Pregenerated sensors for RABL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015087Ensembl transcript IDs: ENSMUST00000058137.9
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCCATGCTGTGGCTCTGGGAGAGCCCCGGAAGGCAAGCAGGAGTaGGGCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCC | + |
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Preference number: 1 (lower is better) Translates to: KPCCGSGRAPEGKQE*GWVVGIREAKQPHA Trigger: GGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGCCCCACTCCTGCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR CCA 90 bp | CACCTGCGCAGGCGCTCAGCGGGCAGAGGCGCAGCTGGCACACAGTaGCAGCCCGTTAGTGCCTCTCCCACAGGAGAAGTGGTACATTGT | + |
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Preference number: 1 (lower is better) Translates to: HLRRRSAGRGAAGTQ*QPVSASPTGEVVHC Trigger: ACAATGTACCACTTCTCCTGTGGGAGAGGCACTAACGGGCTGCCACTGTGTGCCAGCTGCGCCTCTGCCCGCTGAGCGCCTGCGCAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR CCA 90 bp | GACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATaGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: DTSVLRAGPCATLDP*GRRSTTQAMLWLWE Trigger: CTCCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR TCA 90 bp | CCACTTTGCAGTAGCAGATGCTGCCATGCCCTCCTGAGTGACACATaGCACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCC | + |
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Preference number: 1 (lower is better) Translates to: PLCSSRCCHALLSDT*HICAQGRTLCHSGS Trigger: GGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATGTGTCACTCAGGAGGGCATGGCAGCATCTGCTACTGCAAAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR GCA 90 bp | CCGTTAGTGCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTaGCAGGCTTACCCAGTGCGGGGCCTGGGCCACTTTGCAGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: PLVPLPQEKWYIVFS*QAYPVRGLGHFAVA Trigger: TGCTACTGCAAAGTGGCCCAGGCCCCGCACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGCACTAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAGGTGATCCACCAAGCCAGCTGCAACTTTATTCTGTCCCCTCCCTCCCTAGGCTTCTGCTGGGTTaGGGCCCAGCACCTGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: RPGDPPSQLQLYSVPSLPRLLLG*GPAPAA Trigger: CGCTGCAGGTGCTGGGCCTCAACCCAGCAGAAGCCT...AGGGAGGGAGGGGACAGAATAAAGTTGCAGCTGGCTTGGTGGATCACCTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGTGTCCCCTCCCTCCCTaGAGAGCAGGCTTCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LWIHGEEGPQPKPCCGSGCPLPP*RAGFCW Trigger: CCAGCAGAAGCCTGCTCTGCAGGGAGGGAGGGGACA...CCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTCTGTAAAACACCGGGGACTGGTTaGAGCTCTTTCTGGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: AGWWALEKPSSPTPCLCKTPGTG*SSFWEA Trigger: GGCCTCCCAGAAAGAGCTGCAACCAGTCCCCGGTGT...TTTACAGAGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCCCGTTAGTGCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCCAGCCTCCCAGCCACTaGCAGCCCACCTCTTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GSPLVPLPQEKWYIVFSCQPPSH*QPTSSQ Trigger: CTGGGAAGAGGTGGGCTGCCAGTGGCTGGGAGGCTG...GCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGCACTAACGGGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR CCA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGAGCTGGGGGACATAGGTaGCAGGGTGGTCCTGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: HDTSVLRAGPCATLDPWGAGGHR*QGGPGN Trigger: ATTCCCAGGACCACCCTGCCACCTATGTCCCCCAGC...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR CCA 90 bp | CAACCCAAGCCATGCTGTGGCTCTGGGAGAGCCCCGGAAGGCAAGCAGGAGTGGAGAAACACCGGGGACTaGTTGCAGCTCTTTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: QPKPCCGSGRAPEGKQEWRNTGD*LQLFLG Trigger: TCCCAGAAAGAGCTGCAACCAGTCCCCGGTGTTTCT...CCACTCCTGCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTTGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR CAA 90 bp | CCCGTTAGTGCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTaGCCAGGCTTACCCAGTGCGGGGCCTGGGCCACTTTGCAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: PVSASPTGEVVHCVL*PGLPSAGPGPLCSS Trigger: GCTACTGCAAAGTGGCCCAGGCCCCGCACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGCACTAACGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGTGCAGAGCAGGCTTCTaGTGGGTTGAGGCCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: CATLDPWGRRSTTQAMLWCRAGF*WVEAQH Trigger: GTGCTGGGCCTCAACCCAGCAGAAGCCTGCTCTGCA...CCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTGAAGGCAAGCAGGAGTaGGGCTGGGTGGTGGGCATT | + |
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Preference number: 2 (lower is better) Translates to: CHSGSMGKKVHNPSHAVAEGKQE*GWVVGI Trigger: AATGCCCACCACCCAGCCCCACTCCTGCTTGCCTTC...AGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCCAGGCTTACCCAGTCAGGGCAGGACCCTGTaGCACTCTGGATCCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: ASPTGEVVHCVLLPGLPSQGRTL*HSGSMG Trigger: CCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTG...ACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR CCA 90 bp | CATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGAAGAAGGTAAGCAGGAGTGGGGCTaGGTGGTGGGCATTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: HLCSGQDPVPLWIHGEEGKQEWG*VVGIRE Trigger: TTCTCTAATGCCCACCACCCAGCCCCACTCCTGCTT...ACCTTCTTCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCCAGGCTTACCCAGTGCCATGCTGTGGCTCTaGGAGAGCCCCGGAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: ASPTGEVVHCVLLPGLPSAMLWL*ESPGRQ Trigger: TTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGC...ACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCCAGGCTTACCCAGTAGCAGCCCCACGCCCTaGCTCTGTAAACAGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: ASPTGEVVHCVLLPGLPSSSPTP*LCKQTL Trigger: CAGGGTCTGTTTACAGAGGCAGGGCGTGGGGCTGCT...ACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCCCGTTAGTGCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCGTGGCAGGGTGGTCCTaGGAATGTGGGTGCATAGAC | + |
