Pregenerated sensors for RAC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033220Ensembl transcript IDs: ENSMUST00000043214.8
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCCCTGATGGCCCCTGGGAACATAGGAGCCTCCCAAATAGGATGTaGCCTATGAACATCCGCCCATCCCCAGGGACCTCCGTGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: VPDGPWEHRSLPNRM*PMNIRPSPGTSVEE Trigger: CTCCTCCACGGAGGTCCCTGGGGATGGGCGGATGTTCATAGGCCACATCCTATTTGGGAGGCTCCTATGTTCCCAGGGGCCATCAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR TCA 90 bp | ATGGCCCCTGGGAACATAGGAGCCTCCCAAATAGGATGTGGCCTATaGACATCCGCCCATCCCCAGGGACCTCCGTGGAGGAGAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: MAPGNIGASQIGCGL*TSAHPQGPPWRREA Trigger: TGCCTCTCTCCTCCACGGAGGTCCCTGGGGATGGGCGGATGTTCATAGGCCACATCCTATTTGGGAGGCTCCTATGTTCCCAGGGGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 90 bp | CGCCACACGGAGAAACAGCAATTCCACCAGCACGTCACTGAGCTTTaGTGGGGACCCTGGAGGGTCAGGACCATTGGGATGGGAGGACTG | + |
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Preference number: 1 (lower is better) Translates to: RHTEKQQFHQHVTEL*WGPWRVRTIGMGGL Trigger: CAGTCCTCCCATCCCAATGGTCCTGACCCTCCAGGGTCCCCACCAAAGCTCAGTGACGTGCTGGTGGAATTGCTGTTTCTCCGTGTGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR TCA 90 bp | AGGCAGACCCAAAACAGGCAGGAAGCCAGGCTCCGTGGTGTCATCTaGTCCCTTCGCCCCACCTTGATCAAGCTGTGCCTGAACTCACTG | + |
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Preference number: 1 (lower is better) Translates to: RQTQNRQEARLRGVI*SLRPTLIKLCLNSL Trigger: CAGTGAGTTCAGGCACAGCTTGATCAAGGTGGGGCGAAGGGATCAGATGACACCACGGAGCCTGGCTTCCTGCCTGTTTTGGGTCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 90 bp | CCCCAGGGACCTCCGTGGAGGAGAGAGGCAAGTTCTGCAGCTAACTaGGAAAGAACGCCACACGGAGAAACAGCAATTCCACCAGCACGT | + |
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Preference number: 1 (lower is better) Translates to: PQGPPWRREASSAAN*ERTPHGETAIPPAR Trigger: ACGTGCTGGTGGAATTGCTGTTTCTCCGTGTGGCGTTCTTTCCCAGTTAGCTGCAGAACTTGCCTCTCTCCTCCACGGAGGTCCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR GCA 90 bp | GATCTGGGTGAAATAAGCTGTCAGGGTGACAGTGGGCTGGCTGTGTaGTCCACAACTCACACAGAGGCTCAAGGTAACAGGCCGGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: DLGEISCQGDSGLAV*STTHTEAQGNRPGF Trigger: AAACCCCGGCCTGTTACCTTGAGCCTCTGTGTGAGTTGTGGAGCACACAGCCAGCCCACTGTCACCCTGACAGCTTATTTCACCCAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR TCA 90 bp | CTTGACCTCGGAGGATCAAGTCCCAAGAATCAATGGCCAGAAAAATaGGCCTGGCAGCAGCAGGCAGACCCAAAACAGGCAGGAAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: LDLGGSSPKNQWPEK*AWQQQADPKQAGSQ Trigger: CTGGCTTCCTGCCTGTTTTGGGTCTGCCTGCTGCTGCCAGGCTCATTTTTCTGGCCATTGATTCTTGGGACTTGATCCTCCGAGGTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 90 bp | TGTATGAGGATGGATGGCTGCATCTTGGGGGTCCCTGATGGCCCCTaGGAACATAGGAGCCTCCCAAATAGGATGTGGCCTATGAACATC | + |
