Pregenerated sensors for RAD50 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020380Ensembl transcript IDs: ENSMUST00000020649.14, ENSMUST00000124352.2, ENSMUST00000128483.8
Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCGTGGAGATGTGTACTGGACTTCACCAGGCTCAGCCTCTGGAGTaGAAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: AVEMCTGLHQAQPLE*KCGLPLQVCAWSRL Trigger: GAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR GCA 90 bp | GACTTCACCAGGCTCAGCCTCTGGAGTGAAAATGTGGTTTGCCTTTaGAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: DFTRLSLWSENVVCL*RSVRGAGSSCVSLL Trigger: AAGGAGACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTCACTCCAGAGGCTGAGCCTGGTGAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR CCA 90 bp | GATGTGTACTGGACTTCACCAGGCTCAGCCTCTGGAGTGAAAATGTaGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCG | + |
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Preference number: 1 (lower is better) Translates to: DVYWTSPGSASGVKM*FAFAGLCVEQAPAA Trigger: CGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR CCA 90 bp | GTATCCAGCCTGTGCTGCTTTTCCTGCTTTTCCTGGTTAACCTGCTaGACAGTCCGGTCCAAGTCTACTCCCTGCAGCTTAGCTGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: VSSLCCFSCFSWLTC*TVRSKSTPCSLAAC Trigger: GCAGGCAGCTAAGCTGCAGGGAGTAGACTTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGGCTGGATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR GCA 90 bp | ACTGTATCCAGCCTGTGCTGCTTTTCCTGCTTTTCCTGGTTAACCTaGTGGACAGTCCGGTCCAAGTCTACTCCCTGCAGCTTAGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: TVSSLCCFSCFSWLT*WTVRSKSTPCSLAA Trigger: GGCAGCTAAGCTGCAGGGAGTAGACTTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGGCTGGATACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR CCA 90 bp | GCAATGCCGTGGAGATGTGTACTGGACTTCACCAGGCTCAGCCTCTaGAGTGAAAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: AMPWRCVLDFTRLSL*SENVVCLCRSVRGA Trigger: TGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACGGCATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR CCA 90 bp | TTAGATGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTaGAGATGTGTACTGGACTTCACCAGGCTCAGCCTCTGGAGTGAA | + |
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Preference number: 1 (lower is better) Translates to: LDVSCLHRRLQLAMP*RCVLDFTRLSLWSE Trigger: TTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACATCTAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR TCA 90 bp | CATCTTCACTCAAGGCAGCCTCCCGATCTTAGGGACTCTCAAACCTaGCACACATGGTTCCCGTCACACAATCCATATCCTTCCCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: HLHSRQPPDLRDSQT*HTWFPSHNPYPSQD Trigger: GTCTTGGGAAGGATATGGATTGTGTGACGGGAACCATGTGTGTCAGGTTTGAGAGTCCCTAAGATCGGGAGGCTGCCTTGAGTGAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR GCA 90 bp | GACAGTCCGGTCCAAGTCTACTCCCTGCAGCTTAGCTGCCTGCTGTaGAATTTTCCTTTCAACATCTTTCAGCTCCATCTGGAACCTCTC | + |
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Preference number: 1 (lower is better) Translates to: DSPVQVYSLQLSCLL*NFPFNIFQLHLEPL Trigger: GAGAGGTTCCAGATGGAGCTGAAAGATGTTGAAAGGAAAATTGCACAGCAGGCAGCTAAGCTGCAGGGAGTAGACTTGGACCGGACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR GCA 90 bp | AAAGACTGGACTTCAGTGGATAATTCCACACTCTGCTCCTCCATTTaGTGGCGCCGTTGCAAATTGGTGGCTATCTGCAGCTTCTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: KDWTSVDNSTLCSSI*WRRCKLVAICSFSD Trigger: GTCAGAGAAGCTGCAGATAGCCACCAATTTGCAACGGCGCCAGCAAATGGAGGAGCAGAGTGTGGAATTATCCACTGAAGTCCAGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR GCA 90 bp | CTCTGCTCCTCCATTTGCTGGCGCCGTTGCAAATTGGTGGCTATCTaGAGCTTCTCTGACTTCAGCTCATTTGTTTTACTTTTCAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: LCSSICWRRCKLVAI*SFSDFSSFVLLFRC Trigger: ACACCTGAAAAGTAAAACAAATGAGCTGAAGTCAGAGAAGCTGCAGATAGCCACCAATTTGCAACGGCGCCAGCAAATGGAGGAGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR CCA 90 bp | GACTGTGGTTTCAGGGGAGACCTAGACTCAGACAGGTCGTGTGCATaGATTCATGTGACAGCAGGGCTACGTATTAAATATACCTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: DCGFRGDLDSDRSCA*IHVTAGLRIKYTFK Trigger: CTTGAAGGTATATTTAATACGTAGCCCTGCTGTCACATGAATCCATGCACACGACCTGTCTGAGTCTAGGTCTCCCCTGAAACCACAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR CCA 90 bp | TGCAGCTTCTCTGACTTCAGCTCATTTGTTTTACTTTTCAGGTGTTaGATTTGTTCCTGCTGGTCCTGTATAAGCTTACGGTTCAATTCA | + |
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Preference number: 1 (lower is better) Translates to: CSFSDFSSFVLLFRC*ICSCWSCISLRFNS Trigger: TGAATTGAACCGTAAGCTTATACAGGACCAGCAGGAACAAATCCAACACCTGAAAAGTAAAACAAATGAGCTGAAGTCAGAGAAGCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR GCA 90 bp | TTAGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCCTaGTCTTCTATGTCATTCTTTAGGCGCTGTATGTCTCTATTGACA | + |
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Preference number: 1 (lower is better) Translates to: LALSSSGIIVPKSVS*SSMSFFRRCMSLLT Trigger: TGTCAATAGAGACATACAGCGCCTAAAGAATGACATAGAAGAGCAGGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR CAA 90 bp | GACATTCAGTTGGCAGGAAATGAAAGGCTGAGTGGTGCTGGGAGGTaGCTAGGCCTGTGGGAACTGTGTTCATCTTCACTCAAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: DIQLAGNERLSGAGR*LGLWELCSSSLKAA Trigger: GGCTGCCTTGAGTGAAGATGAACACAGTTCCCACAGGCCTAGCAACCTCCCAGCACCACTCAGCCTTTCATTTCCTGCCAACTGAATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR-3UTR GCA 90 bp | CAATGCCGTGGAGATGTGTACTGGACTTCACCAGGCTCAGCCTCTGGAGTGAAATGGCTTCTGTCACTCTaGCAGCCCCGTTCAATGACT | + |
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Preference number: 2 (lower is better) Translates to: QCRGDVYWTSPGSASGVKWLLSL*QPRSMT Trigger: AGTCATTGAACGGGGCTGGCAGAGTGACAGAAGCCA...TTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACGGCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR-3UTR GCA 90 bp | AGCCTCAGCTTGGACTGCAAGTCGCTGATGACTTCCTGTAACTCAGCCTCTGTCGAACTGGGAGTAAACTaGTGTGGCTCCTGCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SLSLDCKSLMTSCNSASVELGVN*CGSCQH Trigger: ATGCTGGCAGGAGCCACAGCAGTTTACTCCCAGTTC...GACAGAGGCTGAGTTACAGGAAGTCATCAGCGACTTGCAGTCCAAGCTGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTAGAGGTGACACCCAACAAATCTGCAGATGGCACAGAACAGGCCACCCACGTGGAGATGTGTACTaGACTTCACCAGGCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: CSRGDTQQICRWHRTGHPRGDVY*TSPGSA Trigger: GGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACG...TGGGTGGCCTGTTCTGTGCCATCTGCAGATTTGTTGGGTGTCACCTCTAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR-3UTR TCA 90 bp | TGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATGGCTGCATTCAGTTGGCAGGAAATaGAAGGCTGAGTGGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: WGNSSLTASQGTYLVWLHSVGRK*KAEWCW Trigger: CCAGCACCACTCAGCCTTTCATTTCCTGCCAACTGA...ATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR-3UTR CCA 90 bp | AGTTCCGATTCTGTTGACTTGAGTTTATCTGGAGCAAGCCTCAGCTTGGACTGCACTGGGCAGCAGGACTaGTTTTCATCTGTCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SSDSVDLSLSGASLSLDCTGQQD*FSSVSC Trigger: GCAGCTGACAGATGAAAACCAGTCCTGCTGCCCAGT...GCAGTCCAAGCTGAGGCTTGCTCCAGATAAACTCAAGTCAACAGAATCGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCAACTGCTGTGGCTCCTaGCAGCATGGCTCGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: CWSCISLRFNSILLVTVSNCCGS*QHGSLL Trigger: AAGCAGCGAGCCATGCTGGCAGGAGCCACAGCAGTT...GGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCAGCA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTCCGATTCTGTTGACTTGAGTTTATCTGGAGCAAGCCTCAGCTTGGACTGCCATGGCTCGCTGCTTTaGGGACTTTTCAATTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSDSVDLSLSGASLSLDCHGSLL*GLFNFF Trigger: GAAGAAATTGAAAAGTCCTCAAAGCAGCGAGCCATG...GCAGTCCAAGCTGAGGCTTGCTCCAGATAAACTCAAGTCAACAGAATCGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR GCA 90 bp | TTACTTTTCAGGTGTTGGATTTGTTCCTGCTGGTCCTGTATAAGCTTACGGTTCGTATCCAGCCTGTGCTaGTTTTCCTGCTTTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLFRCWICSCWSCISLRFVSSLC*FSCFSW Trigger: CCAGGAAAAGCAGGAAAAGCAGCACAGGCTGGATAC...GAACCGTAAGCTTATACAGGACCAGCAGGAACAAATCCAACACCTGAAAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCAGCTTGGACTGCAAGTCGCTGATGACTTCCTGTAACTCAGCCTCTGTCTCACTTTCCAAATCTTaGCTACCACAAACATCAAAT | + |
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Preference number: 2 (lower is better) Translates to: SLSLDCKSLMTSCNSASVSLSKS*LPQTSN Trigger: ATTTGATGTTTGTGGTAGCCAAGATTTGGAAAGTGA...GACAGAGGCTGAGTTACAGGAAGTCATCAGCGACTTGCAGTCCAAGCTGAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCAGCTACTCTCTGACAGACTaGGCAGCAGGACTGGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: WSCISLRFNSILLVTVSSYSLTD*AAGLVF Trigger: GAAAACCAGTCCTGCTGCCCAGTCTGTCAGAGAGTA...GCTGGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCATGTGACAGCAGGGCTACGTATTAAATATACCTTCAAGCTTCAGAGAAAAAGGGACTCTCAAACCTaGCACACATGGTTCCCGTCA | + |
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Preference number: 2 (lower is better) Translates to: IHVTAGLRIKYTFKLQRKRDSQT*HTWFPS Trigger: TGACGGGAACCATGTGTGTCAGGTTTGAGAGTCCCT...TTTTCTCTGAAGCTTGAAGGTATATTTAATACGTAGCCCTGCTGTCACATGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCCCGATTCTGTTGACTTaGGTTTATCTGGAGCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: CWSCISLRFNSILLVTVSPILLT*VYLEQA Trigger: GGCTTGCTCCAGATAAACTCAAGTCAACAGAATCGG...GGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCCTGTGCTGCTTTTCCTaGTTTTCCTGGTTAACCTGC | + |
