSSRS Trigger: GCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCC...CCTAGCTTGAGGCCTCACTGAAGAAACACAGTAGTACCTGCATGAATAGTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | GGACGCCGTCATTCCTCCATTGGAATCCACATACAGTACATTCTGCTGCAGGCTGGTTTTGCCGCTACCTaGGCCACCCACAATTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GRRHSSIGIHIQYILLQAGFAAT*ATHNFS Trigger: ACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACC...AGCCTGCAGCAGAATGTACTGTATGTGGATTCCAATGGAGGAATGACGGCGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | TTATGTGGGACCCAGGGATTGAACTCGGATTGTCTGGCTTGGTGGCAAGCATCTAAGTGTCTGGTTCACTaGGAGCAGGTCATAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LCGTQGLNSDCLAWWQASKCLVH*EQVIAF Trigger: GAAGGCTATGACCTGCTCTCAGTGAACCAGACACTT...AGATGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCCAGGAGCGTCCAAGGGCAGGTTTGAATCTTCTACCATCCCAATCTCGACCGGAAGATGTCAAATaGACGCACCACCTGTATCCT | + |
|
Preference number: 2 (lower is better) Translates to: KLQERPRAGLNLLPSQSRPEDVK*THHLYP Trigger: AGGATACAGGTGGTGCGTTCATTTGACATCTTCCGG...TCGAGATTGGGATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCGGATTGTCTGGCTTGGTGGCAAGCATCTTCACTGGCTGAGCCATCTCACTCCCAAGTCCCTAACTTaGAGTGGTTCCTTGCAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: TRIVWLGGKHLHWLSHLTPKSLT*SGSLQN Trigger: GTTTTGCAAGGAACCACTGCAAGTTAGGGACTTGGG...AGTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGTGACATCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCACCGTCATTCCTCCATTaGAATCCACATACAGTACAT | + |
|
Preference number: 2 (lower is better) Translates to: SVTSRRIRVLGTKLQERPPSFLH*NPHTVH Trigger: ATGTACTGTATGTGGATTCCAATGGAGGAATGACGG...TGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGATGTCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| 3UTR CAA 90 bp | TTTGCAAGTCTCTCTTCTCTCTTCCCATTATGTGGGACCCAGGGATaGAACTCGGATTGTCTGGCTTGGTGGCAAGCATCTTCACTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FASLSSLFPLCGTQG*NSDCLAWWQASSLA Trigger: AGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAATGGGAAGAGAGAAGAGAGACTTGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAATTCTCCTGTGTCTGTTTATGGGTTAGGCTATGGTTCAGCACCTCTGGTTAGCATCTTCACTGGCTaGGCCATCTCACTGGCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: ANSPVSVYGLGYGSAPLVSIFTG*AISLAL Trigger: TAGGGCCAGTGAGATGGCTCAGCCAGTGAAGATGCT...AACCAGAGGTGCTGAACCATAGCCTAACCCATAAACAGACACAGGAGAATTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCAGATCATTTCTCTCTGCCTTTTATTTGCCGTTCCTGGTACCATCCTCCCCAGTGTCACGTCTGCTTaGCAGGTAATTCTGGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TQIISLCLLFAVPGTILPSVTSA*QVILGS Trigger: AGAGCCCAGAATTACCTGGCAAGCAGACGTGACACT...GGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCCCCTTTGTCATTCATCTCCATCCTTCAGGCCTATGCCTATCCCTGCTATTCTCTTCCCATTATGTaGGACCCAGGGATTGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: PAPLSFISILQAYAYPCYSLPIM*DPGIEL Trigger: GAGTTCAATCCCTGGGTCCCACATAATGGGAAGAGA...ATAGCAGGGATAGGCATAGGCCTGAAGGATGGAGATGAATGACAAAGGGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | CGTGCAAACACCCCCTGCCCCTTTGTCATTCATCTCCATCCTTCAGGCCTATGCTGGCTCTATTTACTGTaGAAATTCTCCTGTGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RANTPCPFVIHLHPSGLCWLYLL*KFSCVC Trigger: ACAGACACAGGAGAATTTGCACAGTAAATAGAGCCA...GCATAGGCCTGAAGGATGGAGATGAATGACAAAGGGGCAGGGGGTGTTTGCACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCAGAAAGAACAAGAAGAGACACAGGGGGCCTTTAGTTCTGCCACCAGAACTCAACAGTGTCACGTCTaGTTGCCAGGTAATTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: MQKEQEETQGAFSSATRTQQCHV*LPGNSG Trigger: CCCAGAATTACCTGGCAAGCAGACGTGACACTGTTG...AGTTCTGGTGGCAGAACTAAAGGCCCCCTGTGTCTCTTCTTGTTCTTTCTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTATGTGGGACCCAGGGATTGAACTCGGATTGTCTGGCTTGGTGGCAAGCATATGAAACAAGTGTCTaGTTCACTGAGAGCAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PLCGTQGLNSDCLAWWQAYETSV*FTESRS Trigger: TGACCTGCTCTCAGTGAACCAGACACTTGTTTCATA...TGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAGAAAGAACAAGAAGAGACACAGGGGGCCTTTAGTTCTGCCACCAGAACTGAGACTGATGTCTCCTaGGGTCTTCTGTGGAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: MQKEQEETQGAFSSATRTETDVS*GLLWKT Trigger: TGTCTTCCACAGAAGACCCCAGGAGACATCAGTCTC...AGTTCTGGTGGCAGAACTAAAGGCCCCCTGTGTCTCTTCTTGTTCTTTCTGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCCCCTTTGTCATTCATCTCCATCCTTCAGGCCTATGCCTATCCCTGCTATCCAGGACACTATTCATaGAGGTACTACTGTGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PAPLSFISILQAYAYPCYPGHYS*RYYCVS Trigger: AGAAACACAGTAGTACCTGCATGAATAGTGTCCTGG...ATAGCAGGGATAGGCATAGGCCTGAAGGATGGAGATGAATGACAAAGGGGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCAGATCATTTCTCTCTGCCTTTTATTTGCCGTTCCTGGTACCATCCTCCCCAGCCAGAGGACCATTTaGAAGTCTCTCTTCTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TQIISLCLLFAVPGTILPSQRTI*KSLFSL Trigger: AAGAGAGAAGAGAGACTTGCAAATGGTCCTCTGGCT...GGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACACTATTCATGCAGGTACTACTGTGTTTCTTCAGTGAGGCCTCAAGCTAGGGGTAAATTATATCCCTaGGACAGCAGCGAGCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GHYSCRYYCVSSVRPQARGKLYP*DSSELC Trigger: ACACAGCTCGCTGCTGTCCCAGGGATATAATTTACC...CCTAGCTTGAGGCCTCACTGAAGAAACACAGTAGTACCTGCATGAATAGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCACAAATGCAGAAAGAACAAGAAGAGACACAGGGGGCCTTTAGTTCTGCCTGTGCATCTCAGTGGTaGAAGCTATGGTTAGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: LSQMQKEQEETQGAFSSACASQW*KLWLAH Trigger: GTGTGCTAACCATAGCTTCCACCACTGAGATGCACA...GGCAGAACTAAAGGCCCCCTGTGTCTCTTCTTGTTCTTTCTGCATTTGTGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CAA 90 bp | ACTGTGGTCCATAAACAACCCAGATCATTTCTCTCTGCCTTTTATTaGCCGTTCCTGGTACCATCCTCCCCTTTCAGCCAGAGTTATGAC | + |
|
Preference number: 2 (lower is better) Translates to: TVVHKQPRSFLSAFY*PFLVPSSPFSQSYD Trigger: GTCATAACTCTGGCTGAAAGGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTGGGTTGTTTATGGACCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACACTATTCATGCAGGTACTACTGTGTTTCTTCAGTGAGGCCTCAAGCTAGGTCCTGTGTCTGTTTATaGGTTAGGCTATGGTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GHYSCRYYCVSSVRPQARSCVCL*VRLWFS Trigger: GCTGAACCATAGCCTAACCCATAAACAGACACAGGA...CCTAGCTTGAGGCCTCACTGAAGAAACACAGTAGTACCTGCATGAATAGTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATTCTCCTGTGTCTGTTTATGGGTTAGGCTATGGTTCAGCACCTCTGGTTTCTCTTCCCATTATGTaGGACCCAGGGATTGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: ANSPVSVYGLGYGSAPLVSLPIM*DPGIEL Trigger: GAGTTCAATCCCTGGGTCCCACATAATGGGAAGAGA...AACCAGAGGTGCTGAACCATAGCCTAACCCATAAACAGACACAGGAGAATTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAATACAGTGCTGTTCTCACTCACATATGAAGCACTTGAAATCACAACGGGCAAAGTGTCTGGTTCACTaGGAGCAGGTCATAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LIQCCSHSHMKHLKSQRAKCLVH*EQVIAF Trigger: GAAGGCTATGACCTGCTCTCAGTGAACCAGACACTT...TGCCCGTTGTGATTTCAAGTGCTTCATATGTGAGTGAGAACAGCACTGTATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAATTCTCCTGTGTCTGTTTATGGGTTAGGCTATGGTTCAGCACCTCTGGTTTTATGGGTTAGGCTATaGTTCAGCACCTCTGGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: ANSPVSVYGLGYGSAPLVLWVRL*FSTSGY Trigger: GTAACCAGAGGTGCTGAACCATAGCCTAACCCATAA...AACCAGAGGTGCTGAACCATAGCCTAACCCATAAACAGACACAGGAGAATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCACAAATGCAGAAAGAACAAGAAGAGACACAGGGGGCCTTTAGTTCTGCCCAGATCATTTCTCTCTaGCTTTTATTTGCCGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LSQMQKEQEETQGAFSSAQIISL*LLFAVP Trigger: AGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTG...GGCAGAACTAAAGGCCCCCTGTGTCTCTTCTTGTTCTTTCTGCATTTGTGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCTTCCTGTAAAAACTGTGGTCCATAAACAACCCAGATCATTTCTCTCTGCCGTTATGACTCTCAGATaGATGGCCACAGTGTTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: DLPVKTVVHKQPRSFLSAVMTLR*MATVLV Trigger: TACCAACACTGTGGCCATCCATCTGAGAGTCATAAC...GGCAGAGAGAAATGATCTGGGTTGTTTATGGACCACAGTTTTTACAGGAAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCACAAATGCAGAAAGAACAAGAAGAGACACAGGGGGCCTTTAGTTCTGCCACAAGCTCTCACAAATaGAGAAAGAACAAGAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSQMQKEQEETQGAFSSATSSHK*RKNKKR Trigger: TCTCTTCTTGTTCTTTCTGCATTTGTGAGAGCTTGT...GGCAGAACTAAAGGCCCCCTGTGTCTCTTCTTGTTCTTTCTGCATTTGTGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAATTATACAACGGGCTCTCTAACCAAGCATGACCTTCCTGTAAAAACTGTGTCCTGTGTCTGTTTATaGGTTAGGCTATGGTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SNYTTGSLTKHDLPVKTVSCVCL*VRLWFS Trigger: GCTGAACCATAGCCTAACCCATAAACAGACACAGGA...CACAGTTTTTACAGGAAGGTCATGCTTGGTTAGAGAGCCCGTTGTATAATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACACTATTCATGCAGGTACTACTGTGTTTCTTCAGTGAGGCCTCAAGCTAGGATCAATTTTCCCAGCTaGCTCTATTTACTGTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GHYSCRYYCVSSVRPQARINFPS*LYLLCK Trigger: TTTGCACAGTAAATAGAGCCAGCTGGGAAAATTGAT...CCTAGCTTGAGGCCTCACTGAAGAAACACAGTAGTACCTGCATGAATAGTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR GCA 90 bp | AGATTTGCCATGTATTATTTACGCCGGCATCAATTTTCCCAGCTGGCTCTATTTTGCAGACTGAGAAACTaGCATCTTGCAGATGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RFAMYYLRRHQFSQLALFCRLRN*HLADGK Trigger: TTTCCCATCTGCAAGATGGCAGTTTCTCAGTCTGCA...AAATAGAGCCAGCTGGGAAAATTGATGCCGGCGTAAATAATACATGGCAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CAA 90 bp | TGCATAAAGAGGTTGACATTTCTGAGGTTGTTTCTACTGAATAACTaGCAGACTGAGAAACTGCCATCTTGCAGATGGGAAAACAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: CIKRLTFLRLFLLNN*QTEKLPSCRWENRP Trigger: TGGTCTGTTTTCCCATCTGCAAGATGGCAGTTTCTCAGTCTGCAAGTTATTCAGTAGAAACAACCTCAGAAATGTCAACCTCTTTATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAATACAGTGCTGTTCTCACTCACATATGAAGCACTTGAAATCACAACGGGCACTCAGAGGGCCTCCTTaGTTATATATATTTAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LIQCCSHSHMKHLKSQRALRGPP*LYIFKS Trigger: ACTCTTAAATATATATAACCAAGGAGGCCCTCTGAG...TGCCCGTTGTGATTTCAAGTGCTTCATATGTGAGTGAGAACAGCACTGTATTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | CCCGCCCAGGGGAGAGCCGGCAACCGGGCTCCTCCCTaGACACCCAAGTCCCTAACTTGCAGTGGTTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PAQGRAGNRAPP*TPKSLTCSGSL