Pregenerated sensors for RACGAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023015Ensembl transcript IDs: ENSMUST00000023756.12, ENSMUST00000164983.8, ENSMUST00000165730.8, ENSMUST00000168065.8, ENSMUST00000169810.8, ENSMUST00000171702.8, ENSMUST00000171908.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGTGGCCACTGGATGCTTGGCCTCGGTTGAGGAAAGCGAGAGCTaGTTTTTGTTCCTCGCTCAGCTGAATACTGCCAGATGTGTCACA | + |
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Preference number: 1 (lower is better) Translates to: GVATGCLASVEESES*FLFLAQLNTARCVT Trigger: TGTGACACATCTGGCAGTATTCAGCTGAGCGAGGAACAAAAATCAGCTCTCGCTTTCCTCAACCGAGGCCAAGCATCCAGTGGCCACGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164983.8 ENSMUST00000165730.8 |
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| 3UTR GCA 90 bp | CCGACAACTAGTAAAGGTGCTAAGTGTCCAGGTGGGAGGGAGCTATaGAACACTCAAACTCTCATACGCGTTCAACTTTATTTAAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: PTTSKGAKCPGGREL*NTQTLIRVQLYLKS Trigger: AGACTTTAAATAAAGTTGAACGCGTATGAGAGTTTGAGTGTTGCATAGCTCCCTCCCACCTGGACACTTAGCACCTTTACTAGTTGTCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR TCA 90 bp | AGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTATATaGAAATTGTCTTCTGAACTGCTAGCTGACTTTTTAAATGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: RKTSPKTEAANFLAI*KLSSELLADFLNGL Trigger: GAGCCCATTTAAAAAGTCAGCTAGCAGTTCAGAAGACAATTTTCATATAGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR-3UTR TCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCCCCGGCCCATCCCGCTaGGGGCTCCAAGCTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: RSEPVALSQLNPDRSEASPGPSR*GLQASC Trigger: ACAAGAAGCTTGGAGCCCTCAGCGGGATGGGCCGGG...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGCCCGGCCCATCCCGCTaGGGGCTCCAAGCTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: GIRTNSASDQPDFDCKIQPGPSR*GLQASC Trigger: ACAAGAAGCTTGGAGCCCTCAGCGGGATGGGCCGGG...CTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR CAA 90 bp | GGGGGTCAGGCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTaGACTGCAAAATCCAGGCAGAGGCTGGCTAGAAACAGCACGCTG | + |
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Preference number: 2 (lower is better) Translates to: GGQASERIRLQINLT*TAKSRQRLARNSTL Trigger: CAGCGTGCTGTTTCTAGCCAGCCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGCCTGACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR-3UTR TCA 90 bp | GAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCAGAGGCATTACACAGGAGGCTaGAGAGCAGACAGGGGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: ERIRLQINLTLTAKSRQRHYTGG*RADRGV Trigger: GACACCCCTGTCTGCTCTTCAGCCTCCTGTGTAATG...CCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCACGCTGTGTGAGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACGGTGGGAGGGAGCTATaGAACACTCAAACTCTCATA | + |
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Preference number: 2 (lower is better) Translates to: TARCVRSEPVALSQLNPDGGREL*NTQTLI Trigger: TATGAGAGTTTGAGTGTTGCATAGCTCCCTCCCACC...GTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCTCACACAGCGTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCATTACACAGGAGGCTaGAGAGCAGACAGGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ASERIRLQINLTLTAKSRHYTGG*RADRGV Trigger: GACACCCCTGTCTGCTCTTCAGCCTCCTGTGTAATG...CCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR CAA 90 bp | GTTTTCTTCACAGGCCCAGGAGGGCCGTCGATGAACTGTCTACTGTaGGAGCGCCTCTTCTCTCGTTTCTTCATTTTGAAATTCTTCACC | + |
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Preference number: 2 (lower is better) Translates to: VFFTGPGGPSMNCLL*ERLFSRFFILKFFT Trigger: GGTGAAGAATTTCAAAATGAAGAAACGAGAGAAGAGGCGCTCCAACAGTAGACAGTTCATCGACGGCCCTCCTGGGCCTGTGAAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
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| 3UTR-3UTR TCA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTAAGAGGCCTGTGTTCTaGGAAGGGGCCGCTGCGCAG | + |
|
Preference number: 2 (lower is better) Translates to: DLFHRKTSPKTEAANFLAKRPVF*EGAAAQ Trigger: CTGCGCAGCGGCCCCTTCTCAGAACACAGGCCTCTT...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR-3UTR GCA 90 bp | GAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCAGAGGGGTGGGAGGGAGCTATaGAACACTCAAACTCTCATA | + |
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Preference number: 2 (lower is better) Translates to: ERIRLQINLTLTAKSRQRGGREL*NTQTLI Trigger: TATGAGAGTTTGAGTGTTGCATAGCTCCCTCCCACC...CCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR-3UTR GCA 90 bp | CCACACGGAACACAAGATTCAGGCTTAATAACCGTCTTTGAGACGAAGTCGTGCCAGTATTCTGAGGTGTaGCCAAATTGTCTGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: PHGTQDSGLITVFETKSCQYSEV*PNCLCQ Trigger: CTGACACAGACAATTTGGGCACACCTCAGAATACTG...GCACGACTTCGTCTCAAAGACGGTTATTAAGCCTGAATCTTGTGTTCCGTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
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| 3UTR GCA 72 bp | AATCAGCTGAATCTGTTGTTCCAGCTTTGCACACTCTaGCTCAGCGCGCTGCCTCCGCTTGATCTCCACGTC | + |
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Preference number: 3 (lower is better) Translates to: NQLNLLFQLCTL*LSALPPLDLHV Trigger: GACGTGGAGATCAAGCGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAGCTGGAACAACAGATTCAGCTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164983.8 ENSMUST00000165730.8 |