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Preference number: 2 (lower is better) Translates to: CWSCISLRFNSILLVTVSLCCFS*FSWLTC Trigger: GCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAG...GGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCAGCTGCAGCTTAGCTGCCTaGTGTGCAATTTTCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: WSCISLRFNSILLVTVSSCSLAA*CAIFLS Trigger: TGAAAGGAAAATTGCACAGCAGGCAGCTAAGCTGCA...GCTGGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR GCA 90 bp | AACATCTGTCAGGCACACTTTAGCACTTTCTTCTTCAGGCATTATTGTACCCAACCTTCAAATCAATTATaGTTTGCCTCACGGGCACAA | + |
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Preference number: 2 (lower is better) Translates to: NICQAHFSTFFFRHYCTQPSNQL*FASRAQ Trigger: TTGTGCCCGTGAGGCAAAGCATAATTGATTTGAAGG...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCTAAAGTGTGCCTGACAGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCATGATTGTAACATCTGTCAGGCACACTTTAGCACTTTCTTCTTCAGGCATGCTTATCTTCATAACTaGACAACTGTTCTTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: LHDCNICQAHFSTFFFRHAYLHN*TTVLPF Trigger: AAAAGGAAGAACAGTTGTCCAGTTATGAAGATAAGC...ATGCCTGAAGAAGAAAGTGCTAAAGTGTGCCTGACAGATGTTACAATCATGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR GCA 72 bp | TGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTaGGTGAGTCTCCTTTCCAGCCACAGGAGAACCTGC | + |
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Preference number: 3 (lower is better) Translates to: CLCRSVRGAGSS*VSLLSSHRRTC Trigger: GCAGGTTCTCCTGTGGCTGGAAAGGAGACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR GCA 72 bp | AGGCTCAGCCTCTGGAGTGAAAATGTGGTTTGCCTTTaGAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: RLSLWSENVVCL*RSVRGAGSSCV Trigger: CACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTCACTCCAGAGGCTGAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR-3UTR CAA 90 bp | CTGCATGATGGGCAGATGAGGTCAGGACTGGGGAAACTCTTCTCTAACAGCCAGAGTGGTGCTGGGAGGTaGCTAGGCCTGTGGGAACTG | + |
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Preference number: 3 (lower is better) Translates to: LHDGQMRSGLGKLFSNSQSGAGR*LGLWEL Trigger: CAGTTCCCACAGGCCTAGCAACCTCCCAGCACCACT...CTGGCTGTTAGAGAAGAGTTTCCCCAGTCCTGACCTCATCTGCCCATCATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR TCA 72 bp | TTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTaGGTCTCCTTTCCAGCCACAGGAGAACCTGCTATT | + |
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Preference number: 3 (lower is better) Translates to: FAGLCVEQAPAA*VSFPATGEPAI Trigger: AATAGCAGGTTCTCCTGTGGCTGGAAAGGAGACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR CCA 72 bp | GAAAGGCTGAGTGGTGCTGGGAGGTTGCTAGGCCTGTaGGAACTGTGTTCATCTTCACTCAAGGCAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: ERLSGAGRLLGL*ELCSSSLKAAS Trigger: GGAGGCTGCCTTGAGTGAAGATGAACACAGTTCCCACAGGCCTAGCAACCTCCCAGCACCACTCAGCCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR CCA 72 bp | TCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTaGAGATGTGTACTGGACTTCACCAGGCTCAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SCLHRRLQLAMP*RCVLDFTRLSL Trigger: GAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR TCA 72 bp | CATGACAGACACAGAGGAGAGCGCCAGGCTTCTGCATaGTGGGCAGATGAGGTCAGGACTGGGGAAACTCTT | + |
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Preference number: 3 (lower is better) Translates to: HDRHRGERQASA*WADEVRTGETL Trigger: AAGAGTTTCCCCAGTCCTGACCTCATCTGCCCATCATGCAGAAGCCTGGCGCTCTCCTCTGTGTCTGTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR GCA 72 bp | AGCCTGTGCTGCTTTTCCTGCTTTTCCTGGTTAACCTaGTGGACAGTCCGGTCCAAGTCTACTCCCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: SLCCFSCFSWLT*WTVRSKSTPCS Trigger: GCTGCAGGGAGTAGACTTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR CCA 72 bp | TGGACTTCACCAGGCTCAGCCTCTGGAGTGAAAATGTaGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: WTSPGSASGVKM*FAFAGLCVEQA Trigger: AGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR GCA 72 bp | ATGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATaGCGTGGAGATGTGTACTGGACTTCACCAGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: MCPVFTGGFSWQ*RGDVYWTSPGS Trigger: TGAGCCTGGTGAAGTCCAGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR TCA 72 bp | ATGTGTACTGGACTTCACCAGGCTCAGCCTCTGGAGTaGAAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGG | + |
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Preference number: 3 (lower is better) Translates to: MCTGLHQAQPLE*KCGLPLQVCAW Trigger: CCACGCACAGACCTGCAAAGGCAAACCACATTTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR CCA 72 bp | CTGTGCTGCTTTTCCTGCTTTTCCTGGTTAACCTGCTaGACAGTCCGGTCCAAGTCTACTCCCTGCAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: LCCFSCFSWLTC*TVRSKSTPCSL Trigger: TAAGCTGCAGGGAGTAGACTTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR-3UTR CAA 90 bp | CAGATGAGGTCAGGACTGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTACTGGATGACATTCAGTaGGCAGGAAATGAAAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: QMRSGLGKLFSNSQPGYLLDDIQ*AGNERL Trigger: CAGCCTTTCATTTCCTGCCAACTGAATGTCATCCAG...TAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCAGTCCTGACCTCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR TCA 72 bp | ACAAATCTGCAGATGGCACAGAACAGGCCACCCAGCTaGGTGAGAGAACTGTTAGTGACATCTGGAAGCGTG | + |
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Preference number: 3 (lower is better) Translates to: TNLQMAQNRPPS*VRELLVTSGSV Trigger: CACGCTTCCAGATGTCACTAACAGTTCTCTCACTCAGCTGGGTGGCCTGTTCTGTGCCATCTGCAGATTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR GCA 72 bp | ATTCCACTAAATGATCACCGATGGCTTCTGTCACTCTaGCAGCCCCGTTCAATGACTGTGGTTTCAGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: IPLNDHRWLLSL*QPRSMTVVSGE Trigger: CTCCCCTGAAACCACAGTCATTGAACGGGGCTGGCAGAGTGACAGAAGCCATCGGTGATCATTTAGTGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| 3UTR GCA 72 bp | TTACTGGTAACTGTATCCAGCCTGTGCTGCTTTTCCTaGTTTTCCTGGTTAACCTGCTGGACAGTCCGGTCC | + |
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Preference number: 3 (lower is better) Translates to: LLVTVSSLCCFS*FSWLTCWTVRS Trigger: GGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGGCTGGATACAGTTACCAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| 3UTR GCA 72 bp | ACTTCAGTGGATAATTCCACACTCTGCTCCTCCATTTaGTGGCGCCGTTGCAAATTGGTGGCTATCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TSVDNSTLCSSI*WRRCKLVAICS Trigger: GCTGCAGATAGCCACCAATTTGCAACGGCGCCAGCAAATGGAGGAGCAGAGTGTGGAATTATCCACTGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| 3UTR CCA 72 bp | TCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATaGCTGCATGGGGAGCGAACTGCGTATTCCACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSLTASQGTYLV*LHGERTAYSTK Trigger: TTTAGTGGAATACGCAGTTCGCTCCCCATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| 3UTR CCA 72 bp | TGGAGATGTGTACTGGACTTCACCAGGCTCAGCCTCTaGAGTGAAAATGTGGTTTGCCTTTGCAGGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: WRCVLDFTRLSL*SENVVCLCRSV Trigger: CACAGACCTGCAAAGGCAAACCACATTTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| 3UTR CCA 72 bp | ACTGTATCCAGCCTGTGCTGCTTTTCCTGCTTTTCCTaGTTAACCTGCTGGACAGTCCGGTCCAAGTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: TVSSLCCFSCFS*LTCWTVRSKST Trigger: AGTAGACTTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGGCTGGATACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| 3UTR CCA 72 bp | TTCAGGGGAGACCTAGACTCAGACAGGTCGTGTGCATaGATTCATGTGACAGCAGGGCTACGTATTAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: FRGDLDSDRSCA*IHVTAGLRIKY Trigger: ATATTTAATACGTAGCCCTGCTGTCACATGAATCCATGCACACGACCTGTCTGAGTCTAGGTCTCCCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| 3UTR GCA 72 bp | TCCATTTGCTGGCGCCGTTGCAAATTGGTGGCTATCTaGAGCTTCTCTGACTTCAGCTCATTTGTTTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: SICWRRCKLVAI*SFSDFSSFVLL Trigger: AAGTAAAACAAATGAGCTGAAGTCAGAGAAGCTGCAGATAGCCACCAATTTGCAACGGCGCCAGCAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| 3UTR GCA 72 bp | AATTCAATCTTACTGGTAACTGTATCCAGCCTGTGCTaGTTTTCCTGCTTTTCCTGGTTAACCTGCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: NSILLVTVSSLC*FSCFSWLTCWT Trigger: TGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGGCTGGATACAGTTACCAGTAAGATTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACTTTTCAGGTGTTGGATTTGTTCCTGCTGGTCCTGTATAAGCTTACGGTTCTCCGATTCTGTTGACTaGAGTTTATCTGGAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLFRCWICSCWSCISLRFSDSVD*SLSGAS Trigger: GCTTGCTCCAGATAAACTCAAGTCAACAGAATCGGA...GAACCGTAAGCTTATACAGGACCAGCAGGAACAAATCCAACACCTGAAAAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGCATTATTGTACCCAAGAGTGTTTCCTGCTCTTCTATGTCATTCTTTAGGGCATGGCTCGCTGCTTaGAGGACTTTTCAATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SGIIVPKSVSCSSMSFFRAWLAA*RTFQFL Trigger: AAGAAATTGAAAAGTCCTCAAAGCAGCGAGCCATGC...CCTAAAGAATGACATAGAAGAGCAGGAAACACTCTTGGGTACAATAATGCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGCATTATTGTACCCAAGAGTGTTTCCTGCTCTTCTATGTCATTCTTTAGGCGCTGTATGTCTCTATaGACACTCTGTAGTCGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SGIIVPKSVSCSSMSFFRRCMSL*TLCSRF