Pregenerated sensors for RAD51 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027323Ensembl transcript IDs: ENSMUST00000028795.10, ENSMUST00000140939.8, ENSMUST00000151406.2, ENSMUST00000152327.8
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCGAGCCGCCTCTCATGGGGACTGGGACTCAGACGCGGGTTATCTaGAAGAGCAGCAAGTGCTCTAAGCTGATAAGCTCTCGATTCAGG | + |
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Preference number: 1 (lower is better) Translates to: SEPPLMGTGTQTRVI*KSSKCSKLISSRFR Trigger: CCTGAATCGAGAGCTTATCAGCTTAGAGCACTTGCTGCTCTTCCAGATAACCCGCGTCTGAGTCCCAGTCCCCATGAGAGGCGGCTCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR GCA 90 bp | AAGCAAGCAATCTTAACTGCCAAGCCACGTCTACGGAGGCCCCAGTaGTTGCCTGGCTTTCTGGGCCTTCTGTTTCTCTTGCCTCCATGC | + |
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Preference number: 1 (lower is better) Translates to: KQAILTAKPRLRRPQ*LPGFLGLLFLLPPC Trigger: GCATGGAGGCAAGAGAAACAGAAGGCCCAGAAAGCCAGGCAAGCACTGGGGCCTCCGTAGACGTGGCTTGGCAGTTAAGATTGCTTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR GCA 90 bp | CACACACACACACACTCTCAGAGCGAGCAAGCAAGCAATCTTAACTaGCAAGCCACGTCTACGGAGGCCCCAGTGCTTGCCTGGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: HTHTHSQSEQASNLN*QATSTEAPVLAWLS Trigger: AGAAAGCCAGGCAAGCACTGGGGCCTCCGTAGACGTGGCTTGGCAGTTAAGATTGCTTGCTTGCTCGCTCTGAGAGTGTGTGTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR CCA 90 bp | TATAATACGCTCCCTGTATTCCTGGGTGAGGGCTGGACCATGGACTaGAGACCTGGCAGCTTTTGGGATGACAACGCTGGCAAAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: YNTLPVFLGEGWTMD*RPGSFWDDNAGKGS Trigger: AGACCCTTTGCCAGCGTTGTCATCCCAAAAGCTGCCAGGTCTCCAGTCCATGGTCCAGCCCTCACCCAGGAATACAGGGAGCGTATTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
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| 3UTR TCA 90 bp | TATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTGTCTCCTaGGGGCTGAGATTAAGAACACACCCAGCATACCCAGCTTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: YVGQAALELRDPPVS*GLRLRTHPAYPAFP Trigger: TGGAAAAGCTGGGTATGCTGGGTGTGTTCTTAATCTCAGCCCTCAGGAGACAGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR CCA 90 bp | AATCTTAACTGCCAAGCCACGTCTACGGAGGCCCCAGTGCTTGCCTaGCTTTCTGGGCCTTCTGTTTCTCTTGCCTCCATGCCTAACTTA | + |
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Preference number: 1 (lower is better) Translates to: NLNCQATSTEAPVLA*LSGPSVSLASMPNL Trigger: TAAGTTAGGCATGGAGGCAAGAGAAACAGAAGGCCCAGAAAGCCAGGCAAGCACTGGGGCCTCCGTAGACGTGGCTTGGCAGTTAAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR GCA 90 bp | ACACCCTACCTACGAGGACAAAAGGAGCCAGCACAGCCCAGGTACTaGCCTCCTACCACCCATCATGTATATAATACGCTCCCTGTATTC | + |
|
Preference number: 1 (lower is better) Translates to: TPYLRGQKEPAQPRY*PPTTHHVYNTLPVF Trigger: GAATACAGGGAGCGTATTATATACATGATGGGTGGTAGGAGGGCAGTACCTGGGCTGTGCTGGCTCCTTTTGTCCTCGTAGGTAGGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
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| 3UTR TCA 90 bp | GGAGACCTGGCAGCTTTTGGGATGACAACGCTGGCAAAGGGTCTATaGATCTATTTTGAAAGTGACTTATCTGGAGAGGTGCCTGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: GDLAAFGMTTLAKGL*IYFESDLSGEVPGV Trigger: TACTCCAGGCACCTCTCCAGATAAGTCACTTTCAAAATAGATTCATAGACCCTTTGCCAGCGTTGTCATCCCAAAAGCTGCCAGGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
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| 3UTR GCA 90 bp | GAAAGAAAGCCTAAGGAGTCAGTCTTTGGCATCGCCCACTCCATCTaGATTAATGGCAAACATAGCTTCAGCTTCAGGAAGACAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: ERKPKESVFGIAHSI*INGKHSFSFRKTGR Trigger: TCTCCCTGTCTTCCTGAAGCTGAAGCTATGTTTGCCATTAATGCAGATGGAGTGGGCGATGCCAAAGACTGACTCCTTAGGCTTTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
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| 3UTR TCA 90 bp | TACAGGAAACCTTTCAGATCAGATGTGTTTCTGCTACCAGAGAGCTaGTACAATAGTTGTTTTCCCGGAAGCCATGCGGGGCAGTCACAA | + |
|
Preference number: 1 (lower is better) Translates to: YRKPFRSDVFLLPES*YNSCFPGSHAGQSQ Trigger: TTGTGACTGCCCCGCATGGCTTCCGGGAAAACAACTATTGTATCAGCTCTCTGGTAGCAGAAACACATCTGATCTGAAAGGTTTCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR GCA 90 bp | TTATTAATAGACTCTACAGGAAACCTTTCAGATCAGATGTGTTTCTaGTACCAGAGAGCTGATACAATAGTTGTTTTCCCGGAAGCCATG | + |
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Preference number: 1 (lower is better) Translates to: LLIDSTGNLSDQMCF*YQRADTIVVFPEAM Trigger: CATGGCTTCCGGGAAAACAACTATTGTATCAGCTCTCTGGTAGCAGAAACACATCTGATCTGAAAGGTTTCCTGTAGAGTCTATTAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR GCA 90 bp | ATAACGAACAACACAGTACCGAAAGCTGTTATAGAAACCCTGTTTTaGAATATTCAGTTTGCACTAGAATATCTCCAGCAAATAACACAT | + |
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Preference number: 1 (lower is better) Translates to: ITNNTVPKAVIETLF*NIQFALEYLQQITH Trigger: ATGTGTTATTTGCTGGAGATATTCTAGTGCAAACTGAATATTGCAAAACAGGGTTTCTATAACAGCTTTCGGTACTGTGTTGTTCGTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAAGGCACTCCGAGCCGCCTCTCATGGGGACTGGGACTCAGACGCGGGTTTGGAAGAGCAGCAAGTaGTCTAAGCTGATAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: EVRHSEPPLMGTGTQTRVWKSSK*SKLISS Trigger: AGAGCTTATCAGCTTAGAGCACTTGCTGCTCTTCCA...AACCCGCGTCTGAGTCCCAGTCCCCATGAGAGGCGGCTCGGAGTGCCTTACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR TCA 90 bp | AATGTCACACCCTACCTACGAGGACAAAAGGAGCCAGCACAGCCCAGGTACTGCTGGCAGCTTTTGGGATaGCAACGCTGGCAAAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: NVTPYLRGQKEPAQPRYCWQLLG*QRWQRV Trigger: GACCCTTTGCCAGCGTTGTCATCCCAAAAGCTGCCA...GCAGTACCTGGGCTGTGCTGGCTCCTTTTGTCCTCGTAGGTAGGGTGTGACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCTCTTCTTGCTATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTGCTTGCCTGGCTTTCTaGGCCTTCTGTTTCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: TPSSCYVGQAALELRDPPACLAF*AFCFSC Trigger: GCAAGAGAAACAGAAGGCCCAGAAAGCCAGGCAAGC...AGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAGCAAGAAGAGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR TCA 90 bp | GTATATAATACGCTCCCTGTATTCCTGGGTGAGGGCTGGACCATGGACTGGAGAGACCCACCTGTCTCCTaGGGGCTGAGATTAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: VYNTLPVFLGEGWTMDWRDPPVS*GLRLRT Trigger: TGTTCTTAATCTCAGCCCTCAGGAGACAGGTGGGTC...TCTCCAGTCCATGGTCCAGCCCTCACCCAGGAATACAGGGAGCGTATTATATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