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Preference number: 2 (lower is better) Translates to: GSPLVPLPQEKWYIVFSCVAGWS*ECGCID Trigger: GTCTATGCACCCACATTCCCAGGACCACCCTGCCAC...GCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGCACTAACGGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTCTGTAAAAAAAACAATGTAGAGTaGGCCAGACCACATGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: AGWWALEKPSSPTPCLCKKNNVE*ARPHGG Trigger: GCCCCCATGTGGTCTGGCCCACTCTACATTGTTTTT...TTTACAGAGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGC 57% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCCAGGCTTACCCAGTCCTGACCCAAGGGCCTaGACACCACCAAGGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: ASPTGEVVHCVLLPGLPSPDPRA*TPPRSS Trigger: AGAAGACCTTGGTGGTGTTCAGGCCCTTGGGTCAGG...ACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCCAGGCTTACCCAGTTGCAGTAGCAGATGCTaGCATGCCCTCCTGAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: ASPTGEVVHCVLLPGLPSCSSRC*HALLSD Trigger: GTCACTCAGGAGGGCATGGCAGCATCTGCTACTGCA...ACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR GCA 72 bp | TCTGGAGTGTCTAAGAAGGTGCCCTCTGGGCTCACCTaGGCAGGCGCTCAGCGGGCAGAGGCGCAGCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: SGVSKKVPSGLT*AGAQRAEAQLA Trigger: TGCCAGCTGCGCCTCTGCCCGCTGAGCGCCTGCGCAGGTGAGCCCAGAGGGCACCTTCTTAGACACTCCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR CCA 72 bp | TGTGGCTCTGGGAGAGCCCCGGAAGGCAAGCAGGAGTaGGGCTGGGTGGTGGGCATTAGAGAAGCCAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: CGSGRAPEGKQE*GWVVGIREAKQ Trigger: CTGCTTGGCTTCTCTAATGCCCACCACCCAGCCCCACTCCTGCTTGCCTTCCGGGGCTCTCCCAGAGCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR CCA 72 bp | GGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTaGGAGAGCCCCGGAAGGCAAGCAGGAGTGGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GRRSTTQAMLWL*ESPGRQAGVGL Trigger: CAGCCCCACTCCTGCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR CCA 72 bp | CCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTaGCTCTGGGAGAGCCCCGGAAGGCAAGCAGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: PWGRRSTTQAML*LWESPGRQAGV Trigger: CACTCCTGCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR-3UTR CAA 90 bp | GCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTCTGTAAAAACACCGGGGACTGGTaGCAGCTCTTTCTGGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: AGWWALEKPSSPTPCLCKNTGDW*QLFLGG Trigger: GCCTCCCAGAAAGAGCTGCAACCAGTCCCCGGTGTT...TTTACAGAGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR GCA 72 bp | TGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATaGTGTGGCTCTGGGAGAGCCCCGGAAGGCAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: WIHGEEGPQPKP*CGSGRAPEGKQ Trigger: CTGCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR CCA 72 bp | GTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATaGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: VLRAGPCATLDP*GRRSTTQAMLW Trigger: CCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR TCA 72 bp | AGTAGCAGATGCTGCCATGCCCTCCTGAGTGACACATaGCACATCTGTGCTCAGGGCAGGACCCTGTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: SSRCCHALLSDT*HICAQGRTLCH Trigger: GTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATGTGTCACTCAGGAGGGCATGGCAGCATCTGCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR GCA 72 bp | CTCTTTCTGGGAGGCCAGGTGATCCACCAAGCCAGCTaGAACTTTATTCTGTCCCCTCCCTCCCTGCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: LFLGGQVIHQAS*NFILSPPSLQS Trigger: GCTCTGCAGGGAGGGAGGGGACAGAATAAAGTTGCAGCTGGCTTGGTGGATCACCTGGCCTCCCAGAAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR GCA 72 bp | CCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTaGCAGGCTTACCCAGTGCGGGGCCTGGGCCACTTT | + |
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Preference number: 3 (lower is better) Translates to: PLPQEKWYIVFS*QAYPVRGLGHF Trigger: AAAGTGGCCCAGGCCCCGCACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR TCA 72 bp | GGCCACTTTGCAGTAGCAGATGCTGCCATGCCCTCCTaGGTGACACATGACACATCTGTGCTCAGGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: GHFAVADAAMPS*VTHDTSVLRAG Trigger: TCCTGCCCTGAGCACAGATGTGTCATGTGTCACTCAGGAGGGCATGGCAGCATCTGCTACTGCAAAGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR CCA 72 bp | AGTGGCAGCCCGTTAGTGCCTCTCCCACAGGAGAAGTaGTACATTGTGTTCTCTTGCCAGGCTTACCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SGSPLVPLPQEK*YIVFSCQAYPV Trigger: CACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGCACTAACGGGCTGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | GAGTGGGGCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTGGCTCTGAGCATTGCTaGGGGGCCACTCTAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: EWGWVVGIREAKQPHALPGSEHC*GATLGW Trigger: CCACCCTAGAGTGGCCCCTCAGCAATGCTCAGAGCC...AGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGCCCCACTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | TGGTCCTGGGAATGTGGGTGCATAGACAGCAGCCTCCCAGCCACTGGCAGCCCAGCAGCGCCTGGTTCATaGACTGCAGCCCGGCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: WSWECGCIDSSLPATGSPAAPGS*TAARRG Trigger: TCCCCGCCGGGCTGCAGTCCATGAACCAGGCGCTGC...TGGGCTGCCAGTGGCTGGGAGGCTGCTGTCTATGCACCCACATTCCCAGGACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | GCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTCTGTAAAGAAGGTGGAGGTGGCTaGGCAGGGCCAGTGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: AGWWALEKPSSPTPCLCKEGGGG*AGPVSS Trigger: TGAGGACACTGGCCCTGCTCAGCCACCTCCACCTTC...TTTACAGAGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | TGGTCCTGGGAATGTGGGTGCATAGACAGCAGCCTCCCAGCCACTGGCAGCCCAGCCACAGAGCTGTCTTaGCCGTGTTCCTGTCACCCC | + |
