Pregenerated sensors for RAD51C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007646Ensembl transcript IDs: ENSMUST00000007790.11, ENSMUST00000067692.13, ENSMUST00000129400.2, ENSMUST00000153073.8
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACAGACTGTGTGCTGCCTCCAACAATGGCTTGCAGGAGGTGCTCTaGGCAACCCAGCAGCAAGGAGGACACACAGACCAGGAGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: YRLCAASNNGLQEVL*ATQQQGGHTDQESA Trigger: TGCTGACTCCTGGTCTGTGTGTCCTCCTTGCTGCTGGGTTGCCCAGAGCACCTCCTGCAAGCCATTGTTGGAGGCAGCACACAGTCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR CCA 90 bp | CAGCCTCTCCCATACATACTCTTGGCCCTGACTTGGAGCCAAACCTaGCTCTGCCTCTCTCTAGGGCTTAGCTGTCCCCAGGCACAAAGA | + |
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Preference number: 1 (lower is better) Translates to: QPLPYILLALTWSQT*LCLSLGLSCPQAQR Trigger: TCTTTGTGCCTGGGGACAGCTAAGCCCTAGAGAGAGGCAGAGCCAGGTTTGGCTCCAAGTCAGGGCCAAGAGTATGTATGGGAGAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR GCA 90 bp | CTCCCATACATACTCTTGGCCCTGACTTGGAGCCAAACCTGGCTCTaGCTCTCTCTAGGGCTTAGCTGTCCCCAGGCACAAAGACTTGGA | + |
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Preference number: 1 (lower is better) Translates to: LPYILLALTWSQTWL*LSLGLSCPQAQRLG Trigger: TCCAAGTCTTTGTGCCTGGGGACAGCTAAGCCCTAGAGAGAGGCAGAGCCAGGTTTGGCTCCAAGTCAGGGCCAAGAGTATGTATGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR TCA 90 bp | AGATGTTCAGTGGGTAAAAGCCCTTGCTCTGCAAGCCTGACGACCTaGGTTCAATTCTCAGAGCCCACAGTGTGCTACACACCTGCATCC | + |
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Preference number: 1 (lower is better) Translates to: RCSVGKSPCSASLTT*VQFSEPTVCYTPAS Trigger: GGATGCAGGTGTGTAGCACACTGTGGGCTCTGAGAATTGAACTCAGGTCGTCAGGCTTGCAGAGCAAGGGCTTTTACCCACTGAACATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR GCA 90 bp | GACGACCTGAGTTCAATTCTCAGAGCCCACAGTGTGCTACACACCTaGATCCCAGGGTTCCTAGTGAGACAGGAGGCCAAAACAGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: DDLSSILRAHSVLHT*IPGFLVRQEAKTEV Trigger: TACTTCTGTTTTGGCCTCCTGTCTCACTAGGAACCCTGGGATGCAGGTGTGTAGCACACTGTGGGCTCTGAGAATTGAACTCAGGTCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR CCA 90 bp | AGAGACAAAACAGAAGACCCTGCCTCAGAGACAGGGTGGAGGAGCTaGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: RDKTEDPASETGWRS*RDGWLSSWEHFWFL Trigger: CAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCCACCCTGTCTCTGAGGCAGGGTCTTCTGTTTTGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR TCA 90 bp | CAGGAGGCCAAAACAGAAGTAGTTAAAGTGTGCAGACCTGGAGAATaGAGAGACAAAACAGAAGACCCTGCCTCAGAGACAGGGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: QEAKTEVVKVCRPGE*RDKTEDPASETGWR Trigger: CCTCCACCCTGTCTCTGAGGCAGGGTCTTCTGTTTTGTCTCTTCATTCTCCAGGTCTGCACACTTTAACTACTTCTGTTTTGGCCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR GCA 90 bp | GCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTaGAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: AGEMDGSAVGNIFGS*RTRFWFSAPSWWFS Trigger: ACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR GCA 90 bp | GTATGTCACACTGGGCATGACTTGAGCATTGGAGACCTAAAAATCTaGCCCCACAGTGACACATTACCTCCTACAAAGGCCACACTATTC | + |
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Preference number: 1 (lower is better) Translates to: VCHTGHDLSIGDLKI*PHSDTLPPTKATLF Trigger: GAATAGTGTGGCCTTTGTAGGAGGTAATGTGTCACTGTGGGGGCAGATTTTTAGGTCTCCAATGCTCAAGTCATGCCCAGTGTGACATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR CCA 90 bp | CCATCAAAGAAAGGACCATCTATTTCTTCATCAAGGATTCCAGGGTaGGGAGGGGCTTCAGACCTAAATCTCTCAGAGAAGGCCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: PSKKGPSISSSRIPG*GGASDLNLSEKAFS Trigger: AGAGAAGGCCTTCTCTGAGAGATTTAGGTCTGAAGCCCCTCCCCACCCTGGAATCCTTGATGAAGAAATAGATGGTCCTTTCTTTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR CCA 90 bp | ACACACTACACTCTGACTAGCACATCATCAGTTAACTGGATACACTaGCATCAGCATTTGGTCAGCATTCTTCCTCTGGTTCTCGTGACC | + |
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Preference number: 1 (lower is better) Translates to: THYTLTSTSSVNWIH*HQHLVSILPLVLVT Trigger: GGTCACGAGAACCAGAGGAAGAATGCTGACCAAATGCTGATGCCAGTGTATCCAGTTAACTGATGATGTGCTAGTCAGAGTGTAGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
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| 3UTR TCA 90 bp | CATATAACTCCAGTTCTAGGGGACATGATGCCCTCTTCCATGCTTTaGAGGCCTCCACACAGTTGGCAAACACACAGATACATATACACA | + |
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Preference number: 1 (lower is better) Translates to: HITPVLGDMMPSSML*RPPHSWQTHRYIYT Trigger: TGTGTATATGTATCTGTGTGTTTGCCAACTGTGTGGAGGCCTTCAAAGCATGGAAGAGGGCATCATGTCCCCTAGAACTGGAGTTATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR CCA 90 bp | CACACACACACACACTACACTCTGACTAGCACATCATCAGTTAACTaGATACACTGGCATCAGCATTTGGTCAGCATTCTTCCTCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: HTHTHYTLTSTSSVN*IHWHQHLVSILPLV Trigger: AACCAGAGGAAGAATGCTGACCAAATGCTGATGCCAGTGTATCCAGTTAACTGATGATGTGCTAGTCAGAGTGTAGTGTGTGTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
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| 3UTR CCA 90 bp | CTTCCCCTTCCTGGGCATTTCTTCCTGCAAAAGGTATTTAATCCCTaGTTCACCTTGAGTAAGGTGTATGCATTCACATCCACCATCAAA | + |
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Preference number: 1 (lower is better) Translates to: LPLPGHFFLQKVFNP*FTLSKVYAFTSTIK Trigger: TTTGATGGTGGATGTGAATGCATACACCTTACTCAAGGTGAACCAGGGATTAAATACCTTTTGCAGGAAGAAATGCCCAGGAAGGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR TCA 90 bp | CTGGGCATTTCTTCCTGCAAAAGGTATTTAATCCCTGGTTCACCTTaGGTAAGGTGTATGCATTCACATCCACCATCAAAGAAAGGACCA | + |
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Preference number: 1 (lower is better) Translates to: LGISSCKRYLIPGSP*VRCMHSHPPSKKGP Trigger: TGGTCCTTTCTTTGATGGTGGATGTGAATGCATACACCTTACTCAAGGTGAACCAGGGATTAAATACCTTTTGCAGGAAGAAATGCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR TCA 90 bp | AGGCCATTTAGTAATCGAGTACGAAGGGATAGATCTTCAAGGTCATaGCGAAAGGGAAAAGCAATTCCGTCTATTATCACTAGCTGCACC | + |
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Preference number: 1 (lower is better) Translates to: RPFSNRVRRDRSSRS*RKGKAIPSIITSCT Trigger: GGTGCAGCTAGTGATAATAGACGGAATTGCTTTTCCCTTTCGTCATGACCTTGAAGATCTATCCCTTCGTACTCGATTACTAAATGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
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| 3UTR TCA 90 bp | CTGAGGTGTGATCTGAAATGGTATCGTAGACTCCTTCTGGCTTGGTaGCTTGTACAATGTTGCAAATCTTTGCTTTTGTTCCCAGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LRCDLKWYRRLLLAW*LVQCCKSLLLFPVK Trigger: TTTCACTGGGAACAAAAGCAAAGATTTGCAACATTGTACAAGTCACCAAGCCAGAAGGAGTCTACGATACCATTTCAGATCACACCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGTGCAGCACATGTGTGCATCTTGGTGCTGCTGGGGTAGATAGGTGGCCCCAAAACAGAAGACCCTaGCTCAGAGACAGGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VQCSTCVHLGAAGVDRWPQNRRP*LRDRVE Trigger: CTCCACCCTGTCTCTGAGGCAGGGTCTTCTGTTTTG...GGGCCACCTATCTACCCCAGCAGCACCAAGATGCACACATGTGCTGCACTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR CAA 90 bp | ACCTTCAACCCCTATTACAGACTGTGTGCTGCCTCCAACAATGGCTaGCAGGAGGTGCTCTGGGCAACCCAGCAGCAAGGAGGACACACA | + |