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| 3UTR TCA 72 bp | GAGACGAAGTCGTGCAAGCGCATGCCTCCAGTATTCTaGGGTGTGCCCAAATTGTCTGTGTCAGTTCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: ETKSCKRMPPVF*GVPKLSVSVLG Trigger: GCCAAGAACTGACACAGACAATTTGGGCACACCTCAGAATACTGGAGGCATGCGCTTGCACGACTTCGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
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| 3UTR TCA 72 bp | ACACGGAACACAAGATTCAGGCTTAATAACCGTCTTTaGGACGAAGTCGTGCAAGCGCATGCCTCCAGTATT | + |
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Preference number: 3 (lower is better) Translates to: TRNTRFRLNNRL*DEVVQAHASSI Trigger: AATACTGGAGGCATGCGCTTGCACGACTTCGTCTCAAAGACGGTTATTAAGCCTGAATCTTGTGTTCCGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
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| 3UTR TCA 72 bp | CCAGATGTGTCACACATGAGTATGTCTCGAATCAGCTaGATCTGTTGTTCCAGCTTTGCACACTCTGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PDVSHMSMSRIS*ICCSSFAHSAS Trigger: TGAGGCAGAGTGTGCAAAGCTGGAACAACAGATTCAGCTGATTCGAGACATACTCATGTGTGACACATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164983.8 ENSMUST00000165730.8 |
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| 3UTR GCA 72 bp | AGTAAAGGTGCTAAGTGTCCAGGTGGGAGGGAGCTATaGAACACTCAAACTCTCATACGCGTTCAACTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SKGAKCPGGREL*NTQTLIRVQLY Trigger: ATAAAGTTGAACGCGTATGAGAGTTTGAGTGTTGCATAGCTCCCTCCCACCTGGACACTTAGCACCTTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| 3UTR TCA 72 bp | TCACCAAAGACAGAAGCAGCTAACTTTCTTGCTATATaGAAATTGTCTTCTGAACTGCTAGCTGACTTTTTA | + |
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Preference number: 3 (lower is better) Translates to: SPKTEAANFLAI*KLSSELLADFL Trigger: TAAAAAGTCAGCTAGCAGTTCAGAAGACAATTTTCATATAGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR GCA 90 bp | TGTTCACAGGTTGTAAAGGTCCTGACTTCCCGCGACTCCTGGTCCAGGACGGCACAGCTTTGCACACTCTaGCTCAGCGCGCTGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: CSQVVKVLTSRDSWSRTAQLCTL*LSALPP Trigger: CGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAGCTG...TGCCGTCCTGGACCAGGAGTCGCGGGAAGTCAGGACCTTTACAACCTGTGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
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| CDS-3UTR GCA 90 bp | GAGGCTGAAGAGCAGACAGGGGTGTCTCGTGCAGTAAACACAGGCAGACACAGCATCATGGGAGAAGCCTaGGACACGAAGTCGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EAEEQTGVSRAVNTGRHSIMGEA*DTKSAS Trigger: GCTGGCCGACTTCGTGTCGCAGGCTTCTCCCATGAT...GCTGTGTCTGCCTGTGTTTACTGCACGAGACACCCCTGTCTGCTCTTCAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR GCA 90 bp | TGTTCACAGGTTGTAAAGGTCCTGACTTCCCGCGACTCCTGGTCCAGGACGGCACTGTTGTTCCAGCTTTaGACACTCTGCCTCAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: CSQVVKVLTSRDSWSRTALLFQL*TLCLSA Trigger: CGCGCTGAGGCAGAGTGTGCAAAGCTGGAACAACAG...TGCCGTCCTGGACCAGGAGTCGCGGGAAGTCAGGACCTTTACAACCTGTGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
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| CDS-3UTR TCA 90 bp | ACAGCACGCTGTGTGAGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACTGTGCGGTCACAGCCTaGGATCCTGTACAAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TARCVRSEPVALSQLNPDCAVTA*DPVQAC Trigger: GCAGGCTTGTACAGGATCTCAGGCTGTGACCGCACA...GTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCTCACACAGCGTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR GCA 90 bp | CTCCAAGCTTCTTGTCAGTCCCCGAAGGAGGAAGAGGCCTGTGTTCTGAGAAGGCTGTTGTTCCAGCTTTaGACACTCTGCCTCAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LQASCQSPKEEEACVLRRLLFQL*TLCLSA Trigger: CGCGCTGAGGCAGAGTGTGCAAAGCTGGAACAACAG...CCTTCTCAGAACACAGGCCTCTTCCTCCTTCGGGGACTGACAAGAAGCTTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR GCA 90 bp | ACAGCACGCTGTGTGAGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACATCATGGGAGAAGCCTaGGACACGAAGTCGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TARCVRSEPVALSQLNPDIMGEA*DTKSAS Trigger: GCTGGCCGACTTCGTGTCGCAGGCTTCTCCCATGAT...GTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCTCACACAGCGTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR TCA 90 bp | CTTTGCACACTCTGCCTCAGCGCGCTGCCTCCGCTTGATCTCCACGTCCACTTGTCCTGGTTGGTTCTTTaGTACTTCTTTCGGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LCTLCLSALPPLDLHVHLSWLVL*YFFRKS Trigger: GGACTTCCGAAAGAAGTATCAAAGAACCAACCAGGA...CAAGTGGACGTGGAGATCAAGCGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164983.8 ENSMUST00000165730.8 |
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| CDS-3UTR TCA 90 bp | GAGGCTGAAGAGCAGACAGGGGTGTCTCGTGCAGTAAACACAGGCAGACACAGCTGTTCCTCGCTCAGCTaGATACTGCCAGATGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: EAEEQTGVSRAVNTGRHSCSSLS*ILPDVS Trigger: TGACACATCTGGCAGTATTCAGCTGAGCGAGGAACA...GCTGTGTCTGCCTGTGTTTACTGCACGAGACACCCCTGTCTGCTCTTCAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR GCA 90 bp | GAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCAGAGGCAGCTTTGCACACTCTaGCTCAGCGCGCTGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: ERIRLQINLTLTAKSRQRQLCTL*LSALPP Trigger: CGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAGCTG...CCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR TCA 90 bp | CTTTGCACACTCTGCCTCAGCGCGCTGCCTCCGCTTGATCTCCACGTCCACTTGTCAACAATAGGTCTTTaGATTTCTCCAGCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LCTLCLSALPPLDLHVHLSTIGL*ISPAPG Trigger: ACCAGGAGCTGGAGAAATTCAAAGACCTATTGTTGA...CAAGTGGACGTGGAGATCAAGCGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164983.8 ENSMUST00000165730.8 |