Trigger: CAAGGAACCACTGCAAGTTAGGGACTTGGGTGTTCAGGGAGGAGCCCGGTTGCCGGCTCTCCCCTGGGCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCCTTCCCTCTGCTGACCTCCCAGAAGTGGGGCGACCACTGCAGTGACCGAAGACACACCTGGGTTTaGCCGCTACCTGGGCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: QAFPLLTSQKWGDHCSDRRHTWV*PLPGPP Trigger: GGGTGGCCCAGGTAGCGGCAAAACCCAGGTGTGTCT...TCGGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | CAAGGCCAGGCCTTCCCTCTGCTGACCTCCCAGAAGTaGGGCGACCACTGCAGTGACCGAGTCCACAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: QGQAFPLLTSQK*GDHCSDRVHNH Trigger: GTGATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGCCTGGCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | TCTGCTGACCTCCCAGAAGTGGGGCGACCACTGCAGTaGCCGAGTCCACAATCACAACCTTCACGGCGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SADLPEVGRPLQ*PSPQSQPSRRL Trigger: CAGGCGCCGTGAAGGTTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | TGCGTTGGCTGCTACCGAGTGTCCCAGCCCCCTCAGTaGCATCCAGGAGAATCCGGGTACTGGGCACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: CVGCYRVSQPPQ*HPGESGYWAQS Trigger: GCTTTGTGCCCAGTACCCGGATTCTCCTGGATGTCACTGAGGGGGCTGGGACACTCGGTAGCAGCCAACGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | GATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTaGCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DEPETSALLGPM*QGTVAAREGKL Trigger: CAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | TTCCCTCTGCTGACCTCCCAGAAGTGGGGCGACCACTaGAGTGACCGAGTCCACAATCACAACCTTCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: FPLLTSQKWGDH*SDRVHNHNLHG Trigger: GCCGTGAAGGTTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTGAATCTTCGGCGCCTGAAGAAGTaGCTTCCTGCTGGGCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: IRVLGTKLQERPRAGLNLRRLKK*LPAGLW Trigger: CCATAGCCCAGCAGGAAGCAACTTCTTCAGGCGCCG...AAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | AGTGACCGAGTCCACAATCACAACCTTCACGGCGCCTaGAGAAGTTGCTTCCTGCTGGGCTATGGTGCCGCG | + |
|
Preference number: 3 (lower is better) Translates to: SDRVHNHNLHGA*RSCFLLGYGAA Trigger: CGCGGCACCATAGCCCAGCAGGAAGCAACTTCTTCAGGCGCCGTGAAGGTTGTGATTGTGGACTCGGTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | ACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCTTaGGGCTGTCCCTTTCCCAATCAACAGTGTCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: TVAAREGKLWGP*GCPFPNQQCHV Trigger: GACGTGACACTGTTGATTGGGAAAGGGACAGCCTCAAGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | CGGCGCCTGAAGAAGTTGCTTCCTGCTGGGCTATGGTaGCGCGAAGGTCCTGTAGCATATCTAGCATCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: RRLKKLLPAGLW*REGPVAYLASG Trigger: TCCGGATGCTAGATATGCTACAGGACCTTCGCGGCACCATAGCCCAGCAGGAAGCAACTTCTTCAGGCGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | TCCTCAGTCCCCAATGTCCCAATGTCTATCATCTCCTaGAGACCCGTTGGCTGGCGGGGAGACTTGGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSVPNVPMSIIS*RPVGWRGDLVR Trigger: TCTGACCAAGTCTCCCCGCCAGCCAACGGGTCTGCAGGAGATGATAGACATTGGGACATTGGGGACTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | GGGACCCAGGGATTGAACTCGGATTGTCTGGCTTGGTaGCAAGCATCTTCACTGGCTGAGCCATCTCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GTQGLNSDCLAW*QASSLAEPSHW Trigger: CCAGTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | GTCCCAATGTCTATCATCTCCTGCAGACCCGTTGGCTaGCGGGGAGACTTGGTCAGACATACTGTGCGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VPMSIISCRPVG*RGDLVRHTVRW Trigger: CCAACGCACAGTATGTCTGACCAAGTCTCCCCGCCAGCCAACGGGTCTGCAGGAGATGATAGACATTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATCTCAGTGGTGGAAGCTATGGTTAGCACACACAAGGTCCTGGATTCGAGTCCGGCGCCTGAAGAAGTaGCTTCCTGCTGGGCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: ASQWWKLWLAHTRSWIRVRRLKK*LPAGLW Trigger: CCATAGCCCAGCAGGAAGCAACTTCTTCAGGCGCCG...GACTCGAATCCAGGACCTTGTGTGTGCTAACCATAGCTTCCACCACTGAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | GCTGTCCCTTTCCCAATCAACAGTGTCACGTCTGCTTaGCAGGTAATTCTGGGCTCTGCTCCTCAGTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AVPFPINSVTSA*QVILGSAPQSP Trigger: TGGGGACTGAGGAGCAGAGCCCAGAATTACCTGGCAAGCAGACGTGACACTGTTGATTGGGAAAGGGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | TGTGGGACCCAGGGATTGAACTCGGATTGTCTGGCTTaGTGGCAAGCATCTTCACTGGCTGAGCCATCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CGTQGLNSDCLA*WQASSLAEPSH Trigger: GTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | ATCCTCTGGAGAGCACTTGCCTGTTTCTCCTCATCTTaGGTTCTAGCCTGTAGTAGCTGGAGGAGGCGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: ILWRALACFSSS*VLACSSWRRRD Trigger: GTCCCGCCTCCTCCAGCTACTACAGGCTAGAACCCAAGATGAGGAGAAACAGGCAAGTGCTCTCCAGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | GGTTTGAATCTTCTACCATCCCAATCTCGAGTCAAGTaGTTGGTCACCACCACTGCCACACCCAGGTCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: GLNLLPSQSRVK*LVTTTATPRSR Trigger: CCGGGACCTGGGTGTGGCAGTGGTGGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGATTCAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | CAATGTCCCAATGTCTATCATCTCCTGCAGACCCGTTaGCTGGCGGGGAGACTTGGTCAGACATACTGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: QCPNVYHLLQTR*LAGRLGQTYCA Trigger: CGCACAGTATGTCTGACCAAGTCTCCCCGCCAGCCAACGGGTCTGCAGGAGATGATAGACATTGGGACATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | AGCCACACAGAGACACACCTGGGTTTTGCCGCTACCTaGGCCACCCACAATTTCAGTCACCTCCCCAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: SHTETHLGFAAT*ATHNFSHLPSI Trigger: TATACTGGGGAGGTGACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACCCAGGTGTGTCTCTGTGTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | GTGTTCTCACCTATCAGGGTGAGGTATGCAGGTGTGTaGAACCCAGTCAGCAAGCAGGGAAGGAGGCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: VFSPIRVRYAGV*NPVSKQGRRHS Trigger: AGAGTGCCTCCTTCCCTGCTTGCTGACTGGGTTTCACACACCTGCATACCTCACCCTGATAGGTGAGAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | TGGGTTGCAGGAAGTAACCTGCCAACCAACCAGCCATaGTGTAGATACCAGAGACTGATGTCTCCTGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: WVAGSNLPTNQP*CRYQRLMSPGV Trigger: GACCCCAGGAGACATCAGTCTCTGGTATCTACACCATGGCTGGTTGGTTGGCAGGTTACTTCCTGCAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | GTAGCTGGAGGAGGCGGGACGCCGTCATTCCTCCATTaGAATCCACATACAGTACATTCTGCTGCAGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: VAGGGGTPSFLH*NPHTVHSAAGY Trigger: ATAGCCTGCAGCAGAATGTACTGTATGTGGATTCCAATGGAGGAATGACGGCGTCCCGCCTCCTCCAGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | TGTTTCTCCTCATCTTGGGTTCTAGCCTGTAGTAGCTaGAGGAGGCGGGACGCCGTCATTCCTCCATTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CFSSSWVLACSS*RRRDAVIPPLE Trigger: TTCCAATGGAGGAATGACGGCGTCCCGCCTCCTCCAGCTACTACAGGCTAGAACCCAAGATGAGGAGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACGCCGGCATCAATTTTCCCAGCTGGCTCTATTTACTGTGCAAATTCTCCTGAGACACACCTGGGTTTaGCCGCTACCTGGGCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LRRHQFSQLALFTVQILLRHTWV*PLPGPP Trigger: GGGTGGCCCAGGTAGCGGCAAAACCCAGGTGTGTCT...CAGGAGAATTTGCACAGTAAATAGAGCCAGCTGGGAAAATTGATGCCGGCGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | TGCCAACCAACCAGCCATGGTGTAGATACCAGAGACTaGTGTCTCCTGGGGTCTTCTGTGGAAGACAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CQPTSHGVDTRD*CLLGSSVEDSV Trigger: CACACTGTCTTCCACAGAAGACCCCAGGAGACATCAGTCTCTGGTATCTACACCATGGCTGGTTGGTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | CAGGGGCTGGGGGTGTGGGAGACAATCCAGGCCAAATaGTCCTTATGGGTCTCTAATACAGTGCTGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QGLGVWETIQAK*SLWVSNTVLFS Trigger: TGAGAACAGCACTGTATTAGAGACCCATAAGGATCATTTGGCCTGGATTGTCTCCCACACCCCCAGCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | TGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTaGATCTTCTACCATCCCAATCTCGAGTCAAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: WAQSSRSVQGQV*IFYHPNLESSG Trigger: ACCACTTGACTCGAGATTGGGATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | ATACAGTACATTCTGCTGCAGGCTATGGGCCACATTTaGAGCCACACAGAGACACACCTGGGTTTTGCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: IQYILLQAMGHI*SHTETHLGFAA Trigger: AGCGGCAAAACCCAGGTGTGTCTCTGTGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAATGTACTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | CAGTGTCACGTCTGCTTGCCAGGTAATTCTGGGCTCTaGTCCTCAGTCCCCAATGTCCCAATGTCTATCATC | + |
|
Preference number: 3 (lower is better) Translates to: QCHVCLPGNSGL*SSVPNVPMSII Trigger: GATGATAGACATTGGGACATTGGGGACTGAGGAGCAGAGCCCAGAATTACCTGGCAAGCAGACGTGACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | CAGGTCATAGCCTTCCTCCCTGGTAAATTATATCCCTaGGACAGCAGCGAGCTGTGTTCTCACCTATCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QVIAFLPGKLYP*DSSELCSHLSG Trigger: CCCTGATAGGTGAGAACACAGCTCGCTGCTGTCCCAGGGATATAATTTACCAGGGAGGAAGGCTATGACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | ATGGGAGCTGGCTGTGCATCTCAGTGGTGGAAGCTATaGTTAGCACACACAAGGTCCTGGATTCGAGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: MGAGCASQWWKL*LAHTRSWIRVI Trigger: GATGACTCGAATCCAGGACCTTGTGTGTGCTAACCATAGCTTCCACCACTGAGATGCACAGCCAGCTCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTAATTCTGGGCTCTGCTCCTCAGTCCCCAATGTCCCAATGTCTATCATCTGGCTATGGGCCACATTaGCAGCCACACAGAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: QVILGSAPQSPMSQCLSSGYGPH*QPHRDT Trigger: TGTGTCTCTGTGTGGCTGCAAATGTGGCCCATAGCC...AGATGATAGACATTGGGACATTGGGGACTGAGGAGCAGAGCCCAGAATTACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | CATCCTCCCCTTTCAGCCAGAGTTATGACTCTCAGATaGATGGCCACAGTGTTGGTAACAGACAGGGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: HPPLSARVMTLR*MATVLVTDRGL Trigger: TAACCCCCTGTCTGTTACCAACACTGTGGCCATCCATCTGAGAGTCATAACTCTGGCTGAAAGGGGAGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | ACTCGGATTGTCTGGCTTGGTGGCAAGCATCTTCACTaGCTGAGCCATCTCACTGGCCCTAAATATCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: TRIVWLGGKHLH*LSHLTGPKYQI Trigger: GATCTGATATTTAGGGCCAGTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | TTGGAATCCACATACAGTACATTCTGCTGCAGGCTATaGGCCACATTTGCAGCCACACAGAGACACACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LESTYSTFCCRL*ATFAATQRHTW