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Preference number: 1 (lower is better) Translates to: CMRMDGCILGVPDGP*EHRSLPNRMWPMNI Trigger: GATGTTCATAGGCCACATCCTATTTGGGAGGCTCCTATGTTCCCAGGGGCCATCAGGGACCCCCAAGATGCAGCCATCCATCCTCATACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR TCA 90 bp | AACTCACAGCCAGCCACAGTGCAGCCTCTCTCTGACACACTTGTGTaGTTGAAGGTGGGCCTAAGACAAGCTGGTTCAACCAGAGTGACC | + |
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Preference number: 1 (lower is better) Translates to: NSQPATVQPLSDTLV*LKVGLRQAGSTRVT Trigger: GGTCACTCTGGTTGAACCAGCTTGTCTTAGGCCCACCTTCAATCACACAAGTGTGTCAGAGAGAGGCTGCACTGTGGCTGGCTGTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 90 bp | AAGACAAGCTGGTTCAACCAGAGTGACCTTTCCTTAGAGCTTGCCTaGGGCAGACATCACCTGAACTTGACCTCGGAGGATCAAGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: KTSWFNQSDLSLELA*GRHHLNLTSEDQVP Trigger: TGGGACTTGATCCTCCGAGGTCAAGTTCAGGTGATGTCTGCCCCAGGCAAGCTCTAAGGAAAGGTCACTCTGGTTGAACCAGCTTGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR TCA 90 bp | GGCTTAAAACCTTTCTTTCTGTGTCAGAGAAATCTTGCCCTCCTGTaGGCCAAGCTAAGAACAGAAGCTTCCCTCACTGGGCCAAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GLKPFFLCQRNLALL*AKLRTEASLTGPSP Trigger: GGGGCTTGGCCCAGTGAGGGAAGCTTCTGTTCTTAGCTTGGCTCACAGGAGGGCAAGATTTCTCTGACACAGAAAGAAAGGTTTTAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR GCA 90 bp | AGCACCTGTGGGCTTAAAACCTTTCTTTCTGTGTCAGAGAAATCTTaGCCTCCTGTGAGCCAAGCTAAGAACAGAAGCTTCCCTCACTGG | + |
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Preference number: 1 (lower is better) Translates to: STCGLKTFLSVSEKS*PPVSQAKNRSFPHW Trigger: CCAGTGAGGGAAGCTTCTGTTCTTAGCTTGGCTCACAGGAGGGCAAGATTTCTCTGACACAGAAAGAAAGGTTTTAAGCCCACAGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR GCA 90 bp | AACACATTTATTTTCTGTGTAAGCAAGAGAGCTGTATTTTCCATTTaGTATGGATCGGGTCCTGACTGGCAGGTGGAGTGGACAGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: NTFIFCVSKRAVFSI*YGSGPDWQVEWTVP Trigger: TGGGACTGTCCACTCCACCTGCCAGTCAGGACCCGATCCATAGCAAATGGAAAATACAGCTCTCTTGCTTACACAGAAAATAAATGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTAGGACTGTCTCAGGCCCAGGCCCTGGGTGCCTGATATGGACACCACATGTCCCTGATGGCCCCTaGGAACATAGGAGCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VGRTVSGPGPGCLIWTPHVPDGP*EHRSLP Trigger: TGGGAGGCTCCTATGTTCCCAGGGGCCATCAGGGAC...ATGTGGTGTCCATATCAGGCACCCAGGGCCTGGGCCTGAGACAGTCCTACCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTGCTCCACAACTCACACAGAGGCTCAAGGTAACAGGCCGGGGTTTGCCTCTTTGGTGGGGACCCTaGAGGGTCAGGACCATTGGG | + |