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| CDS-3UTR TCA 90 bp | ACAGCACGCTGTGTGAGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACATCTCCACGTCCACTTaGTTACGGGCATGCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TARCVRSEPVALSQLNPDISTST*LRACFS Trigger: GCTGAAGCATGCCCGTAATCAAGTGGACGTGGAGAT...GTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCTCACACAGCGTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR TCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTGTGCGGTCACAGCCTaGGATCCTGTACAAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RSEPVALSQLNPDRSEASCAVTA*DPVQAC Trigger: GCAGGCTTGTACAGGATCTCAGGCTGTGACCGCACA...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR CCA 90 bp | CTTTGCACACTCTGCCTCAGCGCGCTGCCTCCGCTTGATCTCCACGTCCACTTGTCTCCAGCTCCTGGTTaGTTCTTTGATACTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LCTLCLSALPPLDLHVHLSPAPG*FFDTSF Trigger: GAAAGAAGTATCAAAGAACCAACCAGGAGCTGGAGA...CAAGTGGACGTGGAGATCAAGCGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164983.8 ENSMUST00000165730.8 |
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| CDS-3UTR CCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCAGCTCACTGACAGCCTaGTACATGGCGGCTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RSEPVALSQLNPDRSEASSSLTA*YMAAVL Trigger: CAGCACAGCCGCCATGTACCAGGCTGTCAGTGAGCT...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR CCA 90 bp | GAACTGCTAGCTGACTTTTTAAATGGGCTCCACTGGACAAACAAGGGGGTCAGGAGCTCACTGACAGCCTaGTACATGGCGGCTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ELLADFLNGLHWTNKGVRSSLTA*YMAAVL Trigger: CAGCACAGCCGCCATGTACCAGGCTGTCAGTGAGCT...CCTGACCCCCTTGTTTGTCCAGTGGAGCCCATTTAAAAAGTCAGCTAGCAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTGAAGAGCAGACAGGGGTGTCTCGTGCAGTAAACACAGGCAGACACAGCGACACTCTCTGTAGGTaGATCATAAGGAAGGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: EAEEQTGVSRAVNTGRHSDTLCR*IIRKAS Trigger: GCTAGCCTTCCTTATGATCCACCTACAGAGAGTGTC...GCTGTGTCTGCCTGTGTTTACTGCACGAGACACCCCTGTCTGCTCTTCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTGAAGAGCAGACAGGGGTGTCTCGTGCAGTAAACACAGGCAGACACAGCATCTGGGTGTGCTCTTaGAGAGGTTGTACAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: EAEEQTGVSRAVNTGRHSIWVCS*RGCTTS Trigger: AGAGGTTGTACAACCTCTCCAAGAGCACACCCAGAT...GCTGTGTCTGCCTGTGTTTACTGCACGAGACACCCCTGTCTGCTCTTCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR CCA 90 bp | GAGGCTGAAGAGCAGACAGGGGTGTCTCGTGCAGTAAACACAGGCAGACACAGCTCTTGTTCCCAAATCTaGGTGTGCTCTTGGAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: EAEEQTGVSRAVNTGRHSSCSQI*VCSWRG Trigger: ACCTCTCCAAGAGCACACCCAGATTTGGGAACAAGA...GCTGTGTCTGCCTGTGTTTACTGCACGAGACACCCCTGTCTGCTCTTCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR TCA 90 bp | GATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTTCTCTGCTGCCTCCATaGAGGCTTTGCTCAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: DQSLWHFLSLTQTEVKHPSLLPP*RLCSAR Trigger: TCTGGCTGAGCAAAGCCTTCATGGAGGCAGCAGAGA...AGGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR GCA 90 bp | GAGGCTGAAGAGCAGACAGGGGTGTCTCGTGCAGTAAACACAGGCAGACACAGCGAGCAGGGAAAAATTTaGCCTGTTGACCTAAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: EAEEQTGVSRAVNTGRHSEQGKI*PVDLSW Trigger: CCAACTTAGGTCAACAGGGCAAATTTTTCCCTGCTC...GCTGTGTCTGCCTGTGTTTACTGCACGAGACACCCCTGTCTGCTCTTCAGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR CCA 90 bp | GCTGAATCTGTTGTTCCAGCTTTGCACACTCTGCCTCAGCGCGCTGCCTCCGCTTCTCCAGCTCCTGGTTaGTTCTTTGATACTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: AESVVPALHTLPQRAASASPAPG*FFDTSF Trigger: GAAAGAAGTATCAAAGAACCAACCAGGAGCTGGAGA...AGCGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAGCTGGAACAACAGATTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164983.8 ENSMUST00000165730.8 |
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| CDS-3UTR TCA 90 bp | AGAGCGGAGTCACTGTTCACAGGTTGTAAAGGTCCTGACTTCCCGCGACTCCTGCAGATGTGTCACACATaGGTATGTCTCGAATCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RAESLFTGCKGPDFPRLLQMCHT*VCLESA Trigger: AGCTGATTCGAGACATACTCATGTGTGACACATCTG...CAGGAGTCGCGGGAAGTCAGGACCTTTACAACCTGTGAACAGTGACTCCGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
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| CDS-3UTR TCA 90 bp | CTCCAAGCTTCTTGTCAGTCCCCGAAGGAGGAAGAGGCCTGTGTTCTGAGAAGGTCAACAATAGGTCTTTaGATTTCTCCAGCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LQASCQSPKEEEACVLRRSTIGL*ISPAPG Trigger: ACCAGGAGCTGGAGAAATTCAAAGACCTATTGTTGA...CCTTCTCAGAACACAGGCCTCTTCCTCCTTCGGGGACTGACAAGAAGCTTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS-3UTR TCA 90 bp | AGAGCGGAGTCACTGTTCACAGGTTGTAAAGGTCCTGACTTCCCGCGACTCCTGTCAACAATAGGTCTTTaGATTTCTCCAGCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: RAESLFTGCKGPDFPRLLSTIGL*ISPAPG Trigger: ACCAGGAGCTGGAGAAATTCAAAGACCTATTGTTGA...CAGGAGTCGCGGGAAGTCAGGACCTTTACAACCTGTGAACAGTGACTCCGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