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Preference number: 2 (lower is better) Translates to: TFNPYYRLCAASNNG*QEVLWATQQQGGHT Trigger: TGTGTGTCCTCCTTGCTGCTGGGTTGCCCAGAGCACCTCCTGCAAGCCATTGTTGGAGGCAGCACACAGTCTGTAATAGGGGTTGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAACAGGGTGGAGGAGCTaGAGAGATGGATGGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: EELERWMAQQLGTFLVLATGWRS*RDGWLS Trigger: GCTGAGCCATCCATCTCTCCAGCTCCTCCACCCTGT...TGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR CAA 90 bp | CTCAGAGACAGGGTGGAGGAGCTGGAGAGATGGATGGCTCAGCAGTaGGGAACATTTTTGGTTCTTGCAGGACTAGGTTCTGGTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LRDRVEELERWMAQQ*GTFLVLAGLGSGSQ Trigger: CTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCCACCCTGTCTCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR CAA 90 bp | GTGGAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTaGGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGT | + |
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Preference number: 2 (lower is better) Translates to: VEELERWMAQQLGTF*VLAGLGSGSQHLHG Trigger: ACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR-3UTR TCA 90 bp | CATCAAAGAAAGGACCATCTATTTCTTCATCAAGGATTCCAGGGTGGGGAGGGGACATACTCTTGGCCCTaGCTTGGAGCCAAACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: HQRKDHLFLHQGFQGGEGTYSWP*LGAKPG Trigger: GCCAGGTTTGGCTCCAAGTCAGGGCCAAGAGTATGT...CCCCTCCCCACCCTGGAATCCTTGATGAAGAAATAGATGGTCCTTTCTTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR-3UTR CCA 90 bp | CTACACACCTGCATCCCAGGGTTCCTAGTGAGACAGGAGGCCAAAACAGAAGTAAGCTGGAGAGATGGATaGCTCAGCAGTTGGGAACAT | + |
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Preference number: 2 (lower is better) Translates to: LHTCIPGFLVRQEAKTEVSWRDG*LSSWEH Trigger: ATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCT...TACTTCTGTTTTGGCCTCCTGTCTCACTAGGAACCCTGGGATGCAGGTGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR-3UTR CCA 90 bp | CATCAAAGAAAGGACCATCTATTTCTTCATCAAGGATTCCAGGGTGGGGAGGGGACTTGGAGCCAAACCTaGCTCTGCCTCTCTCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: HQRKDHLFLHQGFQGGEGTWSQT*LCLSLG Trigger: CCCTAGAGAGAGGCAGAGCCAGGTTTGGCTCCAAGT...CCCCTCCCCACCCTGGAATCCTTGATGAAGAAATAGATGGTCCTTTCTTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCCTTATTGTAGCAGCATGCCCCCAGCTTTCCCCTAATGCAGGAACAAGCCACCTTTGGATGATCTaGAAGGAAATCTGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: MSLIVAACPQLSPNAGTSHLWMI*KEIWKE Trigger: CTCCTTCCAGATTTCCTTTCAGATCATCCAAAGGTG...GCTTGTTCCTGCATTAGGGGAAAGCTGGGGGCATGCTGCTACAATAAGGCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
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| 3UTR-3UTR CCA 90 bp | CTACACACCTGCATCCCAGGGTTCCTAGTGAGACAGGAGGCCAAAACAGAAGTAGTTAACTGGATACACTaGCATCAGCATTTGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LHTCIPGFLVRQEAKTEVVNWIH*HQHLVS Trigger: GCTGACCAAATGCTGATGCCAGTGTATCCAGTTAAC...TACTTCTGTTTTGGCCTCCTGTCTCACTAGGAACCCTGGGATGCAGGTGTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGGACCATCTATTTCTTCATCAAGGATTCCAGGGTGGGGAGGGGCTTCAGATGCAGACCTGGAGAATaGAGAGACAAAACAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: ERTIYFFIKDSRVGRGFRCRPGE*RDKTED Trigger: GTCTTCTGTTTTGTCTCTTCATTCTCCAGGTCTGCA...TCTGAAGCCCCTCCCCACCCTGGAATCCTTGATGAAGAAATAGATGGTCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR-3UTR GCA 90 bp | ATGAGCCTTATTGTAGCAGCATGCCCCCAGCTTTCCCCTAATGCAGGAACAAGCAAGGAGATAGACTTGTaGCAGCAGCTCAGTATAATC | + |
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Preference number: 2 (lower is better) Translates to: MSLIVAACPQLSPNAGTSKEIDL*QQLSII Trigger: GATTATACTGAGCTGCTGGCACAAGTCTATCTCCTT...GCTTGTTCCTGCATTAGGGGAAAGCTGGGGGCATGCTGCTACAATAAGGCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACGGATGGCTCAGCAGTTaGGAACATTTTTGGTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: GSCRTRFWFSAPSWWFSYGWLSS*EHFWFL Trigger: CAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCC...GTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR CAA 90 bp | TTGATCCACAGACAGCAGGAGATTGTATGTCACACTGGGCATGACTaGAGCATTGGAGACCTAAAAATCTGCCCCCACAGTGACACATTA | + |
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Preference number: 2 (lower is better) Translates to: LIHRQQEIVCHTGHD*SIGDLKICPHSDTL Trigger: TAATGTGTCACTGTGGGGGCAGATTTTTAGGTCTCCAATGCTCAAGTCATGCCCAGTGTGACATACAATCTCCTGCTGTCTGTGGATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR CAA 90 bp | CTGACTAGCACATCATCAGTTAACTGGATACACTGGCATCAGCATTaGGTCAGCATTCTTCCTCTGGTTCTCGTGACCGTTTCCGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: LTSTSSVNWIHWHQH*VSILPLVLVTVSGN Trigger: ATTTCCGGAAACGGTCACGAGAACCAGAGGAAGAATGCTGACCAAATGCTGATGCCAGTGTATCCAGTTAACTGATGATGTGCTAGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGTGAGACAGGAGGCCAAAACAGAAGTAGTTAAAGTGTGCAGACCTGGAGAACTCCTTCTGGCTTGGTaGCTTGTACAATGTTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LVRQEAKTEVVKVCRPGELLLAW*LVQCCK Trigger: TTTGCAACATTGTACAAGTCACCAAGCCAGAAGGAG...TTCTCCAGGTCTGCACACTTTAACTACTTCTGTTTTGGCCTCCTGTCTCACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAAACATTTTTGGTTCTTaGAGGACTAGGTTCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: EELERWMAQQLGTFLVLANIFGS*RTRFWF Trigger: GAACCAGAACCTAGTCCTGCAAGAACCAAAAATGTT...TGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGACCATCTATTTCTTCATCAAGGATTCCAGGGTGGGGAGGGGCTTCAGATTAAGATCCCATATCTaGCAGCCAACCACATATAAC | + |
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Preference number: 2 (lower is better) Translates to: ERTIYFFIKDSRVGRGFRLRSHI*QPTTYN Trigger: GTTATATGTGGTTGGCTGCCAGATATGGGATCTTAA...TCTGAAGCCCCTCCCCACCCTGGAATCCTTGATGAAGAAATAGATGGTCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR-3UTR CCA 90 bp | AAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACAGCGTCTCTAAATCCCATCGTAGACTCCTTCTaGCTTGGTGACTTGTACAAT | + |
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Preference number: 2 (lower is better) Translates to: KELSVCDEAAVTTASLNPIVDSF*LGDLYN Trigger: ATTGTACAAGTCACCAAGCCAGAAGGAGTCTACGAT...GGGATTTAGAGACGCTGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129400.2 ENSMUST00000153073.8 |
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| 3UTR CAA 90 bp | CCTGGGCATTTCTTCCTGCAAAAGGTATTTAATCCCTGGTTCACCTaGAGTAAGGTGTATGCATTCACATCCACCATCAAAGAAAGGACC | + |
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Preference number: 2 (lower is better) Translates to: PGHFFLQKVFNPWFT*SKVYAFTSTIKERT Trigger: GGTCCTTTCTTTGATGGTGGATGTGAATGCATACACCTTACTCAAGGTGAACCAGGGATTAAATACCTTTTGCAGGAAGAAATGCCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR-3UTR TCA 90 bp | AAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACAGCGTCTCTAAATCCCAGATCTTCAAGGTCATaGCGAAAGGGAAAAGCAATT | + |
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Preference number: 2 (lower is better) Translates to: KELSVCDEAAVTTASLNPRSSRS*RKGKAI Trigger: AATTGCTTTTCCCTTTCGTCATGACCTTGAAGATCT...GGGATTTAGAGACGCTGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCTTCCTCTGGTTCTCGTGACCGTTTCCGGAAATTCAAAGAACTCTCTGTCATAACAGCTAATCTGTaGTTATTTGCAAGGCTGATC | + |