Trigger: AAACCGACTACAGAGTGTCAATAGAGACATACAGCG...CCTAAAGAATGACATAGAAGAGCAGGAAACACTCTTGGGTACAATAATGCCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| 3UTR GCA 72 bp | TCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCCTaGTCTTCTATGTCATTCTTTAGGCGCTGTATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSGIIVPKSVS*SSMSFFRRCMS Trigger: AGACATACAGCGCCTAAAGAATGACATAGAAGAGCAGGAAACACTCTTGGGTACAATAATGCCTGAAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| 3UTR-3UTR CAA 90 bp | AACATCTGTCAGGCACACTTTAGCACTTTCTTCTTCAGGCATTATTGTACCCAAATCACTTTCCAAATCTaGGCTACCACAAACATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NICQAHFSTFFFRHYCTQITFQI*ATTNIK Trigger: TTTGATGTTTGTGGTAGCCAAGATTTGGAAAGTGAT...TTGGGTACAATAATGCCTGAAGAAGAAAGTGCTAAAGTGTGCCTGACAGATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTCTCCTTTTCTCCAGTTCTCGCTaGCAGTCTACCAGGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCLCRSVRGAGSSCVSLLFSSSR*QSTRRL Trigger: AAGGCGCCTGGTAGACTGCCAGCGAGAACTGGAGAA...AAGGAGACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGGGGAGTAAACTGCTGTaGCTCCTGCCAGCATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KCGLPLQVCAWSRLQLREGSKLL*LLPAWL Trigger: GAGCCATGCTGGCAGGAGCCACAGCAGTTTACTCCC...CTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTTCCAGCCACAGGAGAACCTGCTATTGAGAGTAACTGGGGCCAGGCCAGCTCGGATGTGCTCTTaGTGGCGATCTGCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPFQPQENLLLRVTGARPARMCS*WRSACS Trigger: GCTACAGGCAGATCGCCATCAAGAGCACATCCGAGC...TGGCCTGGCCCCAGTTACTCTCAATAGCAGGTTCTCCTGTGGCTGGAAAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | GTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTCTCCTTCTCTGCTCCTCCATTTaGTGGCGCCGTTGCAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: VCLCRSVRGAGSSCVSLLLCSSI*WRRCKL Trigger: CAATTTGCAACGGCGCCAGCAAATGGAGGAGCAGAG...AAGGAGACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | GTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTCTCCTTACTGGGCAGCAGGACTaGTTTTCATCTGTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VCLCRSVRGAGSSCVSLLTGQQD*FSSVSC Trigger: GCAGCTGACAGATGAAAACCAGTCCTGCTGCCCAGT...AAGGAGACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | AATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTCATCCAAGGCAAGGATaGCACAGTTCAGACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVVCLCRSVRGAGSSCVSHPRQG*HSSDRR Trigger: CCTTCTGTCTGAACTGTGGCATCCTTGCCTTGGATG...ACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | AATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTTACTCTCTGACAGACTaGGCAGCAGGACTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVVCLCRSVRGAGSSCVSYSLTD*AAGLVF Trigger: GAAAACCAGTCCTGCTGCCCAGTCTGTCAGAGAGTA...ACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | CAATGCCGTGGAGATGTGTACTGGACTTCACCAGGCTCAGCCTCTGGAGTGAAATCCAAGTCTACTCCCTaGAGCTTAGCTGCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QCRGDVYWTSPGSASGVKSKSTP*SLAACC Trigger: ACAGCAGGCAGCTAAGCTGCAGGGAGTAGACTTGGA...TTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACGGCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTGTGTGTCGATGTCTTaGCTCATGGTTCCCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCGLPLQVCAWSRLQLRECVSMS*LMVPMS Trigger: AGACATGGGAACCATGAGGCAAGACATCGACACACA...CTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | GTGAAAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGCGAAGACGCTAACTaGGCTTCCTTACTCGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: VKMWFAFAGLCVEQAPAACEDAN*ASLLVI Trigger: GATTACGAGTAAGGAAGCCCAGTTAGCGTCTTCGCA...CGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTTCCAGCCACAGGAGAACCTGCTATTGAGAGTAACTGGGGCCAGGCCAAGGTCGCTCAAGAGCTaGCTGGCAGTTTTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPFQPQENLLLRVTGARPRSLKS*LAVLAS Trigger: AGAAGCTAAAACTGCCAGCCAGCTCTTGAGCGACCT...TGGCCTGGCCCCAGTTACTCTCAATAGCAGGTTCTCCTGTGGCTGGAAAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | CTGCATGATGGGCAGATGAGGTCAGGACTGGGGAAACTCTTCTCTAACAGCCAGGCTTTCGTGAGCTCCTaGTCCAGTTCCAGAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHDGQMRSGLGKLFSNSQAFVSS*SSSRIL Trigger: CAGGATTCTGGAACTGGACCAGGAGCTCACGAAAGC...CTGGCTGTTAGAGAAGAGTTTCCCCAGTCCTGACCTCATCTGCCCATCATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | GTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTCTCCTTTGGATTTGTTCCTGCTaGTCCTGTATAAGCTTACGG | + |
|
Preference number: 4 (lower is better) Translates to: VCLCRSVRGAGSSCVSLLWICSC*SCISLR Trigger: CCGTAAGCTTATACAGGACCAGCAGGAACAAATCCA...AAGGAGACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | AATGAAAGGCTGAGTGGTGCTGGGAGGTTGCTAGGCCTGTGGGAACTGTGTTCAGGCGCCGTTGCAAATTaGTGGCTATCTGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NERLSGAGRLLGLWELCSGAVAN*WLSAAS Trigger: AGAAGCTGCAGATAGCCACCAATTTGCAACGGCGCC...TGAACACAGTTCCCACAGGCCTAGCAACCTCCCAGCACCACTCAGCCTTTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| 3UTR CAA 72 bp | TTGGCAGGAAATGAAAGGCTGAGTGGTGCTGGGAGGTaGCTAGGCCTGTGGGAACTGTGTTCATCTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LAGNERLSGAGR*LGLWELCSSSL Trigger: GAGTGAAGATGAACACAGTTCCCACAGGCCTAGCAACCTCCCAGCACCACTCAGCCTTTCATTTCCTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | TGGGAGGTTGCTAGGCCTGTGGGAACTGTGTTCATCTTCACTCAAGGCAGCCTCGTGCGGGTTGTTGTATaGTGGTTTAACTGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: WEVARPVGTVFIFTQGSLVRVVV*WFNCSI Trigger: GATGGAGCAGTTAAACCATCATACAACAACCCGCAC...GAGGCTGCCTTGAGTGAAGATGAACACAGTTCCCACAGGCCTAGCAACCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | GTGAAAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGCATGGCTCGCTGCTTTaGGGACTTTTCAATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKMWFAFAGLCVEQAPAAHGSLL*GLFNFF Trigger: GAAGAAATTGAAAAGTCCTCAAAGCAGCGAGCCATG...CGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | TGGGAGGTTGCTAGGCCTGTGGGAACTGTGTTCATCTTCACTCAAGGCAGCCTCCCGATTCTGTTGACTTaGGTTTATCTGGAGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WEVARPVGTVFIFTQGSLPILLT*VYLEQA Trigger: GGCTTGCTCCAGATAAACTCAAGTCAACAGAATCGG...GAGGCTGCCTTGAGTGAAGATGAACACAGTTCCCACAGGCCTAGCAACCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | CAATGCCGTGGAGATGTGTACTGGACTTCACCAGGCTCAGCCTCTGGAGTGAAAGACCTGACAATTTCCTaGGAAGACGCTAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QCRGDVYWTSPGSASGVKDLTIS*EDANWA Trigger: AGCCCAGTTAGCGTCTTCGCAGGAAATTGTCAGGTC...TTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACGGCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | CCTGTGCTGCTTTTCCTGCTTTTCCTGGTTAACCTGCTGGACAGTCCGGTCCAAGACCTGACAATTTCCTaGGAAGACGCTAACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVLLFLLFLVNLLDSPVQDLTIS*EDANWA Trigger: AGCCCAGTTAGCGTCTTCGCAGGAAATTGTCAGGTC...TTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTTCATCAAGCTGCCTCTaGTTCAGAGCTTCTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVVCLCRSVRGAGSSCVSSSSCL*FRASLS Trigger: AGACAAAGAAGCTCTGAAGCAGAGGCAGCTTGATGA...ACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | AATGAAAGGCTGAGTGGTGCTGGGAGGTTGCTAGGCCTGTGGGAACTGTGTTCAGATAATTCCACACTCTaGTCCTCCATTTGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NERLSGAGRLLGLWELCSDNSTL*SSICWR Trigger: GCGCCAGCAAATGGAGGAGCAGAGTGTGGAATTATC...TGAACACAGTTCCCACAGGCCTAGCAACCTCCCAGCACCACTCAGCCTTTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | GAAAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTTGGAAGTTGCGCTaGTGTGAGCGACTTTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: ENVVCLCRSVRGAGSSCVSWKLR*CERLFM Trigger: CATAAAAAGTCGCTCACAGCAGCGCAACTTCCAACT...CACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | ATTCAGTTGGCAGGAAATGAAAGGCTGAGTGGTGCTGGGAGGTTGCTAGGCCTGCCAGAAGTTGGAAGTTaGGCTGCTGTGAGCGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: IQLAGNERLSGAGRLLGLPEVGS*AAVSDF Trigger: AAAGTCGCTCACAGCAGCGCAACTTCCAACTTCTGG...CAGGCCTAGCAACCTCCCAGCACCACTCAGCCTTTCATTTCCTGCCAACTGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | CTGGTTTTCATCTGTCAGCTGCGTAATGAACTGGGAGTAAACTGCTGTGGCTCCTTCTCCAGTTCTCGCTaGCAGTCTACCAGGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFICQLRNELGVNCCGSFSSSR*QSTRRL Trigger: AAGGCGCCTGGTAGACTGCCAGCGAGAACTGGAGAA...GGAGCCACAGCAGTTTACTCCCAGTTCATTACGCAGCTGACAGATGAAAACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCGTGTGACTTAGATGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGAACTGCTCCATCTCCTaGTCCAGCTTTCGCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EACDLDVSCLHRRLQLAMNCSIS*SSFRKL Trigger: GAGCTTGCGAAAGCTGGACCAGGAGATGGAGCAGTT...CATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACATCTAAGTCACACGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTGGAGATGTGTACTGCCGTTGCAAATTGGTaGCTATCTGCAGCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVLSSQEASAGNAVEMCTAVANW*LSAASL Trigger: CAGAGAAGCTGCAGATAGCCACCAATTTGCAACGGC...AGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | TGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTGGAGATGTGTACTGAAGTTGCGCTGCTGTaGGCGACTTTTTATGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVLSSQEASAGNAVEMCTEVALL*ATFYDL Trigger: GAGATCATAAAAAGTCGCTCACAGCAGCGCAACTTC...AGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | AATGAAAGGCTGAGTGGTGCTGGGAGGTTGCTAGGCCTGTGGGAACTGTGTTCACTGGTTGAGGAGCCGTaGTTCTTTATTCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NERLSGAGRLLGLWELCSLVEEP*FFIQLL