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| 3UTR-3UTR TCA 90 bp | TATATGCCTGAAGGAGGCCAGACTCAGTCTGAAGCTGAGGTAAGGCACTCCGAGCTGCTACCAGAGAGCTaGTACAATAGTTGTTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: YMPEGGQTQSEAEVRHSELLPES*YNSCFP Trigger: GGGAAAACAACTATTGTATCAGCTCTCTGGTAGCAG...CTCGGAGTGCCTTACCTCAGCTTCAGACTGAGTCTGGCCTCCTTCAGGCATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR CCA 90 bp | TATATGCCTGAAGGAGGCCAGACTCAGTCTGAAGCTGAGGTAAGGCACTCCGAGTTTGTTATCAGAGGCTaGAGAGATGGCTCAGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: YMPEGGQTQSEAEVRHSEFVIRG*RDGSVV Trigger: AACCACTGAGCCATCTCTCCAGCCTCTGATAACAAA...CTCGGAGTGCCTTACCTCAGCTTCAGACTGAGTCTGGCCTCCTTCAGGCATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGGTTATAGTTACTTGCTGCTCTTACAGAGCACCCATGTGGTGACTCAGAACTGCAGCGAACATGGCTaGTCCATCTACTTGGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SGYSYLLLLQSTHVVTQNCSEHG*SIYLGY Trigger: GTAGCCCAAGTAGATGGAGCAGCCATGTTCGCTGCA...GTTCTGAGTCACCACATGGGTGCTCTGTAAGAGCAGCAAGTAACTATAACCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGGTTATAGTTACTTGCTGCTCTTACAGAGCACCCATGTGGTGACTCAGAACCACAACATGAGCCTGTaGAGAAGCCCAGTACACAGT | + |
|
Preference number: 2 (lower is better) Translates to: SGYSYLLLLQSTHVVTQNHNMSL*RSPVHS Trigger: ACTGTGTACTGGGCTTCTTCACAGGCTCATGTTGTG...GTTCTGAGTCACCACATGGGTGCTCTGTAAGAGCAGCAAGTAACTATAACCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR TCA 90 bp | GTATATAATACGCTCCCTGTATTCCTGGGTGAGGGCTGGACCATGGACTGGAGATACAATGCAGTAACCTaGATGCTGGGCTTTCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: VYNTLPVFLGEGWTMDWRYNAVT*MLGFLS Trigger: TGAAAGAAAGCCCAGCATTCAGGTTACTGCATTGTA...TCTCCAGTCCATGGTCCAGCCCTCACCCAGGAATACAGGGAGCGTATTATATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
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| 3UTR-3UTR GCA 90 bp | ACCCCCTCTTCTTGCTATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTGCTTACCTATTCTATTaGTTTTCTCTCAAGCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: TPSSCYVGQAALELRDPPAYLFY*FSLKLE Trigger: TTCAAGCTTGAGAGAAAAGCAATAGAATAGGTAAGC...AGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAGCAAGAAGAGGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACTACTTTAGAAGTAAGTCCTTTGTGCAAATGTCATAATTTCCTCACAGAACCGAGCCGCCTCTCATaGGGACTGGGACTCAGACGC | + |
|
Preference number: 2 (lower is better) Translates to: LTTLEVSPLCKCHNFLTEPSRLS*GLGLRR Trigger: GCGTCTGAGTCCCAGTCCCCATGAGAGGCGGCTCGG...TTCTGTGAGGAAATTATGACATTTGCACAAAGGACTTACTTCTAAAGTAGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGCTTTTCCACCATAAATATTTGTTATCAGAGGCTGGAGAGATGGCTCAGCACAACATGAGCCTGTaGAGAAGCCCAGTACACAGT | + |
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Preference number: 2 (lower is better) Translates to: TQLFHHKYLLSEAGEMAQHNMSL*RSPVHS Trigger: ACTGTGTACTGGGCTTCTTCACAGGCTCATGTTGTG...CTGAGCCATCTCTCCAGCCTCTGATAACAAATATTTATGGTGGAAAAGCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTTGCTATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTGTCTCCGCTTACCTATTCTATTaGTTTTCTCTCAAGCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: SSCYVGQAALELRDPPVSAYLFY*FSLKLE Trigger: TTCAAGCTTGAGAGAAAAGCAATAGAATAGGTAAGC...GGAGACAGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAGCAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR GCA 90 bp | TCCACCATAAATATTTGTTATCAGAGGCTGGAGAGATGGCTCAGTGGTTATAGTCTATGTAGGCCAAGCTaGCCTGGAACTCAGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: STINICYQRLERWLSGYSLCRPS*PGTQRP Trigger: GGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAG...ACTATAACCACTGAGCCATCTCTCCAGCCTCTGATAACAAATATTTATGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR CCA 90 bp | GTTATCTGGAAGAGCAGCAAGTGCTCTAAGCTGATAAGCTCTCGATTCAGGACATACAGTAAACCAGCCTaGGGTTCTTATTCTTCGGCC | + |
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Preference number: 2 (lower is better) Translates to: VIWKSSKCSKLISSRFRTYSKPA*GSYSSA Trigger: GGCCGAAGAATAAGAACCCCAGGCTGGTTTACTGTA...TGTCCTGAATCGAGAGCTTATCAGCTTAGAGCACTTGCTGCTCTTCCAGATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR TCA 90 bp | TCCACCATAAATATTTGTTATCAGAGGCTGGAGAGATGGCTCAGTGGTTATAGTGACCCACCTGTCTCCTaGGGGCTGAGATTAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: STINICYQRLERWLSGYSDPPVS*GLRLRT Trigger: TGTTCTTAATCTCAGCCCTCAGGAGACAGGTGGGTC...ACTATAACCACTGAGCCATCTCTCCAGCCTCTGATAACAAATATTTATGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGGTTATAGTTACTTGCTGCTCTTACAGAGCACCCATGTGGTGACTCAGAACTACAATGCAGTAACCTaGATGCTGGGCTTTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SGYSYLLLLQSTHVVTQNYNAVT*MLGFLS Trigger: TGAAAGAAAGCCCAGCATTCAGGTTACTGCATTGTA...GTTCTGAGTCACCACATGGGTGCTCTGTAAGAGCAGCAAGTAACTATAACCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACTACTTTAGAAGTAAGTCCTTTGTGCAAATGTCATAATTTCCTCACAGAAGCCCCAGTGCTTGCCTaGCTTTCTGGGCCTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LTTLEVSPLCKCHNFLTEAPVLA*LSGPSV Trigger: AACAGAAGGCCCAGAAAGCCAGGCAAGCACTGGGGC...TTCTGTGAGGAAATTATGACATTTGCACAAAGGACTTACTTCTAAAGTAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTGCACACAACTACTTTATTAGCAGCAGAACAAATTTCCTTAAGTGAAGTCGATCTGCAGCGAACATaGCTGCTCCATCTACTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLHTTTLLAAEQISLSEVDLQRT*LLHLLG Trigger: CCCAAGTAGATGGAGCAGCCATGTTCGCTGCAGATC...GACTTCACTTAAGGAAATTTGTTCTGCTGCTAATAAAGTAGTTGTGTGCAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
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| 3UTR-3UTR CCA 90 bp | GTACCGAAAGCTGTTATAGAAACCCTGTTTTGCAATATTCAGTTTGCACTAGAAGCTGCTCCATCTACTTaGGCTACTACCTGGTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: VPKAVIETLFCNIQFALEAAPST*ATTWLV Trigger: CACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGC...TTCTAGTGCAAACTGAATATTGCAAAACAGGGTTTCTATAACAGCTTTCGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTGCACTAGAATATCTCCAGCAAATAACACATCCACTGCACACAACTACTTTCCAGTTTACTTCTCCTaGAGACAAAAGACTGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VCTRISPANNTSTAHNYFPVYFS*RQKTAP Trigger: TGGGGCAGTCTTTTGTCTTCAGGAGAAGTAAACTGG...AAAGTAGTTGTGTGCAGTGGATGTGTTATTTGCTGGAGATATTCTAGTGCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAATATTTGTTATCAGAGGCTGGAGAGATGGCTCAGTGGTTATAGTTACTTGGCAAGCAATCTTAACTaGCAAGCCACGTCTACGGAG | + |