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Preference number: 2 (lower is better) Translates to: HSSSGSRDRFRKFKELSVITANL*LFARLI Trigger: GATCAGCCTTGCAAATAATCACAGATTAGCTGTTAT...GACAGAGAGTTCTTTGAATTTCCGGAAACGGTCACGAGAACCAGAGGAAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
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| 3UTR-3UTR GCA 90 bp | ATTAACTATAGGAATGGACTGTACTCCTTTAAGCCTAGAGGCAGACAGGTAGATAACATTTTTGGTTCTTaGAGGACTAGGTTCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: INYRNGLYSFKPRGRQVDNIFGS*RTRFWF Trigger: GAACCAGAACCTAGTCCTGCAAGAACCAAAAATGTT...ATCTACCTGTCTGCCTCTAGGCTTAAAGGAGTACAGTCCATTCCTATAGTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR GCA 72 bp | GACTGTGTGCTGCCTCCAACAATGGCTTGCAGGAGGTaGTCTGGGCAACCCAGCAGCAAGGAGGACACACAG | + |
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Preference number: 3 (lower is better) Translates to: DCVLPPTMACRR*SGQPSSKEDTQ Trigger: CTGTGTGTCCTCCTTGCTGCTGGGTTGCCCAGAGCACCTCCTGCAAGCCATTGTTGGAGGCAGCACACAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR CCA 72 bp | TGTGCTGCCTCCAACAATGGCTTGCAGGAGGTGCTCTaGGCAACCCAGCAGCAAGGAGGACACACAGACCAG | + |
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Preference number: 3 (lower is better) Translates to: CAASNNGLQEVL*ATQQQGGHTDQ Trigger: CTGGTCTGTGTGTCCTCCTTGCTGCTGGGTTGCCCAGAGCACCTCCTGCAAGCCATTGTTGGAGGCAGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR GCA 72 bp | GGCACAGACCTTCAACCCCTATTACAGACTGTGTGCTaGCTCCAACAATGGCTTGCAGGAGGTGCTCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: GTDLQPLLQTVC*LQQWLAGGALG Trigger: GCCCAGAGCACCTCCTGCAAGCCATTGTTGGAGGCAGCACACAGTCTGTAATAGGGGTTGAAGGTCTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR CCA 72 bp | CAACCCCTATTACAGACTGTGTGCTGCCTCCAACAATaGCTTGCAGGAGGTGCTCTGGGCAACCCAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: QPLLQTVCCLQQ*LAGGALGNPAA Trigger: TGCTGCTGGGTTGCCCAGAGCACCTCCTGCAAGCCATTGTTGGAGGCAGCACACAGTCTGTAATAGGGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR CCA 72 bp | CCATACATACTCTTGGCCCTGACTTGGAGCCAAACCTaGCTCTGCCTCTCTCTAGGGCTTAGCTGTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: PYILLALTWSQT*LCLSLGLSCPQ Trigger: CTGGGGACAGCTAAGCCCTAGAGAGAGGCAGAGCCAGGTTTGGCTCCAAGTCAGGGCCAAGAGTATGTATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTTACCATAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCCAGGCACAAAGACTaGGAGGGGAGGCACAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: KVYHSTREAEAGGFLSSRPRHKD*EGRHRP Trigger: AGGTCTGTGCCTCCCCTCCAAGTCTTTGTGCCTGGG...CCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTATGGTAAACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR TCA 72 bp | ACCATAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TIALGRQRQVDF*VRGQPGLQSEF Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR GCA 72 bp | GGAGGCACAGACCTTCAACCCCTATTACAGACTGTGTaGTGCCTCCAACAATGGCTTGCAGGAGGTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GGTDLQPLLQTV*CLQQWLAGGAL Trigger: CAGAGCACCTCCTGCAAGCCATTGTTGGAGGCAGCACACAGTCTGTAATAGGGGTTGAAGGTCTGTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR CCA 72 bp | TTCCAGCCTCTCCCATACATACTCTTGGCCCTGACTTaGAGCCAAACCTGGCTCTGCCTCTCTCTAGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FQPLPYILLALT*SQTWLCLSLGL Trigger: AAGCCCTAGAGAGAGGCAGAGCCAGGTTTGGCTCCAAGTCAGGGCCAAGAGTATGTATGGGAGAGGCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR TCA 72 bp | GTGGGTAAAAGCCCTTGCTCTGCAAGCCTGACGACCTaGGTTCAATTCTCAGAGCCCACAGTGTGCTACACA | + |
|
Preference number: 3 (lower is better) Translates to: VGKSPCSASLTT*VQFSEPTVCYT Trigger: TGTGTAGCACACTGTGGGCTCTGAGAATTGAACTCAGGTCGTCAGGCTTGCAGAGCAAGGGCTTTTACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| 3UTR GCA 72 bp | AGTTCAATTCTCAGAGCCCACAGTGTGCTACACACCTaGATCCCAGGGTTCCTAGTGAGACAGGAGGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSILRAHSVLHT*IPGFLVRQEAK Trigger: TTTGGCCTCCTGTCTCACTAGGAACCCTGGGATGCAGGTGTGTAGCACACTGTGGGCTCTGAGAATTGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTTTACCATAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCTCCCATACATACTCTaGGCCCTGACTTGGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KVYHSTREAEAGGFLSSRLPYIL*ALTWSQ Trigger: TTGGCTCCAAGTCAGGGCCAAGAGTATGTATGGGAG...CCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTATGGTAAACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR-3UTR CAA 90 bp | ATCCACCATCAAAGAAAGGACCATCTATTTCTTCATCAAGGATTCCAGGGTGGGGCCTCCAACAATGGCTaGCAGGAGGTGCTCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IHHQRKDHLFLHQGFQGGASNNG*QEVLWA Trigger: TGCCCAGAGCACCTCCTGCAAGCCATTGTTGGAGGC...CCCACCCTGGAATCCTTGATGAAGAAATAGATGGTCCTTTCTTTGATGGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR TCA 72 bp | CCAGTTCTAGGGGACATGATGCCCTCTTCCATGCTTTaGAGGCCTCCACACAGTTGGCAAACACACAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: PVLGDMMPSSML*RPPHSWQTHRY Trigger: GTATCTGTGTGTTTGCCAACTGTGTGGAGGCCTTCAAAGCATGGAAGAGGGCATCATGTCCCCTAGAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR GCA 72 bp | CATGCAGGCATGAGGACGGCATATAATAAAAGCTGGTaGAGTGCAGCACATGTGTGCATCTTGGTGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HAGMRTAYNKSW*SAAHVCILVLL Trigger: CAGCAGCACCAAGATGCACACATGTGCTGCACTGCACCAGCTTTTATTATATGCCGTCCTCATGCCTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| 3UTR CCA 72 bp | GCTGCCAAAGGTCCATTATCATCATGGTGGAAAGCATaGCGGCATGCAGACAGACATGGTACTAGAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AAKGPLSSWWKA*RHADRHGTRGA Trigger: AGCTCCTCTAGTACCATGTCTGTCTGCATGCCGCCATGCTTTCCACCATGATGATAATGGACCTTTGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR GCA 72 bp | ACTGGGCATGACTTGAGCATTGGAGACCTAAAAATCTaGCCCCACAGTGACACATTACCTCCTACAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGHDLSIGDLKI*PHSDTLPPTKA Trigger: GGCCTTTGTAGGAGGTAATGTGTCACTGTGGGGGCAGATTTTTAGGTCTCCAATGCTCAAGTCATGCCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR GCA 72 bp | ATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTaGAGGACTAGGTTCTGGTTCTCAGCACCTTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: MDGSAVGNIFGS*RTRFWFSAPSW Trigger: CCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| 3UTR CCA 72 bp | AAAGGACCATCTATTTCTTCATCAAGGATTCCAGGGTaGGGAGGGGCTTCAGACCTAAATCTCTCAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KGPSISSSRIPG*GGASDLNLSEK Trigger: CTTCTCTGAGAGATTTAGGTCTGAAGCCCCTCCCCACCCTGGAATCCTTGATGAAGAAATAGATGGTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR-3UTR CAA 90 bp | GACAACAGCGTCTCTAAATCCCTGAGGTGTGATCTGAAATGGTATCGTAGACTCCAGTTGGGAACATTTTaGGTTCTTGCAGGACTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: DNSVSKSLRCDLKWYRRLQLGTF*VLAGLG Trigger: ACCTAGTCCTGCAAGAACCAAAAATGTTCCCAACTG...GAGTCTACGATACCATTTCAGATCACACCTCAGGGATTTAGAGACGCTGTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| 3UTR TCA 72 bp | GATCCCCTGGAACTGGAGTTACTTGGTGCTGATAACTaGTCCAGGTCTTCTAAAAGAGCAACAAGTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: DPLELELLGADN*SRSSKRATSAL Trigger: AAGAGCACTTGTTGCTCTTTTAGAAGACCTGGATCAGTTATCAGCACCAAGTAACTCCAGTTCCAGGGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR TCA 72 bp | AGACATGGTACTAGAGGAGCTGAGAGTTCTATAGTTTaGTCCACAGACAGCAGGAGATTGTATGTCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: RHGTRGAESSIV*STDSRRLYVTL Trigger: CAGTGTGACATACAATCTCCTGCTGTCTGTGGATCAAACTATAGAACTCTCAGCTCCTCTAGTACCATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR CCA 72 bp | CCTGGGCATTTCTTCCTGCAAAAGGTATTTAATCCCTaGTTCACCTTGAGTAAGGTGTATGCATTCACATCC | + |
