Pregenerated sensors for RABL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022827Ensembl transcript IDs: ENSMUST00000023524.13, ENSMUST00000130028.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTTCCAGGGCTGAGGGCCACTCAGTCACAGTGGAAGTTCTTCAGTaGCCCTCCTCCAAACCTCTTCCGATCAGAAAAGCCCGGAATCTG | + |
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Preference number: 1 (lower is better) Translates to: SSRAEGHSVTVEVLQ*PSSKPLPIRKARNL Trigger: CAGATTCCGGGCTTTTCTGATCGGAAGAGGTTTGGAGGAGGGGCACTGAAGAACTTCCACTGTGACTGAGTGGCCCTCAGCCCTGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR GCA 90 bp | TCCCTACACAGCAAGAGGAAGCTGTGGACACTGCTGCTGTTCCCTTaGTCTTCCAGGGCTGAGGGCCACTCAGTCACAGTGGAAGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: SLHSKRKLWTLLLFP*SSRAEGHSVTVEVL Trigger: AAGAACTTCCACTGTGACTGAGTGGCCCTCAGCCCTGGAAGAGCAAGGGAACAGCAGCAGTGTCCACAGCTTCCTCTTGCTGTGTAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR CCA 90 bp | CCAAAGCCTGAGAAGTTAATGTCCCTACACAGCAAGAGGAAGCTGTaGACACTGCTGCTGTTCCCTTGCTCTTCCAGGGCTGAGGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: PKPEKLMSLHSKRKL*TLLLFPCSSRAEGH Trigger: GTGGCCCTCAGCCCTGGAAGAGCAAGGGAACAGCAGCAGTGTCCACAGCTTCCTCTTGCTGTGTAGGGACATTAACTTCTCAGGCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR CCA 90 bp | TGCTGTTCCCTTGCTCTTCCAGGGCTGAGGGCCACTCAGTCACAGTaGAAGTTCTTCAGTGCCCCTCCTCCAAACCTCTTCCGATCAGAA | + |
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Preference number: 1 (lower is better) Translates to: CCSLALPGLRATQSQ*KFFSAPPPNLFRSE Trigger: TTCTGATCGGAAGAGGTTTGGAGGAGGGGCACTGAAGAACTTCCACTGTGACTGAGTGGCCCTCAGCCCTGGAAGAGCAAGGGAACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR CCA 90 bp | CTTTCCAAACAGAAAGCAGAAAGAGCCTTCCGACAGCTGCAACCTTaGAGCAGAGGAGCTGTTAGAGTCTCACAGACCCTTCTCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: LSKQKAERAFRQLQP*SRGAVRVSQTLLFW Trigger: CCAGAAGAGAAGGGTCTGTGAGACTCTAACAGCTCCTCTGCTCCAAGGTTGCAGCTGTCGGAAGGCTCTTTCTGCTTTCTGTTTGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR GCA 90 bp | AGTAAGAGTCAGCCTTCGCTGCAGCCCTTGTCTCCAGTTCTTTACTaGATGGGTTTGACAAGCCTTTATGTCGTCACAAGGCTTTTACAT | + |
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Preference number: 1 (lower is better) Translates to: SKSQPSLQPLSPVLY*MGLTSLYVVTRLLH Trigger: ATGTAAAAGCCTTGTGACGACATAAAGGCTTGTCAAACCCATGCAGTAAAGAACTGGAGACAAGGGCTGCAGCGAAGGCTGACTCTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR GCA 90 bp | AACCAGTTATGCAAACATATACATACACACCACCGCCAAAAACGTTaGAGCGTGATGATGAAACCTCAAACACGGGCTCATAATGTATAT | + |
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Preference number: 1 (lower is better) Translates to: NQLCKHIHTHHRQKR*SVMMKPQTRAHNVY Trigger: ATATACATTATGAGCCCGTGTTTGAGGTTTCATCATCACGCTGCAACGTTTTTGGCGGTGGTGTGTATGTATATGTTTGCATAACTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGCAGGAAGCGGGGCGCCGCTGCAGACAGGAGCATCTGGAAACAAGGTGTGTGGAAGTTCTTCAGTaGCCCTCCTCCAAACCTCTT | + |
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Preference number: 2 (lower is better) Translates to: GEQEAGRRCRQEHLETRCVEVLQ*PSSKPL Trigger: AAGAGGTTTGGAGGAGGGGCACTGAAGAACTTCCAC...ACACCTTGTTTCCAGATGCTCCTGTCTGCAGCGGCGCCCCGCTTCCTGCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGAAGCGGGGCGCCGCTGCAGACAGGAGCATCTGGAAACAAGGTGTTGAAAGCAAGAGGAAGCTGTaGACACTGCTGCTGTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SRKRGAAADRSIWKQGVESKRKL*TLLLFP Trigger: AGGGAACAGCAGCAGTGTCCACAGCTTCCTCTTGCT...TTCAACACCTTGTTTCCAGATGCTCCTGTCTGCAGCGGCGCCCCGCTTCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | TCCGACAGCTGCAACCTTGGAGCAGAGGAGCTGTTAGAGTCTCACAGACCCTTCTCAGGGACAGGGTGGTaGGGATACAGAGAATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SDSCNLGAEELLESHRPFSGTGW*GYREWA Trigger: TGCCCATTCTCTGTATCCTCACCACCCTGTCCCTGA...GAAGGGTCTGTGAGACTCTAACAGCTCCTCTGCTCCAAGGTTGCAGCTGTCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGCAGGAAGCGGGGCGCCGCTGCAGACAGGAGCATCTGGAAACAAGGTGTTTAAAATGGCAGGGATaGTTTGGGGTGGATAACTCA | + |