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| CDS-3UTR TCA 90 bp | CTCCAAGCTTCTTGTCAGTCCCCGAAGGAGGAAGAGGCCTGTGTTCTGAGAAGGATGTCTCGAATCAGCTaGATCTGTTGTTCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQASCQSPKEEEACVLRRMSRIS*ICCSSF Trigger: AAAGCTGGAACAACAGATTCAGCTGATTCGAGACAT...CCTTCTCAGAACACAGGCCTCTTCCTCCTTCGGGGACTGACAAGAAGCTTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCACGCTGTGTGAGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACCAGATGTGTCACACATaGGTATGTCTCGAATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TARCVRSEPVALSQLNPDQMCHT*VCLESA Trigger: AGCTGATTCGAGACATACTCATGTGTGACACATCTG...GTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCTCACACAGCGTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCACAGCTTGCCAAACTTaGTCCGCTTTCCACACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSEPVALSQLNPDRSEASTACQT*SAFHTE Trigger: TTCCGTGTGGAAAGCGGATCAAGTTTGGCAAGCTGT...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTTAGTGTCTGGACTCTaGGACACTCTCTGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSEPVALSQLNPDRSEASLVSGL*DTLCRW Trigger: CCACCTACAGAGAGTGTCTCAGAGTCCAGACACTAA...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GAACTGCTAGCTGACTTTTTAAATGGGCTCCACTGGACAAACAAGGGGGTCAGGTTAGTGTCTGGACTCTaGGACACTCTCTGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELLADFLNGLHWTNKGVRLVSGL*DTLCRW Trigger: CCACCTACAGAGAGTGTCTCAGAGTCCAGACACTAA...CCTGACCCCCTTGTTTGTCCAGTGGAGCCCATTTAAAAAGTCAGCTAGCAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTTCCCCTTCGGCCCTGGTAAAGATCTCCTATTTTAAAGCTCCCGACAACTCAGTTCTTTCACTGTaGGGTCACAGCCTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PISPSALVKISYFKAPDNSVLSL*GHSLRS Trigger: GGATCTCAGGCTGTGACCGCACAGTGAAAGAACTGA...GTTGTCGGGAGCTTTAAAATAGGAGATCTTTACCAGGGCCGAAGGGGAAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR GCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTCAGTTCTTTCACTGTaGGGTCACAGCCTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RSEPVALSQLNPDRSEASSVLSL*GHSLRS Trigger: GGATCTCAGGCTGTGACCGCACAGTGAAAGAACTGA...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCACGCTGTGTGAGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACGAGCAGGGAAAAATTTaGCCTGTTGACCTAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TARCVRSEPVALSQLNPDEQGKI*PVDLSW Trigger: CCAACTTAGGTCAACAGGGCAAATTTTTCCCTGCTC...GTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCTCACACAGCGTGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCACGCTGTGTGAGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACATCCATCTTAGTGTCTaGACTCTGAGACACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TARCVRSEPVALSQLNPDIHLSV*TLRHSL Trigger: CAGAGAGTGTCTCAGAGTCCAGACACTAAGATGGAT...GTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCTCACACAGCGTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GGAACACAAGATTCAGGCTTAATAACCGTCTTTGAGACGAAGTCGTGCAAGCGCTGTTCCTCGCTCAGCTaGATACTGCCAGATGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTQDSGLITVFETKSCKRCSSLS*ILPDVS Trigger: TGACACATCTGGCAGTATTCAGCTGAGCGAGGAACA...GCGCTTGCACGACTTCGTCTCAAAGACGGTTATTAAGCCTGAATCTTGTGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCTGAAGAGCAGACAGGGGTGTCTCGTGCAGTAAACACAGGCAGACACAGCAGTTTTTGCAACTATTaGTTCATTTGCCTGGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EAEEQTGVSRAVNTGRHSSFCNY*FICLVY Trigger: GTAGACCAGGCAAATGAATCAATAGTTGCAAAAACT...GCTGTGTCTGCCTGTGTTTACTGCACGAGACACCCCTGTCTGCTCTTCAGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR GCA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTCAGCTTTGCACACTCTaGCTCAGCGCGCTGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DLFHRKTSPKTEAANFLAQLCTL*LSALPP Trigger: CGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAGCTG...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGCTAGCTGACTTTTTAAATGGGCTCCACTGGACAAACAAGGGGGTCAGGGACACTCTCTGTAGGTaGATCATAAGGAAGGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELLADFLNGLHWTNKGVRDTLCR*IIRKAS Trigger: GCTAGCCTTCCTTATGATCCACCTACAGAGAGTGTC...CCTGACCCCCTTGTTTGTCCAGTGGAGCCCATTTAAAAAGTCAGCTAGCAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| 3UTR CAA 72 bp | GCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTaGACTGCAAAATCCAGGCAGAGGCTGGCTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASERIRLQINLT*TAKSRQRLARN Trigger: GTTTCTAGCCAGCCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTCCTGGTTGGTTCTTTaGTACTTCTTTCGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSEPVALSQLNPDRSEASSWLVL*YFFRKS Trigger: GGACTTCCGAAAGAAGTATCAAAGAACCAACCAGGA...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGTGTTCCTCGCTCAGCTaGATACTGCCAGATGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASERIRLQINLTLTAKSRCSSLS*ILPDVS Trigger: TGACACATCTGGCAGTATTCAGCTGAGCGAGGAACA...CCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCAAAAATTTGCCCTGTTaGCCTAAGTTGGTGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSEPVALSQLNPDRSEASKNLPC*PKLVAD Trigger: GTCTGCCACCAACTTAGGTCAACAGGGCAAATTTTT...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTTCCCCTTCGGCCCTGGTAAAGATCTCCTATTTTAAAGCTCCCGACAACCAGTATTCTGAGGTGTaGCCAAATTGTCTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PISPSALVKISYFKAPDNQYSEV*PNCLCQ Trigger: CTGACACAGACAATTTGGGCACACCTCAGAATACTG...GTTGTCGGGAGCTTTAAAATAGGAGATCTTTACCAGGGCCGAAGGGGAAATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR GCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCATCTGTTATCTCTGCTaGCTCCATGAAGGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSEPVALSQLNPDRSEASICYLC*LHEGFA Trigger: AGCAAAGCCTTCATGGAGGCAGCAGAGATAACAGAT...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCATCCATCTTAGTGTCTaGACTCTGAGACACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSEPVALSQLNPDRSEASIHLSV*TLRHSL Trigger: CAGAGAGTGTCTCAGAGTCCAGACACTAAGATGGAT...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CCA 90 bp | GAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCAGAGGCCTGTTGACCTAAGTTaGTGGCAGACTTGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERIRLQINLTLTAKSRQRPVDLS*WQTCSC Trigger: ACAAGAGCAAGTCTGCCACCAACTTAGGTCAACAGG...CCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | CCACACGGAACACAAGATTCAGGCTTAATAACCGTCTTTGAGACGAAGTCGTGCTCCTGGTTGGTTCTTTaGTACTTCTTTCGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PHGTQDSGLITVFETKSCSWLVL*YFFRKS Trigger: GGACTTCCGAAAGAAGTATCAAAGAACCAACCAGGA...GCACGACTTCGTCTCAAAGACGGTTATTAAGCCTGAATCTTGTGTTCCGTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTACTGTTGGAGCGCCTCTTCTCTCGTTTCTTCATTTTGAAATTCTTCACCATCTCCACGTCCACTTaGTTACGGGCATGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLLERLFSRFFILKFFTISTST*LRACFS Trigger: GCTGAAGCATGCCCGTAATCAAGTGGACGTGGAGAT...GGTGAAGAATTTCAAAATGAAGAAACGAGAGAAGAGGCGCTCCAACAGTAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
