Pregenerated sensors for RAD18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030254Ensembl transcript IDs: ENSMUST00000068487.12, ENSMUST00000077088.11, ENSMUST00000113180.8, ENSMUST00000113182.8, ENSMUST00000142079.2, ENSMUST00000156063.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTaGTTAGGACAAGAGCATGCACACTCTCAGCGGCAGGCTTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: SNCGGLAAGAPTKGV*LGQEHAHSQRQACN Trigger: GTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR TCA 90 bp | TCCGGCCTCTCAGGCTCCGACGGGCCTGGCGAGTCCAGCTGGGGCTaGGGAAAGTGGTTTGTTACTGAGACAGTATCTGAGAAGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: SGLSGSDGPGESSWG*GKWFVTETVSEKLT Trigger: TGTGAGCTTCTCAGATACTGTCTCAGTAACAAACCACTTTCCTCAGCCCCAGCTGGACTCGCCAGGCCCGTCGGAGCCTGAGAGGCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| 3UTR GCA 90 bp | GGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGCGGCAGGCTTaGAACTGTCAAGAGGATGAAAAGCTGCTTCTGAGGTTTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: GVWLGQEHAHSQRQA*NCQEDEKLLLRFGP Trigger: GGGACCAAACCTCAGAAGCAGCTTTTCATCCTCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAACCACACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR GCA 90 bp | CAGTGTTTCTGCAGGTTCATCTGCTCTCATCAACGGCAGTGTCTCTaGAGGTTCATCTGTTCTCATCGACGGCAGTGTCTCTGCAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: QCFCRFICSHQRQCL*RFICSHRRQCLCRF Trigger: GAACCTGCAGAGACACTGCCGTCGATGAGAACAGATGAACCTGCAGAGACACTGCCGTTGATGAGAGCAGATGAACCTGCAGAAACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| 3UTR GCA 90 bp | GCTCACATTATCTTCTTGTGCGATACACTCAGACGGCAGTGTTTCTaGAGGTTCATCTGCTCTCATCAACGGCAGTGTCTCTGCAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: AHIIFLCDTLRRQCF*RFICSHQRQCLCRF Trigger: GAACCTGCAGAGACACTGCCGTTGATGAGAGCAGATGAACCTGCAGAAACACTGCCGTCTGAGTGTATCGCACAAGAAGATAATGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGTAACTGCGGTGGCCTaGCAGCAGGCGCTCCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: PDPSGRTLRVITLSATSEVTAVA*QQALPP Trigger: TGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTAC...TTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCGAAATGTATACTCTGTaGAAAGCTGGTGAGTATGAT | + |
|
Preference number: 2 (lower is better) Translates to: GSRRSHQGCVVRTRACTLEMYTL*KAGEYD Trigger: ATCATACTCACCAGCTTTGCACAGAGTATACATTTC...GAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGTACTAAGCAGTAACTaGGGTGGCCTGGCAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PDPSGRTLRVITLSATSEVLSSN*GGLAAG Trigger: GCCTGCTGCCAGGCCACCGCAGTTACTGCTTAGTAC...TTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTGTTTGTTTAACAGCTGGGATTCAAAGTGTTAGAGATCTGCCTGACCCCGTACTAAGCAGTAACTaGGGTGGCCTGGCAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LFVCLTAGIQSVRDLPDPVLSSN*GGLAAG Trigger: GCCTGCTGCCAGGCCACCGCAGTTACTGCTTAGTAC...GGGGTCAGGCAGATCTCTAACACTTTGAATCCCAGCTGTTAAACAAACAAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR-3UTR TCA 90 bp | AACTTGTACACATGTCTTACCTATTGCATGAGTCTGAGTCCGAGGAGAAAAGAAGAGTCCAGCTGGGGCTaGGGAAAGTGGTTTGTTACT | + |
|
Preference number: 2 (lower is better) Translates to: NLYTCLTYCMSLSPRRKEESSWG*GKWFVT Trigger: AGTAACAAACCACTTTCCTCAGCCCCAGCTGGACTC...TTCTTTTCTCCTCGGACTCAGACTCATGCAATAGGTAAGACATGTGTACAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| 3UTR-3UTR TCA 90 bp | GACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGGACAACTGTCAAGAGGATaGAAAGCTGCTTCTGAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: DPSGRTLRVITLSATSEGQLSRG*KAASEV Trigger: AACCTCAGAAGCAGCTTTTCATCCTCTTGACAGTTG...TCCTTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTGCAGGTTCATCTGCTCTCATCAACGGCAGTGTCTCTGCAGGTTCATCTTGGAATGCATTCTGGTaGTTTTTACGATATTCACTG | + |
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Preference number: 2 (lower is better) Translates to: VSAGSSALINGSVSAGSSWNAFW*FLRYSL Trigger: CAGTGAATATCGTAAAAAGCACCAGAATGCATTCCA...AGATGAACCTGCAGAGACACTGCCGTTGATGAGAGCAGATGAACCTGCAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTGTACACATGTCTTACCTATTGCATGAGTCTGAGTCCGAGGAGAAAAGAACACCAGAAGCTGGAATaGATTCTGGTGCTTTTTACG | + |
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Preference number: 2 (lower is better) Translates to: NLYTCLTYCMSLSPRRKEHQKLE*ILVLFT Trigger: CGTAAAAAGCACCAGAATGCATTCCAGCTTCTGGTG...TTCTTTTCTCCTCGGACTCAGACTCATGCAATAGGTAAGACATGTGTACAAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAAGAATATCAGTACAACTAGAAGAATCATCCGGCCTCTCAGGCTCCGACAGCTGGAATGCATTCTaGTGCTTTTTACGATATTCA | + |
|
Preference number: 2 (lower is better) Translates to: EKRISVQLEESSGLSGSDSWNAF*CFLRYS Trigger: TGAATATCGTAAAAAGCACCAGAATGCATTCCAGCT...GTCGGAGCCTGAGAGGCCGGATGATTCTTCTAGTTGTACTGATATTCTTTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| 3UTR-3UTR GCA 90 bp | GACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGGAGAAATGTATACTCTGTaGAAAGCTGGTGAGTATGAT | + |
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Preference number: 2 (lower is better) Translates to: DPSGRTLRVITLSATSEGEMYTL*KAGEYD Trigger: ATCATACTCACCAGCTTTGCACAGAGTATACATTTC...TCCTTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAAGAGAACCAACTTGTACACATGTCTTACCTATTGCATGAGTCTGAGTCCGCAGCTTGTGAAACTCTaGCAGTTTTCTTATACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: FKRTNLYTCLTYCMSLSPQLVKL*QFSYTL Trigger: AAGGGTATAAGAAAACTGGCAGAGTTTCACAAGCTG...CGGACTCAGACTCATGCAATAGGTAAGACATGTGTACAAGTTGGTTCTCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| 3UTR CCA 72 bp | GGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTaGTTAGGACAAGAGCATGCACACTCTCAGCGGCAG | + |
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Preference number: 3 (lower is better) Translates to: GGLAAGAPTKGV*LGQEHAHSQRQ Trigger: CTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR GCA 72 bp | CGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATaGACACTCTCAGCGGCAGGCTTGCAACTGTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: RSHQGCVVRTRA*TLSAAGLQLSR Trigger: TCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR TCA 72 bp | ACACTCTCAGCGGCAGGCTTGCAACTGTCAAGAGGATaGAAAGCTGCTTCTGAGGTTTGGTCCCCAGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: TLSAAGLQLSRG*KAASEVWSPVE Trigger: TTCCACTGGGGACCAAACCTCAGAAGCAGCTTTTCATCCTCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR-3UTR CAA 90 bp | GGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCGTGTTTGTTTTGTTGTaGTTCAGGAAGGCAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSRRSHQGCVVRTRACTLVFVLL*FRKAKK Trigger: CTTCTTTGCCTTCCTGAACAACAACAAAACAAACAC...GAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACATGTGTGTTTGTTTTGTaGTTGTTCAGGAAGGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: PGSRRSHQGCVVRTRACTCVFVL*LFRKAK Trigger: CTTTGCCTTCCTGAACAACAACAAAACAAACACACA...TGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR GCA 72 bp | TTAGGACAAGAGCATGCACACTCTCAGCGGCAGGCTTaGAACTGTCAAGAGGATGAAAAGCTGCTTCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: LGQEHAHSQRQA*NCQEDEKLLLR Trigger: CCTCAGAAGCAGCTTTTCATCCTCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR GCA 72 bp | GATACACTCAGACGGCAGTGTTTCTGCAGGTTCATCTaGTCTCATCAACGGCAGTGTCTCTGCAGGTTCATC | + |