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Preference number: 2 (lower is better) Translates to: GEQEAGRRCRQEHLETRCLKWQG*FGVDNS Trigger: TGAGTTATCCACCCCAAACCATCCCTGCCATTTTAA...ACACCTTGTTTCCAGATGCTCCTGTCTGCAGCGGCGCCCCGCTTCCTGCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGCAGGAAGCGGGGCGCCGCTGCAGACAGGAGCATCTGGAAACAAGGTGTTGTTTTTCCCAAAGCCTaGGAAGTTAATGTCCCTACA | + |
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Preference number: 2 (lower is better) Translates to: GSRKRGAAADRSIWKQGVVFPKA*EVNVPT Trigger: TGTAGGGACATTAACTTCTCAGGCTTTGGGAAAAAC...AACACCTTGTTTCCAGATGCTCCTGTCTGCAGCGGCGCCCCGCTTCCTGCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAAGTGTGGGAAAATCGCAGGCCTGTAAAACCCGCTGGTTCCAAGTAAGATTGCTCTTCCAGGGCTaGGGGCCACTCAGTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: AASVGKSQACKTRWFQVRLLFQG*GPLSHS Trigger: ACTGTGACTGAGTGGCCCTCAGCCCTGGAAGAGCAA...TCTTACTTGGAACCAGCGGGTTTTACAGGCCTGCGATTTTCCCACACTTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCAGAGGAGCTGTTAGAGTCTCACAGACCCTTCTCTTCTGGTCTGTTCGCGGAAGCTGTGGACACTaGTGCTGTTCCCTTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: WSRGAVRVSQTLLFWSVRGSCGH*CCSLAL Trigger: AAGAGCAAGGGAACAGCAGCAGTGTCCACAGCTTCC...GCGAACAGACCAGAAGAGAAGGGTCTGTGAGACTCTAACAGCTCCTCTGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACAGCATTGGAGGAGCCTGCAGCTGAGGACCGTGGGTTTGTGCAATCCAAAAGCAAGAGGAAGCTGTaGACACTGCTGCTGTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LTALEEPAAEDRGFVQSKSKRKL*TLLLFP Trigger: AGGGAACAGCAGCAGTGTCCACAGCTTCCTCTTGCT...TTTGGATTGCACAAACCCACGGTCCTCAGCTGCAGGCTCCTCCAATGCTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTGTTCCCTTGCTCTTCCAGGGCTGAGGGCCACTCAGTCACAGTGGAAGTTTTCCAAGAGAGGGTaGGGTAGCATTTTGAGATGT | + |
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Preference number: 2 (lower is better) Translates to: CCCSLALPGLRATQSQWKFSKRG*GSILRC Trigger: ACATCTCAAAATGCTACCTCACCCTCTCTTGGAAAA...CTTCCACTGTGACTGAGTGGCCCTCAGCCCTGGAAGAGCAAGGGAACAGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGACAGCTGCAACCTTGGAGCAGAGGAGCTGTTAGAGTCTCACAGACCCTTCTCTCCAGTTCTTTACTaGATGGGTTTGACAAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: SDSCNLGAEELLESHRPFSPVLY*MGLTSL Trigger: AAGGCTTGTCAAACCCATGCAGTAAAGAACTGGAGA...GAAGGGTCTGTGAGACTCTAACAGCTCCTCTGCTCCAAGGTTGCAGCTGTCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | GTTATGCAAACATATACATACACACCACCGCCAAAAACGTTGCAGCGTGATGATTCAGGGACAGGGTGGTaGGGATACAGAGAATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: VMQTYTYTPPPKTLQRDDSGTGW*GYREWA Trigger: TGCCCATTCTCTGTATCCTCACCACCCTGTCCCTGA...ATCATCACGCTGCAACGTTTTTGGCGGTGGTGTGTATGTATATGTTTGCATAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAAGTGTGGGAAAATCGCAGGCCTGTAAAACCCGCTGGTTCCAAGTAAGATTAAAATGGCAGGGATaGTTTGGGGTGGATAACTCA | + |
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Preference number: 2 (lower is better) Translates to: AASVGKSQACKTRWFQVRLKWQG*FGVDNS Trigger: TGAGTTATCCACCCCAAACCATCCCTGCCATTTTAA...TCTTACTTGGAACCAGCGGGTTTTACAGGCCTGCGATTTTCCCACACTTGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAGTCCATCGCTCTTCCCAGACACTAAGCCCTTTCCCAGAGAGAGCAGAGGAAAACTTCATGGCGCTTaGTTTCATGAATCTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: ISPSLFPDTKPFPRESRGKLHGA*FHESGP Trigger: TGGACCAGATTCATGAAACCAAGCGCCATGAAGTTT...TCCTCTGCTCTCTCTGGGAAAGGGCTTAGTGTCTGGGAAGAGCGATGGACTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR CAA 90 bp | GCTGAGGACCGTGGGTTTGTGCAATCCAAATTAATCTCTTCAGCATaGAAGTCCTCAGCCAGGAAAGCAGTCCTGATTAAAACTTCATGG | + |