||
| CDS-3UTR TCA 90 bp | GAACTGCTAGCTGACTTTTTAAATGGGCTCCACTGGACAAACAAGGGGGTCAGGATGTCTCGAATCAGCTaGATCTGTTGTTCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELLADFLNGLHWTNKGVRMSRIS*ICCSSF Trigger: AAAGCTGGAACAACAGATTCAGCTGATTCGAGACAT...CCTGACCCCCTTGTTTGTCCAGTGGAGCCCATTTAAAAAGTCAGCTAGCAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | CCCATTTCCCCTTCGGCCCTGGTAAAGATCTCCTATTTTAAAGCTCCCGACAACAGAATCCCAGTCCAGTaGTTCATCAGTCTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PISPSALVKISYFKAPDNRIPVQ*FISLVK Trigger: TTTGACAAGACTGATGAATCACTGGACTGGGATTCT...GTTGTCGGGAGCTTTAAAATAGGAGATCTTTACCAGGGCCGAAGGGGAAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTTTGATAAAGGAGTCTTaGCAAGCTGGAATTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DQSLWHFLSLTQTEVKHPLIKES*QAGIQE Trigger: CTCCTGAATTCCAGCTTGTCAAGACTCCTTTATCAA...AGGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCAGAGGAAAAATTTGCCCTGTTaGCCTAAGTTGGTGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERIRLQINLTLTAKSRQRKNLPC*PKLVAD Trigger: GTCTGCCACCAACTTAGGTCAACAGGGCAAATTTTT...CCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR GCA 90 bp | GATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTTTCATCTGTTATCTCTaGTGCCTCCATGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DQSLWHFLSLTQTEVKHPFICYL*CLHEGF Trigger: AAAGCCTTCATGGAGGCAGCAGAGATAACAGATGAA...AGGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR GCA 90 bp | GGCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGTCCCAAATCTGGGTGTaGTCTTGGAGAGGTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GIRTNSASDQPDFDCKIQSQIWV*SWRGCT Trigger: TGTACAACCTCTCCAAGAGCACACCCAGATTTGGGA...CTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CCA 90 bp | GCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGATCTGGGTGTGCTCTTaGAGAGGTTGTACAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASERIRLQINLTLTAKSRIWVCS*RGCTTS Trigger: AGAGGTTGTACAACCTCTCCAAGAGCACACCCAGAT...CCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CCA 90 bp | GGCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGCCTGTTGACCTAAGTTaGTGGCAGACTTGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GIRTNSASDQPDFDCKIQPVDLS*WQTCSC Trigger: ACAAGAGCAAGTCTGCCACCAACTTAGGTCAACAGG...CTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCAGAGGTCAACAATAGGTCTTTaGATTTCTCCAGCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERIRLQINLTLTAKSRQRSTIGL*ISPAPG Trigger: ACCAGGAGCTGGAGAAATTCAAAGACCTATTGTTGA...CCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GGCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGCAGATGTGTCACACATaGGTATGTCTCGAATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GIRTNSASDQPDFDCKIQQMCHT*VCLESA Trigger: AGCTGATTCGAGACATACTCATGTGTGACACATCTG...CTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCAGAGGCCTTCACAACCTGGATaGATTCAATGCTTTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERIRLQINLTLTAKSRQRPSQPG*IQCFHF Trigger: GAAATGAAAGCATTGAATTCATCCAGGTTGTGAAGG...CCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GAACTGCTAGCTGACTTTTTAAATGGGCTCCACTGGACAAACAAGGGGGTCAGGAGTTTTTGCAACTATTaGTTCATTTGCCTGGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: ELLADFLNGLHWTNKGVRSFCNY*FICLVY Trigger: GTAGACCAGGCAAATGAATCAATAGTTGCAAAAACT...CCTGACCCCCTTGTTTGTCCAGTGGAGCCCATTTAAAAAGTCAGCTAGCAGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CCA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCAAGTCCTTCACAACCTaGATGAATTCAATGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSEPVALSQLNPDRSEASKSFTT*MNSMLS Trigger: TGAAAGCATTGAATTCATCCAGGTTGTGAAGGACTT...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CCA 90 bp | GCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGTCTCCAGCTCCTGGTTaGTTCTTTGATACTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASERIRLQINLTLTAKSRSPAPG*FFDTSF Trigger: GAAAGAAGTATCAAAGAACCAACCAGGAGCTGGAGA...CCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCCTTCACAACCTGGATaGATTCAATGCTTTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASERIRLQINLTLTAKSRPSQPG*IQCFHF Trigger: GAAATGAAAGCATTGAATTCATCCAGGTTGTGAAGG...CCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTACAGCTTGCCAAACTTaGTCCGCTTTCCACACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLFHRKTSPKTEAANFLATACQT*SAFHTE Trigger: TTCCGTGTGGAAAGCGGATCAAGTTTGGCAAGCTGT...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTACTGTTGGAGCGCCTCTTCTCTCGTTTCTTCATTTTGAAATTCTTCACCATGTCTCGAATCAGCTaGATCTGTTGTTCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLLERLFSRFFILKFFTMSRIS*ICCSSF Trigger: AAAGCTGGAACAACAGATTCAGCTGATTCGAGACAT...GGTGAAGAATTTCAAAATGAAGAAACGAGAGAAGAGGCGCTCCAACAGTAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
||