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Preference number: 3 (lower is better) Translates to: DTLRRQCFCRFI*SHQRQCLCRFI Trigger: GATGAACCTGCAGAGACACTGCCGTTGATGAGAGCAGATGAACCTGCAGAAACACTGCCGTCTGAGTGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| 3UTR GCA 72 bp | ATCTTCTTGTGCGATACACTCAGACGGCAGTGTTTCTaGAGGTTCATCTGCTCTCATCAACGGCAGTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: IFLCDTLRRQCF*RFICSHQRQCL Trigger: GAGACACTGCCGTTGATGAGAGCAGATGAACCTGCAGAAACACTGCCGTCTGAGTGTATCGCACAAGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGGACAAGAGCATGCACACTCTCAGCGGCAGGCTTGCAACTGTCAAGAGGATTGTGTGTTTGTTTTGTaGTTGTTCAGGAAGGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: LGQEHAHSQRQACNCQEDCVFVL*LFRKAK Trigger: CTTTGCCTTCCTGAACAACAACAAAACAAACACACA...ATCCTCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGTGTTTGTTTTGTTGTaGTTCAGGAAGGCAAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: PDPSGRTLRVITLSATSEVFVLL*FRKAKK Trigger: CTTCTTTGCCTTCCTGAACAACAACAAAACAAACAC...TTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR GCA 72 bp | CCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTaGCACTTCAGAAGGACATACATATGCTTCAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: PQWKNTKSDNFK*HFRRTYICFSH Trigger: ATGACTGAAGCATATGTATGTCCTTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR-3UTR CAA 90 bp | AATAGAGAAGTCAAACCAAGGAAAACGCTCCCGCTAAGAAATGTATACTCTGTGGTGTTTGTTTTGTTGTaGTTCAGGAAGGCAAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: NREVKPRKTLPLRNVYSVVFVLL*FRKAKK Trigger: CTTCTTTGCCTTCCTGAACAACAACAAAACAAACAC...CACAGAGTATACATTTCTTAGCGGGAGCGTTTTCCTTGGTTTGACTTCTCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR TCA 72 bp | GGGGAGAAATGTCTCAAAGGAAAGGAAGGAACCAACTaGCTAAGAAGAGTCATTTCAGAACATTTCACGTTT | + |
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Preference number: 3 (lower is better) Translates to: GEKCLKGKEGTN*LRRVISEHFTF Trigger: AAACGTGAAATGTTCTGAAATGACTCTTCTTAGTCAGTTGGTTCCTTCCTTTCCTTTGAGACATTTCTCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| 3UTR GCA 72 bp | TTTAAGAGAACCAACTTGTACACATGTCTTACCTATTaGATGAGTCTGAGTCCGAGGAGAAAAGAATATCAG | + |
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Preference number: 3 (lower is better) Translates to: FKRTNLYTCLTY*MSLSPRRKEYQ Trigger: CTGATATTCTTTTCTCCTCGGACTCAGACTCATGCAATAGGTAAGACATGTGTACAAGTTGGTTCTCTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| CDS-3UTR TCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGAGAGTCCAGCTGGGGCTaGGGAAAGTGGTTTGTTACT | + |
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Preference number: 4 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGESSWG*GKWFVT Trigger: AGTAACAAACCACTTTCCTCAGCCCCAGCTGGACTC...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR GCA 90 bp | CCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACAGCTCACACAGCCCTGTaGTACCTGTTTGCCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: PGSRRSHQGCVVRTRACTAHTAL*YLFASM Trigger: CATGCTGGCAAACAGGTAGCACAGGGCTGTGTGAGC...TGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068487.12 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACAGCGGCGAGTCTGTTGTaGGCTGACTTCTCTGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: PGSRRSHQGCVVRTRACTAASLL*ADFSVL Trigger: CAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGC...TGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR TCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGAGATTTTCTGGAATGCTaGCCCCACAAACAGGACAAG | + |
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Preference number: 4 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGDFLEC*PHKQDK Trigger: CTTGTCCTGTTTGTGGGGTCAGCATTCCAGAAAATC...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR CCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACTTCAAGGCGCATCCTaGTCTTCTCCATGCTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGLQGAS*SSPCFQ Trigger: TTGAAAGCATGGAGAAGACCAGGATGCGCCTTGAAG...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR CCA 90 bp | GGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATCTTCAAGGCGCATCCTaGTCTTCTCCATGCTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: GGLAAGAPTKGVWLGQEHLQGAS*SSPCFQ Trigger: TTGAAAGCATGGAGAAGACCAGGATGCGCCTTGAAG...ATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR CCA 90 bp | GCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGGCGGCGAGTCTGTTGTaGGCTGACTTCTCTGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: AGAPTKGVWLGQEHAHSQAASLL*ADFSVL Trigger: CAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGC...CTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR TCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGAAACAACAACCTTCTTTaGGGTGGAAGACACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGNNNLL*GGRHRR Trigger: TCTCCTGTGTCTTCCACCTCAAAGAAGGTTGTTGTT...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR TCA 90 bp | AGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGAGTCCAGCTGGGGCTaGGGAAAGTGGTTTGTTACT | + |
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Preference number: 4 (lower is better) Translates to: SRRSHQGCVVRTRACTLSESSWG*GKWFVT Trigger: AGTAACAAACCACTTTCCTCAGCCCCAGCTGGACTC...TGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR GCA 90 bp | GCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGGCAGCTGATTTAGGATaGAAAGCATCGCACTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AGAPTKGVWLGQEHAHSQAADLG*KASHWA Trigger: TGCCCAGTGCGATGCTTTGCATCCTAAATCAGCTGC...CTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR TCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGAATGTGCACAAACTCCTaGTGCCTTTTAATAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGMCTNS*CLLISC Trigger: GCAGCTTATTAAAAGGCATCAGGAGTTTGTGCACAT...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR GCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGATCCTGGTCTTCTCCATaGTTTCAATTTCTTGGACGA | + |
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Preference number: 4 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGSWSSP*FQFLGR Trigger: TCGTCCAAGAAATTGAAAGCATGGAGAAGACCAGGA...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR GCA 90 bp | GGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATTTCATTGAGTTTACTTaGTTCAAGGCGCATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGLAAGAPTKGVWLGQEHFIEFT*FKAHPG Trigger: ACCAGGATGCGCCTTGAAGCAAGTAAACTCAATGAA...ATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCCACCAGAAGCTGGAATaGATTCTGGTGCTTTTTACG | + |
|
Preference number: 4 (lower is better) Translates to: GSRRSHQGCVVRTRACTLHQKLE*ILVLFT Trigger: CGTAAAAAGCACCAGAATGCATTCCAGCTTCTGGTG...GAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077088.11 |
||