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Preference number: 2 (lower is better) Translates to: LCAPQLTQRLKVTGRGLPLWWGP*RVRTIG Trigger: CCCAATGGTCCTGACCCTCCAGGGTCCCCACCAAAG...AGGCAAACCCCGGCCTGTTACCTTGAGCCTCTGTGTGAGTTGTGGAGCACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTGCTCCACAACTCACACAGAGGCTCAAGGTAACAGGCCGGGGTTTGCCTAGAAGCTTCCCTCACTaGGCCAAGCCCCTCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LCAPQLTQRLKVTGRGLPRSFPH*AKPLQR Trigger: CCTCTGGAGGGGCTTGGCCCAGTGAGGGAAGCTTCT...AGGCAAACCCCGGCCTGTTACCTTGAGCCTCTGTGTGAGTTGTGGAGCACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTGCTCCACAACTCACACAGAGGCTCAAGGTAACAGGCCGGGGTTTGCCTCACAGCCAGCCACAGTaGAGCCTCTCTCTGACACAC | + |
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Preference number: 2 (lower is better) Translates to: LCAPQLTQRLKVTGRGLPHSQPQ*SLSLTH Trigger: GTGTGTCAGAGAGAGGCTGCACTGTGGCTGGCTGTG...AGGCAAACCCCGGCCTGTTACCTTGAGCCTCTGTGTGAGTTGTGGAGCACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGGTAGGACTGTCTCAGGCCCAGGCCCTGGGTGCCTGATATGGACACCACATCAGAATTTAGGAAGCTaGGGCAGGAGGATGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: VGRTVSGPGPGCLIWTPHQNLGS*GRRMAG Trigger: ACCTGCCATCCTCCTGCCTCAGCTTCCTAAATTCTG...ATGTGGTGTCCATATCAGGCACCCAGGGCCTGGGCCTGAGACAGTCCTACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAGGCCATCAAAAGTGTGTTGGGAGAAGGACGTGGAAGCTCAGACAGTGCCGAGGGTCAGGACCATTaGGATGGGAGGACTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RQAIKSVLGEGRGSSDSAEGQDH*DGRTGV Trigger: CACCCCAGTCCTCCCATCCCAATGGTCCTGACCCTC...GGCACTGTCTGAGCTTCCACGTCCTTCTCCCAACACACTTTTGATGGCCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGGGGCAGAAACTGTCCCTGATAATGGTAGAAAGGACACTTACCGTGACCCCCAGGGACCTCCGTaGAGGAGAGAGGCAAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: PAGAETVPDNGRKDTYRDPQGPP*RREASS Trigger: AGAACTTGCCTCTCTCCTCCACGGAGGTCCCTGGGG...GTCACGGTAAGTGTCCTTTCTACCATTATCAGGGACAGTTTCTGCCCCAGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAAGAATTTATTCCCCCAACGCCACACACACCCATTCTATACCCCAGCTCCCCTATGGATCGGGTCCTaGCTGGCAGGTGGAGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LKNLFPQRHTHPFYTPAPLWIGS*LAGGVD Trigger: GTCCACTCCACCTGCCAGTCAGGACCCGATCCATAG...GGGAGCTGGGGTATAGAATGGGTGTGTGTGGCGTTGGGGGAATAAATTCTTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGGGGCAGAAACTGTCCCTGATAATGGTAGAAAGGACACTTACCGTGACTCAGGACCATTGGGATaGGAGGACTGGGGTGACACC | + |
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Preference number: 2 (lower is better) Translates to: PAGAETVPDNGRKDTYRDSGPLG*EDWGDT Trigger: GGTGTCACCCCAGTCCTCCCATCCCAATGGTCCTGA...GTCACGGTAAGTGTCCTTTCTACCATTATCAGGGACAGTTTCTGCCCCAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTAGGACTGTCTCAGGCCCAGGCCCTGGGTGCCTGATATGGACACCACATCCACATCTCTCCCTTTaGTTCAGGGAAGAAGGTATC | + |