Trigger: GAGAAGCTGAATAAAGAAGCACGGCTCCTCAACCAG...TGAACACAGTTCCCACAGGCCTAGCAACCTCCCAGCACCACTCAGCCTTTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGCCTTCAAATCAATTATaGTTTGCCTCACGGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: KCGLPLQVCAWSRLQLREPSNQL*FASRAQ Trigger: TTGTGCCCGTGAGGCAAAGCATAATTGATTTGAAGG...CTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | GAAAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGCTTAGCTGCCTGCTGTaGAATTTTCCTTTCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: ENVVCLCRSVRGAGSSCVLSCLL*NFPFNI Trigger: GATGTTGAAAGGAAAATTGCACAGCAGGCAGCTAAG...CACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | AATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTGAATTAATGAGTCTCTaGCTCGGATGTGCTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NVVCLCRSVRGAGSSCVSELMSL*LGCALD Trigger: ATCAAGAGCACATCCGAGCCAGAGACTCATTAATTC...ACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | AATGAAAGGCTGAGTGGTGCTGGGAGGTTGCTAGGCCTGTGGGAACTGTGTTCAGCTGTATGTCTCTATTaGCACTCTGTAGTCGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NERLSGAGRLLGLWELCSAVCLY*HSVVGF Trigger: GAAACCGACTACAGAGTGTCAATAGAGACATACAGC...TGAACACAGTTCCCACAGGCCTAGCAACCTCCCAGCACCACTCAGCCTTTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | CTCCCGATCTTAGGGACTCTCAAACCTGACACACATGGTTCCCGTCACACAATCGCTCTGTGGTCCTCATaGCGATCATCATTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPILGTLKPDTHGSRHTIALWSS*RSSFLC Trigger: ACAGAGAAATGATGATCGTCATGAGGACCACAGAGC...GATTGTGTGACGGGAACCATGTGTGTCAGGTTTGAGAGTCCCTAAGATCGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGTTGCTAGGCCTGTGGGAACTGTGTTCATCTTCACTCAAGGCAGCCTCTTAGGGTTTCTATGCTaGTATTTTTCTCGGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WEVARPVGTVFIFTQGSLLGFLC*YFSRPC Trigger: GCAAGGCCGAGAAAAATAGCAGCATAGAAACCCTAA...GAGGCTGCCTTGAGTGAAGATGAACACAGTTCCCACAGGCCTAGCAACCTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | CAGATGAGGTCAGGACTGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATGCAGCTTAGCTGCCTaGTGTGCAATTTTCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QMRSGLGKLFSNSQPGYLCSLAA*CAIFLS Trigger: TGAAAGGAAAATTGCACAGCAGGCAGCTAAGCTGCA...TAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCAGTCCTGACCTCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | AATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTTGTTGGATTTGTTCCTaGTGGTCCTGTATAAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: NVVCLCRSVRGAGSSCVSCWICS*WSCISL Trigger: TAAGCTTATACAGGACCAGCAGGAACAAATCCAACA...ACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | TCAAACCTGACACACATGGTTCCCGTCACACAATCCATATCCTTCCCAAGACAACCTTCTGTCCAGCACTaGATCGTCCACGCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNLTHMVPVTQSISFPRQPSVQH*IVHACP Trigger: TGGACATGCGTGGACGATGCAGTGCTGGACAGAAGG...TTGTCTTGGGAAGGATATGGATTGTGTGACGGGAACCATGTGTGTCAGGTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTGGAGATGTGTACTCTGTCTTTCACTGAATaGTCCACGCTCAAAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: CVLSSQEASAGNAVEMCTLSFTE*STLKTI Trigger: GATGGTTTTGAGCGTGGACCATTCAGTGAAAGACAG...AGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | CCTGTGCTGCTTTTCCTGCTTTTCCTGGTTAACCTGCTGGACAGTCCGGTCCAACTGTCTTTCACTGAATaGTCCACGCTCAAAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: PVLLFLLFLVNLLDSPVQLSFTE*STLKTI Trigger: GATGGTTTTGAGCGTGGACCATTCAGTGAAAGACAG...TTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCCGATTCTGTTGACTTGAGTTTATCTGGAGCAAGCCTCAGCTTGGACTGCAACTGCTCCATCTCCTaGTCCAGCTTTCGCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSDSVDLSLSGASLSLDCNCSIS*SSFRKL Trigger: GAGCTTGCGAAAGCTGGACCAGGAGATGGAGCAGTT...GCAGTCCAAGCTGAGGCTTGCTCCAGATAAACTCAAGTCAACAGAATCGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATGGCTGCATGCTCTTTGTTCAGTTTaGCAAGTCTGTCCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSLTASQGTYLVWLHALCSV*QVCPWS Trigger: AGACCAGGGACAGACTTGCCAAACTGAACAAAGAGC...ATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTGGAGATGTGTACTTTTTCCTGCTTTTCCTaGTTAACCTGCTGGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CVLSSQEASAGNAVEMCTFSCFS*LTCWTV Trigger: GACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAA...AGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | GTGAAAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGCGATGTCTTGCCTCATaGTTCCCATGTCTTTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: VKMWFAFAGLCVEQAPAARCLAS*FPCLYL Trigger: TAAATAAAGACATGGGAACCATGAGGCAAGACATCG...CGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATGGCTGCATGTGATTACCAGAAGTTaGAAGTTGCGCTGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSLTASQGTYLVWLHVITRS*KLRCCE Trigger: CTCACAGCAGCGCAACTTCCAACTTCTGGTAATCAC...ATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTTCCAGCCACAGGAGAACCTGCTATTGAGAGTAACTGGGGCCAGGCCAGCAACCTTGGGATCATaGACAAATGTATTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPFQPQENLLLRVTGARPATLGS*TNVFPL Trigger: CAAAGGAAATACATTTGTTCATGATCCCAAGGTTGC...TGGCCTGGCCCCAGTTACTCTCAATAGCAGGTTCTCCTGTGGCTGGAAAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | GGGAGTAAACTGCTGTGGCTCCTGCCAGCATGGCTCGCTGCTTTGAGGACTTTTGCAACCTTGGGATCATaGACAAATGTATTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSKLLWLLPAWLAALRTFATLGS*TNVFPL Trigger: CAAAGGAAATACATTTGTTCATGATCCCAAGGTTGC...AAAAGTCCTCAAAGCAGCGAGCCATGCTGGCAGGAGCCACAGCAGTTTACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR GCA 90 bp | TCAAACCTGACACACATGGTTCCCGTCACACAATCCATATCCTTCCCAAGACAAGAACTGGGAGTAAACTaGTGTGGCTCCTGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNLTHMVPVTQSISFPRQELGVN*CGSCQH Trigger: ATGCTGGCAGGAGCCACAGCAGTTTACTCCCAGTTC...TTGTCTTGGGAAGGATATGGATTGTGTGACGGGAACCATGTGTGTCAGGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGTTGCTAGGCCTGTGGGAACTGTGTTCATCTTCACTCAAGGCAGCCTCCCCAAGAGTGTTTCCTaGTCTTCTATGTCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WEVARPVGTVFIFTQGSLPKSVS*SSMSFF Trigger: AAAGAATGACATAGAAGAGCAGGAAACACTCTTGGG...GAGGCTGCCTTGAGTGAAGATGAACACAGTTCCCACAGGCCTAGCAACCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | GAAGCGTGTGACTTAGATGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGAAATTGGTGGCTATCTaGAGCTTCTCTGACTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EACDLDVSCLHRRLQLAMKLVAI*SFSDFS Trigger: GCTGAAGTCAGAGAAGCTGCAGATAGCCACCAATTT...CATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACATCTAAGTCACACGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | TCAGGCATTATTGTACCCAAGAGTGTTTCCTGCTCTTCTATGTCATTCTTTAGGGCTCGGATGTGCTCTTaGTGGCGATCTGCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGIIVPKSVSCSSMSFFRARMCS*WRSACS Trigger: GCTACAGGCAGATCGCCATCAAGAGCACATCCGAGC...CCTAAAGAATGACATAGAAGAGCAGGAAACACTCTTGGGTACAATAATGCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR TCA 90 bp | CTGCATGATGGGCAGATGAGGTCAGGACTGGGGAAACTCTTCTCTAACAGCCAGTCTTTGGATTTAGAATaGAGCCAGTCTTCAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHDGQMRSGLGKLFSNSQSLDLE*SQSSSC Trigger: ACAGCTTGAAGACTGGCTTCATTCTAAATCCAAAGA...CTGGCTGTTAGAGAAGAGTTTCCCCAGTCCTGACCTCATCTGCCCATCATGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | TGTTCTAGAGGTGACACCCAACAAATCTGCAGATGGCACAGAACAGGCCACCCAGTGAGCGACTTTTTATaGTCTCAACCAAAGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSRGDTQQICRWHRTGHPVSDFL*SQPKHV Trigger: CACATGCTTTGGTTGAGATCATAAAAAGTCGCTCAC...TGGGTGGCCTGTTCTGTGCCATCTGCAGATTTGTTGGGTGTCACCTCTAGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | CTCCCGATCTTAGGGACTCTCAAACCTGACACACATGGTTCCCGTCACACAATCTTCTCTGTCGATTTCTaGACATTTGGAGCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LPILGTLKPDTHGSRHTIFSVDF*TFGAET Trigger: AGTCTCAGCTCCAAATGTGCAGAAATCGACAGAGAA...GATTGTGTGACGGGAACCATGTGTGTCAGGTTTGAGAGTCCCTAAGATCGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | AGTTCCGATTCTGTTGACTTGAGTTTATCTGGAGCAAGCCTCAGCTTGGACTGCCTGGTTGAGGAGCCGTaGTTCTTTATTCAGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSDSVDLSLSGASLSLDCLVEEP*FFIQLL Trigger: GAGAAGCTGAATAAAGAAGCACGGCTCCTCAACCAG...GCAGTCCAAGCTGAGGCTTGCTCCAGATAAACTCAAGTCAACAGAATCGGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR GCA 90 bp | CAATGCCGTGGAGATGTGTACTGGACTTCACCAGGCTCAGCCTCTGGAGTGAAACTTTTAGGGTTTCTATaGTGCTATTTTTCTCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QCRGDVYWTSPGSASGVKLLGFL*CYFSRP Trigger: AGGCCGAGAAAAATAGCAGCATAGAAACCCTAAAAG...TTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACGGCATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | TGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATGGCTGCATCTGCAACTTTTCCAATaGTGTCTCCAAAGGGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSLTASQGTYLVWLHLQLFQ*CLQRAY Trigger: ATAAGCCCTTTGGAGACAGCATTGGAAAAGTTGCAG...ATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | AATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTAATTCTTCTTTTTCCTaGTGCAACTTTTCCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVVCLCRSVRGAGSSCVSNSSFS*CNFSNA Trigger: AGCATTGGAAAAGTTGCAGCAGGAAAAAGAAGAATT...ACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | AATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTGCTTATCTTCATAACTaGACAACTGTTCTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NVVCLCRSVRGAGSSCVSAYLHN*TTVLPF Trigger: AAAAGGAAGAACAGTTGTCCAGTTATGAAGATAAGC...ACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | GAAGCGTGTGACTTAGATGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGAAGACTGGACTTCAGTaGATAATTCCACACTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EACDLDVSCLHRRLQLAMKTGLQ*IIPHSA Trigger: AGCAGAGTGTGGAATTATCCACTGAAGTCCAGTCTT...CATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACATCTAAGTCACACGCTTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | TGTTCTAGAGGTGACACCCAACAAATCTGCAGATGGCACAGAACAGGCCACCCAACAAAATCTTCATCGTaGGTGATTACCAGAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSRGDTQQICRWHRTGHPTKSSS*VITRSW Trigger: CCAACTTCTGGTAATCACTCACGATGAAGATTTTGT...TGGGTGGCCTGTTCTGTGCCATCTGCAGATTTGTTGGGTGTCACCTCTAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | TTACTTTTCAGGTGTTGGATTTGTTCCTGCTGGTCCTGTATAAGCTTACGGTTCTTCGCACGCCCAGAATaGTCATCTTTTCGATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFRCWICSCWSCISLRFFARPE*SSFRSG Trigger: CCCGGATCGAAAAGATGAGCATTCTGGGCGTGCGAA...GAACCGTAAGCTTATACAGGACCAGCAGGAACAAATCCAACACCTGAAAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCGATCTTAGGGACTCTCAAACCTGACACACATGGTTCCCGTCACACAATCTGTTTAGCACAGACTTaGAAACCCCAAGACAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPILGTLKPDTHGSRHTICLAQT*KPQDNL Trigger: TAAGTTGTCTTGGGGTTTCCAAGTCTGTGCTAAACA...GATTGTGTGACGGGAACCATGTGTGTCAGGTTTGAGAGTCCCTAAGATCGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTGGAGATGTGTACTTCTCTGTTTAAAGACTaGACTTCAGTGGATAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVLSSQEASAGNAVEMCTSLFKD*TSVDNS Trigger: GGAATTATCCACTGAAGTCCAGTCTTTAAACAGAGA...AGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR TCA 90 bp | GAAGCGTGTGACTTAGATGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGAGTCTGTCCCTGGTCTaGTTAATTTCTTTGGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: EACDLDVSCLHRRLQLAMSLSLV*LISLDL Trigger: TAAATCCAAAGAAATTAATCAGACCAGGGACAGACT...CATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACATCTAAGTCACACGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | CAATGCCGTGGAGATGTGTACTGGACTTCACCAGGCTCAGCCTCTGGAGTGAAACTGACTTTTTCACCATaGTTCATTCTAGTAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: QCRGDVYWTSPGSASGVKLTFSP*FILVMT Trigger: AGTCATTACTAGAATGAAGCATGGTGAAAAAGTCAG...TTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACGGCATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | GTTGACTTGAGTTTATCTGGAGCAAGCCTCAGCTTGGACTGCAAGTCGCTGATGCTTTTAGGGTTTCTATaGTGCTATTTTTCTCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VDLSLSGASLSLDCKSLMLLGFL*CYFSRP Trigger: AGGCCGAGAAAAATAGCAGCATAGAAACCCTAAAAG...CATCAGCGACTTGCAGTCCAAGCTGAGGCTTGCTCCAGATAAACTCAAGTCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR GCA 90 bp | ATTCATGTGACAGCAGGGCTACGTATTAAATATACCTTCAAGCTTCAGAGAAAAAACTGCTGTGGCTCCTaGCAGCATGGCTCGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IHVTAGLRIKYTFKLQRKNCCGS*QHGSLL Trigger: AAGCAGCGAGCCATGCTGGCAGGAGCCACAGCAGTT...TTTTCTCTGAAGCTTGAAGGTATATTTAATACGTAGCCCTGCTGTCACATGAAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | GTCAGCACTGTTTATCTGGATGACATTCAGTTGGCAGGAAATGAAAGGCTGAGTCTGTGCTGCTTTTCCTaGTTTTCCTGGTTAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSTVYLDDIQLAGNERLSLCCFS*FSWLTC Trigger: GCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAG...ACTCAGCCTTTCATTTCCTGCCAACTGAATGTCATCCAGATAAACAGTGCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | GTAACATCTGTCAGGCACACTTTAGCACTTTCTTCTTCAGGCATTATTGTACCCAGGTCGCTCAAGAGCTaGCTGGCAGTTTTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTSVRHTLALSSSGIIVPRSLKS*LAVLAS Trigger: AGAAGCTAAAACTGCCAGCCAGCTCTTGAGCGACCT...GGGTACAATAATGCCTGAAGAAGAAAGTGCTAAAGTGTGCCTGACAGATGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCGCTTTCGTGAGCTCCTaGTCCAGTTCCAGAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CWSCISLRFNSILLVTVSAFVSS*SSSRIL Trigger: CAGGATTCTGGAACTGGACCAGGAGCTCACGAAAGC...GGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR TCA 90 bp | GTTTATCTGGATGACATTCAGTTGGCAGGAAATGAAAGGCTGAGTGGTGCTGGGCCCAATGCCAAACTGTaGTTTCTCTTTATAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VYLDDIQLAGNERLSGAGPNAKL*FLFIVS Trigger: AGACACTATAAAGAGAAATCACAGTTTGGCATTGGG...CCCAGCACCACTCAGCCTTTCATTTCCTGCCAACTGAATGTCATCCAGATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | TGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATGGCTGCATGTTAGTTCATCACTGTaGCTAGACTTTATTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSLTASQGTYLVWLHVSSSL*LDFIFL Trigger: CAGAAAAATAAAGTCTAGGCACAGTGATGAACTAAC...ATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | GTTTATCTGGATGACATTCAGTTGGCAGGAAATGAAAGGCTGAGTGGTGCTGGGTCTTCTTTTTCCTGCTaGAACTTTTCCAATGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VYLDDIQLAGNERLSGAGSSFSC*NFSNAV Trigger: GACAGCATTGGAAAAGTTGCAGCAGGAAAAAGAAGA...CCCAGCACCACTCAGCCTTTCATTTCCTGCCAACTGAATGTCATCCAGATAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | TGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATGGCTGCATTTCATTTGTAAAACTTaGATTTGTCCCATCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WGNSSLTASQGTYLVWLHFICKT*ICPISF Trigger: GAAGGAGATGGGACAAATGCAAGTTTTACAAATGAA...ATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CCA 90 bp | TGTTCTAGAGGTGACACCCAACAAATCTGCAGATGGCACAGAACAGGCCACCCATTTCTTGAGCAACCTTaGGATCATGAACAAATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CSRGDTQQICRWHRTGHPFLEQP*DHEQMY Trigger: ATACATTTGTTCATGATCCCAAGGTTGCTCAAGAAA...TGGGTGGCCTGTTCTGTGCCATCTGCAGATTTGTTGGGTGTCACCTCTAGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | ATTCATGTGACAGCAGGGCTACGTATTAAATATACCTTCAAGCTTCAGAGAAAATTCGCACGCCCAGAATaGTCATCTTTTCGATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHVTAGLRIKYTFKLQRKFARPE*SSFRSG Trigger: CCCGGATCGAAAAGATGAGCATTCTGGGCGTGCGAA...TTTTCTCTGAAGCTTGAAGGTATATTTAATACGTAGCCCTGCTGTCACATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR GCA 90 bp | GTTGACTTGAGTTTATCTGGAGCAAGCCTCAGCTTGGACTGCAAGTCGCTGATGCTGACTTTTTCACCATaGTTCATTCTAGTAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: VDLSLSGASLSLDCKSLMLTFSP*FILVMT Trigger: AGTCATTACTAGAATGAAGCATGGTGAAAAAGTCAG...CATCAGCGACTTGCAGTCCAAGCTGAGGCTTGCTCCAGATAAACTCAAGTCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATGATTGTAACATCTGTCAGGCACACTTTAGCACTTTCTTCTTCAGGCATTCATCAAGCTGCCTCTaGTTCAGAGCTTCTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHDCNICQAHFSTFFFRHSSSCL*FRASLS Trigger: AGACAAAGAAGCTCTGAAGCAGAGGCAGCTTGATGA...ATGCCTGAAGAAGAAAGTGCTAAAGTGTGCCTGACAGATGTTACAATCATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCGCATCTCCATCTGTGTaGGGGTTGTTGTATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CWSCISLRFNSILLVTVSASPSV*GLLYDG Trigger: ACCATCATACAACAACCCGCACACAGATGGAGATGC...GGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGCACTGTTTATCTGGATGACATTCAGTTGGCAGGAAATGAAAGGCTGAGTTATCTGCAGCTTCTCTaGCTTCAGCTCATTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSTVYLDDIQLAGNERLSYLQLL*LQLICF Trigger: AAAACAAATGAGCTGAAGTCAGAGAAGCTGCAGATA...ACTCAGCCTTTCATTTCCTGCCAACTGAATGTCATCCAGATAAACAGTGCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR GCA 90 bp | ATTCATGTGACAGCAGGGCTACGTATTAAATATACCTTCAAGCTTCAGAGAAAAGTATCCAGCCTGTGCTaGTTTTCCTGCTTTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IHVTAGLRIKYTFKLQRKVSSLC*FSCFSW Trigger: CCAGGAAAAGCAGGAAAAGCAGCACAGGCTGGATAC...TTTTCTCTGAAGCTTGAAGGTATATTTAATACGTAGCCCTGCTGTCACATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR GCA 90 bp | ACTTTAGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCCTGCTCTTTAGGGTTTCTATGCTaGTATTTTTCTCGGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLALSSSGIIVPKSVSCSLGFLC*YFSRPC Trigger: GCAAGGCCGAGAAAAATAGCAGCATAGAAACCCTAA...AGAGCAGGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCTAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR GCA 90 bp | ATTCATGTGACAGCAGGGCTACGTATTAAATATACCTTCAAGCTTCAGAGAAAAGCATCTCCATCTGTGTaGGGGTTGTTGTATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: IHVTAGLRIKYTFKLQRKASPSV*GLLYDG Trigger: ACCATCATACAACAACCCGCACACAGATGGAGATGC...TTTTCTCTGAAGCTTGAAGGTATATTTAATACGTAGCCCTGCTGTCACATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CCA 90 bp | TGCTGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCGAATTAATGAGTCTCTaGCTCGGATGTGCTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CWSCISLRFNSILLVTVSELMSL*LGCALD Trigger: ATCAAGAGCACATCCGAGCCAGAGACTCATTAATTC...GGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCAGCA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CCA 90 bp | TGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCAGCTGTTTAGCACAGACTTaGAAACCCCAAGACAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: WSCISLRFNSILLVTVSSCLAQT*KPQDNL Trigger: TAAGTTGTCTTGGGGTTTCCAAGTCTGTGCTAAACA...GCTGGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CCA 90 bp | GTCAGCACTGTTTATCTGGATGACATTCAGTTGGCAGGAAATGAAAGGCTGAGTTCACTTTCCAAATCTTaGCTACCACAAACATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSTVYLDDIQLAGNERLSSLSKS*LPQTSN Trigger: ATTTGATGTTTGTGGTAGCCAAGATTTGGAAAGTGA...ACTCAGCCTTTCATTTCCTGCCAACTGAATGTCATCCAGATAAACAGTGCTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CCA 90 bp | CTCCATGATTGTAACATCTGTCAGGCACACTTTAGCACTTTCTTCTTCAGGCATTTTCTTGAGCAACCTTaGGATCATGAACAAATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHDCNICQAHFSTFFFRHFLEQP*DHEQMY