| CDS-3UTR CCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGAAAGACACAGGAGATATaGGTGGTGACTCTAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGKTQEI*VVTLKQ Trigger: TTGCTTTAGAGTCACCACCCATATCTCCTGTGTCTT...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGCTTCAAGGCGCATCCTaGTCTTCTCCATGCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGAPTKGVWLGQEHAHSQLQGAS*SSPCFQ Trigger: TTGAAAGCATGGAGAAGACCAGGATGCGCCTTGAAG...CTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATTGCTGTTTGTTTCCTTaGACAGATAAGCCATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGLAAGAPTKGVWLGQEHCCLFP*TDKPYC Trigger: ACAGTATGGCTTATCTGTTCAAGGAAACAAACAGCA...ATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACAATGTGCACAAACTCCTaGTGCCTTTTAATAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGSRRSHQGCVVRTRACTMCTNS*CLLISC Trigger: GCAGCTTATTAAAAGGCATCAGGAGTTTGTGCACAT...TGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACATCCTGGTCTTCTCCATaGTTTCAATTTCTTGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: PGSRRSHQGCVVRTRACTSWSSP*FQFLGR Trigger: TCGTCCAAGAAATTGAAAGCATGGAGAAGACCAGGA...TGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACATTCATTGAGTTTACTTaGTTCAAGGCGCATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSRRSHQGCVVRTRACTFIEFT*FKAHPG Trigger: ACCAGGATGCGCCTTGAAGCAAGTAAACTCAATGAA...TGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAGCTTGTGAAACTCTaGCAGTTTTCTTATACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGQLVKL*QFSYTL Trigger: AAGGGTATAAGAAAACTGGCAGAGTTTCACAAGCTG...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 |
||
| CDS-3UTR CCA 90 bp | GGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCACTGCCAGCAGACTATaGTGCTTCTCATCTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRRSHQGCVVRTRACTLTASRL*CFSSCF Trigger: AAAACAAGATGAGAAGCACCATAGTCTGCTGGCAGT...GAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068487.12 |
||
| CDS-3UTR CCA 90 bp | GGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATAGCTGGAATGCATTCTaGTGCTTTTTACCTGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGLAAGAPTKGVWLGQEHSWNAF*CFLPDN Trigger: GTTATCAGGTAAAAAGCACCAGAATGCATTCCAGCT...ATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068487.12 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATCTTTCTTATACAGAGTaGACAATAGTTGTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLAAGAPTKGVWLGQEHLSYTE*TIVVRA Trigger: TGCTCTCACAACTATTGTTCACTCTGTATAAGAAAG...ATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACATGCTGTTTGTTTCCTTaGACAGATAAGCCATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSRRSHQGCVVRTRACTCCLFP*TDKPYC Trigger: ACAGTATGGCTTATCTGTTCAAGGAAACAAACAGCA...TGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGACAAGAGCATGCACACTCTCAGCGGCAGGCTTGCAACTGTCAAGAGGATGAGTCCAGCTGGGGCTaGGGAAAGTGGTTTGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LGQEHAHSQRQACNCQEDESSWG*GKWFVT Trigger: AGTAACAAACCACTTTCCTCAGCCCCAGCTGGACTC...ATCCTCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGAGTCTGTTGTGGGCTaGCTTCTCTGTTTTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRRSHQGCVVRTRACTLSESVVG*LLCFDH Trigger: ATGATCAAAACAGAGAAGTCAGCCCACAACAGACTC...TGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACTGACTTCTCTGTTTTaGTCATTTCTATTGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGLTSLF*SFLLHE Trigger: CTCATGCAATAGAAATGATCAAAACAGAGAAGTCAG...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077088.11 ENSMUST00000113180.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATCTGACTTCTCTGTTTTaGTCATTTCTATTGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGLAAGAPTKGVWLGQEHLTSLF*SFLLHE Trigger: CTCATGCAATAGAAATGATCAAAACAGAGAAGTCAG...ATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077088.11 ENSMUST00000113180.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCCAACAGGTGAGTCCGTaGAAAATTCATGCTTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSRRSHQGCVVRTRACTLQQVSP*KIHAFY Trigger: GTAAAAAGCATGAATTTTGCACGGACTCACCTGTTG...GAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGTCCTGGTCTTCTCCATaGTTTCAATTTCTTGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: AGAPTKGVWLGQEHAHSQSWSSP*FQFLGR Trigger: TCGTCCAAGAAATTGAAAGCATGGAGAAGACCAGGA...CTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGATGGAATGCATTCTGGTaGTTTTTACGATATTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGWNAFW*FLRYSL Trigger: CAGTGAATATCGTAAAAAGCACCAGAATGCATTCCA...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077088.11 |
||
| CDS-3UTR TCA 90 bp | AATATCAGTACAACTAGAAGAATCATCCGGCCTCTCAGGCTCCGACGGGCCTGGGATTTTCTGGAATGCTaGCCCCACAAACAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: NISTTRRIIRPLRLRRAWDFLEC*PHKQDK Trigger: CTTGTCCTGTTTGTGGGGTCAGCATTCCAGAAAATC...CCAGGCCCGTCGGAGCCTGAGAGGCCGGATGATTCTTCTAGTTGTACTGATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTGGGGGATTATCACTaGAATGTTGAAATACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGSRRSHQGCVVRTRACTLGDYH*NVEILK Trigger: TTTGAGTATTTCAACATTGCAGTGATAATCCCCCAG...TGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGCAACAGGTGAGTCCGTaGAAAATTCATGCTTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: AGAPTKGVWLGQEHAHSQQQVSP*KIHAFY Trigger: GTAAAAAGCATGAATTTTGCACGGACTCACCTGTTG...CTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAAAGACACAGGAGATATaGGTGGTGACTCTAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRRSHQGCVVRTRACTLSKTQEI*VVTLKQ Trigger: TTGCTTTAGAGTCACCACCCATATCTCCTGTGTCTT...TGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACAATTCCGCTTGTTTCTTaGTTCAATCTCAACACATTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSRRSHQGCVVRTRACTIPLVS*FNLNTF Trigger: GAATGTGTTGAGATTGAACCAAGAAACAAGCGGAAT...TGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGCTTTCTTATACAGAGTaGACAATAGTTGTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGAPTKGVWLGQEHAHSQLSYTE*TIVVRA Trigger: TGCTCTCACAACTATTGTTCACTCTGTATAAGAAAG...CTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGCTGGGGGATTATCACTaGAATGTTGAAATACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGAPTKGVWLGQEHAHSQLGDYH*NVEILK Trigger: TTTGAGTATTTCAACATTGCAGTGATAATCCCCCAG...CTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGACAAGAGCATGCACACTCTCAGCGGCAGGCTTGCAACTGTCAAGAGGATGTGCTTAGCTCTTTTTaGGGGCTGAATTTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGQEHAHSQRQACNCQEDVLSSF*GLNFLS Trigger: TGAGAGGAAATTCAGCCCTCAAAAAGAGCTAAGCAC...ATCCTCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCAGTCCGTGCAAAATTCATaGTTTTTACCAGTTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: AGAPTKGVWLGQEHAHSQSVQNS*FLPVHL Trigger: TAGATGAACTGGTAAAAAGCATGAATTTTGCACGGA...CTGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | TTAGGACAAGAGCATGCACACTCTCAGCGGCAGGCTTGCAACTGTCAAGAGGATTGCAAAGCATCGCACTaGGCATTATACATGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGQEHAHSQRQACNCQEDCKASH*ALYMCT Trigger: TGTGCACATGTATAATGCCCAGTGCGATGCTTTGCA...ATCCTCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | CCTGACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGAGTCCAGCTGGGGCTaGGGAAAGTGGTTTGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: PDPSGRTLRVITLSATSEESSWG*GKWFVT Trigger: AGTAACAAACCACTTTCCTCAGCCCCAGCTGGACTC...TTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | TTAGGACAAGAGCATGCACACTCTCAGCGGCAGGCTTGCAACTGTCAAGAGGATAAGACACAGGAGATATaGGTGGTGACTCTAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGQEHAHSQRQACNCQEDKTQEI*VVTLKQ Trigger: TTGCTTTAGAGTCACCACCCATATCTCCTGTGTCTT...ATCCTCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | GACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGGAGCGGCGAGTCTGTTGTaGGCTGACTTCTCTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DPSGRTLRVITLSATSEGAASLL*ADFSVL Trigger: CAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGC...TCCTTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | CCTGACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGCGGCGAGTCTGTTGTaGGCTGACTTCTCTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PDPSGRTLRVITLSATSEAASLL*ADFSVL