|
Preference number: 3 (lower is better) Translates to: PGHFFLQKVFNP*FTLSKVYAFTS Trigger: GGATGTGAATGCATACACCTTACTCAAGGTGAACCAGGGATTAAATACCTTTTGCAGGAAGAAATGCCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR CCA 72 bp | ACTCTGACTAGCACATCATCAGTTAACTGGATACACTaGCATCAGCATTTGGTCAGCATTCTTCCTCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TLTSTSSVNWIH*HQHLVSILPLV Trigger: AACCAGAGGAAGAATGCTGACCAAATGCTGATGCCAGTGTATCCAGTTAACTGATGATGTGCTAGTCAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCGGAAATTCAAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACAGCGTGCAAATCTTTGCTTTaGTTCCCAGTGAAAAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: FRKFKELSVCDEAAVTTACKSLL*FPVKNE Trigger: CTCATTTTTCACTGGGAACAAAAGCAAAGATTTGCA...CGCTGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTTGAATTTCCGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACAGCGTCTCTAAATCCCCAATGTTGCAAATCTTaGCTTTTGTTCCCAGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KELSVCDEAAVTTASLNPQCCKS*LLFPVK Trigger: TTTCACTGGGAACAAAAGCAAAGATTTGCAACATTG...GGGATTTAGAGACGCTGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
||
| 3UTR TCA 72 bp | AAAACAGAAGTAGTTAAAGTGTGCAGACCTGGAGAATaGAGAGACAAAACAGAAGACCCTGCCTCAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: KTEVVKVCRPGE*RDKTEDPASET Trigger: TGTCTCTGAGGCAGGGTCTTCTGTTTTGTCTCTTCATTCTCCAGGTCTGCACACTTTAACTACTTCTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| 3UTR CCA 72 bp | CCTCTCTCTAGGCCCCCAAAGCTACATTTAAGAATATaGAGGGACAGAGACATGACTCAGAAATTACTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PLSRPPKLHLRI*RDRDMTQKLLK Trigger: CTTAAGTAATTTCTGAGTCATGTCTCTGTCCCTCCATATTCTTAAATGTAGCTTTGGGGGCCTAGAGAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| 3UTR CCA 72 bp | ACACACTACACTCTGACTAGCACATCATCAGTTAACTaGATACACTGGCATCAGCATTTGGTCAGCATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: THYTLTSTSSVN*IHWHQHLVSIL Trigger: AAGAATGCTGACCAAATGCTGATGCCAGTGTATCCAGTTAACTGATGATGTGCTAGTCAGAGTGTAGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| 3UTR TCA 72 bp | AGTAATCGAGTACGAAGGGATAGATCTTCAAGGTCATaGCGAAAGGGAAAAGCAATTCCGTCTATTATCACT | + |
|
Preference number: 3 (lower is better) Translates to: SNRVRRDRSSRS*RKGKAIPSIIT Trigger: AGTGATAATAGACGGAATTGCTTTTCCCTTTCGTCATGACCTTGAAGATCTATCCCTTCGTACTCGATTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGCAGTGCAGCACATGTGTGCATCTTGGTGCTGCTGGGGTAGATAGGTGGACGTCCTCCGCCGTCTaGAACCCCGCAGCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVQCSTCVHLGAAGVDRWTSSAV*NPAATS Trigger: GCTGGTGGCTGCGGGGTTTCAGACGGCGGAGGACGT...CCACCTATCTACCCCAGCAGCACCAAGATGCACACATGTGCTGCACTGCACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGGAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCACGTCCTCCGCCGTCTaGAACCCCGCAGCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GWRSWRDGWLSSWEHFWFTSSAV*NPAATS Trigger: GCTGGTGGCTGCGGGGTTTCAGACGGCGGAGGACGT...GAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAGCATTCTTCCTCTGGTTCTCGTGACCGTTTCCGGAAATTCAAAGAACTCACGTCCTCCGCCGTCTaGAACCCCGCAGCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQHSSSGSRDRFRKFKELTSSAV*NPAATS Trigger: GCTGGTGGCTGCGGGGTTTCAGACGGCGGAGGACGT...GAGTTCTTTGAATTTCCGGAAACGGTCACGAGAACCAGAGGAAGAATGCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | GAGATCCACCACCCTCCGCTTGCTTTTGTAGGCACCCGCACACACACAGTGCACCCCTGGGTATGCTCTTaGTCGAGAAGTTCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIHHPPLAFVGTRTHTVHPWVCS*SRSSSA Trigger: AGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGG...GTGCACTGTGTGTGTGCGGGTGCCTACAAAAGCAAGCGGAGGGTGGTGGATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTGCAGTGCAGCACATGTGTGCATCTTGGTGCTGCTGGGGTAGATAGGTGGTCTTTCAGGCTCCTCTaGGAACACAGGGTACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVQCSTCVHLGAAGVDRWSFRLL*EHRVPP Trigger: AGGAGGTACCCTGTGTTCCCAGAGGAGCCTGAAAGA...CCACCTATCTACCCCAGCAGCACCAAGATGCACACATGTGCTGCACTGCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | GAGATCCACCACCCTCCGCTTGCTTTTGTAGGCACCCGCACACACACAGTGCACGTGATTATGAAGCCCTaGGTATGCTCTTGCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EIHHPPLAFVGTRTHTVHVIMKP*VCSCSR Trigger: TCTCGAGCAAGAGCATACCCAGGGCTTCATAATCAC...GTGCACTGTGTGTGTGCGGGTGCCTACAAAAGCAAGCGGAGGGTGGTGGATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTGCTCTGCAAGCCTGACGACCTGAGTTCAATTCTCAGAGCCCACAGTGTGCTGAATGCAGGCAGTTaGAAGGCTGACCACTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: PLLCKPDDLSSILRAHSVLNAGS*KADHSI Trigger: GATAGAGTGGTCAGCCTTGCAACTGCCTGCATTCAG...CACACTGTGGGCTCTGAGAATTGAACTCAGGTCGTCAGGCTTGCAGAGCAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | AACATTTTTGGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGAGGCCTTGCTGCTGCTaGGGAAATCCCACACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NIFGSCRTRFWFSAPSWWRPCCC*GNPTHW Trigger: CCAGTGTGTGGGATTTCCTCAGCAGCAGCAAGGCCT...CCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000007790.11 |
||
| CDS-3UTR TCA 90 bp | GAGATCCACCACCCTCCGCTTGCTTTTGTAGGCACCCGCACACACACAGTGCACAGATCTTCAAGGTCATaGCGAAAGGGAAAAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: EIHHPPLAFVGTRTHTVHRSSRS*RKGKAI Trigger: AATTGCTTTTCCCTTTCGTCATGACCTTGAAGATCT...GTGCACTGTGTGTGTGCGGGTGCCTACAAAAGCAAGCGGAGGGTGGTGGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGGACCATCTATTTCTTCATCAAGGATTCCAGGGTGGGGAGGGGCTTCAGACCCTGGGTATGCTCTTaGTCGAGAAGTTCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERTIYFFIKDSRVGRGFRPWVCS*SRSSSA Trigger: AGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGG...TCTGAAGCCCCTCCCCACCCTGGAATCCTTGATGAAGAAATAGATGGTCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS-3UTR GCA 90 bp | CTACACACCTGCATCCCAGGGTTCCTAGTGAGACAGGAGGCCAAAACAGAAGTAATGAAGCCCTGGGTATaGTCTTGCTCGAGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTCIPGFLVRQEAKTEVMKPWV*SCSRSS Trigger: GGAACTTCTCGAGCAAGAGCATACCCAGGGCTTCAT...TACTTCTGTTTTGGCCTCCTGTCTCACTAGGAACCCTGGGATGCAGGTGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | GAGATCCACCACCCTCCGCTTGCTTTTGTAGGCACCCGCACACACACAGTGCACAAACATTCTGGAATCTaGACATCTACTGCCAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EIHHPPLAFVGTRTHTVHKHSGI*TSTANC Trigger: GCAATTGGCAGTAGATGTGCAGATTCCAGAATGTTT...GTGCACTGTGTGTGTGCGGGTGCCTACAAAAGCAAGCGGAGGGTGGTGGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTTTACCATAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGTGTATCAATAAATACTaGTTCACCGGCCACGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVYHSTREAEAGGFLSSRCINKY*FTGHAP Trigger: GGGGGCGTGGCCGGTGAAGCAGTATTTATTGATACA...CCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTATGGTAAACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAGGCTGAATGCAGGCAGTTaGAAGGCTGACCACTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: GAGEMDGSAVGNIFGSCRLNAGS*KADHSI Trigger: GATAGAGTGGTCAGCCTTGCAACTGCCTGCATTCAG...CCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | AGAGACAAAACAGAAGACCCTGCCTCAGAGACAGGGTGGAGGAGCTGGAGAGATCTTATTGTAGCAGCATaGCCCCAGCTTTCCCCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RDKTEDPASETGWRSWRDLIVAA*PQLSPN