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Preference number: 2 (lower is better) Translates to: INICYQRLERWLSGYSYLASNLN*QATSTE Trigger: CTCCGTAGACGTGGCTTGGCAGTTAAGATTGCTTGC...CAAGTAACTATAACCACTGAGCCATCTCTCCAGCCTCTGATAACAAATATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR GCA 90 bp | TCCACCATAAATATTTGTTATCAGAGGCTGGAGAGATGGCTCAGTGGTTATAGTGTGGTTATAGTTACTTaGTGCTCTTACAGAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: STINICYQRLERWLSGYSVVIVT*CSYRAP Trigger: GGGTGCTCTGTAAGAGCAGCAAGTAACTATAACCAC...ACTATAACCACTGAGCCATCTCTCCAGCCTCTGATAACAAATATTTATGGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTATTGTCCTTTAATGTCACACCCTACCTACGAGGACAAAAGGAGCCAGCACATATTTGATGACTTCTaGGTAGCATACACATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: IYCPLMSHPTYEDKRSQHIFDDF*VAYTWC Trigger: ACACCATGTGTATGCTACTCAGAAGTCATCAAATAT...GTGCTGGCTCCTTTTGTCCTCGTAGGTAGGGTGTGACATTAAAGGACAATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
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| 3UTR-3UTR GCA 90 bp | TATTCAGTTTGCACTAGAATATCTCCAGCAAATAACACATCCACTGCACACAACGAGAGTCATAGATTTTaGAGATTCTGGTCTCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: YSVCTRISPANNTSTAHNESHRF*RFWSPL Trigger: GAGGGGAGACCAGAATCTGCAAAATCTATGACTCTC...GTTGTGTGCAGTGGATGTGTTATTTGCTGGAGATATTCTAGTGCAAACTGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAATATTTGTTATCAGAGGCTGGAGAGATGGCTCAGTGGTTATAGTTACTTGCTGCTACCAGAGAGCTaGTACAATAGTTGTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: INICYQRLERWLSGYSYLLLPES*YNSCFP Trigger: GGGAAAACAACTATTGTATCAGCTCTCTGGTAGCAG...CAAGTAACTATAACCACTGAGCCATCTCTCCAGCCTCTGATAACAAATATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR CCA 72 bp | TGCCAAGCCACGTCTACGGAGGCCCCAGTGCTTGCCTaGCTTTCTGGGCCTTCTGTTTCTCTTGCCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: CQATSTEAPVLA*LSGPSVSLASM Trigger: CATGGAGGCAAGAGAAACAGAAGGCCCAGAAAGCCAGGCAAGCACTGGGGCCTCCGTAGACGTGGCTTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR CCA 72 bp | CTCCCTGTATTCCTGGGTGAGGGCTGGACCATGGACTaGAGACCTGGCAGCTTTTGGGATGACAACGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LPVFLGEGWTMD*RPGSFWDDNAG Trigger: GCCAGCGTTGTCATCCCAAAAGCTGCCAGGTCTCCAGTCCATGGTCCAGCCCTCACCCAGGAATACAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
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| 3UTR-3UTR CAA 90 bp | ACCCCCTCTTCTTGCTATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTGGCTGCTCCATCTACTaGGGCTACTACCTGGTTGGT | + |
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Preference number: 3 (lower is better) Translates to: TPSSCYVGQAALELRDPPGCSIY*GYYLVG Trigger: ACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGCC...AGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAGCAAGAAGAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
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| 3UTR-3UTR CAA 90 bp | CACGTCTACGGAGGCCCCAGTGCTTGCCTGGCTTTCTGGGCCTTCTGTTTCTCTCTAAGGAGTCAGTCTTaGGCATCGCCCACTCCATCT | + |
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Preference number: 3 (lower is better) Translates to: HVYGGPSACLAFWAFCFSLRSQS*ASPTPS Trigger: AGATGGAGTGGGCGATGCCAAAGACTGACTCCTTAG...AGAGAAACAGAAGGCCCAGAAAGCCAGGCAAGCACTGGGGCCTCCGTAGACGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
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| 3UTR GCA 72 bp | ACACACTCTCAGAGCGAGCAAGCAAGCAATCTTAACTaGCAAGCCACGTCTACGGAGGCCCCAGTGCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: THSQSEQASNLN*QATSTEAPVLA Trigger: GGCAAGCACTGGGGCCTCCGTAGACGTGGCTTGGCAGTTAAGATTGCTTGCTTGCTCGCTCTGAGAGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR TCA 72 bp | TTGTTTTCCCGGAAGCCATGCGGGGCAGTCACAACATaGGCCTGTGAAGAAGCCCAGTACACAGTCCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LFSRKPCGAVTT*ACEEAQYTVLS Trigger: GGAGAGGACTGTGTACTGGGCTTCTTCACAGGCTCATGTTGTGACTGCCCCGCATGGCTTCCGGGAAAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| 3UTR TCA 72 bp | CAAGCTGCCCTGGAACTCAGAGACCCACCTGTCTCCTaGGGGCTGAGATTAAGAACACACCCAGCATACCCA | + |
|
Preference number: 3 (lower is better) Translates to: QAALELRDPPVS*GLRLRTHPAYP Trigger: TGGGTATGCTGGGTGTGTTCTTAATCTCAGCCCTCAGGAGACAGGTGGGTCTCTGAGTTCCAGGGCAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR GCA 72 bp | ATCTTAACTGCCAAGCCACGTCTACGGAGGCCCCAGTaGTTGCCTGGCTTTCTGGGCCTTCTGTTTCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ILTAKPRLRRPQ*LPGFLGLLFLL Trigger: CAAGAGAAACAGAAGGCCCAGAAAGCCAGGCAAGCACTGGGGCCTCCGTAGACGTGGCTTGGCAGTTAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTATCTGGAAGAGCAGCAAGTGCTCTAAGCTGATAAGCTCTCGATTCAGGACACGGAGGCCCCAGTGCTaGCCTGGCTTTCTGGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VIWKSSKCSKLISSRFRTRRPQC*PGFLGL Trigger: AAGGCCCAGAAAGCCAGGCAAGCACTGGGGCCTCCG...TGTCCTGAATCGAGAGCTTATCAGCTTAGAGCACTTGCTGCTCTTCCAGATAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR-3UTR CAA 90 bp | TATATGCCTGAAGGAGGCCAGACTCAGTCTGAAGCTGAGGTAAGGCACTCCGAGAGTGACCCCCTCTTCTaGCTATGTAGGCCAAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: YMPEGGQTQSEAEVRHSESDPLF*LCRPSC Trigger: GCAGCTTGGCCTACATAGCAAGAAGAGGGGGTCACT...CTCGGAGTGCCTTACCTCAGCTTCAGACTGAGTCTGGCCTCCTTCAGGCATATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR CCA 72 bp | CCTCTCATGGGGACTGGGACTCAGACGCGGGTTATCTaGAAGAGCAGCAAGTGCTCTAAGCTGATAAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLMGTGTQTRVI*KSSKCSKLISS Trigger: AGAGCTTATCAGCTTAGAGCACTTGCTGCTCTTCCAGATAACCCGCGTCTGAGTCCCAGTCCCCATGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR TCA 72 bp | CTCCCCTCTTCCTTTTCTCAGGTACAGCCTGGTGGTTaGCGCATGAGCGATGATGTTCCCTCCAATGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPSSFSQVQPGG*RMSDDVPSNGF Trigger: AAACCCATTGGAGGGAACATCATCGCTCATGCGTCAACCACCAGGCTGTACCTGAGAAAAGGAAGAGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
||