Trigger: CAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGC...TTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGCAGGTTCATCTGCTCTCATCAACGGCAGTGTCTCTGCAGGTTCATCTGTATGTGCACAAACTCCTaGTGCCTTTTAATAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCRFICSHQRQCLCRFICMCTNS*CLLISC Trigger: GCAGCTTATTAAAAGGCATCAGGAGTTTGTGCACAT...ACAGATGAACCTGCAGAGACACTGCCGTTGATGAGAGCAGATGAACCTGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR TCA 90 bp | TTAGGACAAGAGCATGCACACTCTCAGCGGCAGGCTTGCAACTGTCAAGAGGATTGTGGATATTCACTGTaGACTTCCTCAATTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGQEHAHSQRQACNCQEDCGYSL*TSSISF Trigger: GAAGGAAATTGAGGAAGTTCACAGTGAATATCCACA...ATCCTCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTTGTTTGTTTAACAGCTGGGATTCAAAGTGTTAGAGATCTGCCTGACCCCGCAGCTGATTTAGGATaGAAAGCATCGCACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFVCLTAGIQSVRDLPDPAADLG*KASHWA Trigger: TGCCCAGTGCGATGCTTTGCATCCTAAATCAGCTGC...GGGGTCAGGCAGATCTCTAACACTTTGAATCCCAGCTGTTAAACAAACAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | CCTGACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGTGCTTAGCTCTTTTTaGGGGCTGAATTTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PDPSGRTLRVITLSATSEVLSSF*GLNFLS Trigger: TGAGAGGAAATTCAGCCCTCAAAAAGAGCTAAGCAC...TTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTTTGTTTTGTTGTTGTTCAGGAAGGCAAAGAAGGATTTTCTGGAATGCTaGCCCCACAAACAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVFVLLLFRKAKKDFLEC*PHKQDK Trigger: CTTGTCCTGTTTGTGGGGTCAGCATTCCAGAAAATC...CTTCTTTGCCTTCCTGAACAACAACAAAACAAACACACACACACACACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | GCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGCACAAAGCCCATGATTTTCTGGAATGCTaGCCCCACAAACAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: AITISYSGHCTESWHKAHDFLEC*PHKQDK Trigger: CTTGTCCTGTTTGTGGGGTCAGCATTCCAGAAAATC...ATGGGCTTTGTGCCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | CCTGACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGAGTCTGTTGTGGGCTaGCTTCTCTGTTTTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PDPSGRTLRVITLSATSEESVVG*LLCFDH Trigger: ATGATCAAAACAGAGAAGTCAGCCCACAACAGACTC...TTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | AGAATATCAGTACAACTAGAAGAATCATCCGGCCTCTCAGGCTCCGACGGGCCTTCCGTGCAAAATTCATaGTTTTTACCAGTTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RISVQLEESSGLSGSDGPSVQNS*FLPVHL Trigger: TAGATGAACTGGTAAAAAGCATGAATTTTGCACGGA...AGGCCCGTCGGAGCCTGAGAGGCCGGATGATTCTTCTAGTTGTACTGATATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAGAATATCAGTACAACTAGAAGAATCATCCGGCCTCTCAGGCTCCGACGGCAACAGGTGAGTCCGTaGAAAATTCATGCTTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: EKNISTTRRIIRPLRLRRQQVSP*KIHAFY Trigger: GTAAAAAGCATGAATTTTGCACGGACTCACCTGTTG...CCGTCGGAGCCTGAGAGGCCGGATGATTCTTCTAGTTGTACTGATATTCTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR GCA 90 bp | AATAGAGAAGTCAAACCAAGGAAAACGCTCCCGCTAAGAAATGTATACTCTGTGGCAGCTGATTTAGGATaGAAAGCATCGCACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NREVKPRKTLPLRNVYSVAADLG*KASHWA Trigger: TGCCCAGTGCGATGCTTTGCATCCTAAATCAGCTGC...CACAGAGTATACATTTCTTAGCGGGAGCGTTTTCCTTGGTTTGACTTCTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | GACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGGATGCAAAGCATCGCACTaGGCATTATACATGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: DPSGRTLRVITLSATSEGCKASH*ALYMCT Trigger: TGTGCACATGTATAATGCCCAGTGCGATGCTTTGCA...TCCTTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTTTGTTTTGTTGTTGTTCAGGAAGGCAAAGAAGCTTCAAGGCGCATCCTaGTCTTCTCCATGCTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVFVLLLFRKAKKLQGAS*SSPCFQ Trigger: TTGAAAGCATGGAGAAGACCAGGATGCGCCTTGAAG...CTTCTTTGCCTTCCTGAACAACAACAAAACAAACACACACACACACACACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTGTTTGTTTAACAGCTGGGATTCAAAGTGTTAGAGATCTGCCTGACCCCGTGCTTAGCTCTTTTTaGGGGCTGAATTTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFVCLTAGIQSVRDLPDPVLSSF*GLNFLS Trigger: TGAGAGGAAATTCAGCCCTCAAAAAGAGCTAAGCAC...GGGGTCAGGCAGATCTCTAACACTTTGAATCCCAGCTGTTAAACAAACAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGGCCTGATCCACCAGAAGCTGGAATGCATTCTGGTGCTTTTTACGATATTGTGCTTAGCTCTTTTTaGGGGCTGAATTTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FWPDPPEAGMHSGAFYDIVLSSF*GLNFLS Trigger: TGAGAGGAAATTCAGCCCTCAAAAAGAGCTAAGCAC...AATATCGTAAAAAGCACCAGAATGCATTCCAGCTTCTGGTGGATCAGGCCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAGAATATCAGTACAACTAGAAGAATCATCCGGCCTCTCAGGCTCCGACTGCTGTTTGTTTCCTTaGACAGATAAGCCATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKRISVQLEESSGLSGSDCCLFP*TDKPYC Trigger: ACAGTATGGCTTATCTGTTCAAGGAAACAAACAGCA...GTCGGAGCCTGAGAGGCCGGATGATTCTTCTAGTTGTACTGATATTCTTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR GCA 90 bp | GCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGCACAAAGCCCATCCTGTGCTACCTGTTTaGCAGCATGATATTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AITISYSGHCTESWHKAHPVLPV*QHDIHC Trigger: ACAGTGAATATCATGCTGGCAAACAGGTAGCACAGG...ATGGGCTTTGTGCCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068487.12 |
||
| CDS-3UTR CCA 90 bp | GCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGCACAAAGCCCATTGCAAAGCATCGCACTaGGCATTATACATGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: AITISYSGHCTESWHKAHCKASH*ALYMCT Trigger: TGTGCACATGTATAATGCCCAGTGCGATGCTTTGCA...ATGGGCTTTGTGCCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | AATAGAGAAGTCAAACCAAGGAAAACGCTCCCGCTAAGAAATGTATACTCTGTGGTGCTTAGCTCTTTTTaGGGGCTGAATTTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NREVKPRKTLPLRNVYSVVLSSF*GLNFLS Trigger: TGAGAGGAAATTCAGCCCTCAAAAAGAGCTAAGCAC...CACAGAGTATACATTTCTTAGCGGGAGCGTTTTCCTTGGTTTGACTTCTCTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | CCTGACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAACAACAGGTGAGTCCGTaGAAAATTCATGCTTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PDPSGRTLRVITLSATSEQQVSP*KIHAFY Trigger: GTAAAAAGCATGAATTTTGCACGGACTCACCTGTTG...TTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | GCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGCACAAAGCCCATTTCATTGAGTTTACTTaGTTCAAGGCGCATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AITISYSGHCTESWHKAHFIEFT*FKAHPG Trigger: ACCAGGATGCGCCTTGAAGCAAGTAAACTCAATGAA...ATGGGCTTTGTGCCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | AATAGAGAAGTCAAACCAAGGAAAACGCTCCCGCTAAGAAATGTATACTCTGTGTGCAAAGCATCGCACTaGGCATTATACATGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NREVKPRKTLPLRNVYSVCKASH*ALYMCT Trigger: TGTGCACATGTATAATGCCCAGTGCGATGCTTTGCA...CACAGAGTATACATTTCTTAGCGGGAGCGTTTTCCTTGGTTTGACTTCTCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGTACACATGTCTTACCTATTGCATGAGTCTGAGTCCGAGGAGAAAAGAATGCAAAGCATCGCACTaGGCATTATACATGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NLYTCLTYCMSLSPRRKECKASH*ALYMCT Trigger: TGTGCACATGTATAATGCCCAGTGCGATGCTTTGCA...TTCTTTTCTCCTCGGACTCAGACTCATGCAATAGGTAAGACATGTGTACAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR TCA 90 bp | GACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAGGACTTTCTTATACAGAGTaGACAATAGTTGTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPSGRTLRVITLSATSEGLSYTE*TIVVRA