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Preference number: 2 (lower is better) Translates to: AEDRGFVQSKLISSA*KSSARKAVLIKTSW Trigger: CCATGAAGTTTTAATCAGGACTGCTTTCCTGGCTGAGGACTTCAATGCTGAAGAGATTAATTTGGATTGCACAAACCCACGGTCCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGACAGGAGCATCTGGAAACAAGGTGTTGAACACAGCAGCCAATTACAGTGGGCTAAGAAACAATaGCAACCAGTTATGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: AADRSIWKQGVEHSSQLQWAKKQ*QPVMQT Trigger: TGTTTGCATAACTGGTTGTCATTGTTTCTTAGCCCA...CTGTAATTGGCTGCTGTGTTCAACACCTTGTTTCCAGATGCTCCTGTCTGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGCCTTTATGTCGTCACAAGGCTTTTACATAAGCTATAATCAGGGACAGGGTGGTGAGGTAGCATTTTaGGATGTTTTTCCCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: QAFMSSQGFYISYNQGQGGEVAF*DVFPKA Trigger: GGCTTTGGGAAAAACATCTCAAAATGCTACCTCACC...ACCCTGTCCCTGATTATAGCTTATGTAAAAGCCTTGTGACGACATAAAGGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAACATATACATACACACCACCGCCAAAAACGTTGCAGCGTGATGATGAAAGACCTTCCATGCCGCTaGTTCCTTTCAATTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: CKHIHTHHRQKRCSVMMKDLPCR*FLSIFQ Trigger: TTGGAAAATTGAAAGGAAGCAGCGGCATGGAAGGTC...TTTCATCATCACGCTGCAACGTTTTTGGCGGTGGTGTGTATGTATATGTTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTTGCTATTCTTAGGCATCCCTGTGTGTAATGAGGATGGAGAAAATGAAATAGGTGAGGTAGCATTTTaGGATGTTTTTCCCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GLLFLGIPVCNEDGENEIGEVAF*DVFPKA Trigger: GGCTTTGGGAAAAACATCTCAAAATGCTACCTCACC...TATTTCATTTTCTCCATCCTCATTACACACAGGGATGCCTAAGAATAGCAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | GTTATGCAAACATATACATACACACCACCGCCAAAAACGTTGCAGCGTGATGATTTTTCCAAGAGAGGGTaGGGTAGCATTTTGAGATGT | + |
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Preference number: 2 (lower is better) Translates to: VMQTYTYTPPPKTLQRDDFSKRG*GSILRC Trigger: ACATCTCAAAATGCTACCTCACCCTCTCTTGGAAAA...ATCATCACGCTGCAACGTTTTTGGCGGTGGTGTGTATGTATATGTTTGCATAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR GCA 90 bp | CTTACTGTTCATCGTATTAAGGGACATTCCAGGAATTGGATTTCCTTACAAATAGGAAGCTGTGGACACTaGTGCTGTTCCCTTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LTVHRIKGHSRNWISLQIGSCGH*CCSLAL Trigger: AAGAGCAAGGGAACAGCAGCAGTGTCCACAGCTTCC...TATTTGTAAGGAAATCCAATTCCTGGAATGTCCCTTAATACGATGAACAGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGACCCTTCTCTTCTGGTCTGTTCGCCATGTATTATTAATTTGTATTTCTATCCAGGAAAGCAGTCCTaGTTAAAACTTCATGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: TDPSLLVCSPCIINLYFYPGKQS*LKLHGA Trigger: AGCGCCATGAAGTTTTAATCAGGACTGCTTTCCTGG...ATAGAAATACAAATTAATAATACATGGCGAACAGACCAGAAGAGAAGGGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR-3UTR CCA 90 bp | ACATATACATACACACCACCGCCAAAAACGTTGCAGCGTGATGATGAAACCTCAGGACATTCCAGGAATTaGATTTCCTTACAAATAAAC | + |
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Preference number: 2 (lower is better) Translates to: TYTYTPPPKTLQRDDETSGHSRN*ISLQIN Trigger: GTTTATTTGTAAGGAAATCCAATTCCTGGAATGTCC...TGAGGTTTCATCATCACGCTGCAACGTTTTTGGCGGTGGTGTGTATGTATATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGACCCTTCTCTTCTGGTCTGTTCGCCATGTATTATTAATTTGTATTTCTATGACCTTCCATGCCGCTaGTTCCTTTCAATTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: TDPSLLVCSPCIINLYFYDLPCR*FLSIFQ Trigger: TTGGAAAATTGAAAGGAAGCAGCGGCATGGAAGGTC...ATAGAAATACAAATTAATAATACATGGCGAACAGACCAGAAGAGAAGGGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR TCA 90 bp | CTTACTGTTCATCGTATTAAGGGACATTCCAGGAATTGGATTTCCTTACAAATATTTACTGCATGGGTTTaGCAAGCCTTTATGTCGTCA | + |