| 3UTR GCA 72 bp | CTACGAGGACAAAAGGAGCCAGCACAGCCCAGGTACTaGCCTCCTACCACCCATCATGTATATAATACGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRGQKEPAQPRY*PPTTHHVYNTL Trigger: GAGCGTATTATATACATGATGGGTGGTAGGAGGGCAGTACCTGGGCTGTGCTGGCTCCTTTTGTCCTCGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCCTCTTCTTGCTATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTTTCCACCATAAATATTaGTTATCAGAGGCTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TPSSCYVGQAALELRDPPFHHKY*LSEAGE Trigger: CTCTCCAGCCTCTGATAACAAATATTTATGGTGGAA...AGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAGCAAGAAGAGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR TCA 72 bp | CTGGACCATGGACTGGAGACCTGGCAGCTTTTGGGATaGCAACGCTGGCAAAGGGTCTATGAATCTATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LDHGLETWQLLG*QRWQRVYESIL Trigger: CAAAATAGATTCATAGACCCTTTGCCAGCGTTGTCATCCCAAAAGCTGCCAGGTCTCCAGTCCATGGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| 3UTR-3UTR CAA 90 bp | TATATGCCTGAAGGAGGCCAGACTCAGTCTGAAGCTGAGGTAAGGCACTCCGAGCACAGAATAAAACCTTaGTTTACACAAAGGTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: YMPEGGQTQSEAEVRHSEHRIKP*FTQRSP Trigger: GGGGGACCTTTGTGTAAACAAAGGTTTTATTCTGTG...CTCGGAGTGCCTTACCTCAGCTTCAGACTGAGTCTGGCCTCCTTCAGGCATATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR TCA 72 bp | CCTTTCAGATCAGATGTGTTTCTGCTACCAGAGAGCTaGTACAATAGTTGTTTTCCCGGAAGCCATGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PFRSDVFLLPES*YNSCFPGSHAG Trigger: CCCCGCATGGCTTCCGGGAAAACAACTATTGTATCAGCTCTCTGGTAGCAGAAACACATCTGATCTGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR GCA 72 bp | CCTAAGGAGTCAGTCTTTGGCATCGCCCACTCCATCTaGATTAATGGCAAACATAGCTTCAGCTTCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PKESVFGIAHSI*INGKHSFSFRK Trigger: CTTCCTGAAGCTGAAGCTATGTTTGCCATTAATGCAGATGGAGTGGGCGATGCCAAAGACTGACTCCTTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
||
| 3UTR TCA 72 bp | AGTGAGAGTACTCGGATCTTTCCAGTTTACTTCTCCTaGAGACAAAAGACTGCCCCACACCTGCTATTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SESTRIFPVYFS*RQKTAPHLLFH Trigger: ATGAAATAGCAGGTGTGGGGCAGTCTTTTGTCTTCAGGAGAAGTAAACTGGAAAGATCCGAGTACTCTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR CCA 72 bp | AAACAAAGACCACAGGAAAGATACAGTAAACCAGCCTaGGGTTCTTATTCTTCGGCCAAAGGCTACAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: KQRPQERYSKPA*GSYSSAKGYNA Trigger: TGCATTGTAGCCTTTGGCCGAAGAATAAGAACCCCAGGCTGGTTTACTGTATCTTTCCTGTGGTCTTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTCAGTTTGCACTAGAATATCTCCAGCAAATAACACATCCACTGCACACAACCCTCCAATGGGTTTTTaGGGATCTGCAGCGAACATG | + |
|
Preference number: 3 (lower is better) Translates to: YSVCTRISPANNTSTAHNPPMGF*GSAANM Trigger: CATGTTCGCTGCAGATCCCAAAAAACCCATTGGAGG...GTTGTGTGCAGTGGATGTGTTATTTGCTGGAGATATTCTAGTGCAAACTGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
||
| 3UTR TCA 72 bp | CACTTACAGATCCTCAGGCATTTAGTTTACCATCCTTaGGAAGTGAGAGTACTCGGATCTTTCCAGTTTACT | + |
|
Preference number: 3 (lower is better) Translates to: HLQILRHLVYHP*EVRVLGSFQFT Trigger: AGTAAACTGGAAAGATCCGAGTACTCTCACTTCTCAAGGATGGTAAACTAAATGCCTGAGGATCTGTAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR-3UTR CAA 90 bp | GTACCGAAAGCTGTTATAGAAACCCTGTTTTGCAATATTCAGTTTGCACTAGAATTTAGTTTACCATCCTaGAGAAGTGAGAGTACTCGG | + |
|
Preference number: 3 (lower is better) Translates to: VPKAVIETLFCNIQFALEFSLPS*RSESTR Trigger: CCGAGTACTCTCACTTCTCAAGGATGGTAAACTAAA...TTCTAGTGCAAACTGAATATTGCAAAACAGGGTTTCTATAACAGCTTTCGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCACTACTTTAGAAGTAAGTCCTTTGTGCAAATGTCATAATTTCCTCACAGAATTTAGTTTACCATCCTaGAGAAGTGAGAGTACTCGG | + |
|
Preference number: 3 (lower is better) Translates to: LTTLEVSPLCKCHNFLTEFSLPS*RSESTR Trigger: CCGAGTACTCTCACTTCTCAAGGATGGTAAACTAAA...TTCTGTGAGGAAATTATGACATTTGCACAAAGGACTTACTTCTAAAGTAGTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR GCA 72 bp | AACACAGTACCGAAAGCTGTTATAGAAACCCTGTTTTaGAATATTCAGTTTGCACTAGAATATCTCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NTVPKAVIETLF*NIQFALEYLQQ Trigger: TTGCTGGAGATATTCTAGTGCAAACTGAATATTGCAAAACAGGGTTTCTATAACAGCTTTCGGTACTGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR GCA 72 bp | AGCTGTTATAGAAACCCTGTTTTGCAATATTCAGTTTaGACTAGAATATCTCCAGCAAATAACACATCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SCYRNPVLQYSV*TRISPANNTST Trigger: AGTGGATGTGTTATTTGCTGGAGATATTCTAGTGCAAACTGAATATTGCAAAACAGGGTTTCTATAACAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CCA 90 bp | GAGGTAAGGCACTCCGAGCCGCCTCTCATGGGGACTGGGACTCAGACGCGGGTTCGTGGTGAAACCCATTaGAACCAATTTTGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVRHSEPPLMGTGTQTRVRGETH*NQFCCL Trigger: GAGGCAGCAAAATTGGTTCCAATGGGTTTCACCACG...AACCCGCGTCTGAGTCCCAGTCCCCATGAGAGGCGGCTCGGAGTGCCTTACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CCA 90 bp | GCCACGTCTACGGAGGCCCCAGTGCTTGCCTGGCTTTCTGGGCCTTCTGTTTCTCGGTGTCAATGTACATaGCCTTCCCTTCACCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATSTEAPVLAWLSGPSVSRCQCT*PSLHLH Trigger: GTGGAGGTGAAGGGAAGGCCATGTACATTGACACCG...AGAAACAGAAGGCCCAGAAAGCCAGGCAAGCACTGGGGCCTCCGTAGACGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTGCTATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTGTCTCCAGGAGCTGGGTCTGGTaGTCTGTGTTGAACCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSCYVGQAALELRDPPVSRSWVW*SVLNPR Trigger: GCGAGGGTTCAACACAGACCACCAGACCCAGCTCCT...GGAGACAGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAGCAAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR TCA 90 bp | CACGTCTACGGAGGCCCCAGTGCTTGCCTGGCTTTCTGGGCCTTCTGTTTCTCTACTCAGTTGCCGTGGTaGAACCCATTGGAACCAATT | + |
|
Preference number: 4 (lower is better) Translates to: HVYGGPSACLAFWAFCFSTQLPW*NPLEPI Trigger: AATTGGTTCCAATGGGTTTCACCACGGCAACTGAGT...AGAGAAACAGAAGGCCCAGAAAGCCAGGCAAGCACTGGGGCCTCCGTAGACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR TCA 90 bp | TATATGCCTGAAGGAGGCCAGACTCAGTCTGAAGCTGAGGTAAGGCACTCCGAGAAGCTCTCCCCGCCCTaGGTAGTCTGTTCTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YMPEGGQTQSEAEVRHSEKLSPP*VVCSVK Trigger: CTTTACAGAACAGACTACTCAGGGCGGGGAGAGCTT...CTCGGAGTGCCTTACCTCAGCTTCAGACTGAGTCTGGCCTCCTTCAGGCATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR GCA 90 bp | CACGTCTACGGAGGCCCCAGTGCTTGCCTGGCTTTCTGGGCCTTCTGTTTCTCTCATCATTGGCATTTATaGCACACTGCTCTAACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HVYGGPSACLAFWAFCFSHHWHL*HTALTV Trigger: CACGGTTAGAGCAGTGTGGCATAAATGCCAATGATG...AGAGAAACAGAAGGCCCAGAAAGCCAGGCAAGCACTGGGGCCTCCGTAGACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCCTCTTCTTGCTATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTACTGCGACACCAAACTaGATTCTACCATCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSSCYVGQAALELRDPPTATPN*ILPSWL Trigger: CAGCCATGATGGTAGAATCCAGTTTGGTGTCGCAGT...AGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAGCAAGAAGAGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
||