Trigger: ATTAGGGGAAAGCTGGGGGCATGCTGCTACAATAAG...ATCTCTCCAGCTCCTCCACCCTGTCTCTGAGGCAGGGTCTTCTGTTTTGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| 3UTR CAA 72 bp | AGGGTGGAGGAGCTGGAGAGATGGATGGCTCAGCAGTaGGGAACATTTTTGGTTCTTGCAGGACTAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVEELERWMAQQ*GTFLVLAGLGS Trigger: AGAACCTAGTCCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCCACCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGGAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCCACCTTTGGATGATCTaGAAGGAAATCTGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWRSWRDGWLSSWEHFWFHLWMI*KEIWKE Trigger: CTCCTTCCAGATTTCCTTTCAGATCATCCAAAGGTG...GAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGCAGTGCAGCACATGTGTGCATCTTGGTGCTGCTGGGGTAGATAGGTGGAGATCTTCAAGGTCATaGCGAAAGGGAAAAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LVQCSTCVHLGAAGVDRWRSSRS*RKGKAI Trigger: AATTGCTTTTCCCTTTCGTCATGACCTTGAAGATCT...CCACCTATCTACCCCAGCAGCACCAAGATGCACACATGTGCTGCACTGCACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAGGGATTATTTGCAAGGCTaGTCATTTGTTGGGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GAGEMDGSAVGNIFGSCRDYLQG*SFVGRG Trigger: GCCTCGCCCAACAAATGATCAGCCTTGCAAATAATC...CCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGGAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCCTCCTTCTGGCTTGGTaGCTTGTACAATGTTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GWRSWRDGWLSSWEHFWFLLLAW*LVQCCK Trigger: TTTGCAACATTGTACAAGTCACCAAGCCAGAAGGAG...GAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 |
||
| CDS-3UTR GCA 90 bp | TCAGCATTTGGTCAGCATTCTTCCTCTGGTTCTCGTGACCGTTTCCGGAAATTCCCCTGGGTATGCTCTTaGTCGAGAAGTTCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAFGQHSSSGSRDRFRKFPWVCS*SRSSSA Trigger: AGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGG...GAATTTCCGGAAACGGTCACGAGAACCAGAGGAAGAATGCTGACCAAATGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGGACCATCTATTTCTTCATCAAGGATTCCAGGGTGGGGAGGGGCTTCAGAATGAAGCCCTGGGTATaGTCTTGCTCGAGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERTIYFFIKDSRVGRGFRMKPWV*SCSRSS Trigger: GGAACTTCTCGAGCAAGAGCATACCCAGGGCTTCAT...TCTGAAGCCCCTCCCCACCCTGGAATCCTTGATGAAGAAATAGATGGTCCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS-3UTR GCA 90 bp | GGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTGTATCAATAAATACTaGTTCACCGGCCACGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSCRTRFWFSAPSWWFSYCINKY*FTGHAP Trigger: GGGGGCGTGGCCGGTGAAGCAGTATTTATTGATACA...GTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAGGCTTATTGTAGCAGCATaGCCCCAGCTTTCCCCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GAGEMDGSAVGNIFGSCRLIVAA*PQLSPN Trigger: ATTAGGGGAAAGCTGGGGGCATGCTGCTACAATAAG...CCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGCCTTATTGTAGCAGCATGCCCCCAGCTTTCCCCTAATGCAGGAACAAGCGTGATTATGAAGCCCTaGGTATGCTCTTGCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSLIVAACPQLSPNAGTSVIMKP*VCSCSR Trigger: TCTCGAGCAAGAGCATACCCAGGGCTTCATAATCAC...GCTTGTTCCTGCATTAGGGGAAAGCTGGGGGCATGCTGCTACAATAAGGCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
||
| 3UTR CAA 72 bp | TCCAGTTCTAGGGGACATGATGCCCTCTTCCATGCTTaGAAGGCCTCCACACAGTTGGCAAACACACAGATA | + |
|
Preference number: 4 (lower is better) Translates to: SSSRGHDALFHA*KASTQLANTQI Trigger: TATCTGTGTGTTTGCCAACTGTGTGGAGGCCTTCAAAGCATGGAAGAGGGCATCATGTCCCCTAGAACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS-3UTR TCA 90 bp | AAAGTTTACCATAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCACCTTTGGATGATCTaGAAGGAAATCTGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVYHSTREAEAGGFLSSRHLWMI*KEIWKE Trigger: CTCCTTCCAGATTTCCTTTCAGATCATCCAAAGGTG...CCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTATGGTAAACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAGGCTCCTTCTGGCTTGGTaGCTTGTACAATGTTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GAGEMDGSAVGNIFGSCRLLLAW*LVQCCK Trigger: TTTGCAACATTGTACAAGTCACCAAGCCAGAAGGAG...CCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 |
||
| CDS-3UTR GCA 90 bp | GCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTAACGAAGTTCCAGTGCTGTaGACTTCTCGTTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLGSGSQHLHGGSVTSNEVPVL*TSRLPQ Trigger: CTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTC...GTTAGAAGTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCATTTGGTCAGCATTCTTCCTCTGGTTCTCGTGACCGTTTCCGGAAATTCGAAGTTCCAGTGCTGTaGACTTCTCGTTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SAFGQHSSSGSRDRFRKFEVPVL*TSRLPQ Trigger: CTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTC...GAATTTCCGGAAACGGTCACGAGAACCAGAGGAAGAATGCTGACCAAATGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTAACATGAAGCCCTGGGTATaGTCTTGCTCGAGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGLGSGSQHLHGGSVTSNMKPWV*SCSRSS Trigger: GGAACTTCTCGAGCAAGAGCATACCCAGGGCTTCAT...GTTAGAAGTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACAGCGTCTCTAAATCCCATGAAGCCCTGGGTATaGTCTTGCTCGAGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KELSVCDEAAVTTASLNPMKPWV*SCSRSS Trigger: GGAACTTCTCGAGCAAGAGCATACCCAGGGCTTCAT...GGGATTTAGAGACGCTGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCATTTGGTCAGCATTCTTCCTCTGGTTCTCGTGACCGTTTCCGGAAATTCCTGAATGCAGGCAGTTaGAAGGCTGACCACTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SAFGQHSSSGSRDRFRKFLNAGS*KADHSI Trigger: GATAGAGTGGTCAGCCTTGCAACTGCCTGCATTCAG...GAATTTCCGGAAACGGTCACGAGAACCAGAGGAAGAATGCTGACCAAATGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAGTGATTATGAAGCCCTaGGTATGCTCTTGCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EELERWMAQQLGTFLVLAVIMKP*VCSCSR Trigger: TCTCGAGCAAGAGCATACCCAGGGCTTCATAATCAC...TGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| 3UTR CAA 72 bp | AGACAGCAGGAGATTGTATGTCACACTGGGCATGACTaGAGCATTGGAGACCTAAAAATCTGCCCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQQEIVCHTGHD*SIGDLKICPHS Trigger: ACTGTGGGGGCAGATTTTTAGGTCTCCAATGCTCAAGTCATGCCCAGTGTGACATACAATCTCCTGCTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS-3UTR TCA 90 bp | GGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTAACTCCGATTATTTGCAAGGCTaGTCATTTGTTGGGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGSGSQHLHGGSVTSNSDYLQG*SFVGRG Trigger: GCCTCGCCCAACAAATGATCAGCCTTGCAAATAATC...GGAGTTAGAAGTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGCATTGGAGACCTAAAAATCTGCCCCCACAGTGACACATTACCTCCTACAGAAGTTCCAGTGCTGTaGACTTCTCGTTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSIGDLKICPHSDTLPPTEVPVL*TSRLPQ Trigger: CTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTC...TGTAGGAGGTAATGTGTCACTGTGGGGGCAGATTTTTAGGTCTCCAATGCTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS-3UTR GCA 90 bp | CGTTTCCGGAAATTCAAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACAGAAGTTCCAGTGCTGTaGACTTCTCGTTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RFRKFKELSVCDEAAVTTEVPVL*TSRLPQ Trigger: CTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTC...TGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTTGAATTTCCGGAAACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTTGGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCCTCGAGAAGTTCCAGTaGTGTGCACTTCTCGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFGSCRTRFWFSAPSWWFLEKFQ*CALLVC Trigger: GCAAACGAGAAGTGCACAGCACTGGAACTTCTCGAG...GAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | GGTCATGACGAAAGGGAAAAGCAATTCCGTCTATTATCACTAGCTGCACCTTTGCCCTGGGTATGCTCTTaGTCGAGAAGTTCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHDEREKQFRLLSLAAPLPWVCS*SRSSSA Trigger: AGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGG...CAAAGGTGCAGCTAGTGATAATAGACGGAATTGCTTTTCCCTTTCGTCATGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