Trigger: ATACATTTGTTCATGATCCCAAGGTTGCTCAAGAAA...ATGCCTGAAGAAGAAAGTGCTAAAGTGTGCCTGACAGATGTTACAATCATGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CCA 90 bp | ATTCATGTGACAGCAGGGCTACGTATTAAATATACCTTCAAGCTTCAGAGAAAATTACTTTTCAGGTGTTaGATTTGTTCCTGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IHVTAGLRIKYTFKLQRKLLFRC*ICSCWS Trigger: GGACCAGCAGGAACAAATCCAACACCTGAAAAGTAA...TTTTCTCTGAAGCTTGAAGGTATATTTAATACGTAGCCCTGCTGTCACATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS GCA 90 bp | TCCTGGTCCAGTTCCAGAATCCTGTCGGAGGAGCCCTCCAGCTGCTaGAGCTCACTCCTCACGTGCCGCAGCTCGCTCTGCTTCTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWSSSRILSEEPSSC*SSLLTCRSSLCFFV Trigger: CACGAAGAAGCAGAGCGAGCTGCGGCACGTGAGGAGTGAGCTGCAGCAGCTGGAGGGCTCCTCCGACAGGATTCTGGAACTGGACCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS GCA 90 bp | AGCTCCTGGTCCAGTTCCAGAATCCTGTCGGAGGAGCCCTCCAGCTaGTGCAGCTCACTCCTCACGTGCCGCAGCTCGCTCTGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSWSSSRILSEEPSS*CSSLLTCRSSLCFF Trigger: GAAGAAGCAGAGCGAGCTGCGGCACGTGAGGAGTGAGCTGCAGCAGCTGGAGGGCTCCTCCGACAGGATTCTGGAACTGGACCAGGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS GCA 90 bp | CTCCCCAGTCCGCTCTTCCTGTCCCTCAGCTCATCAAGCTGCCTCTaGTTCAGAGCTTCTTTGTCTGTCAGGTCGCTCAAGAGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPSPLFLSLSSSSCL*FRASLSVRSLKSWL Trigger: CAGCCAGCTCTTGAGCGACCTGACAGACAAAGAAGCTCTGAAGCAGAGGCAGCTTGATGAGCTGAGGGACAGGAAGAGCGGACTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | TCTCCTTTCCAGCCACAGGAGAACCTGCTATTGAGAGTAACTGGGGCCAGGCCAGGAGCAAGCCTCAGCTaGGACTGCAAGTCGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPFQPQENLLLRVTGARPGASLS*DCKSLM Trigger: CATCAGCGACTTGCAGTCCAAGCTGAGGCTTGCTCC...TGGCCTGGCCCCAGTTACTCTCAATAGCAGGTTCTCCTGTGGCTGGAAAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | CAGATGAGGTCAGGACTGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTACTCGGTCGAGATTTGTaGTCGGCTCATCCAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QMRSGLGKLFSNSQPGYLLGRDL*SAHPRQ Trigger: TTGCCTTGGATGAGCCGACAACAAATCTCGACCGAG...TAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCAGTCCTGACCTCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | TGGGAGGTTGCTAGGCCTGTGGGAACTGTGTTCATCTTCACTCAAGGCAGCCTCTTTCTCGGTCGAGATTaGTTGTCGGCTCATCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WEVARPVGTVFIFTQGSLFLGRD*LSAHPR Trigger: CCTTGGATGAGCCGACAACAAATCTCGACCGAGAAA...GAGGCTGCCTTGAGTGAAGATGAACACAGTTCCCACAGGCCTAGCAACCTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CCA 90 bp | TGGTTGAGGAGCCGTGCTTCTTTATTCAGCTTCTCCAGTTCTCGCTaGCAGTCTACCAGGCGCCTTTCTTTCTCCCTTACTGTTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLRSRASLFSFSSSR*QSTRRLSFSLTVLW Trigger: CCAGAGAACAGTAAGGGAGAAAGAAAGGCGCCTGGTAGACTGCCAGCGAGAACTGGAGAAGCTGAATAAAGAAGCACGGCTCCTCAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | GTGAAAATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGCGCTGTATGTCTCTATaGACACTCTGTAGTCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VKMWFAFAGLCVEQAPAARCMSL*TLCSRF Trigger: AAACCGACTACAGAGTGTCAATAGAGACATACAGCG...CGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATTTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | AATGTGGTTTGCCTTTGCAGGTCTGTGCGTGGAGCAGGCTCCAGCTGCGTGAGTTTTCAGGTGTTGGATTaGTTCCTGCTGGTCCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: NVVCLCRSVRGAGSSCVSFQVLD*FLLVLY Trigger: ATACAGGACCAGCAGGAACAAATCCAACACCTGAAA...ACTCACGCAGCTGGAGCCTGCTCCACGCACAGACCTGCAAAGGCAAACCACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | TGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATGGCTGCATACTCTGCTCCTCCATTaGCTGGCGCCGTTGCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: WGNSSLTASQGTYLVWLHTLLLH*LAPLQI Trigger: AATTTGCAACGGCGCCAGCAAATGGAGGAGCAGAGT...ATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | TGTTCTAGAGGTGACACCCAACAAATCTGCAGATGGCACAGAACAGGCCACCCAACCAGAAGTTGGAAGTaGCGCTGCTGTGAGCGACTT | + |
|
Preference number: 5 (lower is better) Translates to: CSRGDTQQICRWHRTGHPTRSWK*RCCERL Trigger: AAGTCGCTCACAGCAGCGCAACTTCCAACTTCTGGT...TGGGTGGCCTGTTCTGTGCCATCTGCAGATTTGTTGGGTGTCACCTCTAGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | TGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTGGAGATGTGTACTTCTGCTTTTTCCTGGTaGAGGAGCCGTGCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CVLSSQEASAGNAVEMCTSAFSW*RSRASL Trigger: TAAAGAAGCACGGCTCCTCAACCAGGAAAAAGCAGA...AGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | GGGAGTAAACTGCTGTGGCTCCTGCCAGCATGGCTCGCTGCTTTGAGGACTTTTTCTGTGTGCGGGTTGTaGTATGATGGTTTAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSKLLWLLPAWLAALRTFSVCGL*YDGLTA Trigger: AGCAGTTAAACCATCATACAACAACCCGCACACAGA...AAAAGTCCTCAAAGCAGCGAGCCATGCTGGCAGGAGCCACAGCAGTTTACTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | CAATGCCGTGGAGATGTGTACTGGACTTCACCAGGCTCAGCCTCTGGAGTGAAACCATCTGTGTGCGGGTaGTTGTATGATGGTTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: QCRGDVYWTSPGSASGVKPSVCG*LYDGLT Trigger: AGTTAAACCATCATACAACAACCCGCACACAGATGG...TTTCACTCCAGAGGCTGAGCCTGGTGAAGTCCAGTACACATCTCCACGGCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | CCTGTGCTGCTTTTCCTGCTTTTCCTGGTTAACCTGCTGGACAGTCCGGTCCAACCATCTGTGTGCGGGTaGTTGTATGATGGTTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: PVLLFLLFLVNLLDSPVQPSVCG*LYDGLT Trigger: AGTTAAACCATCATACAACAACCCGCACACAGATGG...TTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | TGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATGGCTGCATGCTGAAGCTAGCTCTTaGTTCAGTTTGGCAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGNSSLTASQGTYLVWLHAEASS*FSLASL Trigger: CAGACTTGCCAAACTGAACAAAGAGCTAGCTTCAGC...ATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | AGCCTCAGCTTGGACTGCAAGTCGCTGATGACTTCCTGTAACTCAGCCTCTGTCGCTCTTTGTTTGTCTTaGGTGAGCATCTCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLDCKSLMTSCNSASVALCLS*VSISIC Trigger: ACAGATGGAGATGCTCACCAAAGACAAACAAAGAGC...GACAGAGGCTGAGTTACAGGAAGTCATCAGCGACTTGCAGTCCAAGCTGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | CCTGTGCTGCTTTTCCTGCTTTTCCTGGTTAACCTGCTGGACAGTCCGGTCCAAAAGCTAGCTCTTTGTTaGTCTTTGGTGAGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVLLFLLFLVNLLDSPVQKLALC*SLVSIS Trigger: GGAGATGCTCACCAAAGACAAACAAAGAGCTAGCTT...TTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS TCA 90 bp | TGTAGTAGATGTCGAGGTCCTTGTTCACCAGCTCTGTGGTCCTCATaGCGATCATCATTTCTCTGTACTTTTCCTCGGCATCCCGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: CSRCRGPCSPALWSS*RSSFLCTFPRHPGT Trigger: AGTTCCGGGATGCCGAGGAAAAGTACAGAGAAATGATGATCGTCATGAGGACCACAGAGCTGGTGAACAAGGACCTCGACATCTACTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CCA 90 bp | TGCCTCTGCTTCAGAGCTTCTTTGTCTGTCAGGTCGCTCAAGAGCTaGCTGGCAGTTTTAGCTTCTCTTTCCTGTCTCTCTTTCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CLCFRASLSVRSLKS*LAVLASLSCLSFTS Trigger: ACTTGTGAAAGAGAGACAGGAAAGAGAAGCTAAAACTGCCAGCCAGCTCTTGAGCGACCTGACAGACAAAGAAGCTCTGAAGCAGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | TCTCCTTTCCAGCCACAGGAGAACCTGCTATTGAGAGTAACTGGGGCCAGGCCAACAAATGTATTTCCTTaGGTTCCAGGAGGGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: SPFQPQENLLLRVTGARPTNVFP*VPGGKS Trigger: AGATTTCCCTCCTGGAACCAAAGGAAATACATTTGT...TGGCCTGGCCCCAGTTACTCTCAATAGCAGGTTCTCCTGTGGCTGGAAAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | CAGATGAGGTCAGGACTGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATTGTTTAGCACAGACTaGGAAACCCCAAGACAACTT | + |
|
Preference number: 5 (lower is better) Translates to: QMRSGLGKLFSNSQPGYLLFSTD*ETPRQL Trigger: AAGTTGTCTTGGGGTTTCCAAGTCTGTGCTAAACAA...TAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCAGTCCTGACCTCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | GGGAGTAAACTGCTGTGGCTCCTGCCAGCATGGCTCGCTGCTTTGAGGACTTTTCTGCTCATCAGTCCCTaGAAAAACCTTTTCCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSKLLWLLPAWLAALRTFLLISP*KNLFHF Trigger: AAAATGGAAAAGGTTTTTCAAGGGACTGATGAGCAG...AAAAGTCCTCAAAGCAGCGAGCCATGCTGGCAGGAGCCACAGCAGTTTACTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | TGTTCTAGAGGTGACACCCAACAAATCTGCAGATGGCACAGAACAGGCCACCCAGCATGGCTCGCTGCTTaGAGGACTTTTCAATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CSRGDTQQICRWHRTGHPAWLAA*RTFQFL Trigger: AAGAAATTGAAAAGTCCTCAAAGCAGCGAGCCATGC...TGGGTGGCCTGTTCTGTGCCATCTGCAGATTTGTTGGGTGTCACCTCTAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | TGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATGGCTGCATTCCGATTCTGTTGACTaGAGTTTATCTGGAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WGNSSLTASQGTYLVWLHSDSVD*SLSGAS Trigger: GCTTGCTCCAGATAAACTCAAGTCAACAGAATCGGA...ATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | CAGATGAGGTCAGGACTGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTACTTCTTCAGGCATTATaGTACCCAAGAGTGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QMRSGLGKLFSNSQPGYLLLQAL*YPRVFP Trigger: AGGAAACACTCTTGGGTACAATAATGCCTGAAGAAG...TAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCAGTCCTGACCTCATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS TCA 90 bp | TCCACATACTCAGATCGCCCTAAGAGCTCCACAAAATCTTCATCGTaGGTGATTACCAGAAGTTGGAAGTTGCGCTGCTGTGAGCGACTT | + |
|