| CDS-3UTR GCA 90 bp | AGCCATGCGGGGCAGTCACAACATGAGCCTGTGAAGAAGCCCAGTACACAGTCCAGAAATCTGGCCAAATaGATTTGCCTGGCTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHAGQSQHEPVKKPSTQSRNLAK*ICLAES Trigger: GCTTTCAGCCAGGCAAATGCATTTGGCCAGATTTCT...GGACTGTGTACTGGGCTTCTTCACAGGCTCATGTTGTGACTGCCCCGCATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR CCA 90 bp | GTATATAATACGCTCCCTGTATTCCTGGGTGAGGGCTGGACCATGGACTGGAGAGCTGCTCCATCTACTTaGGCTACTACCTGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VYNTLPVFLGEGWTMDWRAAPST*ATTWLV Trigger: CACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGC...TCTCCAGTCCATGGTCCAGCCCTCACCCAGGAATACAGGGAGCGTATTATATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR GCA 90 bp | TCTTCTTGCTATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTGTCTCCATCGCCCACTCCATCTaGATTAATGGCAAACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSCYVGQAALELRDPPVSIAHSI*INGKHS Trigger: GCTATGTTTGCCATTAATGCAGATGGAGTGGGCGAT...GGAGACAGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAGCAAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR TCA 90 bp | TCTTCTTGCTATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTGTCTCCACTTTCTTCTTCCACTaGAGTATCTGCACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSCYVGQAALELRDPPVSTFFFH*SICTCF Trigger: GAAGCAAGTGCAGATACTTCAGTGGAAGAAGAAAGT...GGAGACAGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAGCAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR TCA 90 bp | ACACACTCTCAGAGCGAGCAAGCAAGCAATCTTAACTGCCAAGCCACGTCTACGACTCAGTTGCCGTGGTaGAACCCATTGGAACCAATT | + |
|
Preference number: 4 (lower is better) Translates to: THSQSEQASNLNCQATSTTQLPW*NPLEPI Trigger: AATTGGTTCCAATGGGTTTCACCACGGCAACTGAGT...CGTAGACGTGGCTTGGCAGTTAAGATTGCTTGCTTGCTCGCTCTGAGAGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR GCA 90 bp | TATATGCCTGAAGGAGGCCAGACTCAGTCTGAAGCTGAGGTAAGGCACTCCGAGGAGAGTCATAGATTTTaGAGATTCTGGTCTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YMPEGGQTQSEAEVRHSEESHRF*RFWSPL Trigger: GAGGGGAGACCAGAATCTGCAAAATCTATGACTCTC...CTCGGAGTGCCTTACCTCAGCTTCAGACTGAGTCTGGCCTCCTTCAGGCATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR CCA 90 bp | TGCAGTAACCTGAATGCTGGGCTTTCTTTCAGGTTCACACTTTACAACTGCAGCCGGTCAATGGGGAGCTaGCATGTAACAGCCAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSNLNAGLSFRFTLYNCSRSMGS*HVTANV Trigger: TACGTTGGCTGTTACATGCCAGCTCCCCATTGACCG...GCTGCAGTTGTAAAGTGTGAACCTGAAAGAAAGCCCAGCATTCAGGTTACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CCA 90 bp | GTTATCTGGAAGAGCAGCAAGTGCTCTAAGCTGATAAGCTCTCGATTCAGGACAGATCTGCAGCGAACATaGCTGCTCCATCTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VIWKSSKCSKLISSRFRTDLQRT*LLHLLG Trigger: CCCAAGTAGATGGAGCAGCCATGTTCGCTGCAGATC...TGTCCTGAATCGAGAGCTTATCAGCTTAGAGCACTTGCTGCTCTTCCAGATAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR TCA 90 bp | TGCAGTAACCTGAATGCTGGGCTTTCTTTCAGGTTCACACTTTACAACTGCAGCTTCTACCATCATGGCTaGCGCTTGGTAAAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSNLNAGLSFRFTLYNCSFYHHG*RLVKEL Trigger: CAGCTCCTTTACCAAGCGTCAGCCATGATGGTAGAA...GCTGCAGTTGTAAAGTGTGAACCTGAAAGAAAGCCCAGCATTCAGGTTACTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR GCA 90 bp | ATTTATTGTCCTTTAATGTCACACCCTACCTACGAGGACAAAAGGAGCCAGCACCTGGTGAAACTCAGTTaGCGTGGTGAAACCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYCPLMSHPTYEDKRSQHLVKLS*RGETHW Trigger: CCAATGGGTTTCACCACGGCAACTGAGTTTCACCAG...GTGCTGGCTCCTTTTGTCCTCGTAGGTAGGGTGTGACATTAAAGGACAATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR GCA 90 bp | TGCAGTAACCTGAATGCTGGGCTTTCTTTCAGGTTCACACTTTACAACTGCAGCCATCATTGGCATTTATaGCACACTGCTCTAACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSNLNAGLSFRFTLYNCSHHWHL*HTALTV Trigger: CACGGTTAGAGCAGTGTGGCATAAATGCCAATGATG...GCTGCAGTTGTAAAGTGTGAACCTGAAAGAAAGCCCAGCATTCAGGTTACTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CCA 90 bp | CAACGCTGGCAAAGGGTCTATGAATCTATTTTGAAAGTGACTTATCTGGAGAGGACTTGGGCTACTACCTaGTTGGTGATTACCACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QRWQRVYESILKVTYLERTWATT*LVITTA Trigger: CGCAGTGGTAATCACCAACCAGGTAGTAGCCCAAGT...CCTCTCCAGATAAGTCACTTTCAAAATAGATTCATAGACCCTTTGCCAGCGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| 3UTR CAA 72 bp | CACACCCAGCATACCCAGCTTTTCCACCATAAATATTaGTTATCAGAGGCTGGAGAGATGGCTCAGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HTQHTQLFHHKY*LSEAGEMAQWL Trigger: TAACCACTGAGCCATCTCTCCAGCCTCTGATAACAAATATTTATGGTGGAAAAGCTGGGTATGCTGGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR TCA 90 bp | CCACTGCACACAACTACTTTATTAGCAGCAGAACAAATTTCCTTAAGTGAAGTCTCTGGTGGTCTGTGTTaGACCCTCGCGCATATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLHTTTLLAAEQISLSEVSGGLC*TLAHML Trigger: TAGCATATGCGCGAGGGTTCAACACAGACCACCAGA...GACTTCACTTAAGGAAATTTGTTCTGCTGCTAATAAAGTAGTTGTGTGCAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTTATTAATAGACTCTACAGGAAACCTTTCAGATCAGATGTGTTTCTGCTAAGGAGCTGGGTCTGGTaGTCTGTGTTGAACCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SVINRLYRKPFRSDVFLLRSWVW*SVLNPR Trigger: GCGAGGGTTCAACACAGACCACCAGACCCAGCTCCT...TAGCAGAAACACATCTGATCTGAAAGGTTTCCTGTAGAGTCTATTAATAACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CCA 90 bp | TATGAATCTATTTTGAAAGTGACTTATCTGGAGAGGTGCCTGGAGTATTTTTGGCCAAATGCATTTGCCTaGCTGAAAGCTCTCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YESILKVTYLERCLEYFWPNAFA*LKALPA Trigger: GGCGGGGAGAGCTTTCAGCCAGGCAAATGCATTTGG...CCAAAAATACTCCAGGCACCTCTCCAGATAAGTCACTTTCAAAATAGATTCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCTCTTGCCTCCATGCCTAACTTAAGAACTAGGACGGATTCTCCATCTACTTTCTTCTTCCACTaGAGTATCTGCACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSLASMPNLRTRTDSPSTFFFH*SICTCF Trigger: GAAGCAAGTGCAGATACTTCAGTGGAAGAAGAAAGT...AGATGGAGAATCCGTCCTAGTTCTTAAGTTAGGCATGGAGGCAAGAGAAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR TCA 90 bp | TATTCAGTTTGCACTAGAATATCTCCAGCAAATAACACATCCACTGCACACAACGTCTCAATTCCACCTTaGAGCAGCTTGTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSVCTRISPANNTSTAHNVSIPP*SSLSSS Trigger: AGAGCTGGACAAGCTGCTTCAAGGTGGAATTGAGAC...GTTGTGTGCAGTGGATGTGTTATTTGCTGGAGATATTCTAGTGCAAACTGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR TCA 90 bp | GTACCGAAAGCTGTTATAGAAACCCTGTTTTGCAATATTCAGTTTGCACTAGAATCTGGTGGTCTGTGTTaGACCCTCGCGCATATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VPKAVIETLFCNIQFALESGGLC*TLAHML Trigger: TAGCATATGCGCGAGGGTTCAACACAGACCACCAGA...TTCTAGTGCAAACTGAATATTGCAAAACAGGGTTTCTATAACAGCTTTCGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR TCA 90 bp | TATTCAGTTTGCACTAGAATATCTCCAGCAAATAACACATCCACTGCACACAACTTCTACCATCATGGCTaGCGCTTGGTAAAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSVCTRISPANNTSTAHNFYHHG*RLVKEL