Trigger: CCAGGTGTGTCTCTGTGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAATGTACTGTATGTGGATTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | TTAGGCTATGGTTCAGCACCTCTGGTTACTCTAGACTaGGGAAGCACCCCACAGGCCACCATGCATATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGYGSAPLVTLD*GSTPQATMHMK Trigger: TTTCATATGCATGGTGGCCTGTGGGGTGCTTCCTCAGTCTAGAGTAACCAGAGGTGCTGAACCATAGCCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | GGATTGTCTGGCTTGGTGGCAAGCATCTTCACTGGCTaGGCCATCTCACTGGCCCTAAATATCAGATCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: GLSGLVASIFTG*AISLALNIRSY Trigger: ATAGGATCTGATATTTAGGGCCAGTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | TCTCTTCTCTCTTCCCATTATGTGGGACCCAGGGATTaGACTCGGATTGTCTGGCTTGGTGGCAAGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLLSSHYVGPRD*TRIVWLGGKHL Trigger: AAGATGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAATGGGAAGAGAGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | TGCCCCTTTGTCATTCATCTCCATCCTTCAGGCCTATaGCTATCCCTGCTATGCCTATCACCTGTAAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CPFVIHLHPSGL*LSLLCLSPVKV Trigger: GACCTTTACAGGTGATAGGCATAGCAGGGATAGGCATAGGCCTGAAGGATGGAGATGAATGACAAAGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | AAGTCTAACCACATTGTCGTTCGTGCAAACACCCCCTaGCCCTTTGTCATTCATCTCCATCCTTCAGGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: KSNHIVVRANTP*PFVIHLHPSGL Trigger: TAGGCCTGAAGGATGGAGATGAATGACAAAGGGGCAGGGGGTGTTTGCACGAACGACAATGTGGTTAGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | GTCATTCCTCCATTGGAATCCACATACAGTACATTCTaGTGCAGGCTATGGGCCACATTTGCAGCCACACAG | + |
|
Preference number: 3 (lower is better) Translates to: VIPPLESTYSTF*CRLWATFAATQ Trigger: CTGTGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAATGTACTGTATGTGGATTCCAATGGAGGAATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | ACTGTGAAACATTCCATGAGAGTGCCCTTGACTAACTaGTACCATCTGCTAAGGTCTCGATGGCCAAAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: TVKHSMRVPLTN*YHLLRSRWPKR Trigger: GCGCTTTGGCCATCGAGACCTTAGCAGATGGTACCAGTTAGTCAAGGGCACTCTCATGGAATGTTTCACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | CGGAAGATGTCAAATGAACGCACCACCTGTATCCTCTaGAGAGCACTTGCCTGTTTCTCCTCATCTTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RKMSNERTTCIL*RALACFSSSWV Trigger: AACCCAAGATGAGGAGAAACAGGCAAGTGCTCTCCAGAGGATACAGGTGGTGCGTTCATTTGACATCTTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | GGTAACAGACAGGGGGTTATTTTATTCACTAAGACATaGGGCTGTGGTACAGCTGGCAGGACGAGAGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GNRQGVILFTKT*GCGTAGRTRGV Trigger: TACACCTCTCGTCCTGCCAGCTGTACCACAGCCTCATGTCTTAGTGAATAAAATAACCCCCTGTCTGTTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | ATTCCTCCATTGGAATCCACATACAGTACATTCTGCTaGAGGCTATGGGCCACATTTGCAGCCACACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: IPPLESTYSTFC*RLWATFAATQR Trigger: TCTCTGTGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAATGTACTGTATGTGGATTCCAATGGAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAGAAAGAACAAGAAGAGACACAGGGGGCCTTTAGTTCTGCCACCAGAACTAAGCCAGAGGACCATTaGCAAGTCTCTCTTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: MQKEQEETQGAFSSATRTKPEDH*QVSLLS Trigger: AGAGAGAAGAGAGACTTGCAAATGGTCCTCTGGCTT...AGTTCTGGTGGCAGAACTAAAGGCCCCCTGTGTCTCTTCTTGTTCTTTCTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | ACTGATGTCTCCTGGGGTCTTCTGTGGAAGACAGTGTaGGAGTTTAAGTCTAACCACATTGTCGTTCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TDVSWGLLWKTV*EFKSNHIVVRA Trigger: TGCACGAACGACAATGTGGTTAGACTTAAACTCTCACACTGTCTTCCACAGAAGACCCCAGGAGACATCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | ATAGTCCACAGGATGTATGGAAGCCAGAGGACCATTTaGAAGTCTCTCTTCTCTCTTCCCATTATGTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IVHRMYGSQRTI*KSLFSLPIMWD Trigger: GTCCCACATAATGGGAAGAGAGAAGAGAGACTTGCAAATGGTCCTCTGGCTTCCATACATCCTGTGGACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | ATATATTGCTTCTCACTTGGGTTGCAGGAAGTAACCTaGCAACCAACCAGCCATGGTGTAGATACCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IYCFSLGLQEVT*QPTSHGVDTRD Trigger: GTCTCTGGTATCTACACCATGGCTGGTTGGTTGGCAGGTTACTTCCTGCAACCCAAGTGAGAAGCAATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | CTCGATGGCCAAAGCGCATCAAGAGTGGCCGGTATTTaGTTTGCCTGGTTTAATATATTGCTTCTCACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LDGQSASRVAGI*FAWFNILLLTW Trigger: CCAAGTGAGAAGCAATATATTAAACCAGGCAAAGCAAATACCGGCCACTCTTGATGCGCTTTGGCCATCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | CCAGATCATTTCTCTCTGCCTTTTATTTGCCGTTCCTaGTACCATCCTCCCCTTTCAGCCAGAGTTATGACT | + |
|
Preference number: 3 (lower is better) Translates to: PDHFSLPFICRS*YHPPLSARVMT Trigger: AGTCATAACTCTGGCTGAAAGGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAATACAGTGCTGTTCTCACTCACATATGAAGCACTTGAAATCACAACGGGCATGCTTCTCACTTGGGTaGCAGGAAGTAACCTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LIQCCSHSHMKHLKSQRACFSLG*QEVTCQ Trigger: TTGGCAGGTTACTTCCTGCAACCCAAGTGAGAAGCA...TGCCCGTTGTGATTTCAAGTGCTTCATATGTGAGTGAGAACAGCACTGTATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR GCA 72 bp | ATAAACAACCCAGATCATTTCTCTCTGCCTTTTATTTaGCGTTCCTGGTACCATCCTCCCCTTTCAGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: INNPDHFSLPFI*RSWYHPPLSAR Trigger: TCTGGCTGAAAGGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTGGGTTGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | ATTTGCTTTGCCTGGTTTAATATATTGCTTCTCACTTaGGTTGCAGGAAGTAACCTGCCAACCAACCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ICFAWFNILLLT*VAGSNLPTNQP Trigger: TGGCTGGTTGGTTGGCAGGTTACTTCCTGCAACCCAAGTGAGAAGCAATATATTAAACCAGGCAAAGCAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR TCA 72 bp | TCACATTTAAAGGCTTGGTTCTTTCTCTTAACAATATaGGATGGGAGCTGGCTGTGCATCTCAGTGGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SHLKAWFFLLTI*DGSWLCISVVE Trigger: TTCCACCACTGAGATGCACAGCCAGCTCCCATCTCATATTGTTAAGAGAAAGAACCAAGCCTTTAAATGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | CCATGTATTATTTACGCCGGCATCAATTTTCCCAGCTaGCTCTATTTACTGTGCAAATTCTCCTGTGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PCIIYAGINFPS*LYLLCKFSCVC Trigger: ACAGACACAGGAGAATTTGCACAGTAAATAGAGCCAGCTGGGAAAATTGATGCCGGCGTAAATAATACATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CCA 72 bp | TTTAAAGGCTTGGTTCTTTCTCTTAACAATATGAGATaGGAGCTGGCTGTGCATCTCAGTGGTGGAAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FKGLVLSLNNMR*ELAVHLSGGSY Trigger: ATAGCTTCCACCACTGAGATGCACAGCCAGCTCCCATCTCATATTGTTAAGAGAAAGAACCAAGCCTTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCTTGAGGCTGTCCTCCCAGCCCCCTCAGTaGCATCCAGGAGAATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGDSSCPGRKAVGALRLSSQPPQ*HPGESG Trigger: CCCGGATTCTCCTGGATGTCACTGAGGGGGCTGGGA...GGACAGCCTCAAGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCTTGAGGCTGTCCCTAGCCTGTAGTAGCTaGAGGAGGCGGGACGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AGDSSCPGRKAVGALRLSLACSS*RRRDAV Trigger: GACGGCGTCCCGCCTCCTCCAGCTACTACAGGCTAG...GGACAGCCTCAAGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
||
| CDS-3UTR TCA 90 bp | CTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGGACGGTCTCCTCGGTaGGGCCCGGGCACAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTAASPGQGLHEISHNEAGRSPR*GPGTAL Trigger: CAGGGCTGTGCCCGGGCCTCACCGAGGAGACCGTCC...AGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGGACGGTCTCCTCGGTaGGGCCCGGGCACAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSDEPETSALLGPMWQGTGRSPR*GPGTAL Trigger: CAGGGCTGTGCCCGGGCCTCACCGAGGAGACCGTCC...TGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | ACTCGGATTGTCTGGCTTGGTGGCAAGCATCTTCACTGGCTGAGCCATCTCACTGGACGGTCTCCTCGGTaGGGCCCGGGCACAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRIVWLGGKHLHWLSHLTGRSPR*GPGTAL Trigger: CAGGGCTGTGCCCGGGCCTCACCGAGGAGACCGTCC...AGTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACACCCGGGCCAGGATCTTaGGCTCTCGGGCCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSDEPETSALLGPMWQGTPGPGS*ALGPAA Trigger: TGCAGCTGGCCCGAGAGCTCAAGATCCTGGCCCGGG...TGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCGTTGGCTGCTACCGAGTGTCCCAGCCCCCTCAGTGACATCCAGGAGAGGCTTCCGATGCCGGTaGACAGGATGGCCGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVRWLLPSVPAPSVTSRRGFRCR*TGWPWK Trigger: CTTCCACGGCCATCCTGTCCACCGGCATCGGAAGCC...TCTCCTGGATGTCACTGAGGGGGCTGGGACACTCGGTAGCAGCCAACGCACAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCTACCGAGTGTCCCAGCCCCCTCAGTGACATCCAGGAGAATCCGGGTACTCTAGCCTGTAGTAGCTaGAGGAGGCGGGACGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AATECPSPLSDIQENPGTLACSS*RRRDAV Trigger: GACGGCGTCCCGCCTCCTCCAGCTACTACAGGCTAG...AGTACCCGGATTCTCCTGGATGTCACTGAGGGGGCTGGGACACTCGGTAGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| 3UTR CAA 72 bp | TGGCTGGCGGGGAGACTTGGTCAGACATACTGTGCGTaGGCTGCTACCGAGTGTCCCAGCCCCCTCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WLAGRLGQTYCA*AATECPSPLSD Trigger: GTCACTGAGGGGGCTGGGACACTCGGTAGCAGCCAACGCACAGTATGTCTGACCAAGTCTCCCCGCCAGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGGGAAAGCCGAGAACTaGGCCAGCAACACCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CTARSHVAGDSSCPGRKAGKAEN*ASNTLL Trigger: GAGGAGGGTGTTGCTGGCGCAGTTCTCGGCTTTCCC...AGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTGCGTTGGCTGCTACCGAGTGTCCCAGCCCCCTCAGTGACATCCAGGAGAGGGAAAGCCGAGAACTaGGCCAGCAACACCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVRWLLPSVPAPSVTSRRGKAEN*ASNTLL Trigger: GAGGAGGGTGTTGCTGGCGCAGTTCTCGGCTTTCCC...TCTCCTGGATGTCACTGAGGGGGCTGGGACACTCGGTAGCAGCCAACGCACAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCTTGAGGCTGTCCTGGTCAGACATACTGTaGGTTGGCTGCTACCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGDSSCPGRKAVGALRLSWSDIL*VGCYRV Trigger: CACTCGGTAGCAGCCAACGCACAGTATGTCTGACCA...GGACAGCCTCAAGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR CCA 90 bp | GATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGCTGGCTTCCGATGCCGGTaGACAGGATGGCCGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DEPETSALLGPMWQGTVAGFRCR*TGWPWK Trigger: CTTCCACGGCCATCCTGTCCACCGGCATCGGAAGCC...AGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR TCA 90 bp | CATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAGCGGACGGTCTCCTCGGTaGGGCCCGGGCACAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HEISHNEAEGTEACLLMSGRSPR*GPGTAL Trigger: CAGGGCTGTGCCCGGGCCTCACCGAGGAGACCGTCC...GCTCATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | CTCCATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGGGACGGTCTCCTCGGTaGGGCCCGGGCACAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHEISHNEAEGTEACLLMGRSPR*GPGTAL Trigger: CAGGGCTGTGCCCGGGCCTCACCGAGGAGACCGTCC...CATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCTTGAGGCTGTCCCCGGAAGATGTCAAATaGACGCACCACCTGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGDSSCPGRKAVGALRLSPEDVK*THHLYP Trigger: AGGATACAGGTGGTGCGTTCATTTGACATCTTCCGG...GGACAGCCTCAAGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACATCCCAGCCCCCTCAGTaGCATCCAGGAGAATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSDEPETSALLGPMWQGTSQPPQ*HPGESG Trigger: CCCGGATTCTCCTGGATGTCACTGAGGGGGCTGGGA...TGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR TCA 90 bp | TGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGGGCGACCACTGCAGTaGCCGAGTCCACAATCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CTARSHVAGDSSCPGRKAGRPLQ*PSPQSQ Trigger: TTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCC...AGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTGACATCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCATCACCTTCCCTCTGCTaGCCTCCCAGAAGTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVTSRRIRVLGTKLQERPSPSLC*PPRSGA Trigger: CGCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGTGA...TGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGATGTCACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGAGCTCTCGGGCCAGCTaGATCATCAAGGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQHPLARGSMRSHTMKLRSSRAS*IIKARP Trigger: AGGCCTGGCCTTGATGATGCAGCTGGCCCGAGAGCT...CCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTCCTCTGGAGAGCACTTaGCTGGGTTTTGCCGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: CTARSHVAGDSSCPGRKAPLEST*LGFAAT Trigger: GGTAGCGGCAAAACCCAGGCAAGTGCTCTCCAGAGG...AGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092844.13 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCTTGAGGCTGTCCGACAAGCCACACTTCTaGGCTACTTCCTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGDSSCPGRKAVGALRLSDKPHF*ATSSKS Trigger: TGACTTGGAGGAAGTAGCCCAGAAGTGTGGCTTGTC...GGACAGCCTCAAGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTAGCCTGTAGTAGCTaGAGGAGGCGGGACGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLQHPLARGSMRSHTMKLACSS*RRRDAV Trigger: GACGGCGTCCCGCCTCCTCCAGCTACTACAGGCTAG...CTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
||
| CDS-3UTR TCA 90 bp | CGTTGGCTGCTACCGAGTGTCCCAGCCCCCTCAGTGACATCCAGGAGAATCCGGTTATCTTTCGGCCTCTaGGAAGCTGGACGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RWLLPSVPAPSVTSRRIRLSFGL*EAGRSP Trigger: AGGAGACCGTCCAGCTTCTCAGAGGCCGAAAGATAA...CCGGATTCTCCTGGATGTCACTGAGGGGGCTGGGACACTCGGTAGCAGCCAACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGGGAAAGCCGAGAACTaGGCCAGCAACACCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDEPETSALLGPMWQGTVGKAEN*ASNTLL Trigger: GAGGAGGGTGTTGCTGGCGCAGTTCTCGGCTTTCCC...TACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR GCA 90 bp | CTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGGGAAAGCCGAGAACTaGGCCAGCAACACCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTAASPGQGLHEISHNEAGKAEN*ASNTLL Trigger: GAGGAGGGTGTTGCTGGCGCAGTTCTCGGCTTTCCC...AGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGACACACCTGGGTTTTaGCGCTACCTGGGCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSDEPETSALLGPMWQGTDTPGF*RYLGHP Trigger: TGGGTGGCCCAGGTAGCGGCAAAACCCAGGTGTGTC...TGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTAAGTGGGGCGACCACTaGAGTGACCGAGTCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRRIRVLGTKLQERPRAGKWGDH*SDRVHN Trigger: ATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTT...ACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAAGCTCTCGGGCCAGCTaGATCATCAAGGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDEPETSALLGPMWQGTVSSRAS*IIKARP Trigger: AGGCCTGGCCTTGATGATGCAGCTGGCCCGAGAGCT...TACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 |
||
| CDS-3UTR CCA 90 bp | GCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGGGTGCCGGTGGACAGGATaGCCGTGGAAGTCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AASPGQGLHEISHNEAEGCRWTG*PWKSSV Trigger: AACTGAAGACTTCCACGGCCATCCTGTCCACCGGCA...CCCCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTATCTTTCGGCCTCTaGGAAGCTGGACGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRRIRVLGTKLQERPRAGLSFGL*EAGRSP Trigger: AGGAGACCGTCCAGCTTCTCAGAGGCCGAAAGATAA...ACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCAGTGACATCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTAACCTTCACGGCGCCTaGAGAAGTTGCTTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSVTSRRIRVLGTKLQERNLHGA*RSCFLL Trigger: CAGCAGGAAGCAACTTCTTCAGGCGCCGTGAAGGTT...ACGCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGATGTCACTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGGGGCGACCACTGCAGTaGCCGAGTCCACAATCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLQHPLARGSMRSHTMGRPLQ*PSPQSQ Trigger: TTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCC...CATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCCTTCCCTCTGCTGACCTCCCAGAAGTGGGGCGACCACTGCAGTGACCGAAGCAGCTGCCAGGTCTaGCACTGTTTTTATCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QAFPLLTSQKWGDHCSDRSSCQV*HCFYLS Trigger: CGAAAGATAAAAACAGTGGCAGACCTGGCAGCTGCT...TCGGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | TCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGATACTGTGCGTTGGCTaGTACCGAGTGTCCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLQHPLARGSMRSHTMKLILCVG*YRVSQP Trigger: GGGCTGGGACACTCGGTAGCAGCCAACGCACAGTAT...CAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGATACTGTGCGTTGGCTaGTACCGAGTGTCCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLQHPLARGSMRSHTMILCVG*YRVSQP Trigger: GGGCTGGGACACTCGGTAGCAGCCAACGCACAGTAT...CATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTTGGTCAGACATACTGTaGGTTGGCTGCTACCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CTARSHVAGDSSCPGRKAWSDIL*VGCYRV Trigger: CACTCGGTAGCAGCCAACGCACAGTATGTCTGACCA...AGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR CCA 90 bp | CGTTGGCTGCTACCGAGTGTCCCAGCCCCCTCAGTGACATCCAGGAGAATCCGGGACAAGCCACACTTCTaGGCTACTTCCTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RWLLPSVPAPSVTSRRIRDKPHF*ATSSKS Trigger: TGACTTGGAGGAAGTAGCCCAGAAGTGTGGCTTGTC...CCGGATTCTCCTGGATGTCACTGAGGGGGCTGGGACACTCGGTAGCAGCCAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGCTTGCCGGTGGACAGGATaGCCGTGGAAGTCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DEPETSALLGPMWQGTVACRWTG*PWKSSV Trigger: AACTGAAGACTTCCACGGCCATCCTGTCCACCGGCA...AGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCAGTGACATCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTTGCCGGTGGACAGGATaGCCGTGGAAGTCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSVTSRRIRVLGTKLQERCRWTG*PWKSSV Trigger: AACTGAAGACTTCCACGGCCATCCTGTCCACCGGCA...ACGCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGATGTCACTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGGGGGTTTTGCCGCTACCTaGGCCACCCACAATTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AASPGQGLHEISHNEAEGGFAAT*ATHNFS Trigger: ACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACC...CCCCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTGGTTTTGCCGCTACCTaGGCCACCCACAATTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRRIRVLGTKLQERPRAGGFAAT*ATHNFS Trigger: ACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACC...ACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTTCACCTGCTGGGCTATaGTGCCGCGAAGGTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTAASPGQGLHEISHNEASPAGL*CREGPV Trigger: TACAGGACCTTCGCGGCACCATAGCCCAGCAGGTGA...AGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021033.16 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGGGAGAATCCGGGTACTaGGCACAAAGCTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLQHPLARGSMRSHTMGESGY*AQSSRS Trigger: GCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCC...CATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR CCA 90 bp | GCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGGGCAATCTCGAGTCAAGTaGTTGGTCACCACCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AASPGQGLHEISHNEAEGQSRVK*LVTTTA Trigger: GGCAGTGGTGGTGACCAACCACTTGACTCGAGATTG...CCCCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 |
||
| CDS-3UTR CCA 90 bp | TCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGTGGAGAGCACTTGCCTaGGTTTTGCCGCTACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQHPLARGSMRSHTMKLWRALA*VLPLPG Trigger: CCCAGGTAGCGGCAAAACCCAGGCAAGTGCTCTCCA...CAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092844.13 |
||