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Preference number: 2 (lower is better) Translates to: VGRTVSGPGPGCLIWTPHPHLSL*FREEGI Trigger: GATACCTTCTTCCCTGAACCAAAGGGAGAGATGTGG...ATGTGGTGTCCATATCAGGCACCCAGGGCCTGGGCCTGAGACAGTCCTACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTAGAGCTTGCCTGGGGCAGACATCACCTGAACTTGACCTCGGAGGATCAAAGAGACAGTAGGGGTTaGCTGAGCTCAGACCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SLELAWGRHHLNLTSEDQRDSRG*LSSDPH Trigger: GTGAGGGTCTGAGCTCAGCCAACCCCTACTGTCTCT...TTGATCCTCCGAGGTCAAGTTCAGGTGATGTCTGCCCCAGGCAAGCTCTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGCCAGCTGGGGCAGAAACTGTCCCTGATAATGGTAGAAAGGACACTTACGTCACTGAGCTTTGGTaGGGACCCTGGAGGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LVPAGAETVPDNGRKDTYVTELW*GPWRVR Trigger: CCTGACCCTCCAGGGTCCCCACCAAAGCTCAGTGAC...GTAAGTGTCCTTTCTACCATTATCAGGGACAGTTTCTGCCCCAGCTGGCACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGGGGCAGAAACTGTCCCTGATAATGGTAGAAAGGACACTTACCGTGACGACTGGCAGGTGGAGTaGACAGTCCCAAGAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: PAGAETVPDNGRKDTYRDDWQVE*TVPRRN Trigger: GTTCCTTCTTGGGACTGTCCACTCCACCTGCCAGTC...GTCACGGTAAGTGTCCTTTCTACCATTATCAGGGACAGTTTCTGCCCCAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR TCA 90 bp | AGACAGGCCATCAAAAGTGTGTTGGGAGAAGGACGTGGAAGCTCAGACAGTGCCCTGGTTCAACCAGAGTaGCCTTTCCTTAGAGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: RQAIKSVLGEGRGSSDSALVQPE*PFLRAC Trigger: GCAAGCTCTAAGGAAAGGTCACTCTGGTTGAACCAG...GGCACTGTCTGAGCTTCCACGTCCTTCTCCCAACACACTTTTGATGGCCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGGGGCAGAAACTGTCCCTGATAATGGTAGAAAGGACACTTACCGTGACTCCTTAGAGCTTGCCTaGGGCAGACATCACCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PAGAETVPDNGRKDTYRDSLELA*GRHHLN Trigger: GTTCAGGTGATGTCTGCCCCAGGCAAGCTCTAAGGA...GTCACGGTAAGTGTCCTTTCTACCATTATCAGGGACAGTTTCTGCCCCAGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR GCA 90 bp | GCCATCAAAAGTGTGTTGGGAGAAGGACGTGGAAGCTCAGACAGTGCCACGGTCGCTGTATTTTCCATTTaGTATGGATCGGGTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: AIKSVLGEGRGSSDSATVAVFSI*YGSGPD Trigger: GTCAGGACCCGATCCATAGCAAATGGAAAATACAGC...GACCGTGGCACTGTCTGAGCTTCCACGTCCTTCTCCCAACACACTTTTGATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCCACATCTCTCCCTTTGGTTCAGGGAAGAAGGTATCCCAACATGGCGAACAATGAGGATGGATGGCTaGATCTTGGGGGTCCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: FPHLSLWFREEGIPTWRTMRMDG*ILGVPD Trigger: ATCAGGGACCCCCAAGATGCAGCCATCCATCCTCAT...TGTTCGCCATGTTGGGATACCTTCTTCCCTGAACCAAAGGGAGAGATGTGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCACATCTCTCCCTTTGGTTCAGGGAAGAAGGTATCCCAACATGGCGAACAGAGCAGGTGGGCATATaGCTCTGTATGAGGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: FPHLSLWFREEGIPTWRTEQVGI*LCMRMD Trigger: ATCCATCCTCATACAGAGTCATATGCCCACCTGCTC...TGTTCGCCATGTTGGGATACCTTCTTCCCTGAACCAAAGGGAGAGATGTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 72 bp | TTCCACCAGCACGTCACTGAGCTTTGGTGGGGACCCTaGAGGGTCAGGACCATTGGGATGGGAGGACTGGGG | + |