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Preference number: 2 (lower is better) Translates to: LTVHRIKGHSRNWISLQIFTAWV*QAFMSS Trigger: TGACGACATAAAGGCTTGTCAAACCCATGCAGTAAA...TATTTGTAAGGAAATCCAATTCCTGGAATGTCCCTTAATACGATGAACAGTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR GCA 72 bp | AGCAAGAGGAAGCTGTGGACACTGCTGCTGTTCCCTTaGTCTTCCAGGGCTGAGGGCCACTCAGTCACAGTG | + |
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Preference number: 3 (lower is better) Translates to: SKRKLWTLLLFP*SSRAEGHSVTV Trigger: CACTGTGACTGAGTGGCCCTCAGCCCTGGAAGAGCAAGGGAACAGCAGCAGTGTCCACAGCTTCCTCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR TCA 72 bp | GTGGACACTGCTGCTGTTCCCTTGCTCTTCCAGGGCTaGGGGCCACTCAGTCACAGTGGAAGTTCTTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: VDTAAVPLLFQG*GPLSHSGSSSV Trigger: CACTGAAGAACTTCCACTGTGACTGAGTGGCCCTCAGCCCTGGAAGAGCAAGGGAACAGCAGCAGTGTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR CCA 72 bp | GCAAGTGTGGGAAAATCGCAGGCCTGTAAAACCCGCTaGTTCCAAGTAAGAGTCAGCCTTCGCTGCAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: ASVGKSQACKTR*FQVRVSLRCSP Trigger: AGGGCTGCAGCGAAGGCTGACTCTTACTTGGAACCAGCGGGTTTTACAGGCCTGCGATTTTCCCACACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR CCA 72 bp | CAGAAAGCAGAAAGAGCCTTCCGACAGCTGCAACCTTaGAGCAGAGGAGCTGTTAGAGTCTCACAGACCCTT | + |
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Preference number: 3 (lower is better) Translates to: QKAERAFRQLQP*SRGAVRVSQTL Trigger: AAGGGTCTGTGAGACTCTAACAGCTCCTCTGCTCCAAGGTTGCAGCTGTCGGAAGGCTCTTTCTGCTTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR GCA 72 bp | AAAACCCGCTGGTTCCAAGTAAGAGTCAGCCTTCGCTaGAGCCCTTGTCTCCAGTTCTTTACTGCATGGGTT | + |
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Preference number: 3 (lower is better) Translates to: KTRWFQVRVSLR*SPCLQFFTAWV Trigger: AACCCATGCAGTAAAGAACTGGAGACAAGGGCTGCAGCGAAGGCTGACTCTTACTTGGAACCAGCGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR TCA 72 bp | TCTACTGAGCTTGACAGCATTGGAGGAGCCTGCAGCTaGGGACCGTGGGTTTGTGCAATCCAAATTAATCTC | + |
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Preference number: 3 (lower is better) Translates to: STELDSIGGACS*GPWVCAIQINL Trigger: GAGATTAATTTGGATTGCACAAACCCACGGTCCTCAGCTGCAGGCTCCTCCAATGCTGTCAAGCTCAGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR TCA 72 bp | TGCAGCCCTTGTCTCCAGTTCTTTACTGCATGGGTTTaGCAAGCCTTTATGTCGTCACAAGGCTTTTACATA | + |
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Preference number: 3 (lower is better) Translates to: CSPCLQFFTAWV*QAFMSSQGFYI Trigger: TATGTAAAAGCCTTGTGACGACATAAAGGCTTGTCAAACCCATGCAGTAAAGAACTGGAGACAAGGGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR CCA 72 bp | AAAAAGAACCACCAAAGAGGCAATAATCTGTCTTACTaGCCTTGTACAGGTCTCAGATTTCACCCACTTTCC | + |
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Preference number: 3 (lower is better) Translates to: KKNHQRGNNLSY*PCTGLRFHPLS Trigger: GGAAAGTGGGTGAAATCTGAGACCTGTACAAGGCCAGTAAGACAGATTATTGCCTCTTTGGTGGTTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGCCTTTATGTCGTCACAAGGCTTTTACATAAGCTATAATCAGGGACAGGGTTTAATCTCTTCAGCATaGAAGTCCTCAGCCAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: QAFMSSQGFYISYNQGQGLISSA*KSSARK Trigger: TTTCCTGGCTGAGGACTTCAATGCTGAAGAGATTAA...ACCCTGTCCCTGATTATAGCTTATGTAAAAGCCTTGTGACGACATAAAGGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| 3UTR-3UTR CAA 90 bp | GTTATGCAAACATATACATACACACCACCGCCAAAAACGTTGCAGCGTGATGATGGGACATTCCAGGAATaGGATTTCCTTACAAATAAA | + |
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Preference number: 3 (lower is better) Translates to: VMQTYTYTPPPKTLQRDDGTFQE*DFLTNK Trigger: TTTATTTGTAAGGAAATCCAATTCCTGGAATGTCCC...ATCATCACGCTGCAACGTTTTTGGCGGTGGTGTGTATGTATATGTTTGCATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| CDS-3UTR GCA 90 bp | AGCAGGAAGCGGGGCGCCGCTGCAGACAGGAGCATCTGGAAACAAGGTGTTGAATCACACTGCTGGCACTaGCCACAGAGCCTCCAACAT | + |