Trigger: TGCTCTCACAACTATTGTTCACTCTGTATAAGAAAG...TCCTTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCATACATGGCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGATGTGCACAAACTCCTaGTGCCTTTTAATAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPYMAITISYSGHCTESWMCTNS*CLLISC Trigger: GCAGCTTATTAAAAGGCATCAGGAGTTTGTGCACAT...CCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGCCATGTATGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTGTTTGTTTAACAGCTGGGATTCAAAGTGTTAGAGATCTGCCTGACCCCCCAGAAGATCTCTTATaGTGTCTGAACTGGAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: LFVCLTAGIQSVRDLPDPPEDLL*CLNWNY Trigger: ATAGTTCCAGTTCAGACATCATAAGAGATCTTCTGG...GGGGTCAGGCAGATCTCTAACACTTTGAATCCCAGCTGTTAAACAAACAAACAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTGTTTGTTTAACAGCTGGGATTCAAAGTGTTAGAGATCTGCCTGACCCCTGTGGATATTCACTGTaGACTTCCTCAATTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFVCLTAGIQSVRDLPDPCGYSL*TSSISF Trigger: GAAGGAAATTGAGGAAGTTCACAGTGAATATCCACA...GGGGTCAGGCAGATCTCTAACACTTTGAATCCCAGCTGTTAAACAAACAAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | GCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGCACAAAGCCCATCAACAGGTGAGTCCGTaGAAAATTCATGCTTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: AITISYSGHCTESWHKAHQQVSP*KIHAFY Trigger: GTAAAAAGCATGAATTTTGCACGGACTCACCTGTTG...ATGGGCTTTGTGCCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | AAATATGAAGCCATACATGGCAATAACAATATCATATTCAGGTCACTGTACGGAGCAGCTGATTTAGGATaGAAAGCATCGCACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KYEAIHGNNNIIFRSLYGAADLG*KASHWA Trigger: TGCCCAGTGCGATGCTTTGCATCCTAAATCAGCTGC...TCCGTACAGTGACCTGAATATGATATTGTTATTGCCATGTATGGCTTCATATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | CCTGACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAAGTTATATACAGTTTTaGGCAACGGCTTCCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PDPSGRTLRVITLSATSESYIQF*ATASFC Trigger: ACAAAAGGAAGCCGTTGCCCAAAACTGTATATAACT...TTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | CCTGACCCCAGTGGAAGAACACTAAGAGTGATAACTTTAAGTGCCACTTCAGAAATTCCGCTTGTTTCTTaGTTCAATCTCAACACATTC | + |
|
Preference number: 4 (lower is better) Translates to: PDPSGRTLRVITLSATSEIPLVS*FNLNTF Trigger: GAATGTGTTGAGATTGAACCAAGAAACAAGCGGAAT...TTCTGAAGTGGCACTTAAAGTTATCACTCTTAGTGTTCTTCCACTGGGGTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | CACCAGAAGCTGGAATGCATTCTGGTGCTTTTTACGATATTCACTGTGAACTTCCTTTCTTATACAGAGTaGACAATAGTTGTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HQKLECILVLFTIFTVNFLSYTE*TIVVRA Trigger: TGCTCTCACAACTATTGTTCACTCTGTATAAGAAAG...GAAGTTCACAGTGAATATCGTAAAAAGCACCAGAATGCATTCCAGCTTCTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR TCA 90 bp | AAATATGAAGCCATACATGGCAATAACAATATCATATTCAGGTCACTGTACGGAGATTTTCTGGAATGCTaGCCCCACAAACAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KYEAIHGNNNIIFRSLYGDFLEC*PHKQDK Trigger: CTTGTCCTGTTTGTGGGGTCAGCATTCCAGAAAATC...TCCGTACAGTGACCTGAATATGATATTGTTATTGCCATGTATGGCTTCATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGGAAGGAACCAACTGACTAAGAAGAGTCATTTCAGAACATTTCACGTTATGTGCACAAACTCCTaGTGCCTTTTAATAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKGRNQLTKKSHFRTFHVMCTNS*CLLISC Trigger: GCAGCTTATTAAAAGGCATCAGGAGTTTGTGCACAT...AACGTGAAATGTTCTGAAATGACTCTTCTTAGTCAGTTGGTTCCTTCCTTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCATACATGGCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGCCAGAAGATCTCTTATaGTGTCTGAACTGGAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: KPYMAITISYSGHCTESWPEDLL*CLNWNY Trigger: ATAGTTCCAGTTCAGACATCATAAGAGATCTTCTGG...CCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGCCATGTATGGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTACACATGTCTTACCTATTGCATGAGTCTGAGTCCGAGGAGAAAAGAATAGTAAAAACCATGACCTaGTTTAGGATGCAAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LVHMSYLLHESESEEKRIVKTMT*FRMQSI Trigger: GATGCTTTGCATCCTAAATCAGGTCATGGTTTTTAC...TATTCTTTTCTCCTCGGACTCAGACTCATGCAATAGGTAAGACATGTGTACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR GCA 90 bp | GCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGCACAAAGCCCATCTGGGGGATTATCACTaGAATGTTGAAATACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AITISYSGHCTESWHKAHLGDYH*NVEILK Trigger: TTTGAGTATTTCAACATTGCAGTGATAATCCCCCAG...ATGGGCTTTGTGCCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | AATAGAGAAGTCAAACCAAGGAAAACGCTCCCGCTAAGAAATGTATACTCTGTGTGGAATGCATTCTGGTaGTTTTTACCTGATAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NREVKPRKTLPLRNVYSVWNAFW*FLPDNC Trigger: GCAGTTATCAGGTAAAAAGCACCAGAATGCATTCCA...CACAGAGTATACATTTCTTAGCGGGAGCGTTTTCCTTGGTTTGACTTCTCTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068487.12 |
||
| CDS-3UTR GCA 90 bp | AATAGAGAAGTCAAACCAAGGAAAACGCTCCCGCTAAGAAATGTATACTCTGTGCAGCTTGTGAAACTCTaGCAGTTTTCTTATACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NREVKPRKTLPLRNVYSVQLVKL*QFSYTL Trigger: AAGGGTATAAGAAAACTGGCAGAGTTTCACAAGCTG...CACAGAGTATACATTTCTTAGCGGGAGCGTTTTCCTTGGTTTGACTTCTCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 |
||
| CDS-3UTR CCA 90 bp | ATGTCTTACCTATTGCATGAGTCTGAGTCCGAGGAGAAAAGAATATCAGTACAAAAGACACAGGAGATATaGGTGGTGACTCTAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MSYLLHESESEEKRISVQKTQEI*VVTLKQ Trigger: TTGCTTTAGAGTCACCACCCATATCTCCTGTGTCTT...TTGTACTGATATTCTTTTCTCCTCGGACTCAGACTCATGCAATAGGTAAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTTTGTTTTGTTGTTGTTCAGGAAGGCAAAGAAGCATGAAAATCAACCTTCTTTGAGGTaGAAGACACAGGAGATATGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVFVLLLFRKAKKHENQPSLR*KTQEIW Trigger: CCATATCTCCTGTGTCTTCCACCTCAAAGAAGGTTG...ATTTTCATGCTTCTTTGCCTTCCTGAACAACAACAAAACAAACACACACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTGTTTGTTTAACAGCTGGGATTCAAAGTGTTAGAGATCTGCCTGACCCCAGTTATATACAGTTTTaGGCAACGGCTTCCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFVCLTAGIQSVRDLPDPSYIQF*ATASFC Trigger: ACAAAAGGAAGCCGTTGCCCAAAACTGTATATAACT...GGGGTCAGGCAGATCTCTAACACTTTGAATCCCAGCTGTTAAACAAACAAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTGTTTGTTTAACAGCTGGGATTCAAAGTGTTAGAGATCTGCCTGACCCCATTCCGCTTGTTTCTTaGTTCAATCTCAACACATTC | + |
|