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Preference number: 4 (lower is better) Translates to: WSWECGCIDSSLPATGSPATELS*PCSCHP Trigger: GGGGTGACAGGAACACGGGCAAGACAGCTCTGTGGC...TGGGCTGCCAGTGGCTGGGAGGCTGCTGTCTATGCACCCACATTCCCAGGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | AAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGAGAGCCCCGGAAGGCAAGCATGATACTGCGACGCTaGGCTGGAGCTGGGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KVHNPSHAVALGEPRKASMILRR*AGAGAG Trigger: TCCAGCCCCAGCTCCAGCCCAGCGTCGCAGTATCAT...GCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | AAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGAGAGCCCCGGAAGGCAAGCCTTGGAAGGTGGAGGTaGCTGAGCAGGGCCAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: KVHNPSHAVALGEPRKASLGRWR*LSRASV Trigger: GACACTGGCCCTGCTCAGCCACCTCCACCTTCCAAG...GCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | GCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTCTGTAAAAGCTGGCTCTGGAGGTaGAGGGGTCACTTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AGWWALEKPSSPTPCLCKSWLWR*RGHFCS Trigger: GCTGCAGAAGTGACCCCTTCACCTCCAGAGCCAGCT...TTTACAGAGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGAGCCTGGTTCATGGACTaGAGCCCGGCGGGGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: HDTSVLRAGPCATLDPWGAWFMD*SPAGMF Trigger: GAACATCCCCGCCGGGCTGCAGTCCATGAACCAGGC...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | TGTGCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCGCCTCTGCAGCGCCTaGTTCATGGACTGCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: CATLDPWGRRSTTQAMLWRLCSA*FMDCSP Trigger: CGGGCTGCAGTCCATGAACCAGGCGCTGCAGAGGCG...CCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | CTCCCAGCCACTGGCAGCCCACCTCTTCCCAGACAATCAATTGCCCTAGGCATGTGGGAGCTTGGAAGGTaGAGGTGGCTGAGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPATGSPPLPRQSIALGMWELGR*RWLSRA Trigger: GGCCCTGCTCAGCCACCTCCACCTTCCAAGCTCCCA...CATGCCTAGGGCAATTGATTGTCTGGGAAGAGGTGGGCTGCCAGTGGCTGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | TGTGCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGACACCTAGAGACAGCTaGGGGGCAGGCTGGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: CATLDPWGRRSTTQAMLWTPRDS*GAGWGV Trigger: CACACCCCAGCCTGCCCCTCAGCTGTCTCTAGGTGT...CCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | ACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGGTTGGGGCTGGGGCTaGAGAGTGTACAGAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TLDPWGRRSTTQAMLWLWGWGWG*RVYRGG Trigger: CCCTCCTCTGTACACTCTTCAGCCCCAGCCCCAACC...CCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | CAACCCAAGCCATGCTGTGGCTCTGGGAGAGCCCCGGAAGGCAAGCAGGAGTGGGGCCAATTCAGACTCTaGCTCCTGGGGGTCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: QPKPCCGSGRAPEGKQEWGQFRL*LLGVIF Trigger: GAAAATGACCCCCAGGAGGCAGAGTCTGAATTGGCC...CCACTCCTGCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTTGGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGACCTGAGGATGGGCTCTaGCCATTGGCTGCCAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: HDTSVLRAGPCATLDPWGPEDGL*PLAAKG Trigger: CCCTTTGGCAGCCAATGGGCAGAGCCCATCCTCAGG...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | GCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCCACTCTAGGGTGGCCTaGCAGTCCTTCGGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATLDPWGRRSTTQAMLWLHSRVA*QSFGFL Trigger: GAGGAAGCCGAAGGACTGGCAGGCCACCCTAGAGTG...GAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGACACCGGCACATGGGTTaGCACTTTGGGAAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HDTSVLRAGPCATLDPWGHRHMG*HFGKLP Trigger: CGGGAGCTTCCCAAAGTGCCAACCCATGTGCCGGTG...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| 3UTR CAA 72 bp | GCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTaGCCAGGCTTACCCAGTGCGGGGCCTGGGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ASPTGEVVHCVL*PGLPSAGPGPL Trigger: AAGTGGCCCAGGCCCCGCACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | CATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGAAGAAGGTCACTTCTGCAGCTGGTaGGGTCCCAAACAGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLCSGQDPVPLWIHGEEGHFCSW*GPKQPR Trigger: TCTCGGCTGTTTGGGACCTCACCAGCTGCAGAAGTG...ACCTTCTTCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | CTCCCAGCCACTGGCAGCCCACCTCTTCCCAGACAATCAATTGCCCTAGGCATGTTAGCGAAGCGCCTCTaGAGCGCCTGGTTCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPATGSPPLPRQSIALGMLAKRL*SAWFMD Trigger: GTCCATGAACCAGGCGCTGCAGAGGCGCTTCGCTAA...CATGCCTAGGGCAATTGATTGTCTGGGAAGAGGTGGGCTGCCAGTGGCTGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | CTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGTCATCTGCAGCCTTCTaGTCTTTGCTCCGAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LWIHGEEGPQPKPCCGSGSSAAF*SLLRGG Trigger: GCCCCCTCGGAGCAAAGAGCAGAAGGCTGCAGATGA...CCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | GCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTCTGTAAATGGATGCTGGTGACCTaGATCTCCTGTGTGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AGWWALEKPSSPTPCLCKWMLVT*ISCVGM Trigger: CATCCCCACACAGGAGATCCAGGTCACCAGCATCCA...TTTACAGAGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | GGGCCAGACCACATGGGGGCAGACATAATGGCTGGGGGACATAGGTGGCAGGGTCATGGGTTGGCACTTTaGGAAGCTCCCGGAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GPDHMGADIMAGGHRWQGHGLAL*EAPGEH Trigger: ATGTTCTCCGGGAGCTTCCCAAAGTGCCAACCCATG...ACCCTGCCACCTATGTCCCCCAGCCATTATGTCTGCCCCCATGTGGTCTGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | GCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTCTGTAAACAGTCTGAAAGCACCTaGGAGCTTGGAAGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGWWALEKPSSPTPCLCKQSEST*ELGRWR