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Preference number: 3 (lower is better) Translates to: FHQHVTELWWGP*RVRTIGMGGLG Trigger: CCCCAGTCCTCCCATCCCAATGGTCCTGACCCTCCAGGGTCCCCACCAAAGCTCAGTGACGTGCTGGTGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 72 bp | ATGGATGGCTGCATCTTGGGGGTCCCTGATGGCCCCTaGGAACATAGGAGCCTCCCAAATAGGATGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: MDGCILGVPDGP*EHRSLPNRMWP Trigger: AGGCCACATCCTATTTGGGAGGCTCCTATGTTCCCAGGGGCCATCAGGGACCCCCAAGATGCAGCCATCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 72 bp | CAGGCAGACCCAAAACAGGCAGGAAGCCAGGCTCCGTaGTGTCATCTGATCCCTTCGCCCCACCTTGATCAA | + |
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Preference number: 3 (lower is better) Translates to: QADPKQAGSQAP*CHLIPSPHLDQ Trigger: TTGATCAAGGTGGGGCGAAGGGATCAGATGACACCACGGAGCCTGGCTTCCTGCCTGTTTTGGGTCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR TCA 72 bp | GAGAGGTGTCAGGAAGGCCTGGAGCAGGTGGGCATATaGCTCTGTATGAGGATGGATGGCTGCATCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: ERCQEGLEQVGI*LCMRMDGCILG Trigger: CCCCAAGATGCAGCCATCCATCCTCATACAGAGTCATATGCCCACCTGCTCCAGGCCTTCCTGACACCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 72 bp | CCTGTGAGCCAAGCTAAGAACAGAAGCTTCCCTCACTaGGCCAAGCCCCTCCAGAGGTGGAGTCCCTTAAGT | + |
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Preference number: 3 (lower is better) Translates to: PVSQAKNRSFPH*AKPLQRWSPLS Trigger: ACTTAAGGGACTCCACCTCTGGAGGGGCTTGGCCCAGTGAGGGAAGCTTCTGTTCTTAGCTTGGCTCACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGTGCCAGCTGGGGCAGAAACTGTCCCTGATAATGGTAGAAAGGACACTTACGGAGGGTCAGGACCATaGGGATGGGAGGACTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: LVPAGAETVPDNGRKDTYGGSGP*GWEDWG Trigger: ACCCCAGTCCTCCCATCCCAATGGTCCTGACCCTCC...GTAAGTGTCCTTTCTACCATTATCAGGGACAGTTTCTGCCCCAGCTGGCACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR TCA 72 bp | CCAGCCACAGTGCAGCCTCTCTCTGACACACTTGTGTaGTTGAAGGTGGGCCTAAGACAAGCTGGTTCAACC | + |
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Preference number: 3 (lower is better) Translates to: PATVQPLSDTLV*LKVGLRQAGST Trigger: GGTTGAACCAGCTTGTCTTAGGCCCACCTTCAATCACACAAGTGTGTCAGAGAGAGGCTGCACTGTGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR GCA 72 bp | GAAATAAGCTGTCAGGGTGACAGTGGGCTGGCTGTGTaGTCCACAACTCACACAGAGGCTCAAGGTAACAGG | + |
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Preference number: 3 (lower is better) Translates to: EISCQGDSGLAV*STTHTEAQGNR Trigger: CCTGTTACCTTGAGCCTCTGTGTGAGTTGTGGAGCACACAGCCAGCCCACTGTCACCCTGACAGCTTATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 72 bp | CCTCCGTGGAGGAGAGAGGCAAGTTCTGCAGCTAACTaGGAAAGAACGCCACACGGAGAAACAGCAATTCCA | + |
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Preference number: 3 (lower is better) Translates to: PPWRREASSAAN*ERTPHGETAIP Trigger: TGGAATTGCTGTTTCTCCGTGTGGCGTTCTTTCCCAGTTAGCTGCAGAACTTGCCTCTCTCCTCCACGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 72 bp | TTTCCATTTGCTATGGATCGGGTCCTGACTGGCAGGTaGAGTGGACAGTCCCAAGAAGGAACAGCTCTACCC | + |