||
| CDS-3UTR GCA 90 bp | GGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTAACTCCTTCCGTGTGTGTTCCTaGTATGAGATGAAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGSGSQHLHGGSVTSNSFRVCS*YEMKVL Trigger: CAGCACCTTCATCTCATAGCAGGAACACACACGGAA...GGAGTTAGAAGTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAAGGAGATAGACTTGTaGCAGCAGCTCAGTATAATC | + |
|
Preference number: 4 (lower is better) Translates to: GGAGEMDGSAVGNIFGSCKEIDL*QQLSII Trigger: GATTATACTGAGCTGCTGGCACAAGTCTATCTCCTT...GCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTAACCTTATTGTAGCAGCATaGCCCCAGCTTTCCCCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLGSGSQHLHGGSVTSNLIVAA*PQLSPN Trigger: ATTAGGGGAAAGCTGGGGGCATGCTGCTACAATAAG...GTTAGAAGTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAGGGGAAATCCCACACACTaGTTTCATGTAAGGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGEMDGSAVGNIFGSCRGNPTH*FHVRLS Trigger: AGACAACCTTACATGAAACCAGTGTGTGGGATTTCC...CCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000007790.11 |
||
| CDS-3UTR CCA 90 bp | CGTTTCCGGAAATTCAAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACACCTCCTCCTCCTTCATaGCTTTGCTTTTGTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RFRKFKELSVCDEAAVTTPPPPS*LCFCSQ Trigger: CTGGGAACAAAAGCAAAGCCATGAAGGAGGAGGAGG...TGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTTGAATTTCCGGAAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACAGCGTCTCTAAATCCCCACCTTTGGATGATCTaGAAGGAAATCTGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KELSVCDEAAVTTASLNPHLWMI*KEIWKE Trigger: CTCCTTCCAGATTTCCTTTCAGATCATCCAAAGGTG...GGGATTTAGAGACGCTGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTTTGGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTGATTATTTGCAAGGCTaGTCATTTGTTGGGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFLVLAGLGSGSQHLHGGDYLQG*SFVGRG Trigger: GCCTCGCCCAACAAATGATCAGCCTTGCAAATAATC...ACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGGAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCATAACAGCTAATCTGTaGTTATTTGCAAGGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GWRSWRDGWLSSWEHFWFITANL*LFARLI Trigger: GATCAGCCTTGCAAATAATCACAGATTAGCTGTTAT...GAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCCACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAGGAAACATTCTGGAATCTaGACATCTACTGCCAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAGEMDGSAVGNIFGSCRKHSGI*TSTANC Trigger: GCAATTGGCAGTAGATGTGCAGATTCCAGAATGTTT...CCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGCATTGGAGACCTAAAAATCTGCCCCCACAGTGACACATTACCTCCTACATTCCGTGTGTGTTCCTaGTATGAGATGAAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSIGDLKICPHSDTLPPTFRVCS*YEMKVL Trigger: CAGCACCTTCATCTCATAGCAGGAACACACACGGAA...TGTAGGAGGTAATGTGTCACTGTGGGGGCAGATTTTTAGGTCTCCAATGCTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS-3UTR GCA 90 bp | CATTCTTCCTCTGGTTCTCGTGACCGTTTCCGGAAATTCAAAGAACTCTCTGTCTTCCGTGTGTGTTCCTaGTATGAGATGAAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSSSGSRDRFRKFKELSVFRVCS*YEMKVL Trigger: CAGCACCTTCATCTCATAGCAGGAACACACACGGAA...GACAGAGAGTTCTTTGAATTTCCGGAAACGGTCACGAGAACCAGAGGAAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | CGTTTCCGGAAATTCAAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACAGTGATTATGAAGCCCTaGGTATGCTCTTGCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFRKFKELSVCDEAAVTTVIMKP*VCSCSR Trigger: TCTCGAGCAAGAGCATACCCAGGGCTTCATAATCAC...TGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTTGAATTTCCGGAAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCTGTTTTTCCAACACCTaGTACACCACAAACTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGAGEMDGSAVGNIFGSCCFSNT*YTTNFC Trigger: ACAGAAGTTTGTGGTGTACCAGGTGTTGGAAAAACA...GCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAGGTGTTTTTCCAACACCTaGTACACCACAAACTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGEMDGSAVGNIFGSCRCFSNT*YTTNFC Trigger: ACAGAAGTTTGTGGTGTACCAGGTGTTGGAAAAACA...CCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAAGGCTGATCATTTGTTaGGCGAGGCCATTTAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EELERWMAQQLGTFLVLARLIIC*ARPFSN Trigger: ATTACTAAATGGCCTCGCCCAACAAATGATCAGCCT...TGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACATCGTAGACTCCTTCTaGCTTGGTGACTTGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSCRTRFWFSAPSWWFSYIVDSF*LGDLYN Trigger: ATTGTACAAGTCACCAAGCCAGAAGGAGTCTACGAT...GTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 |
||
| CDS-3UTR GCA 90 bp | GCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTAACAAGGAGATAGACTTGTaGCAGCAGCTCAGTATAATC | + |
|
Preference number: 4 (lower is better) Translates to: AGLGSGSQHLHGGSVTSNKEIDL*QQLSII Trigger: GATTATACTGAGCTGCTGGCACAAGTCTATCTCCTT...GTTAGAAGTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | GGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTAACTCCAGGCTGATCATTTGTTaGGCGAGGCCATTTAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLGSGSQHLHGGSVTSNSRLIIC*ARPFSN Trigger: ATTACTAAATGGCCTCGCCCAACAAATGATCAGCCT...GGAGTTAGAAGTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| 3UTR CAA 72 bp | ACATCATCAGTTAACTGGATACACTGGCATCAGCATTaGGTCAGCATTCTTCCTCTGGTTCTCGTGACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSSVNWIHWHQH*VSILPLVLVTV Trigger: AACGGTCACGAGAACCAGAGGAAGAATGCTGACCAAATGCTGATGCCAGTGTATCCAGTTAACTGATGATGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | GGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTAACTCCAGATCTTCAAGGTCATaGCGAAAGGGAAAAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: GLGSGSQHLHGGSVTSNSRSSRS*RKGKAI Trigger: AATTGCTTTTCCCTTTCGTCATGACCTTGAAGATCT...GGAGTTAGAAGTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTTTGGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTAAGGAGATAGACTTGTaGCAGCAGCTCAGTATAATC | + |
|
Preference number: 4 (lower is better) Translates to: TFLVLAGLGSGSQHLHGGKEIDL*QQLSII Trigger: GATTATACTGAGCTGCTGGCACAAGTCTATCTCCTT...ACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | TTCCGGAAATTCAAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACAGCGTGTTTTTCCAACACCTaGTACACCACAAACTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRKFKELSVCDEAAVTTACFSNT*YTTNFC Trigger: ACAGAAGTTTGTGGTGTACCAGGTGTTGGAAAAACA...CGCTGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTTGAATTTCCGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS-3UTR CCA 90 bp | AACATTTTTGGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGATCGTAGACTCCTTCTaGCTTGGTGACTTGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NIFGSCRTRFWFSAPSWWIVDSF*LGDLYN Trigger: ATTGTACAAGTCACCAAGCCAGAAGGAGTCTACGAT...CCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 |