| 3UTR CAA 72 bp | GACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCTaGAGGCTGTCCCTTTCCCAATCAACAGTGTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: DSSCPGRKAVGA*RLSLSQSTVSR Trigger: ACGTGACACTGTTGATTGGGAAAGGGACAGCCTCAAGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | GATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGCTTTATCTTTCGGCCTCTaGGAAGCTGGACGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DEPETSALLGPMWQGTVALSFGL*EAGRSP Trigger: AGGAGACCGTCCAGCTTCTCAGAGGCCGAAAGATAA...AGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCTGCCCCTTTGTCATTCATCTCCATCCTTCAGGCCTATGCCTATCCCTGCAACCTTCACGGCGCCTaGAGAAGTTGCTTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPAPLSFISILQAYAYPCNLHGA*RSCFLL Trigger: CAGCAGGAAGCAACTTCTTCAGGCGCCGTGAAGGTT...GCAGGGATAGGCATAGGCCTGAAGGATGGAGATGAATGACAAAGGGGCAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAAACCTTCACGGCGCCTaGAGAAGTTGCTTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSDEPETSALLGPMWQGTNLHGA*RSCFLL Trigger: CAGCAGGAAGCAACTTCTTCAGGCGCCGTGAAGGTT...TGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR TCA 90 bp | CCAGATCATTTCTCTCTGCCTTTTATTTGCCGTTCCTGGTACCATCCTCCCCTTCCCGGGCCAGGATCTTaGGCTCTCGGGCCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PDHFSLPFICRSWYHPPLPGPGS*ALGPAA Trigger: TGCAGCTGGCCCGAGAGCTCAAGATCCTGGCCCGGG...AAGGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR GCA 90 bp | TCGTTCGTGCAAACACCCCCTGCCCCTTTGTCATTCATCTCCATCCTTCAGGCCATACTGTGCGTTGGCTaGTACCGAGTGTCCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFVQTPPAPLSFISILQAILCVG*YRVSQP Trigger: GGGCTGGGACACTCGGTAGCAGCCAACGCACAGTAT...GGCCTGAAGGATGGAGATGAATGACAAAGGGGCAGGGGGTGTTTGCACGAACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR GCA 90 bp | TCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAATGTCTATCATCTCCTaGAGACCCGTTGGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDEPETSALLGPMWQGTVMSIIS*RPVGWR Trigger: CCGCCAGCCAACGGGTCTGCAGGAGATGATAGACAT...TACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR GCA 90 bp | GATTGTCTGGCTTGGTGGCAAGCATCTTCACTGGCTGAGCCATCTCACTGGCCCAAGTGGGGCGACCACTaGAGTGACCGAGTCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: DCLAWWQASSLAEPSHWPKWGDH*SDRVHN Trigger: ATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTT...GGGCCAGTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR CCA 90 bp | TGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTTGGACAGGATGGCCGTaGAAGTCTTCAGTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTARSHVAGDSSCPGRKAWTGWP*KSSVPH Trigger: ATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCA...AGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGAGAGTGCCCTTGACTAACTGGTACCATCTGCTAAGGTCTCGATGGCCAGGCTTCCGATGCCGGTaGACAGGATGGCCGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SMRVPLTNWYHLLRSRWPGFRCR*TGWPWK Trigger: CTTCCACGGCCATCCTGTCCACCGGCATCGGAAGCC...TGGCCATCGAGACCTTAGCAGATGGTACCAGTTAGTCAAGGGCACTCTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR CCA 90 bp | TCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAACACAGAGACACACCTaGGTTTTGCCGCTACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDEPETSALLGPMWQGTVTQRHT*VLPLPG Trigger: CCCAGGTAGCGGCAAAACCCAGGTGTGTCTCTGTGT...TACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGACACAGAGACACACCTaGGTTTTGCCGCTACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLQHPLARGSMRSHTMKTQRHT*VLPLPG Trigger: CCCAGGTAGCGGCAAAACCCAGGTGTGTCTCTGTGT...CTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCTTGAGGCTGTCCCCGTCATTCCTCCATTaGAATCCACATACAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: AGDSSCPGRKAVGALRLSPSFLH*NPHTVH Trigger: ATGTACTGTATGTGGATTCCAATGGAGGAATGACGG...GGACAGCCTCAAGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGCTCGAGTCAAGTGGTTaGTCACCACCACTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLQHPLARGSMRSHTMLESSG*SPPLPH Trigger: GTGTGGCAGTGGTGGTGACCAACCACTTGACTCGAG...CATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 |
||
| CDS-3UTR CCA 90 bp | ACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTGAATCTTCTACCATCACCTTCCGATGCCGGTaGACAGGATGGCCGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGHKAPGASKGRFESSTITFRCR*TGWPWK Trigger: CTTCCACGGCCATCCTGTCCACCGGCATCGGAAGGT...GATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100718.4 |
||
| 3UTR CAA 72 bp | TTGAATCTTCTACCATCCCAATCTCGAGTCAAGTGGTaGGTCACCACCACTGCCACACCCAGGTCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNLLPSQSRVKW*VTTTATPRSRA Trigger: GGCCCGGGACCTGGGTGTGGCAGTGGTGGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGATTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGTTATCTTTCGGCCTCTaGGAAGCTGGACGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLQHPLARGSMRSHTMLSFGL*EAGRSP Trigger: AGGAGACCGTCCAGCTTCTCAGAGGCCGAAAGATAA...CATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | CATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAGCTCCCAGCCCCCTCAGTaGCATCCAGGAGAATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HEISHNEAEGTEACLLMSSQPPQ*HPGESG Trigger: CCCGGATTCTCCTGGATGTCACTGAGGGGGCTGGGA...GCTCATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR GCA 90 bp | CTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTCTCCAAGTCAGCAGCTaGCAGGTCTGCCACTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTAASPGQGLHEISHNEALQVSS*QVCHCF Trigger: AAAACAGTGGCAGACCTGGCAGCTGCTGACTTGGAG...AGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTGACATCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCACTCCAAGTCAGCAGCTaGCAGGTCTGCCACTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVTSRRIRVLGTKLQERPLQVSS*QVCHCF Trigger: AAAACAGTGGCAGACCTGGCAGCTGCTGACTTGGAG...TGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGATGTCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGAGAGTGCCCTTGACTAACTGGTACCATCTGCTAAGGTCTCGATGGCCAGACACACCTGGGTTTTaGCGCTACCTGGGCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SMRVPLTNWYHLLRSRWPDTPGF*RYLGHP Trigger: TGGGTGGCCCAGGTAGCGGCAAAACCCAGGTGTGTC...TGGCCATCGAGACCTTAGCAGATGGTACCAGTTAGTCAAGGGCACTCTCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR GCA 90 bp | TCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGGTAATTCTGGGCTCTaGTCCTCAGTCCCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SDEPETSALLGPMWQGTVGNSGL*SSVPNV Trigger: GACATTGGGGACTGAGGAGCAGAGCCCAGAATTACC...TACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR GCA 90 bp | CTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGGGTAATTCTGGGCTCTaGTCCTCAGTCCCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLQHPLARGSMRSHTMKGNSGL*SSVPNV Trigger: GACATTGGGGACTGAGGAGCAGAGCCCAGAATTACC...CTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR CCA 90 bp | GATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGCTTGGACAGGATGGCCGTaGAAGTCTTCAGTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DEPETSALLGPMWQGTVAWTGWP*KSSVPH Trigger: ATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCA...AGCTACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGGGCTTCCGATGCCGGTaGACAGGATGGCCGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHEISHNEAEGTEACLLMGFRCR*TGWPWK Trigger: CTTCCACGGCCATCCTGTCCACCGGCATCGGAAGCC...CATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | TCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAGGTTTTGCCGCTACCTaGGCCACCCACAATTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDEPETSALLGPMWQGTVGFAAT*ATHNFS Trigger: ACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACC...TACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGAGTTCTGCTGCAGGCTATaGGCCACATTTGCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TAASPGQGLHEISHNEAEFCCRL*ATFAAT Trigger: TGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAA...CTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | TCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGCAATCTCGAGTCAAGTaGTTGGTCACCTGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLQHPLARGSMRSHTMKLQSRVK*LVTCWA Trigger: AGCCCAGCAGGTGACCAACCACTTGACTCGAGATTG...CAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021033.16 |
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| CDS-3UTR CCA 90 bp | ACTCGGATTGTCTGGCTTGGTGGCAAGCATCTTCACTGGCTGAGCCATCTCACTGGAGAATCCGGGTACTaGGCACAAAGCTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRIVWLGGKHLHWLSHLTGESGY*AQSSRS Trigger: GCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCC...AGTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| 3UTR CAA 72 bp | CCAATGTCCCAATGTCTATCATCTCCTGCAGACCCGTaGGCTGGCGGGGAGACTTGGTCAGACATACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PMSQCLSSPADP*AGGETWSDILC Trigger: GCACAGTATGTCTGACCAAGTCTCCCCGCCAGCCAACGGGTCTGCAGGAGATGATAGACATTGGGACATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| CDS-3UTR TCA 90 bp | TCTTCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACACCGGAAGATGTCAAATaGACGCACCACCTGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSDEPETSALLGPMWQGTPEDVK*THHLYP Trigger: AGGATACAGGTGGTGCGTTCATTTGACATCTTCCGG...TGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR TCA 90 bp | GCATCTCAGTGGTGGAAGCTATGGTTAGCACACACAAGGTCCTGGATTCGAGTCGGGCGACCACTGCAGTaGCCGAGTCCACAATCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ASQWWKLWLAHTRSWIRVGRPLQ*PSPQSQ Trigger: TTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCC...GACTCGAATCCAGGACCTTGTGTGTGCTAACCATAGCTTCCACCACTGAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR GCA 90 bp | CCATTATGTGGGACCCAGGGATTGAACTCGGATTGTCTGGCTTGGTGGCAAGCAATGTCTATCATCTCCTaGAGACCCGTTGGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLCGTQGLNSDCLAWWQAMSIIS*RPVGWR Trigger: CCGCCAGCCAACGGGTCTGCAGGAGATGATAGACAT...TGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR CCA 90 bp | CTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGGACAAGCCACACTTCTaGGCTACTTCCTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLQHPLARGSMRSHTMKDKPHF*ATSSKS Trigger: TGACTTGGAGGAAGTAGCCCAGAAGTGTGGCTTGTC...CTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| CDS-3UTR CCA 90 bp | TCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTATGGACAGGATGGCCGTaGAAGTCTTCAGTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDEPETSALLGPMWQGTVWTGWP*KSSVPH Trigger: ATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCA...TACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGTGGACAGGATGGCCGTaGAAGTCTTCAGTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLQHPLARGSMRSHTMWTGWP*KSSVPH Trigger: ATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCA...CATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