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Preference number: 4 (lower is better) Translates to: SRKRGAAADRSIWKQGVESHCWH*PQSLQH Trigger: ATGTTGGAGGCTCTGTGGGCAGTGCCAGCAGTGTGA...TTCAACACCTTGTTTCCAGATGCTCCTGTCTGCAGCGGCGCCCCGCTTCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| CDS-3UTR CCA 90 bp | TCCGACAGCTGCAACCTTGGAGCAGAGGAGCTGTTAGAGTCTCACAGACCCTTCTGCTTTTCACACTGCTaGCACTGCCCACAGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SDSCNLGAEELLESHRPFCFSHC*HCPQSL Trigger: GAGGCTCTGTGGGCAGTGCCAGCAGTGTGAAAAGCA...GAAGGGTCTGTGAGACTCTAACAGCTCCTCTGCTCCAAGGTTGCAGCTGTCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
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| CDS-3UTR TCA 90 bp | ACAGCAAGAGGAAGCTGTGGACACTGCTGCTGTTCCCTTGCTCTTCCAGGGCTGCCAGGAAAGCAGTCCTaGTTAAAACTTCATGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: TARGSCGHCCCSLALPGLPGKQS*LKLHGA Trigger: AGCGCCATGAAGTTTTAATCAGGACTGCTTTCCTGG...CAGCCCTGGAAGAGCAAGGGAACAGCAGCAGTGTCCACAGCTTCCTCTTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
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| CDS-3UTR GCA 90 bp | GTGGAAGTTCTTCAGTGCCCCTCCTCCAAACCTCTTCCGATCAGAAAAGCCCGGGACTCCGGTTGGAACTaGATCCCGATTGAGAACTTC | + |
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Preference number: 4 (lower is better) Translates to: VEVLQCPSSKPLPIRKARDSGWN*IPIENF Trigger: GAAGTTCTCAATCGGGATGCAGTTCCAACCGGAGTC...CCGGGCTTTTCTGATCGGAAGAGGTTTGGAGGAGGGGCACTGAAGAACTTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
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| CDS-3UTR GCA 90 bp | TTAATGTCCCTACACAGCAAGAGGAAGCTGTGGACACTGCTGCTGTTCCCTTGCTTGTGCTTTTCACACTaGTGGCACTGCCCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LMSLHSKRKLWTLLLFPCLCFSH*WHCPQS Trigger: GCTCTGTGGGCAGTGCCAGCAGTGTGAAAAGCACAA...GCAAGGGAACAGCAGCAGTGTCCACAGCTTCCTCTTGCTGTGTAGGGACATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTCTTCAGTGCCCCTCCTCCAAACCTCTTCCGATCAGAAAAGCCCGGAATCTTGTGCTTTTCACACTaGTGGCACTGCCCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KFFSAPPPNLFRSEKPGILCFSH*WHCPQS Trigger: GCTCTGTGGGCAGTGCCAGCAGTGTGAAAAGCACAA...GATTCCGGGCTTTTCTGATCGGAAGAGGTTTGGAGGAGGGGCACTGAAGAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
||
| CDS-3UTR TCA 90 bp | GTGGAAGTTCTTCAGTGCCCCTCCTCCAAACCTCTTCCGATCAGAAAAGCCCGGGGATTTCCTAACACTTaGTTGTGGCACAGAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VEVLQCPSSKPLPIRKARGFPNT*LWHRRW Trigger: CCATCTTCTGTGCCACAATCAAGTGTTAGGAAATCC...CCGGGCTTTTCTGATCGGAAGAGGTTTGGAGGAGGGGCACTGAAGAACTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGTCCATCGCTCTTCCCAGACACTAAGCCCTTTCCCAGAGAGAGCAGAGGAAGAACACCGCTCTTGTaGTTTTCACACTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSLFPDTKPFPRESRGRTPLL*FSHCWH Trigger: GTGCCAGCAGTGTGAAAAGCACAAGAGCGGTGTTCT...TCCTCTGCTCTCTCTGGGAAAGGGCTTAGTGTCTGGGAAGAGCGATGGACTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| 3UTR CAA 72 bp | CTGGTTCCAAGTAAGAGTCAGCCTTCGCTGCAGCCCTaGTCTCCAGTTCTTTACTGCATGGGTTTGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVPSKSQPSLQP*SPVLYCMGLTS Trigger: GCTTGTCAAACCCATGCAGTAAAGAACTGGAGACAAGGGCTGCAGCGAAGGCTGACTCTTACTTGGAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR GCA 90 bp | GAATGGGCAGAGCTAGGACCTTCCATGCCGCTGCTTCCTTTCAATTTTCCAAGAGTGGAAGTTCTTCAGTaGCCCTCCTCCAAACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EWAELGPSMPLLPFNFPRVEVLQ*PSSKPL Trigger: AAGAGGTTTGGAGGAGGGGCACTGAAGAACTTCCAC...TCTTGGAAAATTGAAAGGAAGCAGCGGCATGGAAGGTCCTAGCTCTGCCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| 