Trigger: CAGCTCCTTTACCAAGCGTCAGCCATGATGGTAGAA...GTTGTGTGCAGTGGATGTGTTATTTGCTGGAGATATTCTAGTGCAAACTGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGCACTAGAATATCTCCAGCAAATAACACATCCACTGCACACAACTACTTTCTGGTGAAACTCAGTTaGCGTGGTGAAACCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCTRISPANNTSTAHNYFLVKLS*RGETHW Trigger: CCAATGGGTTTCACCACGGCAACTGAGTTTCACCAG...AAAGTAGTTGTGTGCAGTGGATGTGTTATTTGCTGGAGATATTCTAGTGCAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAATGCTGGGCTTTCTTTCAGGTTCACACTTTACAACTGCAGCTGACCATAGTCTACAATAAGCAGTaGATACCTGGATTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PECWAFFQVHTLQLQLTIVYNKQ*IPGFYH Trigger: ATGGTAGAATCCAGGTATGCACTGCTTATTGTAGAC...TATGGTCAGCTGCAGTTGTAAAGTGTGAACCTGAAAGAAAGCCCAGCATTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR CCA 90 bp | GTACCGAAAGCTGTTATAGAAACCCTGTTTTGCAATATTCAGTTTGCACTAGAACGGTCAATGGGGAGCTaGCATGTAACAGCCAACGTA | + |
|
Preference number: 4 (lower is better) Translates to: VPKAVIETLFCNIQFALERSMGS*HVTANV Trigger: TACGTTGGCTGTTACATGCCAGCTCCCCATTGACCG...TTCTAGTGCAAACTGAATATTGCAAAACAGGGTTTCTATAACAGCTTTCGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR GCA 90 bp | TCCACCATAAATATTTGTTATCAGAGGCTGGAGAGATGGCTCAGTGGTTATAGTGCATTTATGCCACACTaGTCTAACCGTGAAATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STINICYQRLERWLSGYSAFMPH*SNREIG Trigger: GCCTATTTCACGGTTAGAGCAGTGTGGCATAAATGC...ACTATAACCACTGAGCCATCTCTCCAGCCTCTGATAACAAATATTTATGGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR GCA 90 bp | CTCACTACTTTAGAAGTAAGTCCTTTGTGCAAATGTCATAATTTCCTCACAGAACTGGCCAAATGCATTTaGCTGGCTGAAAGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTTLEVSPLCKCHNFLTELAKCI*LAESSP Trigger: GGGAGAGCTTTCAGCCAGGCAAATGCATTTGGCCAG...TTCTGTGAGGAAATTATGACATTTGCACAAAGGACTTACTTCTAAAGTAGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR CCA 90 bp | CTCACTACTTTAGAAGTAAGTCCTTTGTGCAAATGTCATAATTTCCTCACAGAACGGTGTCAATGTACATaGCCTTCCCTTCACCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTTLEVSPLCKCHNFLTERCQCT*PSLHLH Trigger: GTGGAGGTGAAGGGAAGGCCATGTACATTGACACCG...TTCTGTGAGGAAATTATGACATTTGCACAAAGGACTTACTTCTAAAGTAGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTTATTAATAGACTCTACAGGAAACCTTTCAGATCAGATGTGTTTCTGCTACGTGGTGAAACCCATTaGAACCAATTTTGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVINRLYRKPFRSDVFLLRGETH*NQFCCL Trigger: GAGGCAGCAAAATTGGTTCCAATGGGTTTCACCACG...TAGCAGAAACACATCTGATCTGAAAGGTTTCCTGTAGAGTCTATTAATAACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR GCA 90 bp | CTCACTACTTTAGAAGTAAGTCCTTTGTGCAAATGTCATAATTTCCTCACAGAAGCATTTATGCCACACTaGTCTAACCGTGAAATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTTLEVSPLCKCHNFLTEAFMPH*SNREIG Trigger: GCCTATTTCACGGTTAGAGCAGTGTGGCATAAATGC...TTCTGTGAGGAAATTATGACATTTGCACAAAGGACTTACTTCTAAAGTAGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| 3UTR CAA 72 bp | CAACACAGTACCGAAAGCTGTTATAGAAACCCTGTTTaGCAATATTCAGTTTGCACTAGAATATCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHSTESCYRNPV*QYSVCTRISPA Trigger: TGCTGGAGATATTCTAGTGCAAACTGAATATTGCAAAACAGGGTTTCTATAACAGCTTTCGGTACTGTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGCACTAGAATATCTCCAGCAAATAACACATCCACTGCACACAACTACTTTCATTGGAACCAATTTTaGTGCCTCAGTCAGAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCTRISPANNTSTAHNYFHWNQF*CLSQNF Trigger: AAAATTCTGACTGAGGCAGCAAAATTGGTTCCAATG...AAAGTAGTTGTGTGCAGTGGATGTGTTATTTGCTGGAGATATTCTAGTGCAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CCA 90 bp | TATTCAGTTTGCACTAGAATATCTCCAGCAAATAACACATCCACTGCACACAACATTTCTTCACATCATTaGCATTTATGCCACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSVCTRISPANNTSTAHNISSHH*HLCHTA Trigger: AGCAGTGTGGCATAAATGCCAATGATGTGAAGAAAT...GTTGTGTGCAGTGGATGTGTTATTTGCTGGAGATATTCTAGTGCAAACTGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCCTCTTCTTGCTATGTAGGCCAAGCTGCCCTGGAACTCAGAGACCCACCTGTCTGGTGGTCTGTGTaGAACCCTCGCGCATATGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPSSCYVGQAALELRDPPVWWSV*NPRAYA Trigger: AGCATATGCGCGAGGGTTCAACACAGACCACCAGAC...AGGTGGGTCTCTGAGTTCCAGGGCAGCTTGGCCTACATAGCAAGAAGAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS TCA 90 bp | TCATGGCTGACGCTTGGTAAAGGAGCTGGGTCTGGTGGTCTGTGTTaGACCCTCGCGCATATGCTACATTATCTAGGACATCGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SWLTLGKGAGSGGLC*TLAHMLHYLGHRCQ Trigger: CTGGCAGCGATGTCCTAGATAATGTAGCATATGCGCGAGGGTTCAACACAGACCACCAGACCCAGCTCCTTTACCAAGCGTCAGCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 ENSMUST00000152327.8 |
||
| CDS CCA 90 bp | CGACACCAAACTCATCAGCAAGTCGAAGCAGCATCCTCAGAAATCTaGCCAAATGCATTTGCCTGGCTGAAAGCTCTCCCCGCCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RHQTHQQVEAASSEI*PNAFAWLKALPALS Trigger: ACTCAGGGCGGGGAGAGCTTTCAGCCAGGCAAATGCATTTGGCCAGATTTCTGAGGATGCTGCTTCGACTTGCTGATGAGTTTGGTGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
||
| CDS-3UTR CAA 90 bp | AATGTCACACCCTACCTACGAGGACAAAAGGAGCCAGCACAGCCCAGGTACTGCCCTCCAATGGGTTTTTaGGGATCTGCAGCGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: NVTPYLRGQKEPAQPRYCPPMGF*GSAANM Trigger: CATGTTCGCTGCAGATCCCAAAAAACCCATTGGAGG...GCAGTACCTGGGCTGTGCTGGCTCCTTTTGTCCTCGTAGGTAGGGTGTGACATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS TCA 90 bp | CAGCTTGTCCAGCTCTTTGGAGCCAGTAGTTATCTGTATGATCTCTaGCCGGCGCTGGTGAAACTCAGTTGCCGTGGTGAAACCCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLVQLFGASSYLYDL*PALVKLSCRGETHW Trigger: CCAATGGGTTTCACCACGGCAACTGAGTTTCACCAGCGCCGGTCAGAGATCATACAGATAACTACTGGCTCCAAAGAGCTGGACAAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028795.10 ENSMUST00000140939.8 ENSMUST00000152327.8 |
||
| CDS TCA 90 bp | CAGCGAACATGGCTGCTCCATCTACTTGGGCTACTACCTGGTTGGTaGTTACCACTGCGACACCAAACTCATCAGCAAGTCGAAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRTWLLHLLGLLPGW*LPLRHQTHQQVEAA Trigger: TGCTGCTTCGACTTGCTGATGAGTTTGGTGTCGCAGTGGTAATCACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGCCATGTTCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
||
| CDS CCA 90 bp | CAAGTCGAAGCAGCATCCTCAGAAATCTGGCCAAATGCATTTGCCTaGCTGAAAGCTCTCCCCGCCCTGAGTAGTCTGTTCTGTAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVEAASSEIWPNAFA*LKALPALSSLFCKG Trigger: CCCTTTACAGAACAGACTACTCAGGGCGGGGAGAGCTTTCAGCCAGGCAAATGCATTTGGCCAGATTTCTGAGGATGCTGCTTCGACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
||