| CDS-3UTR GCA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTTCCCAAATCTGGGTGTaGTCTTGGAGAGGTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DLFHRKTSPKTEAANFLASQIWV*SWRGCT Trigger: TGTACAACCTCTCCAAGAGCACACCCAGATTTGGGA...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CCA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTTCTTGTTCCCAAATCTaGGTGTGCTCTTGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLFHRKTSPKTEAANFLASCSQI*VCSWRG Trigger: ACCTCTCCAAGAGCACACCCAGATTTGGGAACAAGA...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR GCA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTCAGTATTCTGAGGTGTaGCCAAATTGTCTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLFHRKTSPKTEAANFLAQYSEV*PNCLCQ Trigger: CTGACACAGACAATTTGGGCACACCTCAGAATACTG...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR GCA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTATCTGTTATCTCTGCTaGCTCCATGAAGGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLFHRKTSPKTEAANFLAICYLC*LHEGFA Trigger: AGCAAAGCCTTCATGGAGGCAGCAGAGATAACAGAT...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR TCA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTAGAATCCCAGTCCAGTaGTTCATCAGTCTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLFHRKTSPKTEAANFLARIPVQ*FISLVK Trigger: TTTGACAAGACTGATGAATCACTGGACTGGGATTCT...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CCA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTAAGTCCTTCACAACCTaGATGAATTCAATGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLFHRKTSPKTEAANFLAKSFTT*MNSMLS Trigger: TGAAAGCATTGAATTCATCCAGGTTGTGAAGGACTT...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCACAGGTTGTAAAGGTCCTGACTTCCCGCGACTCCTGGTCCAGGACGGCAGTGGCCACTGGATGCTaGGCCTCGGTTGAGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSQVVKVLTSRDSWSRTAVATGC*ASVEES Trigger: GCTTTCCTCAACCGAGGCCAAGCATCCAGTGGCCAC...TGCCGTCCTGGACCAGGAGTCGCGGGAAGTCAGGACCTTTACAACCTGTGAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGAAGAGCAGACAGGGGTGTCTCGTGCAGTAAACACAGGCAGACACAGCAGGGGCTCTTTGAGGTaGCGCAGGAAGTCCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EAEEQTGVSRAVNTGRHSRGSLR*RRKSFR Trigger: CCTGAAGGACTTCCTGCGCAACCTCAAAGAGCCCCT...GCTGTGTCTGCCTGTGTTTACTGCACGAGACACCCCTGTCTGCTCTTCAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGCTTCTTGTCAGTCCCCGAAGGAGGAAGAGGCCTGTGTTCTGAGAAGGGTCAGGAGGGGCTCTTaGAGGTTGCGCAGGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQASCQSPKEEEACVLRRVRRGS*RLRRKS Trigger: GGACTTCCTGCGCAACCTCAAAGAGCCCCTCCTGAC...CCTTCTCAGAACACAGGCCTCTTCCTCCTTCGGGGACTGACAAGAAGCTTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS GCA 90 bp | TCATTGACACAGCTGACGACAATGGCAGGGATCATGGGAGAAGCCTaGGACACGAAGTCGGCCAGCATGCCCTCTCCAATCTTAACCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLTQLTTMAGIMGEA*DTKSASMPSPILTG Trigger: ACCGGTTAAGATTGGAGAGGGCATGCTGGCCGACTTCGTGTCGCAGGCTTCTCCCATGATCCCTGCCATTGTCGTCAGCTGTGTCAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGAAGAGCAGACAGGGGTGTCTCGTGCAGTAAACACAGGCAGACACAGCTGGATATCGTCCACTTaGCTGAGGAGGGGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: EAEEQTGVSRAVNTGRHSWISST*LRRGTV Trigger: AACTGTGCCCCTCCTCAGCAAAGTGGACGATATCCA...GCTGTGTCTGCCTGTGTTTACTGCACGAGACACCCCTGTCTGCTCTTCAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGCACACTCTGCCTCAGCGCGCTGCCTCCGCTTGATCTCCACGTCCACTTGCTTTCATTTCCTTCATaGATAATCTCCATCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LCTLCLSALPPLDLHVHLLSFPS*IISIRR Trigger: GCGCCGGATGGAGATTATCAATGAAGGAAATGAAAG...CAAGTGGACGTGGAGATCAAGCGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164983.8 ENSMUST00000165730.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCGGAGTCACTGTTCACAGGTTGTAAAGGTCCTGACTTCCCGCGACTCCTGGATCTCCACGTCCACTaGATTACGGGCATGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RAESLFTGCKGPDFPRLLDLHVH*ITGMLQ Trigger: CTGAAGCATGCCCGTAATCAAGTGGACGTGGAGATC...CAGGAGTCGCGGGAAGTCAGGACCTTTACAACCTGTGAACAGTGACTCCGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
||
| CDS-3UTR CAA 90 bp | CCCATTTCCCCTTCGGCCCTGGTAAAGATCTCCTATTTTAAAGCTCCCGACAACGTGGCCACTGGATGCTaGGCCTCGGTTGAGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PISPSALVKISYFKAPDNVATGC*ASVEES Trigger: GCTTTCCTCAACCGAGGCCAAGCATCCAGTGGCCAC...GTTGTCGGGAGCTTTAAAATAGGAGATCTTTACCAGGGCCGAAGGGGAAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GAACTGCTAGCTGACTTTTTAAATGGGCTCCACTGGACAAACAAGGGGGTCAGGGTGGCCACTGGATGCTaGGCCTCGGTTGAGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELLADFLNGLHWTNKGVRVATGC*ASVEES Trigger: GCTTTCCTCAACCGAGGCCAAGCATCCAGTGGCCAC...CCTGACCCCCTTGTTTGTCCAGTGGAGCCCATTTAAAAAGTCAGCTAGCAGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GAACTGCTAGCTGACTTTTTAAATGGGCTCCACTGGACAAACAAGGGGGTCAGGGTCAGGAGGGGCTCTTaGAGGTTGCGCAGGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELLADFLNGLHWTNKGVRVRRGS*RLRRKS Trigger: GGACTTCCTGCGCAACCTCAAAGAGCCCCTCCTGAC...CCTGACCCCCTTGTTTGTCCAGTGGAGCCCATTTAAAAAGTCAGCTAGCAGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GCTGAATCTGTTGTTCCAGCTTTGCACACTCTGCCTCAGCGCGCTGCCTCCGCTCTTTCATTTCCTTCATaGATAATCTCCATCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AESVVPALHTLPQRAASALSFPS*IISIRR Trigger: GCGCCGGATGGAGATTATCAATGAAGGAAATGAAAG...AGCGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAGCTGGAACAACAGATTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164983.8 ENSMUST00000165730.8 |
||