3UTR CAA 72 bp | CTAAGCCCTTTCCCAGAGAGAGCAGAGGAGATGGGGTaGCTATTCTTAGGCATCCCTGTGTGTAATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPFPERAEEMG*LFLGIPVCNED Trigger: ATCCTCATTACACACAGGGATGCCTAAGAATAGCAACCCCATCTCCTCTGCTCTCTCTGGGAAAGGGCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGTTAATGTCCCTACACAGCAAGAGGAAGCTGTGGACACTGCTGCTGTTCTGGCGCTTGGTTTCATaGATCTGGTCCAGTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EKLMSLHSKRKLWTLLLFWRLVS*IWSSLV Trigger: GACTAAACTGGACCAGATTCATGAAACCAAGCGCCA...GAACAGCAGCAGTGTCCACAGCTTCCTCTTGCTGTGTAGGGACATTAACTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS-3UTR CCA 90 bp | TTAATGTCCCTACACAGCAAGAGGAAGCTGTGGACACTGCTGCTGTTCCCTTGCTTGTGGCACAGAAGATaGACGAGTGAAGATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMSLHSKRKLWTLLLFPCLWHRR*TSEDFP Trigger: TGGGAAATCTTCACTCGTCCATCTTCTGTGCCACAA...GCAAGGGAACAGCAGCAGTGTCCACAGCTTCCTCTTGCTGTGTAGGGACATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR CCA 90 bp | TACTGGCCTTGTACAGGTCTCAGATTTCACCCACTTTCCAAACAGAAAGCAGAATGCTTTTCACACTGCTaGCACTGCCCACAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YWPCTGLRFHPLSKQKAECFSHC*HCPQSL Trigger: GAGGCTCTGTGGGCAGTGCCAGCAGTGTGAAAAGCA...TTCTGCTTTCTGTTTGGAAAGTGGGTGAAATCTGAGACCTGTACAAGGCCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR CCA 90 bp | TCCGACAGCTGCAACCTTGGAGCAGAGGAGCTGTTAGAGTCTCACAGACCCTTCCCCTATTACCAACAGTaGGATTTGGTTATCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDSCNLGAEELLESHRPFPYYQQ*DLVISK Trigger: TTTGCTGATAACCAAATCCCACTGTTGGTAATAGGG...GAAGGGTCTGTGAGACTCTAACAGCTCCTCTGCTCCAAGGTTGCAGCTGTCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS-3UTR GCA 90 bp | CAAGCCTTTATGTCGTCACAAGGCTTTTACATAAGCTATAATCAGGGACAGGGTTCACACTGCTGGCACTaGCCACAGAGCCTCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QAFMSSQGFYISYNQGQGSHCWH*PQSLQH Trigger: ATGTTGGAGGCTCTGTGGGCAGTGCCAGCAGTGTGA...ACCCTGTCCCTGATTATAGCTTATGTAAAAGCCTTGTGACGACATAAAGGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCAAGTGTGGGAAAATCGCAGGCCTGTAAAACCCGCTGGTTCCAAGTAAAACTTCATGGCGCTTaGTTTCATGAATCTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAASVGKSQACKTRWFQVKLHGA*FHESGP Trigger: TGGACCAGATTCATGAAACCAAGCGCCATGAAGTTT...TACTTGGAACCAGCGGGTTTTACAGGCCTGCGATTTTCCCACACTTGCTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS-3UTR GCA 90 bp | TGCAAACATATACATACACACCACCGCCAAAAACGTTGCAGCGTGATGATGAAAGACTCCGGTTGGAACTaGATCCCGATTGAGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CKHIHTHHRQKRCSVMMKDSGWN*IPIENF Trigger: GAAGTTCTCAATCGGGATGCAGTTCCAACCGGAGTC...TTTCATCATCACGCTGCAACGTTTTTGGCGGTGGTGTGTATGTATATGTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| 3UTR CAA 72 bp | CTGCAGCCCTTGTCTCCAGTTCTTTACTGCATGGGTTaGACAAGCCTTTATGTCGTCACAAGGCTTTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LQPLSPVLYCMG*TSLYVVTRLLH Trigger: ATGTAAAAGCCTTGTGACGACATAAAGGCTTGTCAAACCCATGCAGTAAAGAACTGGAGACAAGGGCTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| 3UTR CAA 72 bp | ATGCAAACATATACATACACACCACCGCCAAAAACGTaGCAGCGTGATGATGAAACCTCAAACACGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MQTYTYTPPPKT*QRDDETSNTGS Trigger: TGAGCCCGTGTTTGAGGTTTCATCATCACGCTGCAACGTTTTTGGCGGTGGTGTGTATGTATATGTTTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR TCA 90 bp | GAATGGGCAGAGCTAGGACCTTCCATGCCGCTGCTTCCTTTCAATTTTCCAAGAAGTCATGTACTAAAATaGTGCCGTTTACAGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EWAELGPSMPLLPFNFPRSHVLK*CRLQSC Trigger: ACAACTCTGTAAACGGCATCATTTTAGTACATGACT...TCTTGGAAAATTGAAAGGAAGCAGCGGCATGGAAGGTCCTAGCTCTGCCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR TCA 90 bp | CAAGCCTTTATGTCGTCACAAGGCTTTTACATAAGCTATAATCAGGGACAGGGTGGATTTCCTAACACTTaGTTGTGGCACAGAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QAFMSSQGFYISYNQGQGGFPNT*LWHRRW Trigger: CCATCTTCTGTGCCACAATCAAGTGTTAGGAAATCC...ACCCTGTCCCTGATTATAGCTTATGTAAAAGCCTTGTGACGACATAAAGGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCCTTTATGTCGTCACAAGGCTTTTACATAAGCTATAATCAGGGACAGGGTACCAACAGTGGGATTTaGTTATCAGCAAACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAFMSSQGFYISYNQGQGTNSGI*LSANCS Trigger: AGAACAGTTTGCTGATAACCAAATCCCACTGTTGGT...ACCCTGTCCCTGATTATAGCTTATGTAAAAGCCTTGTGACGACATAAAGGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS-3UTR TCA 90 bp | GTTATGCAAACATATACATACACACCACCGCCAAAAACGTTGCAGCGTGATGATAGTCATGTACTAAAATaGTGCCGTTTACAGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VMQTYTYTPPPKTLQRDDSHVLK*CRLQSC Trigger: ACAACTCTGTAAACGGCATCATTTTAGTACATGACT...ATCATCACGCTGCAACGTTTTTGGCGGTGGTGTGTATGTATATGTTTGCATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR CCA 90 bp | CATCGTATTAAGGGACATTCCAGGAATTGGATTTCCTTACAAATAAACAGAACATTGTGGCACAGAAGATaGACGAGTGAAGATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRIKGHSRNWISLQINRTLWHRR*TSEDFP Trigger: TGGGAAATCTTCACTCGTCCATCTTCTGTGCCACAA...TGTTCTGTTTATTTGTAAGGAAATCCAATTCCTGGAATGTCCCTTAATACGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAGCAGGAAGCGGGGCGCCGCTGCAGACAGGAGCATCTGGAAACAAGGTGTCTGAGCTTGACAGCATaGGAGGAGCCTGCAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GEQEAGRRCRQEHLETRCLSLTA*EEPAAE Trigger: CTCAGCTGCAGGCTCCTCCAATGCTGTCAAGCTCAG...ACACCTTGTTTCCAGATGCTCCTGTCTGCAGCGGCGCCCCGCTTCCTGCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS-3UTR CAA 90 bp | TTGACAGCATTGGAGGAGCCTGCAGCTGAGGACCGTGGGTTTGTGCAATCCAAAGGAACTGCATCCCGATaGAGAACTTCCAATGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTALEEPAAEDRGFVQSKGTASR*RTSNDQ Trigger: CTGGTCATTGGAAGTTCTCAATCGGGATGCAGTTCC...TTTGGATTGCACAAACCCACGGTCCTCAGCTGCAGGCTCCTCCAATGCTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
||
| CDS-3UTR CAA 90 bp | CCTACACAGCAAGAGGAAGCTGTGGACACTGCTGCTGTTCCCTTGCTCTTCCAGAAAAATCTACTGAGCTaGACAGCATTGGAGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PTQQEEAVDTAAVPLLFQKNLLS*TALEEP Trigger: AGGCTCCTCCAATGCTGTCAAGCTCAGTAGATTTTT...CTGGAAGAGCAAGGGAACAGCAGCAGTGTCCACAGCTTCCTCTTGCTGTGTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS-3UTR CAA 90 bp | GAATGGGCAGAGCTAGGACCTTCCATGCCGCTGCTTCCTTTCAATTTTCCAAGATGTAGAACACCGCTCTaGTGCTTTTCACACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EWAELGPSMPLLPFNFPRCRTPL*CFSHCW Trigger: CCAGCAGTGTGAAAAGCACAAGAGCGGTGTTCTACA...TCTTGGAAAATTGAAAGGAAGCAGCGGCATGGAAGGTCCTAGCTCTGCCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR CAA 90 bp | GAATGGGCAGAGCTAGGACCTTCCATGCCGCTGCTTCCTTTCAATTTTCCAAGAGGAACTGCATCCCGATaGAGAACTTCCAATGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: EWAELGPSMPLLPFNFPRGTASR*RTSNDQ Trigger: CTGGTCATTGGAAGTTCTCAATCGGGATGCAGTTCC...TCTTGGAAAATTGAAAGGAAGCAGCGGCATGGAAGGTCCTAGCTCTGCCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR CAA 90 bp | CCTACACAGCAAGAGGAAGCTGTGGACACTGCTGCTGTTCCCTTGCTCTTCCAGTTAATCTCTTCAGCATaGAAGTCCTCAGCCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PTQQEEAVDTAAVPLLFQLISSA*KSSARK Trigger: TTTCCTGGCTGAGGACTTCAATGCTGAAGAGATTAA...CTGGAAGAGCAAGGGAACAGCAGCAGTGTCCACAGCTTCCTCTTGCTGTGTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS TCA 90 bp | ATATCCACCGAGCAGCCCACAGTCCATGACGGATTTCCTAACACTTaGTTGTGGCACAGAAGATGGACGAGTGAAGATTTCCCAACACCT | + |
|