| CDS CCA 90 bp | GGATCTGCAGCGAACATGGCTGCTCCATCTACTTGGGCTACTACCTaGTTGGTGATTACCACTGCGACACCAAACTCATCAGCAAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GSAANMAAPSTWATT*LVITTATPNSSASR Trigger: TCGACTTGCTGATGAGTTTGGTGTCGCAGTGGTAATCACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGCCATGTTCGCTGCAGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
||
| CDS TCA 90 bp | CCTCCACCACGGTCAATGGGGAGCTGGCATGTAACAGCCAACGTATaGCAGATCTGTGTCTTCCCAGTTCGGAATTCTCCAAACATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PPPRSMGSWHVTANV*QICVFPVRNSPNIS Trigger: AGAGATGTTTGGAGAATTCCGAACTGGGAAGACACAGATCTGTCATACGTTGGCTGTTACATGCCAGCTCCCCATTGACCGTGGTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 ENSMUST00000152327.8 |
||
| CDS-3UTR CAA 90 bp | AGCCATGCGGGGCAGTCACAACATGAGCCTGTGAAGAAGCCCAGTACACAGTCCCCATTGGAACCAATTTaGCTGCCTCAGTCAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: SHAGQSQHEPVKKPSTQSPLEPI*LPQSEF Trigger: AAATTCTGACTGAGGCAGCAAAATTGGTTCCAATGG...GGACTGTGTACTGGGCTTCTTCACAGGCTCATGTTGTGACTGCCCCGCATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CAA 90 bp | TATATGCCTGAAGGAGGCCAGACTCAGTCTGAAGCTGAGGTAAGGCACTCCGAGCTGAAGTATCTGCACTaGCTTCAAGCTGCATTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YMPEGGQTQSEAEVRHSELKYLH*LQAAFA Trigger: TGCAAATGCAGCTTGAAGCAAGTGCAGATACTTCAG...CTCGGAGTGCCTTACCTCAGCTTCAGACTGAGTCTGGCCTCCTTCAGGCATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAATGCTGGGCTTTCTTTCAGGTTCACACTTTACAACTGCAGCTGACCATAGGCTGCTCCATCTACTaGGGCTACTACCTGGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PECWAFFQVHTLQLQLTIGCSIY*GYYLVG Trigger: ACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGCC...TATGGTCAGCTGCAGTTGTAAAGTGTGAACCTGAAAGAAAGCCCAGCATTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR CAA 90 bp | GTATATAATACGCTCCCTGTATTCCTGGGTGAGGGCTGGACCATGGACTGGAGAGCCTCAGTCAGAATTTaGTCAGCTTTGGCTTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: VYNTLPVFLGEGWTMDWRASVRI*SALASL Trigger: TAGTGAAGCCAAAGCTGACAAAATTCTGACTGAGGC...TCTCCAGTCCATGGTCCAGCCCTCACCCAGGAATACAGGGAGCGTATTATATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS TCA 90 bp | TCTTTGGAGCCAGTAGTTATCTGTATGATCTCTGACCGGCGCTGGTaGAACTCAGTTGCCGTGGTGAAACCCATTGGAACCAATTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLEPVVICMISDRRW*NSVAVVKPIGTNFA Trigger: AGCAAAATTGGTTCCAATGGGTTTCACCACGGCAACTGAGTTTCACCAGCGCCGGTCAGAGATCATACAGATAACTACTGGCTCCAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028795.10 ENSMUST00000140939.8 ENSMUST00000152327.8 |
||
| CDS-3UTR CAA 90 bp | ATTTATTGTCCTTTAATGTCACACCCTACCTACGAGGACAAAAGGAGCCAGCACTGGGCTACTACCTGGTaGGTGATTACCACTGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: IYCPLMSHPTYEDKRSQHWATTW*VITTAT Trigger: TGTCGCAGTGGTAATCACCAACCAGGTAGTAGCCCA...GTGCTGGCTCCTTTTGTCCTCGTAGGTAGGGTGTGACATTAAAGGACAATAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028795.10 |
||
| CDS-3UTR CAA 90 bp | AGTGGTTATAGTTACTTGCTGCTCTTACAGAGCACCCATGTGGTGACTCAGAACAGCTTGTCCAGCTCTTaGGAGCCAGTAGTTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SGYSYLLLLQSTHVVTQNSLSSS*EPVVIC Trigger: ACAGATAACTACTGGCTCCAAAGAGCTGGACAAGCT...GTTCTGAGTCACCACATGGGTGCTCTGTAAGAGCAGCAAGTAACTATAACCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAATGCTGGGCTTTCTTTCAGGTTCACACTTTACAACTGCAGCTGACCATACCATTGGAACCAATTTaGCTGCCTCAGTCAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: PECWAFFQVHTLQLQLTIPLEPI*LPQSEF Trigger: AAATTCTGACTGAGGCAGCAAAATTGGTTCCAATGG...TATGGTCAGCTGCAGTTGTAAAGTGTGAACCTGAAAGAAAGCCCAGCATTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CAA 90 bp | GTACCGAAAGCTGTTATAGAAACCCTGTTTTGCAATATTCAGTTTGCACTAGAAGTCTGGTGGTCTGTGTaGAACCCTCGCGCATATGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPKAVIETLFCNIQFALEVWWSV*NPRAYA Trigger: AGCATATGCGCGAGGGTTCAACACAGACCACCAGAC...TTCTAGTGCAAACTGAATATTGCAAAACAGGGTTTCTATAACAGCTTTCGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS CCA 90 bp | ACCAATTTTGCTGCCTCAGTAAAAGCAACAATCACAGCAACTAACTaGAGAGTGGTTAAGAGTTCTTGTTCTTGCAGAAGACGCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNFAASVKATITATN*RVVKSSCSCRRRRF Trigger: GAACCTGCGTCTTCTGCAAGAACAAGAACTCTTAACCACTCTCCAGTTAGTTGCTGTGATTGTTGCTTTTACTGAGGCAGCAAAATTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140939.8 |
||
| CDS-3UTR CAA 90 bp | CCACTGCACACAACTACTTTATTAGCAGCAGAACAAATTTCCTTAAGTGAAGTCCTGAAGTATCTGCACTaGCTTCAAGCTGCATTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLHTTTLLAAEQISLSEVLKYLH*LQAAFA Trigger: TGCAAATGCAGCTTGAAGCAAGTGCAGATACTTCAG...GACTTCACTTAAGGAAATTTGTTCTGCTGCTAATAAAGTAGTTGTGTGCAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CAA 90 bp | ATAAATATTTGTTATCAGAGGCTGGAGAGATGGCTCAGTGGTTATAGTTACTTGAGCTTGTCCAGCTCTTaGGAGCCAGTAGTTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: INICYQRLERWLSGYSYLSLSSS*EPVVIC Trigger: ACAGATAACTACTGGCTCCAAAGAGCTGGACAAGCT...CAAGTAACTATAACCACTGAGCCATCTCTCCAGCCTCTGATAACAAATATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CAA 90 bp | CCACTGCACACAACTACTTTATTAGCAGCAGAACAAATTTCCTTAAGTGAAGTCAATTTCTTCACATCATaGGCATTTATGCCACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLHTTTLLAAEQISLSEVNFFTS*AFMPHC Trigger: GCAGTGTGGCATAAATGCCAATGATGTGAAGAAATT...GACTTCACTTAAGGAAATTTGTTCTGCTGCTAATAAAGTAGTTGTGTGCAGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGCACTAGAATATCTCCAGCAAATAACACATCCACTGCACACAACTACTTTAATTTCTTCACATCATaGGCATTTATGCCACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VCTRISPANNTSTAHNYFNFFTS*AFMPHC Trigger: GCAGTGTGGCATAAATGCCAATGATGTGAAGAAATT...AAAGTAGTTGTGTGCAGTGGATGTGTTATTTGCTGGAGATATTCTAGTGCAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS GCA 72 bp | GCAAGTCGAAGCAGCATCCTCAGAAATCTGGCCAAATaGATTTGCCTGGCTGAAAGCTCTCCCCGCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ASRSSILRNLAK*ICLAESSPRPE Trigger: CTCAGGGCGGGGAGAGCTTTCAGCCAGGCAAATGCATTTGGCCAGATTTCTGAGGATGCTGCTTCGACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
||
| CDS TCA 72 bp | CCACTGCGACACCAAACTGGATTCTACCATCATGGCTaGCGCTTGGTAAAGGAGCTGGGTCTGGTGGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PLRHQTGFYHHG*RLVKELGLVVC Trigger: ACAGACCACCAGACCCAGCTCCTTTACCAAGCGTCAGCCATGATGGTAGAATCCAGTTTGGTGTCGCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152327.8 |
||