Trigger: CCTCCACCTTCCAAGCTCCCAGGTGCTTTCAGACTG...TTTACAGAGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | TGGTCCTGGGAATGTGGGTGCATAGACAGCAGCCTCCCAGCCACTGGCAGCCCACTTCTTTTGTGGATGTaGGACCTTGGTGGAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: WSWECGCIDSSLPATGSPLLLWM*DLGGGP Trigger: TGGTCCTCCACCAAGGTCTCACATCCACAAAAGAAG...TGGGCTGCCAGTGGCTGGGAGGCTGCTGTCTATGCACCCACATTCCCAGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | TGTGCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGTTGCCCTGCAGTCGATaGCACAGAGCTGTCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CATLDPWGRRSTTQAMLWLPCSR*HRAVLP Trigger: GGGCAAGACAGCTCTGTGGCATCGACTGCAGGGCAA...CCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | GCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCCAGGCTTACCCAGTCTGACCACGGTGGCGTaGCTCTCGTGGGAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPTGEVVHCVLLPGLPSLTTVA*LSWELS Trigger: AGAGAGCTCCCACGAGAGGCACGCCACCGTGGTCAG...ACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | CTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGTCTTCCGATCCTCCTTaGCCTCCTCCTTGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWIHGEEGPQPKPCCGSGSSDPP*PPPCPC Trigger: GCAAGGACAAGGAGGAGGGCAAGGAGGATCGGAAGA...CCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | CTCCCAGCCACTGGCAGCCCACCTCTTCCCAGACAATCAATTGCCCTAGGCATGGTGCTGAGGGACAGGTaGAGGAGACACCTAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LPATGSPPLPRQSIALGMVLRDR*RRHLET Trigger: TGTCTCTAGGTGTCTCCTCCACCTGTCCCTCAGCAC...CATGCCTAGGGCAATTGATTGTCTGGGAAGAGGTGGGCTGCCAGTGGCTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | ACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGTCCAATGGATGCTGGTaGCCTGGATCTCCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLDPWGRRSTTQAMLWLWSNGCW*PGSPVW Trigger: CCACACAGGAGATCCAGGTCACCAGCATCCATTGGA...CCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGACATCGTCTGGTAGAATaGCTCGATGCTCGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HDTSVLRAGPCATLDPWGHRLVE*LDARPC Trigger: ACATGGGCGAGCATCGAGTCATTCTACCAGACGATG...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | GCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGTTTGTCTCCAGCTaGCTCAGTAGTGTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATLDPWGRRSTTQAMLWLWFVSS*LSSVSL Trigger: GAGGGAGACACTACTGAGGCAGCTGGAGACAAACCA...GAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | GCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGTCCTCGGTTTCCTaGTGCACTGATAGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATLDPWGRRSTTQAMLWLWSSVS*CTDSSS Trigger: AGAGGAGCTATCAGTGCAGCAGGAAACCGAGGACCA...GAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGAGGCTTCCAGCTCATCTaGAGCCTTCTGCTCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HDTSVLRAGPCATLDPWGGFQLI*SLLLFA Trigger: AGCAAAGAGCAGAAGGCTGCAGATGAGCTGGAAGCC...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | GCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCCAGGCTTACCCAGTGGGGTGTGCTGGGGCTaGAACTCCCTGTGGATACAG | + |
|
Preference number: 4 (lower is better) Translates to: ASPTGEVVHCVLLPGLPSGVCWG*NSLWIQ Trigger: CTGTATCCACAGGGAGTTCCAGCCCCAGCACACCCC...ACTGGGTAAGCCTGGCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | TGCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTGTACAGAGGAGGGCATaGCCTCCAAAGAGGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: CHSGSMGKKVHNPSHAVAVQRRA*PPKRVQ Trigger: CTGTACCCTCTTTGGAGGCCATGCCCTCCTCTGTAC...AGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | CTCCCAGCCACTGGCAGCCCACCTCTTCCCAGACAATCAATTGCCCTAGGCATGATTCTGGACTCTTGCTaGAGCTTCGAGAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPATGSPPLPRQSIALGMILDSC*SFESWS Trigger: GCTCCAGCTCTCGAAGCTCCAGCAAGAGTCCAGAAT...CATGCCTAGGGCAATTGATTGTCTGGGAAGAGGTGGGCTGCCAGTGGCTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | CTCCCAGCCACTGGCAGCCCACCTCTTCCCAGACAATCAATTGCCCTAGGCATGCTGTCACTATCCTGCTaGGGACCTTTGGCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LPATGSPPLPRQSIALGMLSLSC*GPLAPT Trigger: AGTTGGAGCCAAAGGTCCCCAGCAGGATAGTGACAG...CATGCCTAGGGCAATTGATTGTCTGGGAAGAGGTGGGCTGCCAGTGGCTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | GGCAGCCCGTTAGTGCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCTTTAGTCTCAGGCTCTaGGCATTGCTGAGGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSPLVPLPQEKWYIVFSCFSLRL*ALLRGH Trigger: GTGGCCCCTCAGCAATGCTCAGAGCCTGAGACTAAA...GCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGCACTAACGGGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | CATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGAAGAAGGTACAAACTTCTTGCCCTaGAGTCGATGCCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLCSGQDPVPLWIHGEEGTNFLP*SRCHRA Trigger: AGCTCTGTGGCATCGACTGCAGGGCAAGAAGTTTGT...ACCTTCTTCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | CTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGAGGGCAGCAGGGATTTaGCATGTGTCTGGTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LWIHGEEGPQPKPCCGSGRAAGI*HVSGLL Trigger: TAGAAGACCAGACACATGGCAAATCCCTGCTGCCCT...CCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | GGCAGCCCGTTAGTGCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCACACACACCGGCACATaGGTTGGCACTTTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPLVPLPQEKWYIVFSCTHTGT*VGTLGS Trigger: GCTTCCCAAAGTGCCAACCCATGTGCCGGTGTGTGT...GCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGCACTAACGGGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | CTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGGAAATAGGAGGAACCTaGAGGTCTGTCCAGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWIHGEEGPQPKPCCGSGEIGGT*RSVQML Trigger: GAGCATCTGGACAGACCTCCAGGTTCCTCCTATTTC...CCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | CTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGGCATCGATGTCTAGTTaGTTTGTCTCCAGCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWIHGEEGPQPKPCCGSGASMSS*FVSSCL Trigger: GAGGCAGCTGGAGACAAACCAACTAGACATCGATGC...CCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGAGGCTTCCTCCTCACTTaGGAGACTGATGTTCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: HDTSVLRAGPCATLDPWGGFLLT*ETDVLT Trigger: AGTAAGAACATCAGTCTCTCAAGTGAGGAGGAAGCC...