||
| CDS-3UTR TCA 90 bp | TTTAAGGAGGGCCTAGAAAGATGTTCAGTGGGTAAAAGCCCTTGCTCTGCAAGCAATGTTATCGAGTGCTaGACAGAAGGTGATTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKEGLERCSVGKSPCSASNVIEC*TEGDYE Trigger: TTCATAATCACCTTCTGTTCAGCACTCGATAACATT...GCTTGCAGAGCAAGGGCTTTTACCCACTGAACATCTTTCTAGGCCCTCCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | TTCCGGAAATTCAAAGAACTCTCTGTCTGTGATGAGGCAGCAGTGACAACAGCGAATGTTATCGAGTGCTaGACAGAAGGTGATTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRKFKELSVCDEAAVTTANVIEC*TEGDYE Trigger: TTCATAATCACCTTCTGTTCAGCACTCGATAACATT...CGCTGTTGTCACTGCTGCCTCATCACAGACAGAGAGTTCTTTGAATTTCCGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTTTGGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTAAACATTCTGGAATCTaGACATCTACTGCCAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFLVLAGLGSGSQHLHGGKHSGI*TSTANC Trigger: GCAATTGGCAGTAGATGTGCAGATTCCAGAATGTTT...ACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| CDS-3UTR CCA 90 bp | ATCCACCATCAAAGAAAGGACCATCTATTTCTTCATCAAGGATTCCAGGGTGGGAGGCTGATCATTTGTTaGGCGAGGCCATTTAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IHHQRKDHLFLHQGFQGGRLIIC*ARPFSN Trigger: ATTACTAAATGGCCTCGCCCAACAAATGATCAGCCT...CCCACCCTGGAATCCTTGATGAAGAAATAGATGGTCCTTTCTTTGATGGTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS-3UTR TCA 90 bp | AACATTTTTGGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGAATGTTATCGAGTGCTaGACAGAAGGTGATTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NIFGSCRTRFWFSAPSWWNVIEC*TEGDYE Trigger: TTCATAATCACCTTCTGTTCAGCACTCGATAACATT...CCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTTGGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAATGTTATCGAGTGCTaGACAGAAGGTGATTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: IFGSCRTRFWFSAPSWWFNVIEC*TEGDYE Trigger: TTCATAATCACCTTCTGTTCAGCACTCGATAACATT...GAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACCAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| CDS-3UTR TCA 90 bp | CTAGTGAGACAGGAGGCCAAAACAGAAGTAGTTAAAGTGTGCAGACCTGGAGAAATAACAGCTAATCTGTaGTTATTTGCAAGGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LVRQEAKTEVVKVCRPGEITANL*LFARLI Trigger: GATCAGCCTTGCAAATAATCACAGATTAGCTGTTAT...TTCTCCAGGTCTGCACACTTTAACTACTTCTGTTTTGGCCTCCTGTCTCACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAATCTGGAAGGAGATAGACTTGTGCCAGCAGCTCAGTATAATCATGACATGTTTTTCCAACACCTaGTACACCACAAACTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KEIWKEIDLCQQLSIIMTCFSNT*YTTNFC Trigger: ACAGAAGTTTGTGGTGTACCAGGTGTTGGAAAAACA...TGTCATGATTATACTGAGCTGCTGGCACAAGTCTATCTCCTTCCAGATTTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
||
| 3UTR CAA 72 bp | TTCTTCCTGCAAAAGGTATTTAATCCCTGGTTCACCTaGAGTAAGGTGTATGCATTCACATCCACCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFLQKVFNPWFT*SKVYAFTSTIK Trigger: TTTGATGGTGGATGTGAATGCATACACCTTACTCAAGGTGAACCAGGGATTAAATACCTTTTGCAGGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS TCA 90 bp | TTGCTGAGCTCGGAGGGCTTCACCTCTAGGACGTCCTCCGCCGTCTaGAACCCCGCAGCCACCAGCTTCCCGCGCACCGCTGGAGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSSEGFTSRTSSAV*NPAATSFPRTAGDS Trigger: GCTGTCTCCAGCGGTGCGCGGGAAGCTGGTGGCTGCGGGGTTTCAGACGGCGGAGGACGTCCTAGAGGTGAAGCCCTCCGAGCTCAGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
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| CDS GCA 90 bp | GGTGATTATGAAGCCCTGGGTATGCTCTTGCTCGAGAAGTTCCAGTaGTGTGCACTTCTCGTTTGCCACAGATGTACCGGCACATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDYEALGMLLLEKFQ*CALLVCHRCTGTSW Trigger: CCAAGATGTGCCGGTACATCTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGGCTTCATAATCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTAACGCCCTGGGTATGCTCTaGCTCGAGAAGTTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGLGSGSQHLHGGSVTSNALGML*LEKFQC Trigger: GCACTGGAACTTCTCGAGCAAGAGCATACCCAGGGC...GTTAGAAGTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTGCAGTGCAGCACATGTGTGCATCTTGGTGCTGCTGGGGTAGATAGGTGGTCCTCCTTCATGGCTTaGCTTTTGTTCCCAGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVQCSTCVHLGAAGVDRWSSFMA*LLFPVK Trigger: TTTCACTGGGAACAAAAGCAAAGCCATGAAGGAGGA...CCACCTATCTACCCCAGCAGCACCAAGATGCACACATGTGCTGCACTGCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS-3UTR CAA 90 bp | CTAGTGAGACAGGAGGCCAAAACAGAAGTAGTTAAAGTGTGCAGACCTGGAGAAGCCCTGGGTATGCTCTaGCTCGAGAAGTTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVRQEAKTEVVKVCRPGEALGML*LEKFQC Trigger: GCACTGGAACTTCTCGAGCAAGAGCATACCCAGGGC...TTCTCCAGGTCTGCACACTTTAACTACTTCTGTTTTGGCCTCCTGTCTCACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS GCA 90 bp | TCGAGTGCTGAACAGAAGGTGATTATGAAGCCCTGGGTATGCTCTTaGTCGAGAAGTTCCAGTGCTGTGCACTTCTCGTTTGCCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSAEQKVIMKPWVCS*SRSSSAVHFSFATD Trigger: ATCTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGGCTTCATAATCACCTTCTGTTCAGCACTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS GCA 90 bp | ATGTTATCGAGTGCTGAACAGAAGGTGATTATGAAGCCCTGGGTATaGTCTTGCTCGAGAAGTTCCAGTGCTGTGCACTTCTCGTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MLSSAEQKVIMKPWV*SCSRSSSAVHFSFA Trigger: GGCAAACGAGAAGTGCACAGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGGCTTCATAATCACCTTCTGTTCAGCACTCGATAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS CCA 90 bp | CCAAGAATGTTATCGAGTGCTGAACAGAAGGTGATTATGAAGCCCTaGGTATGCTCTTGCTCGAGAAGTTCCAGTGCTGTGCACTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PRMLSSAEQKVIMKP*VCSCSRSSSAVHFS Trigger: CGAGAAGTGCACAGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGGCTTCATAATCACCTTCTGTTCAGCACTCGATAACATTCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGGTCATGACGAAAGGGAAAAGCAATTCCGTCTATTATCACTAGCTGCAGCCCTGGGTATGCTCTaGCTCGAGAAGTTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQGHDEREKQFRLLSLAAALGML*LEKFQC Trigger: GCACTGGAACTTCTCGAGCAAGAGCATACCCAGGGC...TGCAGCTAGTGATAATAGACGGAATTGCTTTTCCCTTTCGTCATGACCTTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129400.2 |
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| CDS GCA 90 bp | GGTATGCTCTTGCTCGAGAAGTTCCAGTGCTGTGCACTTCTCGTTTaGCACAGATGTACCGGCACATCTTGGTTTATTTGTGAGACATTC | + |
|
Preference number: 5 (lower is better) Translates to: GMLLLEKFQCCALLV*HRCTGTSWFICETF Trigger: GAATGTCTCACAAATAAACCAAGATGTGCCGGTACATCTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTCTCGAGCAAGAGCATACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
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| CDS GCA 90 bp | CGTGTGTGTTCCTGCTATGAGATGAAGGTGCTGAATGCAGGCAGTTaGAAGGCTGACCACTCTATCAACCATAAAACTTCCCTCTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: RVCSCYEMKVLNAGS*KADHSINHKTSLCI Trigger: GATACAGAGGGAAGTTTTATGGTTGATAGAGTGGTCAGCCTTGCAACTGCCTGCATTCAGCACCTTCATCTCATAGCAGGAACACACACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