| CDS CCA 72 bp | GCAGCATCCTCAGAAATCTGGCCAAATGCATTTGCCTaGCTGAAAGCTCTCCCCGCCCTGAGTAGTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AASSEIWPNAFA*LKALPALSSLF Trigger: GAACAGACTACTCAGGGCGGGGAGAGCTTTCAGCCAGGCAAATGCATTTGGCCAGATTTCTGAGGATGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
||
| CDS TCA 72 bp | TCTCTGACCGGCGCTGGTGAAACTCAGTTGCCGTGGTaGAACCCATTGGAACCAATTTTGCTGCCTCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLTGAGETQLPW*NPLEPILLPQS Trigger: TGACTGAGGCAGCAAAATTGGTTCCAATGGGTTTCACCACGGCAACTGAGTTTCACCAGCGCCGGTCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
||
| CDS CCA 72 bp | TTGGGATCTGCAGCGAACATGGCTGCTCCATCTACTTaGGCTACTACCTGGTTGGTGATTACCACTGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: LGSAANMAAPST*ATTWLVITTAT Trigger: TGTCGCAGTGGTAATCACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGCCATGTTCGCTGCAGATCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
||
| CDS CAA 72 bp | TTTGGGATCTGCAGCGAACATGGCTGCTCCATCTACTaGGGCTACTACCTGGTTGGTGATTACCACTGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: FGICSEHGCSIY*GYYLVGDYHCD Trigger: GTCGCAGTGGTAATCACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGCCATGTTCGCTGCAGATCCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
||
| CDS CAA 90 bp | TCTGCAGCGAACATGGCTGCTCCATCTACTTGGGCTACTACCTGGTaGGTGATTACCACTGCGACACCAAACTCATCAGCAAGTCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SAANMAAPSTWATTW*VITTATPNSSASRS Trigger: GCTTCGACTTGCTGATGAGTTTGGTGTCGCAGTGGTAATCACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGCCATGTTCGCTGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
||
| CDS TCA 72 bp | CCAGTAGTTATCTGTATGATCTCTGACCGGCGCTGGTaGAACTCAGTTGCCGTGGTGAAACCCATTGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: PVVICMISDRRW*NSVAVVKPIGT Trigger: GGTTCCAATGGGTTTCACCACGGCAACTGAGTTTCACCAGCGCCGGTCAGAGATCATACAGATAACTACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028795.10 ENSMUST00000140939.8 ENSMUST00000152327.8 |
||
| CDS TCA 72 bp | CAGCTCTTTGGAGCCAGTAGTTATCTGTATGATCTCTaGCCGGCGCTGGTGAAACTCAGTTGCCGTGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QLFGASSYLYDL*PALVKLSCRGE Trigger: TTCACCACGGCAACTGAGTTTCACCAGCGCCGGTCAGAGATCATACAGATAACTACTGGCTCCAAAGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028795.10 ENSMUST00000140939.8 ENSMUST00000152327.8 |
||
| CDS TCA 72 bp | CGGTCAATGGGGAGCTGGCATGTAACAGCCAACGTATaGCAGATCTGTGTCTTCCCAGTTCGGAATTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RSMGSWHVTANV*QICVFPVRNSP Trigger: TGGAGAATTCCGAACTGGGAAGACACAGATCTGTCATACGTTGGCTGTTACATGCCAGCTCCCCATTGACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 ENSMUST00000152327.8 |
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| CDS TCA 72 bp | TGGCTGCTCCATCTACTTGGGCTACTACCTGGTTGGTaGTTACCACTGCGACACCAAACTCATCAGCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: WLLHLLGLLPGW*LPLRHQTHQQV Trigger: GACTTGCTGATGAGTTTGGTGTCGCAGTGGTAATCACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
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| CDS CCA 72 bp | ACTCATCAGCAAGTCGAAGCAGCATCCTCAGAAATCTaGCCAAATGCATTTGCCTGGCTGAAAGCTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: THQQVEAASSEI*PNAFAWLKALP Trigger: GGGGAGAGCTTTCAGCCAGGCAAATGCATTTGGCCAGATTTCTGAGGATGCTGCTTCGACTTGCTGATGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
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| CDS CCA 72 bp | GCGAACATGGCTGCTCCATCTACTTGGGCTACTACCTaGTTGGTGATTACCACTGCGACACCAAACTCATCA | + |
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Preference number: 6 (lower is better) Translates to: ANMAAPSTWATT*LVITTATPNSS Trigger: TGATGAGTTTGGTGTCGCAGTGGTAATCACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGCCATGTTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
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| CDS TCA 72 bp | ACGCTTGGTAAAGGAGCTGGGTCTGGTGGTCTGTGTTaGACCCTCGCGCATATGCTACATTATCTAGGACAT | + |
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Preference number: 6 (lower is better) Translates to: TLGKGAGSGGLC*TLAHMLHYLGH Trigger: ATGTCCTAGATAATGTAGCATATGCGCGAGGGTTCAACACAGACCACCAGACCCAGCTCCTTTACCAAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 ENSMUST00000152327.8 |
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| CDS TCA 72 bp | AATAAGCAGTGCATACCTGGATTCTACCATCATGGCTaGCGCTTGGTAAAGGAGCTGGGTCTGGTGGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: NKQCIPGFYHHG*RLVKELGLVVC Trigger: ACAGACCACCAGACCCAGCTCCTTTACCAAGCGTCAGCCATGATGGTAGAATCCAGGTATGCACTGCTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
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| CDS CAA 72 bp | AACATGGCTGCTCCATCTACTTGGGCTACTACCTGGTaGGTGATTACCACTGCGACACCAAACTCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: NMAAPSTWATTW*VITTATPNSSA Trigger: TGCTGATGAGTTTGGTGTCGCAGTGGTAATCACCAACCAGGTAGTAGCCCAAGTAGATGGAGCAGCCATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000151406.2 |
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| CDS CCA 72 bp | GCGCTGGTGAAACTCAGTTGCCGTGGTGAAACCCATTaGAACCAATTTTGCTGCCTCAGTCAGAATTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: ALVKLSCRGETH*NQFCCLSQNFV Trigger: GACAAAATTCTGACTGAGGCAGCAAAATTGGTTCCAATGGGTTTCACCACGGCAACTGAGTTTCACCAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| CDS GCA 72 bp | CTCAGTTGCCGTGGTGAAACCCATTGGAACCAATTTTaGTGCCTCAGTCAGAATTTTGTCAGCTTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSCRGETHWNQF*CLSQNFVSFGF Trigger: GAAGCCAAAGCTGACAAAATTCTGACTGAGGCAGCAAAATTGGTTCCAATGGGTTTCACCACGGCAACTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028795.10 ENSMUST00000152327.8 |
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| CDS CCA 72 bp | GCGCTGGTGAAACTCAGTTGCCGTGGTGAAACCCATTaGAACCAATTTTGCTGCCTCAGTAAAAGCAACAAT | + |
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Preference number: 6 (lower is better) Translates to: ALVKLSCRGETH*NQFCCLSKSNN Trigger: ATTGTTGCTTTTACTGAGGCAGCAAAATTGGTTCCAATGGGTTTCACCACGGCAACTGAGTTTCACCAGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140939.8 |
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| CDS CCA 72 bp | GCTGCCTCAGTAAAAGCAACAATCACAGCAACTAACTaGAGAGTGGTTAAGAGTTCTTGTTCTTGCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: AASVKATITATN*RVVKSSCSCRR Trigger: TCTTCTGCAAGAACAAGAACTCTTAACCACTCTCCAGTTAGTTGCTGTGATTGTTGCTTTTACTGAGGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140939.8 |
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