Preference number: 4 (lower is better) Translates to: LFVCLTAGIQSVRDLPDPIPLVS*FNLNTF Trigger: GAATGTGTTGAGATTGAACCAAGAAACAAGCGGAAT...GGGGTCAGGCAGATCTCTAACACTTTGAATCCCAGCTGTTAAACAAACAAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGGAAGGAACCAACTGACTAAGAAGAGTCATTTCAGAACATTTCACGTTTGCTGTTTGTTTCCTTaGACAGATAAGCCATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKGRNQLTKKSHFRTFHVCCLFP*TDKPYC Trigger: ACAGTATGGCTTATCTGTTCAAGGAAACAAACAGCA...AACGTGAAATGTTCTGAAATGACTCTTCTTAGTCAGTTGGTTCCTTCCTTTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR TCA 90 bp | AAATATGAAGCCATACATGGCAATAACAATATCATATTCAGGTCACTGTACGGAGAGTCTGTTGTGGGCTaGCTTCTCTGTTTTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KYEAIHGNNNIIFRSLYGESVVG*LLCFDH Trigger: ATGATCAAAACAGAGAAGTCAGCCCACAACAGACTC...TCCGTACAGTGACCTGAATATGATATTGTTATTGCCATGTATGGCTTCATATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | AATAGAGAAGTCAAACCAAGGAAAACGCTCCCGCTAAGAAATGTATACTCTGTGCTGGGGGATTATCACTaGAATGTTGAAATACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NREVKPRKTLPLRNVYSVLGDYH*NVEILK Trigger: TTTGAGTATTTCAACATTGCAGTGATAATCCCCCAG...CACAGAGTATACATTTCTTAGCGGGAGCGTTTTCCTTGGTTTGACTTCTCTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | TTACTGAGACAGTATCTGAGAAGCTCACATTATCTTCTTGTGCGATACACTCAGCTGGGGGATTATCACTaGAATGTTGAAATACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRQYLRSSHYLLVRYTQLGDYH*NVEILK Trigger: TTTGAGTATTTCAACATTGCAGTGATAATCCCCCAG...CTGAGTGTATCGCACAAGAAGATAATGTGAGCTTCTCAGATACTGTCTCAGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTTTGTTTTGTTGTTGTTCAGGAAGGCAAAGAAGTCCGTGCAAAATTCATaGTTTTTACCAGTTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVFVLLLFRKAKKSVQNS*FLPVHL Trigger: TAGATGAACTGGTAAAAAGCATGAATTTTGCACGGA...CTTCTTTGCCTTCCTGAACAACAACAAAACAAACACACACACACACACACACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | GCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGCACAAAGCCCATTCCGTGCAAAATTCATaGTTTTTACCAGTTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: AITISYSGHCTESWHKAHSVQNS*FLPVHL Trigger: TAGATGAACTGGTAAAAAGCATGAATTTTGCACGGA...ATGGGCTTTGTGCCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTTTGTTTTGTTGTTGTTCAGGAAGGCAAAGAAGCATGAAAATTCCTGGTCTTCTCCATaGTTTCAATTTCTTGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVFVLLLFRKAKKHENSWSSP*FQFLGR Trigger: TCGTCCAAGAAATTGAAAGCATGGAGAAGACCAGGA...ATTTTCATGCTTCTTTGCCTTCCTGAACAACAACAAAACAAACACACACACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR GCA 90 bp | AAATATGAAGCCATACATGGCAATAACAATATCATATTCAGGTCACTGTACGGACACCAGAAGCTGGAATaGATTCTGGTGCTTTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: KYEAIHGNNNIIFRSLYGHQKLE*ILVLFT Trigger: GGTAAAAAGCACCAGAATGCATTCCAGCTTCTGGTG...TCCGTACAGTGACCTGAATATGATATTGTTATTGCCATGTATGGCTTCATATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068487.12 |
||
| CDS-3UTR CCA 90 bp | AATAGAGAAGTCAAACCAAGGAAAACGCTCCCGCTAAGAAATGTATACTCTGTGAGTTATATACAGTTTTaGGCAACGGCTTCCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NREVKPRKTLPLRNVYSVSYIQF*ATASFC Trigger: ACAAAAGGAAGCCGTTGCCCAAAACTGTATATAACT...CACAGAGTATACATTTCTTAGCGGGAGCGTTTTCCTTGGTTTGACTTCTCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTACACATGTCTTACCTATTGCATGAGTCTGAGTCCGAGGAGAAAAGAATAAGTTATATACAGTTTTaGGCAACGGCTTCCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVHMSYLLHESESEEKRISYIQF*ATASFC Trigger: ACAAAAGGAAGCCGTTGCCCAAAACTGTATATAACT...TATTCTTTTCTCCTCGGACTCAGACTCATGCAATAGGTAAGACATGTGTACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCATACATGGCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGAGCTGGAATGCATTCTaGTGCTTTTTACGATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPYMAITISYSGHCTESWSWNAF*CFLRYS Trigger: TGAATATCGTAAAAAGCACCAGAATGCATTCCAGCT...CCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGCCATGTATGGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077088.11 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGGAAGGAACCAACTGACTAAGAAGAGTCATTTCAGAACATTTCACGTTTTACGATATTCACTGTaGACTTCCTCAATTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGRNQLTKKSHFRTFHVLRYSL*TSSISF Trigger: GAAGGAAATTGAGGAAGTTCACAGTGAATATCGTAA...AACGTGAAATGTTCTGAAATGACTCTTCTTAGTCAGTTGGTTCCTTCCTTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077088.11 |
||
| 3UTR CAA 72 bp | AACAAACATAGGAAGCAGGTATTTAAGAGAACCAACTaGTACACATGTCTTACCTATTGCATGAGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKHRKQVFKRTN*YTCLTYCMSLS Trigger: ACTCAGACTCATGCAATAGGTAAGACATGTGTACAAGTTGGTTCTCTTAAATACCTGCTTCCTATGTTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTATTCAAATACTCACAAGCCACTGTTTCAAAGACATTACACATTGCATATTGCTGTTTGTTTCCTTaGACAGATAAGCCATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALFKYSQATVSKTLHIAYCCLFP*TDKPYC Trigger: ACAGTATGGCTTATCTGTTCAAGGAAACAAACAGCA...ATATGCAATGTGTAATGTCTTTGAAACAGTGGCTTGTGAGTATTTGAATAGAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077088.11 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTTTGTTTTGTTGTTGTTCAGGAAGGCAAAGAAGCATGAAAATATTCCGCTTGTTTCTTaGTTCAATCTCAACACATTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVFVLLLFRKAKKHENIPLVS*FNLNTF Trigger: GAATGTGTTGAGATTGAACCAAGAAACAAGCGGAAT...ATTTTCATGCTTCTTTGCCTTCCTGAACAACAACAAAACAAACACACACACACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR CAA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACTGCCACGCAACAAGTaGGGCACTGAGTTTTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGLPRNK*GTEFYR Trigger: CCTATAAAACTCAGTGCCCAACTTGTTGCGTGGCAG...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CAA 90 bp | AGTAACTGCGGTGGCCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGAGCTGAGGAAAGTGGTTaGTTACTGAGACAGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SNCGGLAAGAPTKGVWLGAEESG*LLRQYL Trigger: CAGATACTGTCTCAGTAACAAACCACTTTCCTCAGC...TCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGGCCACCGCAGTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCACTGCCACGCAACAAGTaGGGCACTGAGTTTTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRSHQGCVVRTRACTLSLPRNK*GTEFYR Trigger: CCTATAAAACTCAGTGCCCAACTTGTTGCGTGGCAG...TGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACAGCTGACTTCTCTGTTTaGATCATTTTTGTGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSRRSHQGCVVRTRACTADFSV*IIFVSR Trigger: GCGGCTCACAAAAATGATCAAAACAGAGAAGTCAGC...TGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTATTCCGCTTGTTTCTaGGTTCAATCTCAACACATT | + |
|
Preference number: 5 (lower is better) Translates to: GSRRSHQGCVVRTRACTLYSACF*VQSQHI Trigger: AATGTGTTGAGATTGAACCAAGAAACAAGCGGAATA...GAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS GCA 90 bp | AACCTGTTCGCCTGTTTGACAGGGTGTTGGGCGGCGTCAGCATTATaGACTTTAACAACAACCTTCTTTGAGGTGGAAGACACAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NLFACLTGCWAASAL*TLTTTFFEVEDTGD Trigger: ATCTCCTGTGTCTTCCACCTCAAAGAAGGTTGTTGTTAAAGTGCATAATGCTGACGCCGCCCAACACCCTGTCAAACAGGCGAACAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGGCGCTCCCACCAAGGGTGTGTGGTTAGGACAAGAGCATGCACACTCTCATATTCCGCTTGTTTCTaGGTTCAATCTCAACACATT | + |
|
Preference number: 5 (lower is better) Translates to: SRRSHQGCVVRTRACTLSYSACF*VQSQHI Trigger: AATGTGTTGAGATTGAACCAAGAAACAAGCGGAATA...TGAGAGTGTGCATGCTCTTGTCCTAACCACACACCCTTGGTGGGAGCGCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS CCA 90 bp | TTCAATCTCAACACATTCACTGGCTCTAGTGCGGCGAGTCTGTTGTaGGCTGACTTCTCTGTTTTGATCATTTTTGTGAGCCGCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FNLNTFTGSSAASLL*ADFSVLIIFVSRFP Trigger: TGGGAAGCGGCTCACAAAAATGATCAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGCACTAGAGCCAGTGAATGTGTTGAGATTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
||
| CDS GCA 90 bp | GCAGACTATGGTGCTTCTCATCTTGTTTTCGCTCACACAGCCCTGTaGTACCTGTTTGCCAGCATGATATTCACTGTGAACTTCCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ADYGASHLVFAHTAL*YLFASMIFTVNFLN Trigger: ATTGAGGAAGTTCACAGTGAATATCATGCTGGCAAACAGGTAGCACAGGGCTGTGTGAGCGAAAACAAGATGAGAAGCACCATAGTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000142079.2 |
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| CDS GCA 90 bp | TGCTTCTCATCTTGTTTTCGCTCACACAGCCCTGTGCTACCTGTTTaGCAGCATGATATTCACTGTGAACTTCCTCAATTTCCTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CFSSCFRSHSPVLPV*QHDIHCELPQFPSL Trigger: CAGAGAAGGAAATTGAGGAAGTTCACAGTGAATATCATGCTGGCAAACAGGTAGCACAGGGCTGTGTGAGCGAAAACAAGATGAGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000142079.2 |