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| CDS-3UTR CCA 90 bp | CGTTGGCTGCTACCGAGTGTCCCAGCCCCCTCAGTGACATCCAGGAGAATCCGGCCGTCATTCCTCCATTaGAATCCACATACAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: RWLLPSVPAPSVTSRRIRPSFLH*NPHTVH Trigger: ATGTACTGTATGTGGATTCCAATGGAGGAATGACGG...CCGGATTCTCCTGGATGTCACTGAGGGGGCTGGGACACTCGGTAGCAGCCAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| 3UTR CAA 72 bp | AGTAGCTGGAGGAGGCGGGACGCCGTCATTCCTCCATaGGAATCCACATACAGTACATTCTGCTGCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSWRRRDAVIPP*ESTYSTFCCRL Trigger: TAGCCTGCAGCAGAATGTACTGTATGTGGATTCCAATGGAGGAATGACGGCGTCCCGCCTCCTCCAGCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| 3UTR CAA 72 bp | CTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTaGAATCTTCTACCATCCCAATCTCGAGTCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTKLQERPRAG*NLLPSQSRVKW Trigger: CCACTTGACTCGAGATTGGGATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATGAGCCTGAGACCTCTGCACTGCTAGGTCCCATGTGGCAGGGGACAGTAAGCAGCTGCCAGGTCTaGCACTGTTTTTATCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SDEPETSALLGPMWQGTVSSCQV*HCFYLS Trigger: CGAAAGATAAAAACAGTGGCAGACCTGGCAGCTGCT...TACTGTCCCCTGCCACATGGGACCTAGCAGTGCAGAGGTCTCAGGCTCATCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| CDS-3UTR GCA 90 bp | TCTCTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAGCAGCTGCCAGGTCTaGCACTGTTTTTATCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLQHPLARGSMRSHTMSSCQV*HCFYLS Trigger: CGAAAGATAAAAACAGTGGCAGACCTGGCAGCTGCT...CATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTGAATCTTCTACCATCCTCCAAGTCAGCAGCTaGCAGGTCTGCCACTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGHKAPGASKGRFESSTILQVSS*QVCHCF Trigger: AAAACAGTGGCAGACCTGGCAGCTGCTGACTTGGAG...GATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | CCATTATGTGGGACCCAGGGATTGAACTCGGATTGTCTGGCTTGGTGGCAAGCATGGTCAGACATACTGTaGGTTGGCTGCTACCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLCGTQGLNSDCLAWWQAWSDIL*VGCYRV Trigger: CACTCGGTAGCAGCCAACGCACAGTATGTCTGACCA...TGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR CCA 90 bp | GGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTGAATCTTCTACCATCCCAGACAAGCCACACTTCTaGGCTACTTCCTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHKAPGASKGRFESSTIPDKPHF*ATSSKS Trigger: TGACTTGGAGGAAGTAGCCCAGAAGTGTGGCTTGTC...TGGGATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
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| CDS-3UTR CCA 90 bp | CATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAGCGGAGAATCCGGGTACTaGGCACAAAGCTCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HEISHNEAEGTEACLLMSGESGY*AQSSRS Trigger: GCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCC...GCTCATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR TCA 90 bp | CCCCTTTGTCATTCATCTCCATCCTTCAGGCCTATGCCTATCCCTGCTATGCCTTTATCTTTCGGCCTCTaGGAAGCTGGACGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLCHSSPSFRPMPIPAMPLSFGL*EAGRSP Trigger: AGGAGACCGTCCAGCTTCTCAGAGGCCGAAAGATAA...AGGCATAGCAGGGATAGGCATAGGCCTGAAGGATGGAGATGAATGACAAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCACTTGCCTGTTTCTCCTCATCTTGGGTTCTAGCCTGTAGTAGCTGGAGGTTATCTTTCGGCCTCTaGGAAGCTGGACGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RALACFSSSWVLACSSWRLSFGL*EAGRSP Trigger: AGGAGACCGTCCAGCTTCTCAGAGGCCGAAAGATAA...CCTCCAGCTACTACAGGCTAGAACCCAAGATGAGGAGAAACAGGCAAGTGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100718.4 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | ACTCGGATTGTCTGGCTTGGTGGCAAGCATCTTCACTGGCTGAGCCATCTCACTCCGGAAGATGTCAAATaGACGCACCACCTGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRIVWLGGKHLHWLSHLTPEDVK*THHLYP Trigger: AGGATACAGGTGGTGCGTTCATTTGACATCTTCCGG...AGTGAGATGGCTCAGCCAGTGAAGATGCTTGCCACCAAGCCAGACAATCCGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR GCA 90 bp | TTATGTGGGACCCAGGGATTGAACTCGGATTGTCTGGCTTGGTGGCAAGCATCTCTCCAAGTCAGCAGCTaGCAGGTCTGCCACTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCGTQGLNSDCLAWWQASLQVSS*QVCHCF Trigger: AAAACAGTGGCAGACCTGGCAGCTGCTGACTTGGAG...AGATGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | TTACGCCGGCATCAATTTTCCCAGCTGGCTCTATTTACTGTGCAAATTCTCCTGGGGAAAGCCGAGAACTaGGCCAGCAACACCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRRHQFSQLALFTVQILLGKAEN*ASNTLL Trigger: GAGGAGGGTGTTGCTGGCGCAGTTCTCGGCTTTCCC...CAGGAGAATTTGCACAGTAAATAGAGCCAGCTGGGAAAATTGATGCCGGCGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR GCA 90 bp | CATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAGCATGTCTATCATCTCCTaGAGACCCGTTGGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HEISHNEAEGTEACLLMSMSIIS*RPVGWR Trigger: CCGCCAGCCAACGGGTCTGCAGGAGATGATAGACAT...GCTCATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 |
||
| CDS-3UTR GCA 90 bp | CTCCATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAAGTGGGGCGACCACTaGAGTGACCGAGTCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LHEISHNEAEGTEACLLMKWGDH*SDRVHN Trigger: ATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTT...CATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCGACAAGCCACACTTCTaGGCTACTTCCTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGSMRSHTMKLRGLRLVFDKPHF*ATSSKS Trigger: TGACTTGGAGGAAGTAGCCCAGAAGTGTGGCTTGTC...GAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGTGCCGGTGGACAGGATaGCCGTGGAAGTCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHEISHNEAEGTEACLLMCRWTG*PWKSSV Trigger: AACTGAAGACTTCCACGGCCATCCTGTCCACCGGCA...CATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | CATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAGCTGCCGGTGGACAGGATaGCCGTGGAAGTCTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HEISHNEAEGTEACLLMSCRWTG*PWKSSV Trigger: AACTGAAGACTTCCACGGCCATCCTGTCCACCGGCA...GCTCATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCAGCAGCTGCCAGGTCTaGCACTGTTTTTATCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: RGSMRSHTMKLRGLRLVFSSCQV*HCFYLS Trigger: CGAAAGATAAAAACAGTGGCAGACCTGGCAGCTGCT...GAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGCTCCAAGTCAGCAGCTaGCAGGTCTGCCACTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHEISHNEAEGTEACLLMLQVSS*QVCHCF Trigger: AAAACAGTGGCAGACCTGGCAGCTGCTGACTTGGAG...CATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTAATTCTGGGCTCTGCTCCTCAGTCCCCAATGTCCCAATGTCTATCATCTCTCCAAGTCAGCAGCTaGCAGGTCTGCCACTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVILGSAPQSPMSQCLSSLQVSS*QVCHCF Trigger: AAAACAGTGGCAGACCTGGCAGCTGCTGACTTGGAG...AGATGATAGACATTGGGACATTGGGGACTGAGGAGCAGAGCCCAGAATTACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR CCA 90 bp | CATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAGCTTCTGCTGCAGGCTATaGGCCACATTTGCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HEISHNEAEGTEACLLMSFCCRL*ATFAAT Trigger: TGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAA...GCTCATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
||
| 3UTR CAA 72 bp | CTCTCTTCTCTCTTCCCATTATGTGGGACCCAGGGATaGAACTCGGATTGTCTGGCTTGGTGGCAAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSLFPLCGTQG*NSDCLAWWQAS Trigger: AGATGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAATGGGAAGAGAGAAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| CDS-3UTR TCA 90 bp | CATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAGCCCGGAAGATGTCAAATaGACGCACCACCTGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HEISHNEAEGTEACLLMSPEDVK*THHLYP Trigger: AGGATACAGGTGGTGCGTTCATTTGACATCTTCCGG...GCTCATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGGATGGCCACAGTGTTGGTAACAGACAGGGGGTTATTTTATTCACTAAGACACAGAGACACACCTaGGTTTTGCCGCTACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QMDGHSVGNRQGVILFTKTQRHT*VLPLPG Trigger: CCCAGGTAGCGGCAAAACCCAGGTGTGTCTCTGTGT...CTTAGTGAATAAAATAACCCCCTGTCTGTTACCAACACTGTGGCCATCCATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR CCA 90 bp | GCAAATTCTCCTGTGTCTGTTTATGGGTTAGGCTATGGTTCAGCACCTCTGGTTTTCTGCTGCAGGCTATaGGCCACATTTGCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ANSPVSVYGLGYGSAPLVFCCRL*ATFAAT Trigger: TGTGGCTGCAAATGTGGCCCATAGCCTGCAGCAGAA...AACCAGAGGTGCTGAACCATAGCCTAACCCATAAACAGACACAGGAGAATTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCCCGTCATTCCTCCATTaGAATCCACATACAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSMRSHTMKLRGLRLVFPSFLH*NPHTVH Trigger: ATGTACTGTATGTGGATTCCAATGGAGGAATGACGG...GAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
||
| CDS-3UTR CCA 90 bp | CATGTATTATTTACGCCGGCATCAATTTTCCCAGCTGGCTCTATTTACTGTGCAGGTTTTGCCGCTACCTaGGCCACCCACAATTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HVLFTPASIFPAGSIYCAGFAAT*ATHNFS Trigger: ACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACC...TGCACAGTAAATAGAGCCAGCTGGGAAAATTGATGCCGGCGTAAATAATACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCTACTGAATAACTTGCAGACTGAGAAACTGCCATCTTGCAGATGGGAACTCGAGTCAAGTGGTTaGTCACCACCACTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLLNNLQTEKLPSCRWELESSG*SPPLPH Trigger: GTGTGGCAGTGGTGGTGACCAACCACTTGACTCGAG...TTCCCATCTGCAAGATGGCAGTTTCTCAGTCTGCAAGTTATTCAGTAGAAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| 3UTR CAA 72 bp | GATAGTCCACAGGATGTATGGAAGCCAGAGGACCATTaGCAAGTCTCTCTTCTCTCTTCCCATTATGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSPQDVWKPEDH*QVSLLSSHYVG Trigger: TCCCACATAATGGGAAGAGAGAAGAGAGACTTGCAAATGGTCCTCTGGCTTCCATACATCCTGTGGACTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CAA 72 bp | GCTTTGCCTGGTTTAATATATTGCTTCTCACTTGGGTaGCAGGAAGTAACCTGCCAACCAACCAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALPGLIYCFSLG*QEVTCQPTSHG Trigger: ACCATGGCTGGTTGGTTGGCAGGTTACTTCCTGCAACCCAAGTGAGAAGCAATATATTAAACCAGGCAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGGATGGCCACAGTGTTGGTAACAGACAGGGGGTTATTTTATTCACTAAGAGCAGCTGCCAGGTCTaGCACTGTTTTTATCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QMDGHSVGNRQGVILFTKSSCQV*HCFYLS Trigger: CGAAAGATAAAAACAGTGGCAGACCTGGCAGCTGCT...CTTAGTGAATAAAATAACCCCCTGTCTGTTACCAACACTGTGGCCATCCATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTTCTACTGAATAACTTGCAGACTGAGAAACTGCCATCTTGCAGATGGGAAGGTAATTCTGGGCTCTaGTCCTCAGTCCCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLLNNLQTEKLPSCRWEGNSGL*SSVPNV Trigger: GACATTGGGGACTGAGGAGCAGAGCCCAGAATTACC...TTCCCATCTGCAAGATGGCAGTTTCTCAGTCTGCAAGTTATTCAGTAGAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| 3UTR CAA 72 bp | ATGGCCAAAGCGCATCAAGAGTGGCCGGTATTTGCTTaGCCTGGTTTAATATATTGCTTCTCACTTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MAKAHQEWPVFA*PGLIYCFSLGL Trigger: CAACCCAAGTGAGAAGCAATATATTAAACCAGGCAAAGCAAATACCGGCCACTCTTGATGCGCTTTGGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CAA 72 bp | GCCAGAGTTATGACTCTCAGATGGATGGCCACAGTGTaGGTAACAGACAGGGGGTTATTTTATTCACTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARVMTLRWMATV*VTDRGLFYSLR Trigger: TCTTAGTGAATAAAATAACCCCCTGTCTGTTACCAACACTGTGGCCATCCATCTGAGAGTCATAACTCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CAA 72 bp | AGGTTGACATTTCTGAGGTTGTTTCTACTGAATAACTaGCAGACTGAGAAACTGCCATCTTGCAGATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLTFLRLFLLNN*QTEKLPSCRWE Trigger: TTCCCATCTGCAAGATGGCAGTTTCTCAGTCTGCAAGTTATTCAGTAGAAACAACCTCAGAAATGTCAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| 3UTR CAA 72 bp | TTTAGTTCTGCCACCAGAACTGTCACATTTAAAGGCTaGGTTCTTTCTCTTAACAATATGAGATGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSATRTVTFKG*VLSLNNMRWEL Trigger: CAGCTCCCATCTCATATTGTTAAGAGAAAGAACCAAGCCTTTAAATGTGACAGTTCTGGTGGCAGAACTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000146053.