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Preference number: 3 (lower is better) Translates to: FPFAMDRVLTGR*SGQSQEGTALP Trigger: GGGTAGAGCTGTTCCTTCTTGGGACTGTCCACTCCACCTGCCAGTCAGGACCCGATCCATAGCAAATGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR TCA 72 bp | ATCCCAGCACTTAGGAGGCAGAGGCAGGCAGATTTCTaGGTTCGAGGACAGCCTGGTCTACAAAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IPALRRQRQADF*VRGQPGLQSEF Trigger: GAACTCACTTTGTAGACCAGGCTGTCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTAAGTGCTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR TCA 72 bp | GGGTGGGGGAGGGGTGGAGAACAACACATATGTCACTaGATCTCTGAGACTATGGTAGCACCTGACACAGAC | + |
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Preference number: 3 (lower is better) Translates to: GWGRGGEQHICH*ISETMVAPDTD Trigger: GTCTGTGTCAGGTGCTACCATAGTCTCAGAGATTCAGTGACATATGTGTTGTTCTCCACCCCTCCCCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 72 bp | ATTTGCTATGGATCGGGTCCTGACTGGCAGGTGGAGTaGACAGTCCCAAGAAGGAACAGCTCTACCCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: ICYGSGPDWQVE*TVPRRNSSTLQ Trigger: TTGAAGGGTAGAGCTGTTCCTTCTTGGGACTGTCCACTCCACCTGCCAGTCAGGACCCGATCCATAGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 72 bp | GCTGTATTTTCCATTTGCTATGGATCGGGTCCTGACTaGCAGGTGGAGTGGACAGTCCCAAGAAGGAACAGC | + |
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Preference number: 3 (lower is better) Translates to: AVFSICYGSGPD*QVEWTVPRRNS Trigger: GCTGTTCCTTCTTGGGACTGTCCACTCCACCTGCCAGTCAGGACCCGATCCATAGCAAATGGAAAATACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 72 bp | TGGTTCAACCAGAGTGACCTTTCCTTAGAGCTTGCCTaGGGCAGACATCACCTGAACTTGACCTCGGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: WFNQSDLSLELA*GRHHLNLTSED Trigger: ATCCTCCGAGGTCAAGTTCAGGTGATGTCTGCCCCAGGCAAGCTCTAAGGAAAGGTCACTCTGGTTGAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR TCA 72 bp | GAGAGCTGTATTTTCCATTTGCTATGGATCGGGTCCTaGCTGGCAGGTGGAGTGGACAGTCCCAAGAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: ESCIFHLLWIGS*LAGGVDSPKKE Trigger: TTCCTTCTTGGGACTGTCCACTCCACCTGCCAGTCAGGACCCGATCCATAGCAAATGGAAAATACAGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CCA 72 bp | GGAGAACAGAGGAGCAGATTTCCACATCTCTCCCTTTaGTTCAGGGAAGAAGGTATCCCAACATGGCGAACA | + |
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Preference number: 3 (lower is better) Translates to: GEQRSRFPHLSL*FREEGIPTWRT Trigger: TGTTCGCCATGTTGGGATACCTTCTTCCCTGAACCAAAGGGAGAGATGTGGAAATCTGCTCCTCTGTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR GCA 72 bp | AAGTGTGTTGGGAGAAGGACGTGGAAGCTCAGACAGTaGCACGGTCTTGACCATAGATTGATAATTCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: KCVGRRTWKLRQ*HGLDHRLIIQG Trigger: TCCCTGAATTATCAATCTATGGTCAAGACCGTGGCACTGTCTGAGCTTCCACGTCCTTCTCCCAACACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR GCA 72 bp | ATTTTCTGTGTAAGCAAGAGAGCTGTATTTTCCATTTaGTATGGATCGGGTCCTGACTGGCAGGTGGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: IFCVSKRAVFSI*YGSGPDWQVEW Trigger: CCACTCCACCTGCCAGTCAGGACCCGATCCATAGCAAATGGAAAATACAGCTCTCTTGCTTACACAGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR GCA 90 bp | AGGATGTGGCCTATGAACATCCGCCCATCCCCAGGGACCTCCGTGGAGGAGAGAGTGCTGGGGCAGTGGTaGCGTACCTCAGGGAACCAC | + |