Preference number: 5 (lower is better) Translates to: STYSDRPKSSTKSSS*VITRSWKLRCCERL Trigger: AAGTCGCTCACAGCAGCGCAACTTCCAACTTCTGGTAATCACTCACGATGAAGATTTTGTGGAGCTCTTAGGGCGATCTGAGTATGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS TCA 90 bp | GTGAACATAAGAACCCAGGGAGCTGATGCTGCACTTGACAATCTCTaGGCACTGGTCCATGTTCTTCTTCACCCTGTAGAATTTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VNIRTQGADAALDNL*ALVHVLLHPVEFLH Trigger: GTGGAGAAATTCTACAGGGTGAAGAAGAACATGGACCAGTGCTCAGAGATTGTCAAGTGCAGCATCAGCTCCCTGGGTTCTTATGTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CAA 90 bp | GAAGCGTGTGACTTAGATGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGTCGATTTCTGCACATTaGGAGCTGAGACTGACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EACDLDVSCLHRRLQLAMSISAH*ELRLTF Trigger: AAAAGTCAGTCTCAGCTCCAAATGTGCAGAAATCGA...CATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACATCTAAGTCACACGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CAA 90 bp | ATTCAGTTGGCAGGAAATGAAAGGCTGAGTGGTGCTGGGAGGTTGCTAGGCCTGCCAGTTGGAGTCTTCTaGGTGACAGAAAATAACATT | + |
|
Preference number: 5 (lower is better) Translates to: IQLAGNERLSGAGRLLGLPVGVF*VTENNI Trigger: AATGTTATTTTCTGTCACCAAGAAGACTCCAACTGG...CAGGCCTAGCAACCTCCCAGCACCACTCAGCCTTTCATTTCCTGCCAACTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTGGAGATGTGTACTGTTATCTTTCTCCATTaGTTTCTTTCGGCTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CVLSSQEASAGNAVEMCTVIFLH*FLSALQ Trigger: TTGGAGAGCCGAAAGAAACAAATGGAGAAAGATAAC...AGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CAA 90 bp | CCTGTGCTGCTTTTCCTGCTTTTCCTGGTTAACCTGCTGGACAGTCCGGTCCAAGTTATCTTTCTCCATTaGTTTCTTTCGGCTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PVLLFLLFLVNLLDSPVQVIFLH*FLSALQ Trigger: TTGGAGAGCCGAAAGAAACAAATGGAGAAAGATAAC...TTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGAAACTCTTCTCTAACAGCCAGCCAGGGTACCTATCTGGTATGGCTGCATTTGTCAGTTTTGTCTTaGGTGAGCATCTCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WGNSSLTASQGTYLVWLHLSVLS*VSISIC Trigger: ACAGATGGAGATGCTCACCAAAGACAAAACTGACAA...ATGCAGCCATACCAGATAGGTACCCTGGCTGGCTGTTAGAGAAGAGTTTCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CAA 90 bp | TGTTCTAGAGGTGACACCCAACAAATCTGCAGATGGCACAGAACAGGCCACCCATTTACTTTTCAGGTGTaGGATTTGTTCCTGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CSRGDTQQICRWHRTGHPFTFQV*DLFLLV Trigger: GACCAGCAGGAACAAATCCAACACCTGAAAAGTAAA...TGGGTGGCCTGTTCTGTGCCATCTGCAGATTTGTTGGGTGTCACCTCTAGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CAA 90 bp | CTCCCGATCTTAGGGACTCTCAAACCTGACACACATGGTTCCCGTCACACAATCCATCTCCTTCAAGTGTaGTTTTCGTTCTTCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPILGTLKPDTHGSRHTIHLLQV*FSFFFH Trigger: GTGGAAGAAGAACGAAAACAACACTTGAAGGAGATG...GATTGTGTGACGGGAACCATGTGTGTCAGGTTTGAGAGTCCCTAAGATCGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CAA 90 bp | CTCCCGATCTTAGGGACTCTCAAACCTGACACACATGGTTCCCGTCACACAATCTATGTATTCAATATCTaGCCCACGATAGGTACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPILGTLKPDTHGSRHTIYVFNI*PTIGTP Trigger: CGGAGTACCTATCGTGGGCAAGATATTGAATACATA...GATTGTGTGACGGGAACCATGTGTGTCAGGTTTGAGAGTCCCTAAGATCGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
||
| CDS-3UTR CAA 90 bp | GTCAGCACTGTTTATCTGGATGACATTCAGTTGGCAGGAAATGAAAGGCTGAGTGAGCTGATGCTGCACTaGACAATCTCTGAGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSTVYLDDIQLAGNERLSELMLH*TISEHW Trigger: CCAGTGCTCAGAGATTGTCAAGTGCAGCATCAGCTC...ACTCAGCCTTTCATTTCCTGCCAACTGAATGTCATCCAGATAAACAGTGCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CCA 90 bp | CATCCAATTCAAGATGTGTTGCCAAAGACTGAATTAATGAGTCTCTaGCTCGGATGTGCTCTTGATGGCGATCTGCCTGTAGCTGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HPIQDVLPKTELMSL*LGCALDGDLPVAVD Trigger: GTCTACAGCTACAGGCAGATCGCCATCAAGAGCACATCCGAGCCAGAGACTCATTAATTCAGTCTTTGGCAACACATCTTGAATTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | TGTTCTAGAGGTGACACCCAACAAATCTGCAGATGGCACAGAACAGGCCACCCACTGCTCATCAGTCCCTaGAAAAACCTTTTCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: CSRGDTQQICRWHRTGHPLLISP*KNLFHF Trigger: AAAATGGAAAAGGTTTTTCAAGGGACTGATGAGCAG...TGGGTGGCCTGTTCTGTGCCATCTGCAGATTTGTTGGGTGTCACCTCTAGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | CTGCATGATGGGCAGATGAGGTCAGGACTGGGGAAACTCTTCTCTAACAGCCAGCCAATTCAAGATGTGTaGCCAAAGACTGAATTAATG | + |
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Preference number: 5 (lower is better) Translates to: LHDGQMRSGLGKLFSNSQPIQDV*PKTELM Trigger: CATTAATTCAGTCTTTGGCAACACATCTTGAATTGG...CTGGCTGTTAGAGAAGAGTTTCCCCAGTCCTGACCTCATCTGCCCATCATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | CCTGTGCTGCTTTTCCTGCTTTTCCTGGTTAACCTGCTGGACAGTCCGGTCCAACCAATTCAAGATGTGTaGCCAAAGACTGAATTAATG | + |
|
Preference number: 5 (lower is better) Translates to: PVLLFLLFLVNLLDSPVQPIQDV*PKTELM Trigger: CATTAATTCAGTCTTTGGCAACACATCTTGAATTGG...TTGGACCGGACTGTCCAGCAGGTTAACCAGGAAAAGCAGGAAAAGCAGCACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | GTTTATCTGGATGACATTCAGTTGGCAGGAAATGAAAGGCTGAGTGGTGCTGGGTCTGTGTGCGGGTTGTaGTATGATGGTTTAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VYLDDIQLAGNERLSGAGSVCGL*YDGLTA Trigger: AGCAGTTAAACCATCATACAACAACCCGCACACAGA...CCCAGCACCACTCAGCCTTTCATTTCCTGCCAACTGAATGTCATCCAGATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | TGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTGGAGATGTGTACTATCACTTTCCAAATCTaGGCTACCACAAACATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CVLSSQEASAGNAVEMCTITFQI*ATTNIK Trigger: TTTGATGTTTGTGGTAGCCAAGATTTGGAAAGTGAT...AGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | TGTGTCCTGTCTTCACAGGAGGCTTCAGCTGGCAATGCCGTGGAGATGTGTACTCTGACTTCAGCTCATTaGTTTTACTTTTCAGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: CVLSSQEASAGNAVEMCTLTSAH*FYFSGV Trigger: AACACCTGAAAAGTAAAACAAATGAGCTGAAGTCAG...AGTACACATCTCCACGGCATTGCCAGCTGAAGCCTCCTGTGAAGACAGGACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS TCA 90 bp | CATACTCAGATCGCCCTAAGAGCTCCACAAAATCTTCATCGTGAGTaGTTACCAGAAGTTGGAAGTTGCGCTGCTGTGAGCGACTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HTQIALRAPQNLHRE*LPEVGSCAAVSDFL Trigger: TAAAAAGTCGCTCACAGCAGCGCAACTTCCAACTTCTGGTAATCACTCACGATGAAGATTTTGTGGAGCTCTTAGGGCGATCTGAGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS TCA 90 bp | ACAATTTCCTGCGAAGACGCTAACTGGGCTTCCTTACTCGTAATCTaGTCTCGGATCTCACACGCTTTCTCCTTATTTTGCTTCAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: TISCEDANWASLLVI*SRISHAFSLFCFRY Trigger: ATATCTGAAGCAAAATAAGGAGAAAGCGTGTGAGATCCGAGATCAGATTACGAGTAAGGAAGCCCAGTTAGCGTCTTCGCAGGAAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS CCA 90 bp | TATTTTAGACAGGTTGTGTTCAATCTCTTTCAGGCGATTCTTCAATaGCTCAAGCTCATCCTCGTAGGACCTGACAATTTCCTGCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YFRQVVFNLFQAILQ*LKLILVGPDNFLRR Trigger: TCTTCGCAGGAAATTGTCAGGTCCTACGAGGATGAGCTTGAGCCATTGAAGAATCGCCTGAAAGAGATTGAACACAACCTGTCTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | TGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCAGCTCTGCTTTTTCCTGGTaGAGGAGCCGTGCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: WSCISLRFNSILLVTVSSSAFSW*RSRASL Trigger: TAAAGAAGCACGGCTCCTCAACCAGGAAAAAGCAGA...GCTGGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | GTTTATCTGGATGACATTCAGTTGGCAGGAAATGAAAGGCTGAGTGGTGCTGGGCTCCAAAGGGCTTATTaGTTCTTTAGCATCCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: VYLDDIQLAGNERLSGAGLQRAY*FFSILY Trigger: ATAAAGGATGCTAAAGAACAAATAAGCCCTTTGGAG...CCCAGCACCACTCAGCCTTTCATTTCCTGCCAACTGAATGTCATCCAGATAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS-3UTR CAA 90 bp | CTCCATGATTGTAACATCTGTCAGGCACACTTTAGCACTTTCTTCTTCAGGCATGCTGAAGCTAGCTCTTaGTTTGTCTTTGGTGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LHDCNICQAHFSTFFFRHAEASS*FVFGEH Trigger: ATGCTCACCAAAGACAAACAAAGAGCTAGCTTCAGC...ATGCCTGAAGAAGAAAGTGCTAAAGTGTGCCTGACAGATGTTACAATCATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS TCA 90 bp | TTCAAAGCCTTTCCTTCACTTAAAGGCCAGTTGGAGTCTTCTTGGTaGCAGAAAATAACATTGTTTAGCACAGACTTGGAAACCCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FKAFPSLKGQLESSW*QKITLFSTDLETPR Trigger: TCTTGGGGTTTCCAAGTCTGTGCTAAACAATGTTATTTTCTGTCACCAAGAAGACTCCAACTGGCCTTTAAGTGAAGGAAAGGCTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | GTAACATCTGTCAGGCACACTTTAGCACTTTCTTCTTCAGGCATTATTGTACCCACAAATGTATTTCCTTaGGTTCCAGGAGGGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: VTSVRHTLALSSSGIIVPTNVFP*VPGGKS Trigger: AGATTTCCCTCCTGGAACCAAAGGAAATACATTTGT...GGGTACAATAATGCCTGAAGAAGAAAGTGCTAAAGTGTGCCTGACAGATGTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | TGCTGGTCCTGTATAAGCTTACGGTTCAATTCAATCTTACTGGTAACTGTATCCTCGATTTCTGCACATTaGGAGCTGAGACTGACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CWSCISLRFNSILLVTVSSISAH*ELRLTF Trigger: AAAAGTCAGTCTCAGCTCCAAATGTGCAGAAATCGA...GGATACAGTTACCAGTAAGATTGAATTGAACCGTAAGCTTATACAGGACCAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS-3UTR CAA 90 bp | ACTTTAGCACTTTCTTCTTCAGGCATTATTGTACCCAAGAGTGTTTCCTGCTCTCCAGTTGGAGTCTTCTaGGTGACAGAAAATAACATT | + |
|
Preference number: 5 (lower is better) Translates to: TLALSSSGIIVPKSVSCSPVGVF*VTENNI Trigger: AATGTTATTTTCTGTCACCAAGAAGACTCCAACTGG...AGAGCAGGAAACACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128483.8 |