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGGACAGTAGCTGCCCGGGAAGGAAAGCTGTGGGGGCCTTGAGGCTGTCCGCACTTGCCTGGGTTTaGCCGCTACCTGGGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: AGDSSCPGRKAVGALRLSALAWV*PLPGPP Trigger: GGGTGGCCCAGGTAGCGGCAAAACCCAGGCAAGTGC...GGACAGCCTCAAGGCCCCCACAGCTTTCCTTCCCGGGCAGCTACTGTCCCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092844.13 |
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| CDS CCA 90 bp | GCTGCCAGGTCTGCCACTGTTTTTATCTTTCGGCCTCTGAGAAGCTaGACGGTCTCCTCGGTGAGGCCCGGGCACAGCCCTGCCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AARSATVFIFRPLRS*TVSSVRPGHSPALS Trigger: GCTCAGGGCAGGGCTGTGCCCGGGCCTCACCGAGGAGACCGTCCAGCTTCTCAGAGGCCGAAAGATAAAAACAGTGGCAGACCTGGCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS-3UTR CAA 90 bp | GCGTTGGCTGCTACCGAGTGTCCCAGCCCCCTCAGTGACATCCAGGAGAATCCGCGGCGCCTGAAGAAGTaGCTTCCTGCTGGGCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: ALAATECPSPLSDIQENPRRLKK*LPAGLW Trigger: CCATAGCCCAGCAGGAAGCAACTTCTTCAGGCGCCG...CGGATTCTCCTGGATGTCACTGAGGGGGCTGGGACACTCGGTAGCAGCCAACGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGTCCCGGGCCAGGATCTaGAGCTCTCGGGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLQHPLARGSMRSHTMKSRARI*SSRASC Trigger: GCAGCTGGCCCGAGAGCTCAAGATCCTGGCCCGGGA...CTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 |
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| CDS-3UTR CAA 90 bp | CCATTATGTGGGACCCAGGGATTGAACTCGGATTGTCTGGCTTGGTGGCAAGCATCCCGGGCCAGGATCTaGAGCTCTCGGGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLCGTQGLNSDCLAWWQASRARI*SSRASC Trigger: GCAGCTGGCCCGAGAGCTCAAGATCCTGGCCCGGGA...TGCTTGCCACCAAGCCAGACAATCCGAGTTCAATCCCTGGGTCCCACATAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS TCA 90 bp | CACCTTCCCTCTGCTGACCTCCCAGAAGTGGGGCGACCACTGCAGTaGCCGAGTCCACAATCACAACCTTCACGGCGCCTGAAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HLPSADLPEVGRPLQ*PSPQSQPSRRLKKL Trigger: CAACTTCTTCAGGCGCCGTGAAGGTTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
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| CDS-3UTR CAA 90 bp | TCTCTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGCGGCGCCTGAAGAAGTaGCTTCCTGCTGGGCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLQHPLARGSMRSHTMRRLKK*LPAGLW Trigger: CCATAGCCCAGCAGGAAGCAACTTCTTCAGGCGCCG...CATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 ENSMUST00000135963.8 |
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| CDS CCA 90 bp | CACCTGTATCCTCTGGAGAGCACTTGCCTGGGTTTTGCCGCTACCTaGGCCACCCACAATTTCAGTCACCTCCCCAGTATAGAGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLYPLESTCLGFAAT*ATHNFSHLPSIEAS Trigger: GCTGGCCTCTATACTGGGGAGGTGACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACCCAGGCAAGTGCTCTCCAGAGGATACAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092844.13 |
||
| CDS CCA 90 bp | CGAGTCAAGTGGTTGGTCACCTTCCCTCTGCTGACCTCCCAGAAGTaGGGCGACCACTGCAGTGACCGAGTCCACAATCACAACCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVKWLVTFPLLTSQK*GDHCSDRVHNHNLH Trigger: GTGAAGGTTGTGATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGTGACCAACCACTTGACTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCCCTCAGTGACATCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGGCTATGGGCCACATTaGCAGCCACACAGAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: SPLSDIQENPGTGHKAPGGYGPH*QPHRDT Trigger: TGTGTCTCTGTGTGGCTGCAAATGTGGCCCATAGCC...TCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGATGTCACTGAGGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGAGGTCTCGAGTCAAGTGGTaGGTCACCACCACTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LQHPLARGSMRSHTMKLRSRVKW*VTTTAT Trigger: TGTGGCAGTGGTGGTGACCAACCACTTGACTCGAGA...CCTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018985.15 ENSMUST00000092844.13 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGCCAGCATCAAGTAGTTaGTCCAGGCTTCCGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLQHPLARGSMRSHTMPASSS*SRLPMP Trigger: CGGCATCGGAAGCCTGGACAAACTACTTGATGCTGG...CATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGAGCCAGCATCAAGTAGTTaGTCCAGGCTTCCGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TAASPGQGLHEISHNEAEPASSS*SRLPMP Trigger: CGGCATCGGAAGCCTGGACAAACTACTTGATGCTGG...CTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
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| CDS-3UTR CAA 90 bp | CTCACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGGCTATGGGCCACATTaGCAGCCACACAGAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LTAASPGQGLHEISHNEAGYGPH*QPHRDT Trigger: TGTGTCTCTGTGTGGCTGCAAATGTGGCCCATAGCC...AGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
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| CDS-3UTR CAA 90 bp | TCCAGGAGAATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTCCTCTGGAGAGCACTaGCCTGTTTCTCCTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRRIRVLGTKLQERPRAGSSGEH*PVSPHL Trigger: AAGATGAGGAGAAACAGGCAAGTGCTCTCCAGAGGA...ACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGATTCTCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| CDS GCA 90 bp | ATGAACGCACCACCTGTATCCTCTGGAGAGCACTTGCCTGGGTTTTaGCGCTACCTGGGCCACCCACAATTTCAGTCACCTCCCCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: MNAPPVSSGEHLPGF*RYLGHPQFQSPPQY Trigger: ATACTGGGGAGGTGACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACCCAGGCAAGTGCTCTCCAGAGGATACAGGTGGTGCGTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092844.13 |
||
| CDS CCA 90 bp | CCAAGGGCAGGTTTGAATCTTCTACCATCCCAATCTCGAGTCAAGTaGTTGGTCACCTGCTGGGCTATGGTGCCGCGAAGGTCCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRAGLNLLPSQSRVK*LVTCWAMVPRRSCS Trigger: GCTACAGGACCTTCGCGGCACCATAGCCCAGCAGGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGATTCAAACCTGCCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021033.16 |
||
| CDS-3UTR CAA 90 bp | ATCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTGAATCTTCCAGCATCAAGTAGTTaGTCCAGGCTTCCGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IRVLGTKLQERPRAGLNLPASSS*SRLPMP Trigger: CGGCATCGGAAGCCTGGACAAACTACTTGATGCTGG...AAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCCCTTTGTCATTCATCTCCATCCTTCAGGCCTATGCCTATCCCTGCTATCGGCGCCTGAAGAAGTaGCTTCCTGCTGGGCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: PAPLSFISILQAYAYPCYRRLKK*LPAGLW Trigger: CCATAGCCCAGCAGGAAGCAACTTCTTCAGGCGCCG...ATAGCAGGGATAGGCATAGGCCTGAAGGATGGAGATGAATGACAAAGGGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
||
| CDS TCA 90 bp | TCCGGGTACTGGGCACAAAGCTCCAGGAGCGTCCAAGGGCAGGTTTaGATCTTCTACCATCCCAATCTCGAGTCAAGTGGTTGGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SGYWAQSSRSVQGQV*IFYHPNLESSGWSP Trigger: AGGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGATTCAAACCTGCCCTTGGACGCTCCTGGAGCTTTGTGCCCAGTACCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021033.16 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGCATCCCCTGGCCAGGGGCTCCATGAGATCTCACACAATGAAGCTGAGTCCTCTGGAGAGCACTaGCCTGTTTCTCCTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: TAASPGQGLHEISHNEAESSGEH*PVSPHL Trigger: AAGATGAGGAGAAACAGGCAAGTGCTCTCCAGAGGA...CTCAGCTTCATTGTGTGAGATCTCATGGAGCCCCTGGCCAGGGGATGCTGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
||
| CDS GCA 90 bp | GTAGGACAAGCCACACTTCTGGGCTACTTCCTCCAAGTCAGCAGCTaGCAGGTCTGCCACTGTTTTTATCTTTCGGCCTCTGAGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGQATLLGYFLQVSS*QVCHCFYLSASEKL Trigger: CAGCTTCTCAGAGGCCGAAAGATAAAAACAGTGGCAGACCTGGCAGCTGCTGACTTGGAGGAAGTAGCCCAGAAGTGTGGCTTGTCCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
||
| CDS CCA 90 bp | CAAGTAGTTTGTCCAGGCTTCCGATGCCGGTGGACAGGATGGCCGTaGAAGTCTTCAGTTCCTCATAGAGATCTGCGCCATTTAAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QVVCPGFRCRWTGWP*KSSVPHRDLRHLRG Trigger: TCCCCTTAAATGGCGCAGATCTCTATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCACCGGCATCGGAAGCCTGGACAAACTACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
||
| CDS CCA 90 bp | AATCTTCTACCATCCCAATCTCGAGTCAAGTGGTTGGTCACCTGCTaGGCTATGGTGCCGCGAAGGTCCTGTAGCATATCTAGCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: NLLPSQSRVKWLVTC*AMVPRRSCSISSIR Trigger: CCGGATGCTAGATATGCTACAGGACCTTCGCGGCACCATAGCCCAGCAGGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021033.16 |
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| CDS GCA 90 bp | AGTAGTTTGTCCAGGCTTGTCCAGGTTCGCATACAAACCTTCCGATaGCGGTGGACAGGATGGCCGTGGAAGTCTTCAGTTCCTCATAGA | + |