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | GGGCCAGACCACATGGGGGCAGACATAATGGCTGGGGGACATAGGTGGCAGGGTGTCTCCCTCTGTAGTTaGAAAAATGGGATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPDHMGADIMAGGHRWQGVSLCS*KNGMLK Trigger: CTTCAACATCCCATTTTTGCAACTACAGAGGGAGAC...ACCCTGCCACCTATGTCCCCCAGCCATTATGTCTGCCCCCATGTGGTCTGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | GGCAGCCCGTTAGTGCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCTCAGACTCTGCCTCCTaGGGGTCATTTTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPLVPLPQEKWYIVFSCSDSAS*GSFSVF Trigger: GAAGACGGAAAATGACCCCCAGGAGGCAGAGTCTGA...GCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGCACTAACGGGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | GCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTCTGTAAAAAATCCTCAACATTCTaGACTCTTGCTGGAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AGWWALEKPSSPTPCLCKKSSTF*TLAGAS Trigger: CGAAGCTCCAGCAAGAGTCCAGAATGTTGAGGATTT...TTTACAGAGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGTGATCCACCAAGCCAGCTGCAACTTTATTCTGTCCCCTCCCTCCCTCCTGCTGGGGACCTTTaGCTCCAACTTTCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPGDPPSQLQLYSVPSLPPAGDL*LQLSCL Trigger: AAGACAAGAAAGTTGGAGCCAAAGGTCCCCAGCAGG...AGGGAGGGAGGGGACAGAATAAAGTTGCAGCTGGCTTGGTGGATCACCTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | CTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGTTGTCCTTCCCTTCCTaGGGTCTTTCAGAGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LWIHGEEGPQPKPCCGSGLSFPS*GLSESS Trigger: TGATGACTCTGAAAGACCCCAGGAAGGGAAGGACAA...CCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGACTCTTACTGGAAACCTaGCCATTCTCCTCTGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HDTSVLRAGPCATLDPWGLLLET*PFSSVY Trigger: ATACACAGAGGAGAATGGGCAGGTTTCCAGTAAGAG...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | TGTGCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCCTGGATCTCCTGTGTaGGGATGTATTCTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CATLDPWGRRSTTQAMLWPGSPV*GCILPQ Trigger: TTGTGGAAGAATACATCCCCACACAGGAGATCCAGG...CCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CCA 90 bp | CATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGAAGAAGGTGATTTGCCATGTGTCTaGTCTTCTATGTCCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: HLCSGQDPVPLWIHGEEGDLPCV*SSMSTS Trigger: TGATGTGGACATAGAAGACCAGACACATGGCAAATC...ACCTTCTTCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR TCA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGAGCAAAAATGGGATGTTaGAGAACTTATGCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HDTSVLRAGPCATLDPWGAKMGC*RTYAGT Trigger: AGTACCTGCATAAGTTCTTCAACATCCCATTTTTGC...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR GCA 90 bp | GGGCCAGACCACATGGGGGCAGACATAATGGCTGGGGGACATAGGTGGCAGGGTATGTTGAAGAACTTATaGAGGTACTTTAGACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPDHMGADIMAGGHRWQGMLKNL*RYFRPK Trigger: CTTTGGTCTAAAGTACCTGCATAAGTTCTTCAACAT...ACCCTGCCACCTATGTCCCCCAGCCATTATGTCTGCCCCCATGTGGTCTGGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCAAAGCTGTTCTTCATaGAAGATTCAGCATAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CATLDPWGRRSTTQAMLWQSCSS*KIQHSG Trigger: TCCGCTATGCTGAATCTTCCATGAAGAACAGCTTTG...CCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS-3UTR TCA 90 bp | ACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGTCTCCTCTGTGTATCTaGTTCATCACTTTCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLDPWGRRSTTQAMLWLWSPLCI*FITFKV Trigger: GACTTTGAAAGTGATGAATCAGATACACAGAGGAGA...CCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGCCACTGGCAGCCCACCTCTTCCCAGACAATCAATTGCCCTAGGCATGGCAGCCTTCTGCTCTTaGCTCCGAGGGGGCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPATGSPPLPRQSIALGMAAFCS*LRGGFL Trigger: GAGGAAGCCCCCTCGGAGCAAAGAGCAGAAGGCTGC...CATGCCTAGGGCAATTGATTGTCTGGGAAGAGGTGGGCTGCCAGTGGCTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGCCACTGGCAGCCCACCTCTTCCCAGACAATCAATTGCCCTAGGCATGTGCCACAGAGCTGTCTaGCCCGTGTTCCTGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LPATGSPPLPRQSIALGMCHRAV*PVFLSP Trigger: GGGTGACAGGAACACGGGCAAGACAGCTCTGTGGCA...CATGCCTAGGGCAATTGATTGTCTGGGAAGAGGTGGGCTGCCAGTGGCTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS-3UTR CAA 90 bp | CAACCCAAGCCATGCTGTGGCTCTGGGAGAGCCCCGGAAGGCAAGCAGGAGTGGCAACATTCTGGACTCTaGCTGGAGCTTCGAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPKPCCGSGRAPEGKQEWQHSGL*LELREL Trigger: CAGCTCTCGAAGCTCCAGCAAGAGTCCAGAATGTTG...CCACTCCTGCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTTGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | GAGTGGGGCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTTGTGGATGTGAGACCTaGGTGGAGGACCATTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EWGWVVGIREAKQPHALPCGCET*VEDHLV Trigger: GACTAAATGGTCCTCCACCAAGGTCTCACATCCACA...AGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGCCCCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 90 bp | GCCCAGCCCAAAGAGATCGGAGTCATTCTTCAGTCTGAAAGCACCTaGGAGCTTGGAAGGTGGAGGTGGCTGAGCAGGGCCAGTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQPKEIGVILQSEST*ELGRWRWLSRASVL