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| CDS GCA 90 bp | TTTAAAGTGAAGAATTTCGTCTTCATAGCCTTTCTGACGCCCCAATaGCAAACTGTGATTTCTCTTTATAGTGTCTATGTTCTCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FKVKNFVFIAFLTPQ*QTVISLYSVYVLFQ Trigger: TTGGAAGAGAACATAGACACTATAAAGAGAAATCACAGTTTGGCATTGGGGCGTCAGAAAGGCTATGAAGACGAAATTCTTCACTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS GCA 72 bp | TCCAGTTCCAGAATCCTGTCGGAGGAGCCCTCCAGCTaGTGCAGCTCACTCCTCACGTGCCGCAGCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRILSEEPSS*CSSLLTCRSSL Trigger: GAGCGAGCTGCGGCACGTGAGGAGTGAGCTGCAGCAGCTGGAGGGCTCCTCCGACAGGATTCTGGAACTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS GCA 72 bp | CCGCTCTTCCTGTCCCTCAGCTCATCAAGCTGCCTCTaGTTCAGAGCTTCTTTGTCTGTCAGGTCGCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLFLSLSSSSCL*FRASLSVRSLK Trigger: CTTGAGCGACCTGACAGACAAAGAAGCTCTGAAGCAGAGGCAGCTTGATGAGCTGAGGGACAGGAAGAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS GCA 72 bp | GGTCGAGATTTGTTGTCGGCTCATCCAAGGCAAGGATaGCACAGTTCAGACAGAAGGTTTCCGCCAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRDLLSAHPRQG*HSSDRRFPPGP Trigger: TGGCCCTGGCGGAAACCTTCTGTCTGAACTGTGGCATCCTTGCCTTGGATGAGCCGACAACAAATCTCGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CCA 72 bp | GCCTTGCTTAATTCACGTTCAGCTTTCGTGAGCTCCTaGTCCAGTTCCAGAATCCTGTCGGAGGAGCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALLNSRSAFVSS*SSSRILSEEPS Trigger: GGAGGGCTCCTCCGACAGGATTCTGGAACTGGACCAGGAGCTCACGAAAGCTGAACGTGAATTAAGCAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020649.14 ENSMUST00000128483.8 |
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| CDS CCA 72 bp | ATCTGTTCATCTTTGTCAGTAGCTTTCGTGAGCTCCTaGTCCAGTTCCAGAATCCTGTCGGAGGAGCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ICSSLSVAFVSS*SSSRILSEEPS Trigger: GGAGGGCTCCTCCGACAGGATTCTGGAACTGGACCAGGAGCTCACGAAAGCTACTGACAAAGATGAACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124352.2 |
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| CDS TCA 72 bp | GACCCTGCTCCACAAGCAGCTCTGCTTTTTCCTGGTTaGGGAGCCGTGCTTCTTTATTCAGCTTCTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: DPAPQAALLFPG*GAVLLYSASPV Trigger: AACTGGAGAAGCTGAATAAAGAAGCACGGCTCCTCAACCAGGAAAAAGCAGAGCTGCTTGTGGAGCAGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS TCA 72 bp | GATTCTTCAATGGCTCAAGCTCATCCTCGTAGGACCTaGCAATTTCCTGCGAAGACGCTAACTGGGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: DSSMAQAHPRRT*QFPAKTLTGLP Trigger: AGGAAGCCCAGTTAGCGTCTTCGCAGGAAATTGTCAGGTCCTACGAGGATGAGCTTGAGCCATTGAAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS TCA 72 bp | AGAACCCAGGGAGCTGATGCTGCACTTGACAATCTCTaGGCACTGGTCCATGTTCTTCTTCACCCTGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RTQGADAALDNL*ALVHVLLHPVE Trigger: TTCTACAGGGTGAAGAAGAACATGGACCAGTGCTCAGAGATTGTCAAGTGCAGCATCAGCTCCCTGGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CAA 90 bp | CCAAAGCATGTGCAAGAGACTCAATGTTTTCTCGGTCGAGATTTGTaGTCGGCTCATCCAAGGCAAGGATGCCACAGTTCAGACAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PKHVQETQCFLGRDL*SAHPRQGCHSSDRR Trigger: CCTTCTGTCTGAACTGTGGCATCCTTGCCTTGGATGAGCCGACAACAAATCTCGACCGAGAAAACATTGAGTCTCTTGCACATGCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS TCA 72 bp | TTGGTGAGCATCTCCATCTGTGTGCGGGTTGTTGTATaGTGGTTTAACTGCTCCATCTCCTGGTCCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LVSISICVRVVV*WFNCSISWSSF Trigger: AAAGCTGGACCAGGAGATGGAGCAGTTAAACCATCATACAACAACCCGCACACAGATGGAGATGCTCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020649.14 ENSMUST00000128483.8 |
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| CDS TCA 72 bp | ATCGCCCTAAGAGCTCCACAAAATCTTCATCGTGAGTaGTTACCAGAAGTTGGAAGTTGCGCTGCTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: IALRAPQNLHRE*LPEVGSCAAVS Trigger: GCTCACAGCAGCGCAACTTCCAACTTCTGGTAATCACTCACGATGAAGATTTTGTGGAGCTCTTAGGGCGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CCA 72 bp | TTCAGAGCTTCTTTGTCTGTCAGGTCGCTCAAGAGCTaGCTGGCAGTTTTAGCTTCTCTTTCCTGTCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FRASLSVRSLKS*LAVLASLSCLS Trigger: AGAGAGACAGGAAAGAGAAGCTAAAACTGCCAGCCAGCTCTTGAGCGACCTGACAGACAAAGAAGCTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS CAA 72 bp | GTGCAAGAGACTCAATGTTTTCTCGGTCGAGATTTGTaGTCGGCTCATCCAAGGCAAGGATGCCACAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VQETQCFLGRDL*SAHPRQGCHSS Trigger: TGAACTGTGGCATCCTTGCCTTGGATGAGCCGACAACAAATCTCGACCGAGAAAACATTGAGTCTCTTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CAA 72 bp | CATGTGCAAGAGACTCAATGTTTTCTCGGTCGAGATTaGTTGTCGGCTCATCCAAGGCAAGGATGCCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: HVQETQCFLGRD*LSAHPRQGCHS Trigger: ACTGTGGCATCCTTGCCTTGGATGAGCCGACAACAAATCTCGACCGAGAAAACATTGAGTCTCTTGCACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CAA 90 bp | CAACCAAAGCATGTGCAAGAGACTCAATGTTTTCTCGGTCGAGATTaGTTGTCGGCTCATCCAAGGCAAGGATGCCACAGTTCAGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPKHVQETQCFLGRD*LSAHPRQGCHSSDR Trigger: TCTGTCTGAACTGTGGCATCCTTGCCTTGGATGAGCCGACAACAAATCTCGACCGAGAAAACATTGAGTCTCTTGCACATGCTTTGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS TCA 72 bp | TGCGAAGACGCTAACTGGGCTTCCTTACTCGTAATCTaGTCTCGGATCTCACACGCTTTCTCCTTATTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CEDANWASLLVI*SRISHAFSLFC Trigger: GCAAAATAAGGAGAAAGCGTGTGAGATCCGAGATCAGATTACGAGTAAGGAAGCCCAGTTAGCGTCTTCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS TCA 72 bp | TCAGATCGCCCTAAGAGCTCCACAAAATCTTCATCGTaGGTGATTACCAGAAGTTGGAAGTTGCGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SDRPKSSTKSSS*VITRSWKLRCC Trigger: ACAGCAGCGCAACTTCCAACTTCTGGTAATCACTCACGATGAAGATTTTGTGGAGCTCTTAGGGCGATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CCA 72 bp | CAAGATGTGTTGCCAAAGACTGAATTAATGAGTCTCTaGCTCGGATGTGCTCTTGATGGCGATCTGCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: QDVLPKTELMSL*LGCALDGDLPV Trigger: TACAGGCAGATCGCCATCAAGAGCACATCCGAGCCAGAGACTCATTAATTCAGTCTTTGGCAACACATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS CAA 90 bp | ATTACCTCTGCTTTTAGGGTTTCTATGCTGCTATTTTTCTCGGCCTaGCTTAATTCACGTTCAGCTTTCGTGAGCTCCTGGTCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ITSAFRVSMLLFFSA*LNSRSAFVSSWSSS Trigger: GGAACTGGACCAGGAGCTCACGAAAGCTGAACGTGAATTAAGCAAGGCCGAGAAAAATAGCAGCATAGAAACCCTAAAAGCAGAGGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020649.14 ENSMUST00000128483.8 |
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| CDS TCA 72 bp | GTGAGTGATTACCAGAAGTTGGAAGTTGCGCTGCTGTaGGCGACTTTTTATGATCTCAACCAAAGCATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSDYQKLEVALL*ATFYDLNQSMC Trigger: GCACATGCTTTGGTTGAGATCATAAAAAGTCGCTCACAGCAGCGCAACTTCCAACTTCTGGTAATCACTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CCA 72 bp | TTTCGCAAGCTCCTGTCCAGGTCAGCTTTCTCATTTTaGAGGCTCATTACCTCTGCTTTTAGGGTTTCTATG | + |
|
Preference number: 6 (lower is better) Translates to: FRKLLSRSAFSF*RLITSAFRVSM Trigger: CATAGAAACCCTAAAAGCAGAGGTAATGAGCCTCCAAAATGAGAAAGCTGACCTGGACAGGAGCTTGCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020649.14 ENSMUST00000128483.8 |
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| CDS CAA 72 bp | GCTTTTAGGGTTTCTATGCTGCTATTTTTCTCGGCCTaGCTTAATTCACGTTCAGCTTTCGTGAGCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AFRVSMLLFFSA*LNSRSAFVSSW Trigger: CCAGGAGCTCACGAAAGCTGAACGTGAATTAAGCAAGGCCGAGAAAAATAGCAGCATAGAAACCCTAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020649.14 ENSMUST00000128483.8 |
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| CDS CAA 90 bp | GAAACCCCAAGACAACTTATCATTTCTCTGTCGATTTCTGCACATTaGGAGCTGAGACTGACTTTTTCACCATGCTTCATTCTAGTAATG | + |
|
Preference number: 6 (lower is better) Translates to: ETPRQLIISLSISAH*ELRLTFSPCFILVM Trigger: CATTACTAGAATGAAGCATGGTGAAAAAGTCAGTCTCAGCTCCAAATGTGCAGAAATCGACAGAGAAATGATAAGTTGTCTTGGGGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS GCA 72 bp | TCTGCACATTTGGAGCTGAGACTGACTTTTTCACCATaGTTCATTCTAGTAATGACTCCTTCCAAGGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SAHLELRLTFSP*FILVMTPSKVL Trigger: TAAAACCTTGGAAGGAGTCATTACTAGAATGAAGCATGGTGAAAAAGTCAGTCTCAGCTCCAAATGTGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS GCA 72 bp | AAGAATTTCGTCTTCATAGCCTTTCTGACGCCCCAATaGCAAACTGTGATTTCTCTTTATAGTGTCTATGTT | + |
|
Preference number: 6 (lower is better) Translates to: KNFVFIAFLTPQ*QTVISLYSVYV Trigger: AACATAGACACTATAAAGAGAAATCACAGTTTGGCATTGGGGCGTCAGAAAGGCTATGAAGACGAAATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020649.14 |
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| CDS CAA 72 bp | AGACAACTTATCATTTCTCTGTCGATTTCTGCACATTaGGAGCTGAGACTGACTTTTTCACCATGCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: RQLIISLSISAH*ELRLTFSPCFI Trigger: AATGAAGCATGGTGAAAAAGTCAGTCTCAGCTCCAAATGTGCAGAAATCGACAGAGAAATGATAAGTTGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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| CDS CAA 90 bp | CTTACTCGTAATCTGATCTCGGATCTCACACGCTTTCTCCTTATTTaGCTTCAGATATTTCAATTCCGTTTGACACTCTTTTACTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTRNLISDLTRFLLI*LQIFQFRLTLFYFL Trigger: CAGAAAGTAAAAGAGTGTCAAACGGAATTGAAATATCTGAAGCAAAATAAGGAGAAAGCGTGTGAGATCCGAGATCAGATTACGAGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020649.14 ENSMUST00000124352.2 ENSMUST00000128483.8 |
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