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| CDS CCA 90 bp | ATCAGGAACTTATCCATTAACCTGTTCGCCTGTTTGACAGGGTGTTaGGCGGCGTCAGCATTATGCACTTTAACAACAACCTTCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IRNLSINLFACLTGC*AASALCTLTTTFFE Trigger: CTCAAAGAAGGTTGTTGTTAAAGTGCATAATGCTGACGCCGCCCAACACCCTGTCAAACAGGCGAACAGGTTAATGGATAAGTTCCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
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| CDS-3UTR CAA 90 bp | TTAGGACAAGAGCATGCACACTCTCAGCGGCAGGCTTGCAACTGTCAAGAGGATTATTCCGCTTGTTTCTaGGTTCAATCTCAACACATT | + |
|
Preference number: 5 (lower is better) Translates to: LGQEHAHSQRQACNCQEDYSACF*VQSQHI Trigger: AATGTGTTGAGATTGAACCAAGAAACAAGCGGAATA...ATCCTCTTGACAGTTGCAAGCCTGCCGCTGAGAGTGTGCATGCTCTTGTCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR CAA 90 bp | AATAGAGAAGTCAAACCAAGGAAAACGCTCCCGCTAAGAAATGTATACTCTGTGCTGCCACGCAACAAGTaGGGCACTGAGTTTTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: NREVKPRKTLPLRNVYSVLPRNK*GTEFYR Trigger: CCTATAAAACTCAGTGCCCAACTTGTTGCGTGGCAG...CACAGAGTATACATTTCTTAGCGGGAGCGTTTTCCTTGGTTTGACTTCTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS TCA 90 bp | GTGAACAATAGTTGTGAGAGCACTGGGGGATTATCACTGCAATGTTaGAATACTCAAAGCAAATCCCACAGCGCAGCAAGTCATCTATTG | + |
|
Preference number: 5 (lower is better) Translates to: VNNSCESTGGLSLQC*NTQSKSHSAASHLL Trigger: CAATAGATGACTTGCTGCGCTGTGGGATTTGCTTTGAGTATTTCAACATTGCAGTGATAATCCCCCAGTGCTCTCACAACTATTGTTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
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| CDS-3UTR CAA 90 bp | GCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGCACAAAGCCCATGCTGAGGAAAGTGGTTaGTTACTGAGACAGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: AITISYSGHCTESWHKAHAEESG*LLRQYL Trigger: CAGATACTGTCTCAGTAACAAACCACTTTCCTCAGC...ATGGGCTTTGTGCCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR CAA 90 bp | AAGCCATACATGGCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGGCTGAGGAAAGTGGTTaGTTACTGAGACAGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPYMAITISYSGHCTESWAEESG*LLRQYL Trigger: CAGATACTGTCTCAGTAACAAACCACTTTCCTCAGC...CCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGCCATGTATGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR CAA 90 bp | AAGCCATACATGGCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGGCTGACTTCTCTGTTTaGATCATTTTTGTGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KPYMAITISYSGHCTESWADFSV*IIFVSR Trigger: GCGGCTCACAAAAATGATCAAAACAGAGAAGTCAGC...CCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGCCATGTATGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
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| CDS-3UTR CAA 90 bp | AACATAGGAAGCAGGTATTTAAGAGAACCAACTTGTACACATGTCTTACCTATTCTGCCACGCAACAAGTaGGGCACTGAGTTTTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: NIGSRYLREPTCTHVLPILPRNK*GTEFYR Trigger: CCTATAAAACTCAGTGCCCAACTTGTTGCGTGGCAG...AATAGGTAAGACATGTGTACAAGTTGGTTCTCTTAAATACCTGCTTCCTATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156063.2 |
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| CDS-3UTR CAA 90 bp | GCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGCACAAAGCCCATAAGTTATATACAGTTTaGGGCAACGGCTTCCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AITISYSGHCTESWHKAHKLYTV*GNGFLL Trigger: CAAAAGGAAGCCGTTGCCCAAAACTGTATATAACTT...ATGGGCTTTGTGCCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTTTGTTTTGTTGTTGTTCAGGAAGGCAAAGAAGCATGAAAATGCTGAGGAAAGTGGTTaGTTACTGAGACAGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVFVLLLFRKAKKHENAEESG*LLRQYL Trigger: CAGATACTGTCTCAGTAACAAACCACTTTCCTCAGC...ATTTTCATGCTTCTTTGCCTTCCTGAACAACAACAAAACAAACACACACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS TCA 90 bp | ACCAGAAGCTGGAATGCATTCTGGTGCTTTTTACGATATTCACTGTaGACTTCCTCAATTTCCTTCTCTGTTTGGTTCTTTGTAAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: TRSWNAFWCFLRYSL*TSSISFSVWFFVKT Trigger: GGTTTTTACAAAGAACCAAACAGAGAAGGAAATTGAGGAAGTTCACAGTGAATATCGTAAAAAGCACCAGAATGCATTCCAGCTTCTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077088.11 |
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| CDS-3UTR CAA 90 bp | AAGCCATACATGGCAATAACAATATCATATTCAGGTCACTGTACGGAAAGCTGGTATTCCGCTTGTTTCTaGGTTCAATCTCAACACATT | + |
|
Preference number: 5 (lower is better) Translates to: KPYMAITISYSGHCTESWYSACF*VQSQHI Trigger: AATGTGTTGAGATTGAACCAAGAAACAAGCGGAATA...CCAGCTTTCCGTACAGTGACCTGAATATGATATTGTTATTGCCATGTATGGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS TCA 90 bp | ACAGTATCTGAGAAGCTCACATTATCTTCTTGTGGATATTCACTGTaGACTTCCTCAATTTCCTTCTCTGTTTGGTTCTTTGTAAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: TVSEKLTLSSCGYSL*TSSISFSVWFFVKT Trigger: GGTTTTTACAAAGAACCAAACAGAGAAGGAAATTGAGGAAGTTCACAGTGAATATCCACAAGAAGATAATGTGAGCTTCTCAGATACTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113180.8 ENSMUST00000113182.8 |
||
| CDS CAA 90 bp | ACTGGCTCTAGTGCGGCGAGTCTGTTGTGGGCTGACTTCTCTGTTTaGATCATTTTTGTGAGCCGCTTCCCAGGCTTCCTCTTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGSSAASLLWADFSV*IIFVSRFPGFLFFQ Trigger: CTGGAAGAAGAGGAAGCCTGGGAAGCGGCTCACAAAAATGATCAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGCACTAGAGCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
||
| CDS TCA 72 bp | GTGCGGCGAGTCTGTTGTGGGCTGACTTCTCTGTTTTaGTCATTTCTATTGCATGAGTCTGAGTCCGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VRRVCCGLTSLF*SFLLHESESEE Trigger: CTCCTCGGACTCAGACTCATGCAATAGAAATGATCAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000142079.2 |
||
| CDS CAA 72 bp | CCTGATAACTGCCAGCAGACTATGGTGCTTCTCATCTaGTTTTCGCTCACACAGCCCTGTGCTACCTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PDNCQQTMVLLI*FSLTQPCATCL Trigger: CAAACAGGTAGCACAGGGCTGTGTGAGCGAAAACAAGATGAGAAGCACCATAGTCTGCTGGCAGTTATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000142079.2 |
||
| CDS GCA 72 bp | GGTGCTTCTCATCTTGTTTTCGCTCACACAGCCCTGTaGTACCTGTTTGCCAGCATGATATTCACTGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GASHLVFAHTAL*YLFASMIFTVN Trigger: GTTCACAGTGAATATCATGCTGGCAAACAGGTAGCACAGGGCTGTGTGAGCGAAAACAAGATGAGAAGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000142079.2 |
||
| CDS CAA 72 bp | CTAATCAGGAACTTATCCATTAACCTGTTCGCCTGTTaGACAGGGTGTTGGGCGGCGTCAGCATTATGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LIRNLSINLFAC*TGCWAASALCT Trigger: AGTGCATAATGCTGACGCCGCCCAACACCCTGTCAAACAGGCGAACAGGTTAATGGATAAGTTCCTGATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
||
| CDS CAA 90 bp | TGGTTCAATCTCAACACATTCACTGGCTCTAGTGCGGCGAGTCTGTaGTGGGCTGACTTCTCTGTTTTGATCATTTTTGTGAGCCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WFNLNTFTGSSAASL*WADFSVLIIFVSRF Trigger: GAAGCGGCTCACAAAAATGATCAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGCACTAGAGCCAGTGAATGTGTTGAGATTGAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
||
| CDS CCA 72 bp | TTATCCATTAACCTGTTCGCCTGTTTGACAGGGTGTTaGGCGGCGTCAGCATTATGCACTTTAACAACAACC | + |
|
Preference number: 6 (lower is better) Translates to: LSINLFACLTGC*AASALCTLTTT Trigger: GGTTGTTGTTAAAGTGCATAATGCTGACGCCGCCCAACACCCTGTCAAACAGGCGAACAGGTTAATGGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