Trigger: GAGGACACTGGCCCTGCTCAGCCACCTCCACCTTCCAAGCTCCCAGGTGCTTTCAGACTGAAGAATGACTCCGATCTCTTTGGGCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | AAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGAGAGCCCCGGAAGGCAAGCTCTGATGACACCTGTTaGTCCTTCCCTTCCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KVHNPSHAVALGEPRKASSDDTC*SFPSWG Trigger: ACCCCAGGAAGGGAAGGACAAACAGGTGTCATCAGA...GCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | AAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGAGAGCCCCGGAAGGCAAGCTCCTTGCCCTCCTCCTaGTCCTTGCTCTTCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KVHNPSHAVALGEPRKASSLPSS*SLLFLC Trigger: ACACAAGAAGAGCAAGGACAAGGAGGAGGGCAAGGA...GCTTGCCTTCCGGGGCTCTCCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS TCA 90 bp | TCTCCTCTAGGCCCAGCCCAAAGAGATCGGAGTCATTCTTCAGTCTaGAAGCACCTGGGAGCTTGGAAGGTGGAGGTGGCTGAGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLGPAQRDRSHSSV*KHLGAWKVEVAEQG Trigger: GCCCTGCTCAGCCACCTCCACCTTCCAAGCTCCCAGGTGCTTTCAGACTGAAGAATGACTCCGATCTCTTTGGGCTGGGCCTAGAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGAACATGGGTTGGCACTTaGGGAAGCTCCCGGAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: HDTSVLRAGPCATLDPWGTWVGT*GSSRRT Trigger: TGTTCTCCGGGAGCTTCCCAAAGTGCCAACCCATGT...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | GGCAGCCCGTTAGTGCCTCTCCCACAGGAGAAGTGGTACATTGTGTTCTCTTGCACACCGGCACATGGGTaGGCACTTTGGGAAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSPLVPLPQEKWYIVFSCTPAHG*ALWEAP Trigger: GGGAGCTTCCCAAAGTGCCAACCCATGTGCCGGTGT...GCAAGAGAACACAATGTACCACTTCTCCTGTGGGAGAGGCACTAACGGGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 90 bp | GCCCATGTCACGGTAGTTGCCCAGCACACACACCGGCACATGGGTTaGCACTTTGGGAAGCTCCCGGAGAACATAATTGAAGGTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: AHVTVVAQHTHRHMG*HFGKLPENIIEGPL Trigger: CAGTGGACCTTCAATTATGTTCTCCGGGAGCTTCCCAAAGTGCCAACCCATGTGCCGGTGTGTGTGCTGGGCAACTACCGTGACATGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | CTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCTGGGTCTTCCACAAACTTCTaGCCCTGCAGTCGATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LWIHGEEGPQPKPCCGSGSSTNF*PCSRCH Trigger: GTGGCATCGACTGCAGGGCAAGAAGTTTGTGGAAGA...CCCAGAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | TGTGCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGTTCTTCCGATCCTCCTaGCCCTCCTCCTTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CATLDPWGRRSTTQAMLWFFRSS*PSSLSL Trigger: CAAGGACAAGGAGGAGGGCAAGGAGGATCGGAAGAA...CCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS CCA 90 bp | GGGTTCCCTCCTAGGGCCTCCCCATCGTCACTGTCACTATCCTGCTaGGGACCTTTGGCTCCAACTTTCTTGTCTTTAGGCACACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFPPRASPSSLSLSC*GPLAPTFLSLGTLV Trigger: CACAAGTGTGCCTAAAGACAAGAAAGTTGGAGCCAAAGGTCCCCAGCAGGATAGTGACAGTGACGATGGGGAGGCCCTAGGAGGGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS GCA 90 bp | TGTGTGGGGATGTATTCTTCCACAAACTTCTTGCCCTGCAGTCGATaGCACAGAGCTGTCTTGCCCGTGTTCCTGTCACCCCGGATCACA | + |
|
Preference number: 5 (lower is better) Translates to: CVGMYSSTNFLPCSR*HRAVLPVFLSPRIT Trigger: TGTGATCCGGGGTGACAGGAACACGGGCAAGACAGCTCTGTGGCATCGACTGCAGGGCAAGAAGTTTGTGGAAGAATACATCCCCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS CCA 90 bp | GTCATTCTTCAGTCTGAAAGCACCTGGGAGCTTGGAAGGTGGAGGTaGCTGAGCAGGGCCAGTGTCCTCATCAGTTACATCAGAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VILQSESTWELGRWR*LSRASVLISYIREV Trigger: GACCTCTCTGATGTAACTGATGAGGACACTGGCCCTGCTCAGCCACCTCCACCTTCCAAGCTCCCAGGTGCTTTCAGACTGAAGAATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | GAGTGGGGCTGGGTGGTGGGCATTAGAGAAGCCAAGCAGCCCCACGCCCTGCCTTTTTTACACTTTCCTTaGTCAACTACATCCCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: EWGWVVGIREAKQPHALPFLHFP*STTSQT Trigger: AGTCTGGGATGTAGTTGACAAAGGAAAGTGTAAAAA...AGGCAGGGCGTGGGGCTGCTTGGCTTCTCTAATGCCCACCACCCAGCCCCACTC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | TGTGCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCGATGTCTAGTTGGTTaGTCTCCAGCTGCCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CATLDPWGRRSTTQAMLWRCLVG*SPAASV Trigger: TACTGAGGCAGCTGGAGACAAACCAACTAGACATCG...CCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS TCA 90 bp | TTCTTCAGTCTGAAAGCACCTGGGAGCTTGGAAGGTGGAGGTGGCTaGGCAGGGCCAGTGTCCTCATCAGTTACATCAGAGAGGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FFSLKAPGSLEGGGG*AGPVSSSVTSERSS Trigger: AGAAGACCTCTCTGATGTAACTGATGAGGACACTGGCCCTGCTCAGCCACCTCCACCTTCCAAGCTCCCAGGTGCTTTCAGACTGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS GCA 90 bp | ATTGGGTTCCCTCCTAGGGCCTCCCCATCGTCACTGTCACTATCCTaGTGGGGACCTTTGGCTCCAACTTTCTTGTCTTTAGGCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: IGFPPRASPSSLSLS*WGPLAPTFLSLGTL Trigger: AAGTGTGCCTAAAGACAAGAAAGTTGGAGCCAAAGGTCCCCAGCAGGATAGTGACAGTGACGATGGGGAGGCCCTAGGAGGGAACCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS CCA 90 bp | CCCTCAGGATCACTCTCTGATGACACCTGTTTGTCCTTCCCTTCCTaGGGTCTTTCAGAGTCATCAGTGGTGAGACCATCTGACCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSGSLSDDTCLSFPS*GLSESSVVRPSDHG Trigger: ACCGTGGTCAGATGGTCTCACCACTGATGACTCTGAAAGACCCCAGGAAGGGAAGGACAAACAGGTGTCATCAGAGAGTGATCCTGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS CCA 90 bp | ATCGGAGTCATTCTTCAGTCTGAAAGCACCTGGGAGCTTGGAAGGTaGAGGTGGCTGAGCAGGGCCAGTGTCCTCATCAGTTACATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IGVILQSESTWELGR*RWLSRASVLISYIR Trigger: TCTGATGTAACTGATGAGGACACTGGCCCTGCTCAGCCACCTCCACCTTCCAAGCTCCCAGGTGCTTTCAGACTGAAGAATGACTCCGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS-3UTR CAA 90 bp | TGGTCCTGGGAATGTGGGTGCATAGACAGCAGCCTCCCAGCCACTGGCAGCCCATGCAAAAATGGGATGTaGAAGAACTTATGCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WSWECGCIDSSLPATGSPCKNGM*KNLCRY Trigger: GTACCTGCATAAGTTCTTCAACATCCCATTTTTGCA...TGGGCTGCCAGTGGCTGGGAGGCTGCTGTCTATGCACCCACATTCCCAGGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | CATGACACATCTGTGCTCAGGGCAGGACCCTGTGCCACTCTGGATCCATGGGGATTGGCTCCAACTTTCTaGTCTTTAGGCACACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HDTSVLRAGPCATLDPWGLAPTF*SLGTLV Trigger: CACAAGTGTGCCTAAAGACAAGAAAGTTGGAGCCAA...TCCCCATGGATCCAGAGTGGCACAGGGTCCTGCCCTGAGCACAGATGTGTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 90 bp | TCCTGCTGCACTGATAGCTCCTCTAGTGTGGCATCGATGTCTAGTTaGTTTGTCTCCAGCTGCCTCAGTAGTGTCTCCCTCTGTAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCCTDSSSSVASMSS*FVSSCLSSVSLCSC Trigger: GCAACTACAGAGGGAGACACTACTGAGGCAGCTGGAGACAAACCAACTAGACATCGATGCCACACTAGAGGAGCTATCAGTGCAGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGGTGATCCACCAAGCCAGCTGCAACTTTATTCTGTCCCCTCCCTCCCTTCCTTAGAGGGAAGTTaGCTGTCTCTATCTTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RPGDPPSQLQLYSVPSLPSLEGS*LSLSSS Trigger: TGACGAAGATAGAGACAGCAAACTTCCCTCTAAGGA...AGGGAGGGAGGGGACAGAATAAAGTTGCAGCTGGCTTGGTGGATCACCTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS GCA 90 bp | GCTCTTTGCTCCGAGGGGGCTTCCTCTTCTTCTTCCGATCCTCCTTaGCCTCCTCCTTGTCCTTGCTCTTCTTGTGTTTGCTTTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALCSEGASSSSSDPP*PPPCPCSSCVCFSF Trigger: AAAAGAAAAGCAAACACAAGAAGAGCAAGGACAAGGAGGAGGGCAAGGAGGATCGGAAGAAGAAGAGGAAGCCCCCTCGGAGCAAAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 90 bp | GCTGTTCTTCATGGAAGATTCAGCATAGCGGAAATAGGAGGAACCTaGAGGTCTGTCCAGATGCTCAATGAAGTCCCGCACATCGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVLHGRFSIAEIGGT*RSVQMLNEVPHIVW Trigger: CCAGACGATGTGCGGGACTTCATTGAGCATCTGGACAGACCTCCAGGTTCCTCCTATTTCCGCTATGCTGAATCTTCCATGAAGAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS-3UTR CAA 90 bp | GCCACTCTGGATCCATGGGGAAGAAGGTCCACAACCCAAGCCATGCTGTGGCTCACTCCATTACAGTTCTaGTACACATCCAGAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ATLDPWGRRSTTQAMLWLTPLQF*YTSRNS Trigger: TGAGTTTCTGGATGTGTACAAGAACTGTAATGGAGT...GAGCCACAGCATGGCTTGGGTTGTGGACCTTCTTCCCCATGGATCCAGAGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS GCA 90 bp | TGTCCTCATCAGTTACATCAGAGAGGTCTTCTCTTACTGGAAACCTaGCCATTCTCCTCTGTGTATCTGATTCATCACTTTCAAAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPHQLHQRGLLLLET*PFSSVYLIHHFQSL Trigger: CAGACTTTGAAAGTGATGAATCAGATACACAGAGGAGAATGGGCAGGTTTCCAGTAAGAGAAGACCTCTCTGATGTAACTGATGAGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS TCA 72 bp | CCTTCCCTTCCTGGGGTCTTTCAGAGTCATCAGTGGTaGGACCATCTGACCACGGTGGCGTGCCTCTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSLPGVFQSHQW*DHLTTVACLSW Trigger: CCACGAGAGGCACGCCACCGTGGTCAGATGGTCTCACCACTGATGACTCTGAAAGACCCCAGGAAGGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 72 bp | TTGGGGCTGGGGCTGAAGAGTGTACAGAGGAGGGCATaGCCTCCAAAGAGGGTACAGGAGATGGTGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGLGLKSVQRRA*PPKRVQEMVLR Trigger: CCTCAGCACCATCTCCTGTACCCTCTTTGGAGGCCATGCCCTCCTCTGTACACTCTTCAGCCCCAGCCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS TCA 72 bp | CTGAAAGCACCTGGGAGCTTGGAAGGTGGAGGTGGCTaGGCAGGGCCAGTGTCCTCATCAGTTACATCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LKAPGSLEGGGG*AGPVSSSVTSE Trigger: CTCTGATGTAACTGATGAGGACACTGGCCCTGCTCAGCCACCTCCACCTTCCAAGCTCCCAGGTGCTTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 72 bp | CAGTCTGAAAGCACCTGGGAGCTTGGAAGGTGGAGGTaGCTGAGCAGGGCCAGTGTCCTCATCAGTTACATC | + |
|
Preference number: 6 (lower is better) Translates to: QSESTWELGRWR*LSRASVLISYI Trigger: GATGTAACTGATGAGGACACTGGCCCTGCTCAGCCACCTCCACCTTCCAAGCTCCCAGGTGCTTTCAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CAA 90 bp | GTGACCTGGATCTCCTGTGTGGGGATGTATTCTTCCACAAACTTCTaGCCCTGCAGTCGATGCCACAGAGCTGTCTTGCCCGTGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VTWISCVGMYSSTNF*PCSRCHRAVLPVFL Trigger: CAGGAACACGGGCAAGACAGCTCTGTGGCATCGACTGCAGGGCAAGAAGTTTGTGGAAGAATACATCCCCACACAGGAGATCCAGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS TCA 72 bp | CGTGCCTCTCGTGGGAGCTCTCTTCTTTTGTGGATGTaGGACCTTGGTGGAGGACCATTTAGTCTCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RASRGSSLLLWM*DLGGGPFSLRL Trigger: GAGCCTGAGACTAAATGGTCCTCCACCAAGGTCTCACATCCACAAAAGAAGAGAGCTCCCACGAGAGGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS GCA 72 bp | TCTCCTGTGTGGGGATGTATTCTTCCACAAACTTCTTaGCCTGCAGTCGATGCCACAGAGCTGTCTTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SPVWGCILPQTS*PAVDATELSCP Trigger: CGGGCAAGACAGCTCTGTGGCATCGACTGCAGGGCAAGAAGTTTGTGGAAGAATACATCCCCACACAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS GCA 72 bp | CCTCCTAGGGCCTCCCCATCGTCACTGTCACTATCCTaGTGGGGACCTTTGGCTCCAACTTTCTTGTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: PPRASPSSLSLS*WGPLAPTFLSL Trigger: TAAAGACAAGAAAGTTGGAGCCAAAGGTCCCCAGCAGGATAGTGACAGTGACGATGGGGAGGCCCTAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 72 bp | AACTCAGCATCCAGGGCCAATTCAGACTCTGCCTCCTaGGGGTCATTTTCCGTCTTCAAGCCATCTCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: NSASRANSDSAS*GSFSVFKPSPR Trigger: ACGAGGAGATGGCTTGAAGACGGAAAATGACCCCCAGGAGGCAGAGTCTGAATTGGCCCTGGATGCTGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 72 bp | CCTCGGTTTCCTGCTGCACTGATAGCTCCTCTAGTGTaGCATCGATGTCTAGTTGGTTTGTCTCCAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRFPAALIAPLV*HRCLVGLSPAA Trigger: GGCAGCTGGAGACAAACCAACTAGACATCGATGCCACACTAGAGGAGCTATCAGTGCAGCAGGAAACCGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 72 bp | ATGGGATCCGAGGGCAGCAGGGATTTGCCATGTGTCTaGTCTTCTATGTCCACATCATCCTGGAAACCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: MGSEGSRDLPCV*SSMSTSSWKPA Trigger: GGCAGGTTTCCAGGATGATGTGGACATAGAAGACCAGACACATGGCAAATCCCTGCTGCCCTCGGATCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS GCA 72 bp | ATGTATTCTTCCACAAACTTCTTGCCCTGCAGTCGATaGCACAGAGCTGTCTTGCCCGTGTTCCTGTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: MYSSTNFLPCSR*HRAVLPVFLSP Trigger: GGGTGACAGGAACACGGGCAAGACAGCTCTGTGGCATCGACTGCAGGGCAAGAAGTTTGTGGAAGAATACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 72 bp | TCAAGGCCATCTTCAGGGACAAAATCCTCAACATTCTaGACTCTTGCTGGAGCTTCGAGAGCTGGAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRPSSGTKSSTF*TLAGASRAGAG Trigger: GCCAGCTCCAGCTCTCGAAGCTCCAGCAAGAGTCCAGAATGTTGAGGATTTTGTCCCTGAAGATGGCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CAA 72 bp | ATCTCCTGTGTGGGGATGTATTCTTCCACAAACTTCTaGCCCTGCAGTCGATGCCACAGAGCTGTCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ISCVGMYSSTNF*PCSRCHRAVLP Trigger: GGGCAAGACAGCTCTGTGGCATCGACTGCAGGGCAAGAAGTTTGTGGAAGAATACATCCCCACACAGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CAA 72 bp | TTCTTACTGGGCATGGGATCCGAGGGCAGCAGGGATTaGCCATGTGTCTGGTCTTCTATGTCCACATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: FLLGMGSEGSRD*PCVWSSMSTSS Trigger: GGATGATGTGGACATAGAAGACCAGACACATGGCAAATCCCTGCTGCCCTCGGATCCCATGCCCAGTAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CAA 72 bp | ATGGGCCCCTCAGGATCACTCTCTGATGACACCTGTTaGTCCTTCCCTTCCTGGGGTCTTTCAGAGTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: MGPSGSLSDDTC*SFPSWGLSESS Trigger: TGATGACTCTGAAAGACCCCAGGAAGGGAAGGACAAACAGGTGTCATCAGAGAGTGATCCTGAGGGGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS CAA 90 bp | AGACTGATGTTCTTACTGGGCATGGGATCCGAGGGCAGCAGGGATTaGCCATGTGTCTGGTCTTCTATGTCCACATCATCCTGGAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: RLMFLLGMGSEGSRD*PCVWSSMSTSSWKP Trigger: AGGTTTCCAGGATGATGTGGACATAGAAGACCAGACACATGGCAAATCCCTGCTGCCCTCGGATCCCATGCCCAGTAAGAACATCAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS CCA 72 bp | CATGGAAGATTCAGCATAGCGGAAATAGGAGGAACCTaGAGGTCTGTCCAGATGCTCAATGAAGTCCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HGRFSIAEIGGT*RSVQMLNEVPH Trigger: GTGCGGGACTTCATTGAGCATCTGGACAGACCTCCAGGTTCCTCCTATTTCCGCTATGCTGAATCTTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS CCA 72 bp | ACTGATAGCTCCTCTAGTGTGGCATCGATGTCTAGTTaGTTTGTCTCCAGCTGCCTCAGTAGTGTCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TDSSSSVASMSS*FVSSCLSSVSL Trigger: GAGGGAGACACTACTGAGGCAGCTGGAGACAAACCAACTAGACATCGATGCCACACTAGAGGAGCTATCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS CAA 72 bp | TCCCCATCGTCACTGTCACTATCCTGCTGGGGACCTTaGGCTCCAACTTTCTTGTCTTTAGGCACACTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SPSSLSLSCWGP*APTFLSLGTLV Trigger: CACAAGTGTGCCTAAAGACAAGAAAGTTGGAGCCAAAGGTCCCCAGCAGGATAGTGACAGTGACGATGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS CAA 72 bp | CTCGTGGGAGCTCTCTTCTTTTGTGGATGTGAGACCTaGGTGGAGGACCATTTAGTCTCAGGCTCTGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LVGALFFCGCET*VEDHLVSGSEH Trigger: ATGCTCAGAGCCTGAGACTAAATGGTCCTCCACCAAGGTCTCACATCCACAAAAGAAGAGAGCTCCCACGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
||
| CDS CAA 90 bp | GCTGCACTGATAGCTCCTCTAGTGTGGCATCGATGTCTAGTTGGTTaGTCTCCAGCTGCCTCAGTAGTGTCTCCCTCTGTAGTTGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: AALIAPLVWHRCLVG*SPAASVVSPSVVAK Trigger: TTTTGCAACTACAGAGGGAGACACTACTGAGGCAGCTGGAGACAAACCAACTAGACATCGATGCCACACTAGAGGAGCTATCAGTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CCA 72 bp | TCACTCTCTGATGACACCTGTTTGTCCTTCCCTTCCTaGGGTCTTTCAGAGTCATCAGTGGTGAGACCATCT | + |
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Preference number: 6 (lower is better) Translates to: SLSDDTCLSFPS*GLSESSVVRPS Trigger: AGATGGTCTCACCACTGATGACTCTGAAAGACCCCAGGAAGGGAAGGACAAACAGGTGTCATCAGAGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CAA 72 bp | ATAGCTCCTCTAGTGTGGCATCGATGTCTAGTTGGTTaGTCTCCAGCTGCCTCAGTAGTGTCTCCCTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: IAPLVWHRCLVG*SPAASVVSPSV Trigger: TACAGAGGGAGACACTACTGAGGCAGCTGGAGACAAACCAACTAGACATCGATGCCACACTAGAGGAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS GCA 72 bp | AGTGTGGCATCGATGTCTAGTTGGTTTGTCTCCAGCTaGCTCAGTAGTGTCTCCCTCTGTAGTTGCAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: SVASMSSWFVSS*LSSVSLCSCKN Trigger: ATTTTTGCAACTACAGAGGGAGACACTACTGAGGCAGCTGGAGACAAACCAACTAGACATCGATGCCACACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CAA 90 bp | CACTGCTTAGTGATGTCAAACATCATGACCACTCCATTACAGTTCTaGTACACATCCAGAAACTCAGCATCCAGGGCCAATTCAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: HCLVMSNIMTTPLQF*YTSRNSASRANSDS Trigger: AGAGTCTGAATTGGCCCTGGATGCTGAGTTTCTGGATGTGTACAAGAACTGTAATGGAGTGGTCATGATGTTTGACATCACTAAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS CAA 72 bp | GTGATGTCAAACATCATGACCACTCCATTACAGTTCTaGTACACATCCAGAAACTCAGCATCCAGGGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: VMSNIMTTPLQF*YTSRNSASRAN Trigger: ATTGGCCCTGGATGCTGAGTTTCTGGATGTGTACAAGAACTGTAATGGAGTGGTCATGATGTTTGACATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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| CDS GCA 72 bp | CAGTTACATCAGAGAGGTCTTCTCTTACTGGAAACCTaGCCATTCTCCTCTGTGTATCTGATTCATCACTTT | + |
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Preference number: 6 (lower is better) Translates to: QLHQRGLLLLET*PFSSVYLIHHF Trigger: AAAGTGATGAATCAGATACACAGAGGAGAATGGGCAGGTTTCCAGTAAGAGAAGACCTCTCTGATGTAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058137.9 |
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