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Preference number: 4 (lower is better) Translates to: RMWPMNIRPSPGTSVEERVLGQW*RTSGNH Trigger: GTGGTTCCCTGAGGTACGGCACCACTGCCCCAGCAC...TCTCTCCTCCACGGAGGTCCCTGGGGATGGGCGGATGTTCATAGGCCACATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR CCA 90 bp | GTAGGTAGGACTGTCTCAGGCCCAGGCCCTGGGTGCCTGATATGGACACCACATGGGGTGCTGGGGCAGTaGTGCCGTACCTCAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VGRTVSGPGPGCLIWTPHGVLGQ*CRTSGN Trigger: GTTCCCTGAGGTACGGCACCACTGCCCCAGCACCCC...ATGTGGTGTCCATATCAGGCACCCAGGGCCTGGGCCTGAGACAGTCCTACCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR CCA 90 bp | AGTGTGTTGGGAGAAGGACGTGGAAGCTCAGACAGTGCCACGGTCTTGACCATACTGTCGTGTGGGCTGTaGGCAGAGGACTGCGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: SVLGEGRGSSDSATVLTILSCGL*AEDCAD Trigger: ATCCGCGCAGTCCTCTGCCCACAGCCCACACGACAG...TATGGTCAAGACCGTGGCACTGTCTGAGCTTCCACGTCCTTCTCCCAACACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR TCA 90 bp | CCAGCTGGGGCAGAAACTGTCCCTGATAATGGTAGAAAGGACACTTACCGTGACTGGTACCCACCAGGATaGTGGGGGTGCTGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PAGAETVPDNGRKDTYRDWYPPG*WGCWGS Trigger: ACTGCCCCAGCACCCCCATCATCCTGGTGGGTACCA...GTCACGGTAAGTGTCCTTTCTACCATTATCAGGGACAGTTTCTGCCCCAGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR CCA 90 bp | AGTGTGTTGGGAGAAGGACGTGGAAGCTCAGACAGTGCCACGGTCTTGACCATAGCTTCTGCTGTCGTGTaGGCTGTGGGCAGAGGACTG | + |
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Preference number: 4 (lower is better) Translates to: SVLGEGRGSSDSATVLTIASAVV*AVGRGL Trigger: CAGTCCTCTGCCCACAGCCCACACGACAGCAGAAGC...TATGGTCAAGACCGTGGCACTGTCTGAGCTTCCACGTCCTTCTCCCAACACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR CCA 90 bp | CAGAGTGACCTTTCCTTAGAGCTTGCCTGGGGCAGACATCACCTGAACTTGACCCTGAATCAATATCCTTaGCCAGTGCCAGGCCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: QSDLSLELAWGRHHLNLTLNQYP*PVPGPA Trigger: CGCAGGGCCTGGCACTGGCCAAGGATATTGATTCAG...GGTCAAGTTCAGGTGATGTCTGCCCCAGGCAAGCTCTAAGGAAAGGTCACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CAA 72 bp | TCCTTAGAGCTTGCCTGGGGCAGACATCACCTGAACTaGACCTCGGAGGATCAAGTCCCAAGAATCAATGGC | + |
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Preference number: 4 (lower is better) Translates to: SLELAWGRHHLN*TSEDQVPRING Trigger: GCCATTGATTCTTGGGACTTGATCCTCCGAGGTCAAGTTCAGGTGATGTCTGCCCCAGGCAAGCTCTAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR GCA 90 bp | TTCTGTGTAAGCAAGAGAGCTGTATTTTCCATTTGCTATGGATCGGGTCCTGACAATATCCTTGGCCAGTaGCAGGCCCTGCGGGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: FCVSKRAVFSICYGSGPDNILGQ*QALRVG Trigger: ACCTACCCGCAGGGCCTGGCACTGGCCAAGGATATT...GTCAGGACCCGATCCATAGCAAATGGAAAATACAGCTCTCTTGCTTACACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR GCA 90 bp | CTAAAGAATTTATTCCCCCAACGCCACACACACCCATTCTATACCCCAGCTCCCGCCTCGCTGGGTGAGTaGAGAACATTCCAAGTACTT | + |