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| CDS GCA 90 bp | AAAATCCTTCAAGGCTTTCTGATGTTCTTCTTCCGTGTGTGTTCCTaGTATGAGATGAAGGTGCTGAATGCAGGCAGTTGCAAGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KILQGFLMFFFRVCS*YEMKVLNAGSCKAD Trigger: GTCAGCCTTGCAACTGCCTGCATTCAGCACCTTCATCTCATAGCAGGAACACACACGGAAGAAGAACATCAGAAAGCCTTGAAGGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS-3UTR CAA 90 bp | GGGTGGAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTGCAAATCTTTGCTTTaGTTCCCAGTGAAAAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GWRSWRDGWLSSWEHFWFCKSLL*FPVKNE Trigger: CTCATTTTTCACTGGGAACAAAAGCAAAGATTTGCA...GAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCCACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 |
||
| CDS-3UTR CAA 90 bp | GGGTGGAGGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCCAATGTTGCAAATCTTaGCTTTTGTTCCCAGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GWRSWRDGWLSSWEHFWFQCCKS*LLFPVK Trigger: TTTCACTGGGAACAAAAGCAAAGATTTGCAACATTG...GAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCCTCCACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGAGAGATGGATGGCTCAGCAGTTGGGAACATTTTTGGTTCTTGCAGGCAATGTTGCAAATCTTaGCTTTTGTTCCCAGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GAGEMDGSAVGNIFGSCRQCCKS*LLFPVK Trigger: TTTCACTGGGAACAAAAGCAAAGATTTGCAACATTG...CCTGCAAGAACCAAAAATGTTCCCAACTGCTGAGCCATCCATCTCTCCAGCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 |
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| CDS-3UTR CAA 90 bp | GGTTCTTGCAGGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTGGCTTGGTGACTaGTACAATGTTGCAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSCRTRFWFSAPSWWFSYFWLGD*YNVANL Trigger: AAGATTTGCAACATTGTACAAGTCACCAAGCCAGAA...GTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCCTGCAAGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 |
||
| CDS-3UTR CAA 90 bp | TTCTTCATCAAGGATTCCAGGGTGGGGAGGGGCTTCAGACCTAAATCTCTCAGATTCTGGCTTGGTGACTaGTACAATGTTGCAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: FFIKDSRVGRGFRPKSLRFWLGD*YNVANL Trigger: AAGATTTGCAACATTGTACAAGTCACCAAGCCAGAA...TCTGAGAGATTTAGGTCTGAAGCCCCTCCCCACCCTGGAATCCTTGATGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067692.13 |
||
| CDS-3UTR CAA 90 bp | GGACTAGGTTCTGGTTCTCAGCACCTTCATGGTGGTTCAGTTACTTCTAACTCCTGCAAATCTTTGCTTTaGTTCCCAGTGAAAAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLGSGSQHLHGGSVTSNSCKSLL*FPVKNE Trigger: CTCATTTTTCACTGGGAACAAAAGCAAAGATTTGCA...GGAGTTAGAAGTAACTGAACCACCATGAAGGTGCTGAGAACCAGAACCTAGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 |
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| CDS TCA 72 bp | TCGGAGGGCTTCACCTCTAGGACGTCCTCCGCCGTCTaGAACCCCGCAGCCACCAGCTTCCCGCGCACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SEGFTSRTSSAV*NPAATSFPRTA Trigger: AGCGGTGCGCGGGAAGCTGGTGGCTGCGGGGTTTCAGACGGCGGAGGACGTCCTAGAGGTGAAGCCCTCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
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| CDS CCA 72 bp | CTGAAACCCCGCAGCCACCAGCTTCCCGCGCACCGCTaGAGACAGCGGATAACCCACCAACTCCCGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LKPRSHQLPAHR*RQRITHQLPLH Trigger: ATGCAGCGGGAGTTGGTGGGTTATCCGCTGTCTCCAGCGGTGCGCGGGAAGCTGGTGGCTGCGGGGTTTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS GCA 72 bp | GAAGCCCTGGGTATGCTCTTGCTCGAGAAGTTCCAGTaGTGTGCACTTCTCGTTTGCCACAGATGTACCGGC | + |
|
Preference number: 6 (lower is better) Translates to: EALGMLLLEKFQ*CALLVCHRCTG Trigger: GCCGGTACATCTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
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| CDS GCA 72 bp | CCTGGGTATGCTCTTGCTCGAGAAGTTCCAGTGCTGTaGACTTCTCGTTTGCCACAGATGTACCGGCACATC | + |
|
Preference number: 6 (lower is better) Translates to: PGYALAREVPVL*TSRLPQMYRHI Trigger: GATGTGCCGGTACATCTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTCTCGAGCAAGAGCATACCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
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| CDS CAA 90 bp | CCTCTGGGAACACAGGGTACCTCCTCCTCCTTCATGGCTTTGCTTTaGTTCCCAGTGAAAAATGAGCCTTATTGTAGCAGCATGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLGTQGTSSSFMALL*FPVKNEPYCSSMPP Trigger: TGGGGGCATGCTGCTACAATAAGGCTCATTTTTCACTGGGAACAAAAGCAAAGCCATGAAGGAGGAGGAGGTACCCTGTGTTCCCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS CAA 90 bp | CAGGCTCCTCTGGGAACACAGGGTACCTCCTCCTCCTTCATGGCTTaGCTTTTGTTCCCAGTGAAAAATGAGCCTTATTGTAGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: QAPLGTQGTSSSFMA*LLFPVKNEPYCSSM Trigger: CATGCTGCTACAATAAGGCTCATTTTTCACTGGGAACAAAAGCAAAGCCATGAAGGAGGAGGAGGTACCCTGTGTTCCCAGAGGAGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS GCA 72 bp | GAACAGAAGGTGATTATGAAGCCCTGGGTATGCTCTTaGTCGAGAAGTTCCAGTGCTGTGCACTTCTCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EQKVIMKPWVCS*SRSSSAVHFSF Trigger: AAACGAGAAGTGCACAGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGGCTTCATAATCACCTTCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS GCA 72 bp | GCTTCACCGGCCACGCCCCCAAAACATTCTGGAATCTaGACATCTACTGCCAATTGCATACATAACTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASPATPPKHSGI*TSTANCIHNCV Trigger: AACACAGTTATGTATGCAATTGGCAGTAGATGTGCAGATTCCAGAATGTTTTGGGGGCGTGGCCGGTGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS GCA 72 bp | CAAGGCTTTCTGATGTTCTTCTTCCGTGTGTGTTCCTaGTATGAGATGAAGGTGCTGAATGCAGGCAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGFLMFFFRVCS*YEMKVLNAGSC Trigger: GCAACTGCCTGCATTCAGCACCTTCATCTCATAGCAGGAACACACACGGAAGAAGAACATCAGAAAGCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
||
| CDS CCA 72 bp | TTATCGAGTGCTGAACAGAAGGTGATTATGAAGCCCTaGGTATGCTCTTGCTCGAGAAGTTCCAGTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSAEQKVIMKP*VCSCSRSSSAV Trigger: CACAGCACTGGAACTTCTCGAGCAAGAGCATACCCAGGGCTTCATAATCACCTTCTGTTCAGCACTCGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS CAA 72 bp | CTTGCTCGAGAAGTTCCAGTGCTGTGCACTTCTCGTTaGCCACAGATGTACCGGCACATCTTGGTTTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAREVPVLCTSR*PQMYRHILVYL Trigger: CAAATAAACCAAGATGTGCCGGTACATCTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTCTCGAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS GCA 72 bp | TTGCTCGAGAAGTTCCAGTGCTGTGCACTTCTCGTTTaGCACAGATGTACCGGCACATCTTGGTTTATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLEKFQCCALLV*HRCTGTSWFIC Trigger: ACAAATAAACCAAGATGTGCCGGTACATCTGTGGCAAACGAGAAGTGCACAGCACTGGAACTTCTCGAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000129400.2 ENSMUST00000153073.8 |
||
| CDS CAA 72 bp | CTGGGAACACAGGGTACCTCCTCCTCCTTCATGGCTTaGCTTTTGTTCCCAGTGAAAAATGAGCCTTATTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGTQGTSSSFMA*LLFPVKNEPYC Trigger: ACAATAAGGCTCATTTTTCACTGGGAACAAAAGCAAAGCCATGAAGGAGGAGGAGGTACCCTGTGTTCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153073.8 |
||
| CDS TCA 72 bp | AGAATATTTTCAAGAGTAAAATCCTTCAAGGCTTTCTaGTGTTCTTCTTCCGTGTGTGTTCCTGCTATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RIFSRVKSFKAF*CSSSVCVPAMR Trigger: TCTCATAGCAGGAACACACACGGAAGAAGAACATCAGAAAGCCTTGAAGGATTTTACTCTTGAAAATATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007790.11 ENSMUST00000067692.13 ENSMUST00000153073.8 |
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