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Preference number: 5 (lower is better) Translates to: SSLSRLVQVRIQTFR*RWTGWPWKSSVPHR Trigger: TCTATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCACCGGCATCGGAAGGTTTGTATGCGAACCTGGACAAGCCTGGACAAACTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100718.4 |
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| CDS CCA 90 bp | CAGCATCAAGTAGTTTGTCCAGGCTTCCGATGCCGGTGGACAGGATaGCCGTGGAAGTCTTCAGTTCCTCATAGAGATCTGCGCCATTTA | + |
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Preference number: 5 (lower is better) Translates to: QHQVVCPGFRCRWTG*PWKSSVPHRDLRHL Trigger: TAAATGGCGCAGATCTCTATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCACCGGCATCGGAAGCCTGGACAAACTACTTGATGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
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| CDS-3UTR CAA 90 bp | CATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAGCCCAGCATCAAGTAGTTaGTCCAGGCTTCCGATGCCG | + |
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Preference number: 5 (lower is better) Translates to: HEISHNEAEGTEACLLMSPASSS*SRLPMP Trigger: CGGCATCGGAAGCCTGGACAAACTACTTGATGCTGG...GCTCATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
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| CDS-3UTR CAA 90 bp | CAGATGGATGGCCACAGTGTTGGTAACAGACAGGGGGTTATTTTATTCACTAAGAGACACACCTGGGTTTaGCCGCTACCTGGGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: QMDGHSVGNRQGVILFTKRHTWV*PLPGPP Trigger: GGGTGGCCCAGGTAGCGGCAAAACCCAGGTGTGTCT...CTTAGTGAATAAAATAACCCCCTGTCTGTTACCAACACTGTGGCCATCCATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
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| CDS-3UTR CAA 90 bp | CATGAGATCTCACACAATGAAGCTGAGGGGACTGAGGCTTGTCTTCTGATGAGCGGCTATGGGCCACATTaGCAGCCACACAGAGACACA | + |
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Preference number: 5 (lower is better) Translates to: HEISHNEAEGTEACLLMSGYGPH*QPHRDT Trigger: TGTGTCTCTGTGTGGCTGCAAATGTGGCCCATAGCC...GCTCATCAGAAGACAAGCCTCAGTCCCCTCAGCTTCATTGTGTGAGATCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000135963.8 |
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| CDS-3UTR CAA 90 bp | ACCCAGATCATTTCTCTCTGCCTTTTATTTGCCGTTCCTGGTACCATCCTCCCCTCTCGAGTCAAGTGGTaGGTCACCACCACTGCCACA | + |
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Preference number: 5 (lower is better) Translates to: TQIISLCLLFAVPGTILPSRVKW*VTTTAT Trigger: TGTGGCAGTGGTGGTGACCAACCACTTGACTCGAGA...GGGGAGGATGGTACCAGGAACGGCAAATAAAAGGCAGAGAGAAATGATCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018985.15 |
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| CDS GCA 90 bp | TTGAATCTTCTACCATCCCAATCTCGAGTCAAGTGGTTGGTCACCTaGTGGGCTATGGTGCCGCGAAGGTCCTGTAGCATATCTAGCATC | + |
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Preference number: 5 (lower is better) Translates to: LNLLPSQSRVKWLVT*WAMVPRRSCSISSI Trigger: GATGCTAGATATGCTACAGGACCTTCGCGGCACCATAGCCCAGCAGGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGATTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021033.16 |
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| CDS CCA 72 bp | TCTGCCACTGTTTTTATCTTTCGGCCTCTGAGAAGCTaGACGGTCTCCTCGGTGAGGCCCGGGCACAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SATVFIFRPLRS*TVSSVRPGHSP Trigger: AGGGCTGTGCCCGGGCCTCACCGAGGAGACCGTCCAGCTTCTCAGAGGCCGAAAGATAAAAACAGTGGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| CDS CCA 72 bp | TGGTTGGTCACCTTCCCTCTGCTGACCTCCCAGAAGTaGGGCGACCACTGCAGTGACCGAGTCCACAATCAC | + |
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Preference number: 6 (lower is better) Translates to: WLVTFPLLTSQK*GDHCSDRVHNH Trigger: GTGATTGTGGACTCGGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGTGACCAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
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| CDS TCA 72 bp | AATCTCGAGTCAAGTGGTTGGTCACCTTCCCTCTGCTaGCCTCCCAGAAGTGGGGCGACCACTGCAGTGACC | + |
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Preference number: 6 (lower is better) Translates to: NLESSGWSPSLC*PPRSGATTAVT Trigger: GGTCACTGCAGTGGTCGCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGTGACCAACCACTTGACTCGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135963.8 |
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| CDS GCA 72 bp | CTCGAGTCAAGTGGTTGGTCACCTGCTGGGCTATGGTaGCGCGAAGGTCCTGTAGCATATCTAGCATCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LESSGWSPAGLW*REGPVAYLASG Trigger: TCCGGATGCTAGATATGCTACAGGACCTTCGCGGCACCATAGCCCAGCAGGTGACCAACCACTTGACTCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021033.16 |
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| CDS CCA 72 bp | TGTCCAGGCTTCCGATGCCGGTGGACAGGATGGCCGTaGAAGTCTTCAGTTCCTCATAGAGATCTGCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: CPGFRCRWTGWP*KSSVPHRDLRH Trigger: ATGGCGCAGATCTCTATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCACCGGCATCGGAAGCCTGGACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
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| CDS CCA 72 bp | CCTCTGGAGAGCACTTGCCTGGGTTTTGCCGCTACCTaGGCCACCCACAATTTCAGTCACCTCCCCAGTATA | + |
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Preference number: 6 (lower is better) Translates to: PLESTCLGFAAT*ATHNFSHLPSI Trigger: TATACTGGGGAGGTGACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACCCAGGCAAGTGCTCTCCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092844.13 |
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| CDS CAA 90 bp | AATGAACGCACCACCTGTATCCTCTGGAGAGCACTTGCCTGGGTTTaGCCGCTACCTGGGCCACCCACAATTTCAGTCACCTCCCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: NERTTCILWRALAWV*PLPGPPTISVTSPV Trigger: TACTGGGGAGGTGACTGAAATTGTGGGTGGCCCAGGTAGCGGCAAAACCCAGGCAAGTGCTCTCCAGAGGATACAGGTGGTGCGTTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092844.13 |
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| CDS GCA 72 bp | AGAGGCCAGCATCAAGTAGTTTGTCCAGGCTTCCGATaGCGGTGGACAGGATGGCCGTGGAAGTCTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: RGQHQVVCPGFR*RWTGWPWKSSV Trigger: AACTGAAGACTTCCACGGCCATCCTGTCCACCGGCATCGGAAGCCTGGACAAACTACTTGATGCTGGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
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| CDS GCA 72 bp | CTACCATCCCAATCTCGAGTCAAGTGGTTGGTCACCTaGTGGGCTATGGTGCCGCGAAGGTCCTGTAGCATA | + |
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Preference number: 6 (lower is better) Translates to: LPSQSRVKWLVT*WAMVPRRSCSI Trigger: TATGCTACAGGACCTTCGCGGCACCATAGCCCAGCAGGTGACCAACCACTTGACTCGAGATTGGGATGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021033.16 |
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| CDS GCA 72 bp | TCCAGGCTTGTCCAGGTTCGCATACAAACCTTCCGATaGCGGTGGACAGGATGGCCGTGGAAGTCTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SRLVQVRIQTFR*RWTGWPWKSSV Trigger: AACTGAAGACTTCCACGGCCATCCTGTCCACCGGCATCGGAAGGTTTGTATGCGAACCTGGACAAGCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100718.4 |
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| CDS CCA 72 bp | CCATCCCAATCTCGAGTCAAGTGGTTGGTCACCTGCTaGGCTATGGTGCCGCGAAGGTCCTGTAGCATATCT | + |
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Preference number: 6 (lower is better) Translates to: PSQSRVKWLVTC*AMVPRRSCSIS Trigger: AGATATGCTACAGGACCTTCGCGGCACCATAGCCCAGCAGGTGACCAACCACTTGACTCGAGATTGGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021033.16 |
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| CDS CCA 72 bp | CGGAAGATGTCAAATGAACGCACCACCTGTATCCTCTaGAGAGCACTTGCCTGGGTTTTGCCGCTACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RKMSNERTTCIL*RALAWVLPLPG Trigger: CCCAGGTAGCGGCAAAACCCAGGCAAGTGCTCTCCAGAGGATACAGGTGGTGCGTTCATTTGACATCTTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092844.13 |
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| CDS GCA 72 bp | GCCACACTTCTGGGCTACTTCCTCCAAGTCAGCAGCTaGCAGGTCTGCCACTGTTTTTATCTTTCGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ATLLGYFLQVSS*QVCHCFYLSAS Trigger: AGAGGCCGAAAGATAAAAACAGTGGCAGACCTGGCAGCTGCTGACTTGGAGGAAGTAGCCCAGAAGTGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000100718.4 ENSMUST00000135963.8 ENSMUST00000146053.8 |
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| CDS CCA 72 bp | GTAGTTTGTCCAGGCTTCCGATGCCGGTGGACAGGATaGCCGTGGAAGTCTTCAGTTCCTCATAGAGATCTG | + |
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Preference number: 6 (lower is better) Translates to: VVCPGFRCRWTG*PWKSSVPHRDL Trigger: CAGATCTCTATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCACCGGCATCGGAAGCCTGGACAAACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
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| CDS CCA 72 bp | CAGCATCAAGTAGTTTGTCCAGGCTTCCGATGCCGGTaGACAGGATGGCCGTGGAAGTCTTCAGTTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: QHQVVCPGFRCR*TGWPWKSSVPH Trigger: ATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCACCGGCATCGGAAGCCTGGACAAACTACTTGATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000018985.15 ENSMUST00000021033.16 ENSMUST00000092844.13 ENSMUST00000135963.8 |
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| CDS CCA 72 bp | GGTTTGAATCTTCTACCATCCCAATCTCGAGTCAAGTaGTTGGTCACCTGCTGGGCTATGGTGCCGCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GLNLLPSQSRVK*LVTCWAMVPRR Trigger: CCTTCGCGGCACCATAGCCCAGCAGGTGACCAACCACTTGACTCGAGATTGGGATGGTAGAAGATTCAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021033.16 |
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| CDS CAA 72 bp | CAGTATAGAGGCCAGCATCAAGTAGTTTGTCCAGGCTaGTCCAGGTTCGCATACAAACCTTCCGATGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: QYRGQHQVVCPG*SRFAYKPSDAG Trigger: ACCGGCATCGGAAGGTTTGTATGCGAACCTGGACAAGCCTGGACAAACTACTTGATGCTGGCCTCTATACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100718.4 |
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