||
| CDS CCA 72 bp | TCTGGTGCTTTTTACCTGATAACTGCCAGCAGACTATaGTGCTTCTCATCTTGTTTTCGCTCACACAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SGAFYLITASRL*CFSSCFRSHSP Trigger: AGGGCTGTGTGAGCGAAAACAAGATGAGAAGCACCATAGTCTGCTGGCAGTTATCAGGTAAAAAGCACCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000142079.2 |
||
| CDS CCA 72 bp | AACACATTCACTGGCTCTAGTGCGGCGAGTCTGTTGTaGGCTGACTTCTCTGTTTTGATCATTTTTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NTFTGSSAASLL*ADFSVLIIFVS Trigger: GCTCACAAAAATGATCAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGCACTAGAGCCAGTGAATGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
||
| CDS CAA 72 bp | CTCAACACATTCACTGGCTCTAGTGCGGCGAGTCTGTaGTGGGCTGACTTCTCTGTTTTGATCATTTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LNTFTGSSAASL*WADFSVLIIFV Trigger: CACAAAAATGATCAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGCACTAGAGCCAGTGAATGTGTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
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| CDS CAA 90 bp | CCAGTTTCTCTAATCAGGAACTTATCCATTAACCTGTTCGCCTGTTaGACAGGGTGTTGGGCGGCGTCAGCATTATGCACTTTAACAACA | + |
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Preference number: 6 (lower is better) Translates to: PVSLIRNLSINLFAC*TGCWAASALCTLTT Trigger: TGTTGTTAAAGTGCATAATGCTGACGCCGCCCAACACCCTGTCAAACAGGCGAACAGGTTAATGGATAAGTTCCTGATTAGAGAAACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
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| CDS CCA 72 bp | AACACATTCACTGGCTCTAGTGCGGCGAGTCTGTTGTaGGCTGACTTCTCTGTTTTGATCATTTCTATTGCA | + |
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Preference number: 6 (lower is better) Translates to: NTFTGSSAASLL*ADFSVLIISIA Trigger: TGCAATAGAAATGATCAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGCACTAGAGCCAGTGAATGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000142079.2 |
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| CDS CAA 72 bp | CTCAACACATTCACTGGCTCTAGTGCGGCGAGTCTGTaGTGGGCTGACTTCTCTGTTTTGATCATTTCTATT | + |
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Preference number: 6 (lower is better) Translates to: LNTFTGSSAASL*WADFSVLIISI Trigger: AATAGAAATGATCAAAACAGAGAAGTCAGCCCACAACAGACTCGCCGCACTAGAGCCAGTGAATGTGTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000142079.2 |
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| CDS TCA 72 bp | AAGTTATATACAGTTTTGGGCAACGGCTTCCTTTTGTaGGCAGAACTTCGCAGGCTCTCCTTCTTCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: KLYTVLGNGFLL*AELRRLSFFSS Trigger: TGAAGAGAAGAAGGAGAGCCTGCGAAGTTCTGCTCACAAAAGGAAGCCGTTGCCCAAAACTGTATATAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
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| CDS GCA 72 bp | TCTTGTTTTCGCTCACACAGCCCTGTGCTACCTGTTTaGCAGCATGATATTCACTGTGAACTTCCTCAATTT | + |
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Preference number: 6 (lower is better) Translates to: SCFRSHSPVLPV*QHDIHCELPQF Trigger: AAATTGAGGAAGTTCACAGTGAATATCATGCTGGCAAACAGGTAGCACAGGGCTGTGTGAGCGAAAACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000142079.2 |
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| CDS CAA 90 bp | GGCGATTATTTCTCAGGTCTGGCTCCGTTACTGCCACGCAACAAGTaGGGCACTGAGTTTTATAGGATAAAAACTTTCTTATACAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: GDYFSGLAPLLPRNK*GTEFYRIKTFLYRV Trigger: CACTCTGTATAAGAAAGTTTTTATCCTATAAAACTCAGTGCCCAACTTGTTGCGTGGCAGTAACGGAGCCAGACCTGAGAAATAATCGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
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| CDS TCA 72 bp | CTCCATGCTTTCAATTTCTTGGACGATTTCAGCAGCTaGTTTAGGATGCAAAGCATCGCACTGGGCATTATA | + |
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Preference number: 6 (lower is better) Translates to: LHAFNFLDDFSS*FRMQSIALGII Trigger: TATAATGCCCAGTGCGATGCTTTGCATCCTAAATCAGCTGCTGAAATCGTCCAAGAAATTGAAAGCATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS GCA 72 bp | TCAATTTCTTGGACGATTTCAGCAGCTGATTTAGGATaGAAAGCATCGCACTGGGCATTATACATGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: SISWTISAADLG*KASHWALYMCT Trigger: TGTGCACATGTATAATGCCCAGTGCGATGCTTTGCATCCTAAATCAGCTGCTGAAATCGTCCAAGAAATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 |
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| CDS CAA 72 bp | TTCTCAGGTCTGGCTCCGTTACTGCCACGCAACAAGTaGGGCACTGAGTTTTATAGGATAAAAACTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: FSGLAPLLPRNK*GTEFYRIKTFL Trigger: TAAGAAAGTTTTTATCCTATAAAACTCAGTGCCCAACTTGTTGCGTGGCAGTAACGGAGCCAGACCTGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
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| CDS CCA 72 bp | TTAAATCACGATCAGAGAGCAAGTTATATACAGTTTTaGGCAACGGCTTCCTTTTGTGAGCAGAACTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: LNHDQRASYIQF*ATASFCEQNFA Trigger: TGCGAAGTTCTGCTCACAAAAGGAAGCCGTTGCCCAAAACTGTATATAACTTGCTCTCTGATCGTGATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
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| CDS CAA 90 bp | TCCTCTTCTTCCAGAAGATCTCTTATGATGTCTGAACTGGAACTATaGCATGAGTCTGAGTCCGAGGAGAAAAGAATATCAGTACAACTA | + |
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Preference number: 6 (lower is better) Translates to: SSSSRRSLMMSELEL*HESESEEKRISVQL Trigger: TAGTTGTACTGATATTCTTTTCTCCTCGGACTCAGACTCATGCAATAGTTCCAGTTCAGACATCATAAGAGATCTTCTGGAAGAAGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
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| CDS GCA 72 bp | AAGCAAACTGCAACAGGTGAGTCCGTGCAAAATTCATaGTTTTTACCAGTTCATCTAAGAGGCGATTATTTC | + |
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Preference number: 6 (lower is better) Translates to: KQTATGESVQNS*FLPVHLRGDYF Trigger: GAAATAATCGCCTCTTAGATGAACTGGTAAAAAGCATGAATTTTGCACGGACTCACCTGTTGCAGTTTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068487.12 ENSMUST00000077088.11 ENSMUST00000113180.8 ENSMUST00000113182.8 ENSMUST00000156063.2 |
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| CDS CAA 72 bp | TCCAGAAGATCTCTTATGATGTCTGAACTGGAACTATaGCATGAGTCTGAGTCCGAGGAGAAAAGAATATCA | + |
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Preference number: 6 (lower is better) Translates to: SRRSLMMSELEL*HESESEEKRIS Trigger: TGATATTCTTTTCTCCTCGGACTCAGACTCATGCAATAGTTCCAGTTCAGACATCATAAGAGATCTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068487.12 ENSMUST00000113182.8 |
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| CDS TCA 72 bp | TGGAATGCATTCTGGTGCTTTTTACGATATTCACTGTaGACTTCCTCAATTTCCTTCTCTGTTTGGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: WNAFWCFLRYSL*TSSISFSVWFF Trigger: AAAGAACCAAACAGAGAAGGAAATTGAGGAAGTTCACAGTGAATATCGTAAAAAGCACCAGAATGCATTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077088.11 |
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| CDS TCA 72 bp | GAGAAGCTCACATTATCTTCTTGTGGATATTCACTGTaGACTTCCTCAATTTCCTTCTCTGTTTGGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: EKLTLSSCGYSL*TSSISFSVWFF Trigger: AAAGAACCAAACAGAGAAGGAAATTGAGGAAGTTCACAGTGAATATCCACAAGAAGATAATGTGAGCTTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113180.8 ENSMUST00000113182.8 |
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