| CDS-3UTR CAA 90 bp | GATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTAGGGGCTCTTTGAGGTaGCGCAGGAAGTCCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQSLWHFLSLTQTEVKHPRGSLR*RRKSFR Trigger: CCTGAAGGACTTCCTGCGCAACCTCAAAGAGCCCCT...AGGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GCTGAATCTGTTGTTCCAGCTTTGCACACTCTGCCTCAGCGCGCTGCCTCCGCTTTCAACAATAGGTCTTaGAATTTCTCCAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AESVVPALHTLPQRAASAFNNRS*NFSSSW Trigger: CCAGGAGCTGGAGAAATTCAAAGACCTATTGTTGAA...AGCGGAGGCAGCGCGCTGAGGCAGAGTGTGCAAAGCTGGAACAACAGATTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164983.8 ENSMUST00000165730.8 |
||
| CDS-3UTR CAA 90 bp | GAACTGCTAGCTGACTTTTTAAATGGGCTCCACTGGACAAACAAGGGGGTCAGGTGTCTGTGTCAGTTCTaGGCTCCAGTGGCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ELLADFLNGLHWTNKGVRCLCQF*APVACC Trigger: ACAGCAGGCCACTGGAGCCAAGAACTGACACAGACA...CCTGACCCCCTTGTTTGTCCAGTGGAGCCCATTTAAAAAGTCAGCTAGCAGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | CCCATTTCCCCTTCGGCCCTGGTAAAGATCTCCTATTTTAAAGCTCCCGACAACTGTCTGTGTCAGTTCTaGGCTCCAGTGGCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PISPSALVKISYFKAPDNCLCQF*APVACC Trigger: ACAGCAGGCCACTGGAGCCAAGAACTGACACAGACA...GTTGTCGGGAGCTTTAAAATAGGAGATCTTTACCAGGGCCGAAGGGGAAATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCCTGGTGTGCGTGGTGTaGAGTTTCCATTGCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSEPVALSQLNPDRSEASLVCVV*SFHCLA Trigger: AGCGAGGCAATGGAAACTCAACACCACGCACACCAG...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGCTTCTTGTCAGTCCCCGAAGGAGGAAGAGGCCTGTGTTCTGAGAAGGCTCCTGGTTGGTTCTTaGATACTTCTTTCGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQASCQSPKEEEACVLRRLLVGS*ILLSEV Trigger: GACTTCCGAAAGAAGTATCAAAGAACCAACCAGGAG...CCTTCTCAGAACACAGGCCTCTTCCTCCTTCGGGGACTGACAAGAAGCTTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GAACTGCTAGCTGACTTTTTAAATGGGCTCCACTGGACAAACAAGGGGGTCAGGGACAGCTTGCCAAACTaGATCCGCTTTCCACACGGA | + |
|
Preference number: 5 (lower is better) Translates to: ELLADFLNGLHWTNKGVRDSLPN*IRFPHG Trigger: TCCGTGTGGAAAGCGGATCAAGTTTGGCAAGCTGTC...CCTGACCCCCTTGTTTGTCCAGTGGAGCCCATTTAAAAAGTCAGCTAGCAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTGACAGCTTGCCAAACTaGATCCGCTTTCCACACGGA | + |
|
Preference number: 5 (lower is better) Translates to: DQSLWHFLSLTQTEVKHPDSLPN*IRFPHG Trigger: TCCGTGTGGAAAGCGGATCAAGTTTGGCAAGCTGTC...AGGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCGGTGTTGAGTTTCCATaGCCTCGCTGGCTGTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: RSEPVALSQLNPDRSEASGVEFP*PRWLSM Trigger: CATAGACAGCCAGCGAGGCAATGGAAACTCAACACC...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCTGGTGTGCGTGGTGTaGAGTTTCCATTGCCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASERIRLQINLTLTAKSRLVCVV*SFHCLA Trigger: AGCGAGGCAATGGAAACTCAACACCACGCACACCAG...CCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GGCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGATCTCCACGTCCACTaGATTACGGGCATGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GIRTNSASDQPDFDCKIQDLHVH*ITGMLQ Trigger: CTGAAGCATGCCCGTAATCAAGTGGACGTGGAGATC...CTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCCACTTCAGAGACAGCTaGCCAAACTTGATCCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSEPVALSQLNPDRSEASHFRDS*PNLIRF Trigger: AAAGCGGATCAAGTTTGGCAAGCTGTCTCTGAAGTG...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTCACTTCAGAGACAGCTaGCCAAACTTGATCCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DQSLWHFLSLTQTEVKHPHFRDS*PNLIRF Trigger: AAAGCGGATCAAGTTTGGCAAGCTGTCTCTGAAGTG...AGGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GGCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGTGGATATCGTCCACTTaGCTGAGGAGGGGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GIRTNSASDQPDFDCKIQWISST*LRRGTV Trigger: AACTGTGCCCCTCCTCAGCAAAGTGGACGATATCCA...CTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGGGTGTTGAGTTTCCATaGCCTCGCTGGCTGTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: ASERIRLQINLTLTAKSRGVEFP*PRWLSM Trigger: CATAGACAGCCAGCGAGGCAATGGAAACTCAACACC...CCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCACGCTGTGTGAGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACCTTGATAAAGGAGTCTaGACAAGCTGGAATTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TARCVRSEPVALSQLNPDLDKGV*TSWNSG Trigger: TCCTGAATTCCAGCTTGTCAAGACTCCTTTATCAAG...GTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCTCACACAGCGTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTAAGTTGGTGGCAGACTaGCTCTTGTTCCCAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: DQSLWHFLSLTQTEVKHPKLVAD*LLFPNL Trigger: CAGATTTGGGAACAAGAGCAAGTCTGCCACCAACTT...AGGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | CCCATTTCCCCTTCGGCCCTGGTAAAGATCTCCTATTTTAAAGCTCCCGACAACCTTTCATTTCCTTCATaGATAATCTCCATCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PISPSALVKISYFKAPDNLSFPS*IISIRR Trigger: GCGCCGGATGGAGATTATCAATGAAGGAAATGAAAG...GTTGTCGGGAGCTTTAAAATAGGAGATCTTTACCAGGGCCGAAGGGGAAATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTAATCAGCTGAATCTGTaGTTCCAGCTTTGCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: DQSLWHFLSLTQTEVKHPNQLNL*FQLCTL Trigger: GAGTGTGCAAAGCTGGAACAACAGATTCAGCTGATT...AGGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCAGAGGAATCAGCTGAATCTGTaGTTCCAGCTTTGCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: ERIRLQINLTLTAKSRQRNQLNL*FQLCTL Trigger: GAGTGTGCAAAGCTGGAACAACAGATTCAGCTGATT...CCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GGCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGAAGTTGGTGGCAGACTaGCTCTTGTTCCCAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: GIRTNSASDQPDFDCKIQKLVAD*LLFPNL Trigger: CAGATTTGGGAACAAGAGCAAGTCTGCCACCAACTT...CTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS TCA 90 bp | AAGACTTTAGCTAGATTGGCAATATCCATCTTAGTGTCTGGACTCTaGGACACTCTCTGTAGGTGGATCATAAGGAAGGCTAGCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KTLARLAISILVSGL*DTLCRWIIRKASVS Trigger: GGACACGCTAGCCTTCCTTATGATCCACCTACAGAGAGTGTCTCAGAGTCCAGACACTAAGATGGATATTGCCAATCTAGCTAAAGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCAGAGGTTCAACAATAGGTCTTaGAATTTCTCCAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ERIRLQINLTLTAKSRQRFNNRS*NFSSSW Trigger: CCAGGAGCTGGAGAAATTCAAAGACCTATTGTTGAA...CCTCTGCCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | CCACACGGAACACAAGATTCAGGCTTAATAACCGTCTTTGAGACGAAGTCGTGCTTCAACAATAGGTCTTaGAATTTCTCCAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHGTQDSGLITVFETKSCFNNRS*NFSSSW Trigger: CCAGGAGCTGGAGAAATTCAAAGACCTATTGTTGAA...GCACGACTTCGTCTCAAAGACGGTTATTAAGCCTGAATCTTGTGTTCCGTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
||
| CDS-3UTR CAA 90 bp | GCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGTTCAACAATAGGTCTTaGAATTTCTCCAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASERIRLQINLTLTAKSRFNNRS*NFSSSW Trigger: CCAGGAGCTGGAGAAATTCAAAGACCTATTGTTGAA...CCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTGATCTCCACGTCCACTaGATTACGGGCATGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DLFHRKTSPKTEAANFLADLHVH*ITGMLQ Trigger: CTGAAGCATGCCCGTAATCAAGTGGACGTGGAGATC...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | AGATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCAAGACTTTAGCTAGATaGGCAATATCCATCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSEPVALSQLNPDRSEASKTLAR*AISILV Trigger: CACTAAGATGGATATTGCCAATCTAGCTAAAGTCTT...GGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GATCAGAGCCTGTGGCACTTTCTCAGCTTAACCCAGACAGAAGTGAAGCATCCTAAGACTTTAGCTAGATaGGCAATATCCATCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DQSLWHFLSLTQTEVKHPKTLAR*AISILV Trigger: CACTAAGATGGATATTGCCAATCTAGCTAAAGTCTT...AGGATGCTTCACTTCTGTCTGGGTTAAGCTGAGAAAGTGCCACAGGCTCTGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | GCATCAGAACGAATTCGGCTTCAGATCAACCTGACTTTGACTGCAAAATCCAGGCTTGATAAAGGAGTCTaGACAAGCTGGAATTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASERIRLQINLTLTAKSRLDKGV*TSWNSG Trigger: TCCTGAATTCCAGCTTGTCAAGACTCCTTTATCAAG...CCTGGATTTTGCAGTCAAAGTCAGGTTGATCTGAAGCCGAATTCGTTCTGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTACTGTTGGAGCGCCTCTTCTCTCGTTTCTTCATTTTGAAATTCTTCACCAATCAGCTGAATCTGTaGTTCCAGCTTTGCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: CLLLERLFSRFFILKFFTNQLNL*FQLCTL Trigger: GAGTGTGCAAAGCTGGAACAACAGATTCAGCTGATT...GGTGAAGAATTTCAAAATGAAGAAACGAGAGAAGAGGCGCTCCAACAGTAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168065.8 |
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| CDS-3UTR CAA 90 bp | GATCTGTTTCACAGAAAAACTTCACCAAAGACAGAAGCAGCTAACTTTCTTGCTCTTTCATTTCCTTCATaGATAATCTCCATCCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: DLFHRKTSPKTEAANFLALSFPS*IISIRR Trigger: GCGCCGGATGGAGATTATCAATGAAGGAAATGAAAG...AGCAAGAAAGTTAGCTGCTTCTGTCTTTGGTGAAGTTTTTCTGTGAAACAGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS TCA 72 bp | AGGCTTTGCTCAGCCAGAAGGTCAGGAGGGGCTCTTTaGGGTTGCGCAGGAAGTCCTTCAGGAGGCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RLCSARRSGGAL*GCAGSPSGGCR Trigger: TCTGCAGCCTCCTGAAGGACTTCCTGCGCAACCTCAAAGAGCCCCTCCTGACCTTCTGGCTGAGCAAAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS CAA 72 bp | TTGCTCAGCCAGAAGGTCAGGAGGGGCTCTTTGAGGTaGCGCAGGAAGTCCTTCAGGAGGCTGCAGATGACG | + |
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Preference number: 6 (lower is better) Translates to: LLSQKVRRGSLR*RRKSFRRLQMT Trigger: CGTCATCTGCAGCCTCCTGAAGGACTTCCTGCGCAACCTCAAAGAGCCCCTCCTGACCTTCTGGCTGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS CAA 72 bp | AAGGCTTTGCTCAGCCAGAAGGTCAGGAGGGGCTCTTaGAGGTTGCGCAGGAAGTCCTTCAGGAGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: KALLSQKVRRGS*RLRRKSFRRLQ Trigger: CTGCAGCCTCCTGAAGGACTTCCTGCGCAACCTCAAAGAGCCCCTCCTGACCTTCTGGCTGAGCAAAGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS CAA 72 bp | AAGCCTGCCTCAGTCAGGCCTCGCTGCTCGATCTCATaGACACAGCTGACGACAATGGCAGGGATCATGGGA | + |
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Preference number: 6 (lower is better) Translates to: KPASVRPRCSIS*TQLTTMAGIMG Trigger: TCCCATGATCCCTGCCATTGTCGTCAGCTGTGTCAATGAGATCGAGCAGCGAGGCCTGACTGAGGCAGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS CAA 90 bp | ATGAAGGCTTTGCTCAGCCAGAAGGTCAGGAGGGGCTCTTTGAGGTaGCGCAGGAAGTCCTTCAGGAGGCTGCAGATGACGTGGATATCG | + |
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Preference number: 6 (lower is better) Translates to: MKALLSQKVRRGSLR*RRKSFRRLQMTWIS Trigger: CGATATCCACGTCATCTGCAGCCTCCTGAAGGACTTCCTGCGCAACCTCAAAGAGCCCCTCCTGACCTTCTGGCTGAGCAAAGCCTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023756.12 ENSMUST00000171702.8 |
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| CDS CCA 72 bp | TACTTCTTTCGGAAGTCCTCGAAGTCCTTCACAACCTaGATGAATTCAATGCTTTCATTTCCTTCATTGATA | + |
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Preference number: 6 (lower is better) Translates to: YFFRKSSKSFTT*MNSMLSFPSLI Trigger: TATCAATGAAGGAAATGAAAGCATTGAATTCATCCAGGTTGTGAAGGACTTCGAGGACTTCCGAAAGAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023756.12 ENSMUST00000169810.8 ENSMUST00000171702.8 ENSMUST00000171908.2 |
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