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Preference number: 4 (lower is better) Translates to: LKNLFPQRHTHPFYTPAPASLGE*RTFQVL Trigger: AAGTACTTGGAATGTTCTGCACTCACCCAGCGAGGC...GGGAGCTGGGGTATAGAATGGGTGTGTGTGGCGTTGGGGGAATAAATTCTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR TCA 90 bp | CCAGCTGGGGCAGAAACTGTCCCTGATAATGGTAGAAAGGACACTTACCGTGACCTAGCGAGAAGCAGATaGGAAATACATCTGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PAGAETVPDNGRKDTYRDLARSR*EIHLSV Trigger: CACAGACAGATGTATTTCTCATCTGCTTCTCGCTAG...GTCACGGTAAGTGTCCTTTCTACCATTATCAGGGACAGTTTCTGCCCCAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR TCA 90 bp | CCAGCTGGGGCAGAAACTGTCCCTGATAATGGTAGAAAGGACACTTACCGTGACAACATTCCAAGTACTTaGCTGAATCAATATCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PAGAETVPDNGRKDTYRDNIPST*LNQYPW Trigger: CCAAGGATATTGATTCAGTCAAGTACTTGGAATGTT...GTCACGGTAAGTGTCCTTTCTACCATTATCAGGGACAGTTTCTGCCCCAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| 3UTR CAA 72 bp | CTTGGCTGGGCAGATGAGAGATTTACTGAAGTAGATTaGTTCTGTGCTTTTCTGAAAAAGGAGAACAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LGWADERFTEVD*FCAFLKKENRG Trigger: TCCTCTGTTCTCCTTTTTCAGAAAAGCACAGAACAAATCTACTTCAGTAAATCTCTCATCTGCCCAGCCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR CAA 90 bp | TGGATGGCTGCATCTTGGGGGTCCCTGATGGCCCCTGGGAACATAGGAGCCTCCTCGCGAAGGTCCAGCTaGGTACCCACCAGGATGATG | + |
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Preference number: 5 (lower is better) Translates to: WMAASWGSLMAPGNIGASSRRSS*VPTRMM Trigger: CATCATCCTGGTGGGTACCAAGCTGGACCTTCGCGA...GGAGGCTCCTATGTTCCCAGGGGCCATCAGGGACCCCCAAGATGCAGCCATCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR CAA 90 bp | GTAGGTAGGACTGTCTCAGGCCCAGGCCCTGGGTGCCTGATATGGACACCACATACTGAATCAATATCCTaGGCCAGTGCCAGGCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: VGRTVSGPGPGCLIWTPHTESIS*ASARPC Trigger: GCAGGGCCTGGCACTGGCCAAGGATATTGATTCAGT...ATGTGGTGTCCATATCAGGCACCCAGGGCCTGGGCCTGAGACAGTCCTACCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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| CDS-3UTR CAA 90 bp | GCCATCAAAAGTGTGTTGGGAGAAGGACGTGGAAGCTCAGACAGTGCCACGGTCTTCTCGATGGTGTCCTaGTCATCGCGAAGGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: AIKSVLGEGRGSSDSATVFSMVS*SSRRSS Trigger: GCTGGACCTTCGCGATGACAAGGACACCATCGAGAA...GACCGTGGCACTGTCTGAGCTTCCACGTCCTTCTCCCAACACACTTTTGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043214.8 |
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