Preference number: 5 (lower is better) Translates to: ISTEQPTVHDGFPNT*LWHRRWTSEDFPTP Trigger: AGGTGTTGGGAAATCTTCACTCGTCCATCTTCTGTGCCACAATCAAGTGTTAGGAAATCCGTCATGGACTGTGGGCTGCTCGGTGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS GCA 90 bp | TGCCGTTTACAGAGTTGTAGAACACCGCTCTTGTGCTTTTCACACTaGTGGCACTGCCCACAGAGCCTCCAACATCCCATAGTTCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: CRLQSCRTPLLCFSH*WHCPQSLQHPIVLY Trigger: ATATAGAACTATGGGATGTTGGAGGCTCTGTGGGCAGTGCCAGCAGTGTGAAAAGCACAAGAGCGGTGTTCTACAACTCTGTAAACGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS GCA 90 bp | CAGAGTTGTAGAACACCGCTCTTGTGCTTTTCACACTGCTGGCACTaGCCACAGAGCCTCCAACATCCCATAGTTCTATATAGTATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSCRTPLLCFSHCWH*PQSLQHPIVLYSMS Trigger: AGACATACTATATAGAACTATGGGATGTTGGAGGCTCTGTGGGCAGTGCCAGCAGTGTGAAAAGCACAAGAGCGGTGTTCTACAACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS CCA 90 bp | CGTTTACAGAGTTGTAGAACACCGCTCTTGTGCTTTTCACACTGCTaGCACTGCCCACAGAGCCTCCAACATCCCATAGTTCTATATAGT | + |
|
Preference number: 5 (lower is better) Translates to: RLQSCRTPLLCFSHC*HCPQSLQHPIVLYS Trigger: ACTATATAGAACTATGGGATGTTGGAGGCTCTGTGGGCAGTGCCAGCAGTGTGAAAAGCACAAGAGCGGTGTTCTACAACTCTGTAAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCAGCAAGTGTGGGAAAATCGCAGGCCTGTAAAACCCGCTGGTTCCAAGTATACCAACAGTGGGATTaGGTTATCAGCAAACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAASVGKSQACKTRWFQVYQQWD*VISKLF Trigger: GAACAGTTTGCTGATAACCAAATCCCACTGTTGGTA...TACTTGGAACCAGCGGGTTTTACAGGCCTGCGATTTTCCCACACTTGCTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS TCA 90 bp | AGTCCCCATTTGTCACCAGGACTCCGGTTGGAACTGCATCCCGATTaGGAACTTCCAATGACCAGCGATATAAGTTTTGAGATGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPHLSPGLRLELHPD*ELPMTSDISFEMTS Trigger: AGAAGTCATCTCAAAACTTATATCGCTGGTCATTGGAAGTTCTCAATCGGGATGCAGTTCCAACCGGAGTCCTGGTGACAAATGGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130028.2 |
||
| CDS TCA 90 bp | AATCCCCATTTGTCACCAGGACTCCGGTTGGAACTGCATCCCGATTaGGAACTTCCAATGACCAGCGATATAAGTTTTGAGATGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NPHLSPGLRLELHPD*ELPMTSDISFEMTS Trigger: AGAAGTCATCTCAAAACTTATATCGCTGGTCATTGGAAGTTCTCAATCGGGATGCAGTTCCAACCGGAGTCCTGGTGACAAATGGGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS TCA 90 bp | GCCAGGAAAGCAGTCCTGATTAAAACTTCATGGCGCTTGGTTTCATaGATCTGGTCCAGTTTAGTCCCTATTACCAACAGTGGGATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARKAVLIKTSWRLVS*IWSSLVPITNSGIW Trigger: CCAAATCCCACTGTTGGTAATAGGGACTAAACTGGACCAGATTCATGAAACCAAGCGCCATGAAGTTTTAATCAGGACTGCTTTCCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS CCA 90 bp | CTTGGTTTCATGAATCTGGTCCAGTTTAGTCCCTATTACCAACAGTaGGATTTGGTTATCAGCAAACTGTTCTCGGTCATAATCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LGFMNLVQFSPYYQQ*DLVISKLFSVIIPI Trigger: AATGGGGATTATGACCGAGAACAGTTTGCTGATAACCAAATCCCACTGTTGGTAATAGGGACTAAACTGGACCAGATTCATGAAACCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS-3UTR CAA 90 bp | ACAGACCCTTCTCTTCTGGTCTGTTCGCCATGTATTATTAATTTGTATTTCTATTGTAGAACACCGCTCTaGTGCTTTTCACACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TDPSLLVCSPCIINLYFYCRTPL*CFSHCW Trigger: CCAGCAGTGTGAAAAGCACAAGAGCGGTGTTCTACA...ATAGAAATACAAATTAATAATACATGGCGAACAGACCAGAAGAGAAGGGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS TCA 90 bp | ACTGCATCCCGATTGAGAACTTCCAATGACCAGCGATATAAGTTTTaGGATGACTTCTTATTTGTTAAGTCATGTACTAAAATGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TASRLRTSNDQRYKF*DDFLFVKSCTKMMP Trigger: CGGCATCATTTTAGTACATGACTTAACAAATAAGAAGTCATCTCAAAACTTATATCGCTGGTCATTGGAAGTTCTCAATCGGGATGCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS GCA 72 bp | CAGAGTTGTAGAACACCGCTCTTGTGCTTTTCACACTaGTGGCACTGCCCACAGAGCCTCCAACATCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: QSCRTPLLCFSH*WHCPQSLQHPI Trigger: TATGGGATGTTGGAGGCTCTGTGGGCAGTGCCAGCAGTGTGAAAAGCACAAGAGCGGTGTTCTACAACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS GCA 72 bp | AGAACACCGCTCTTGTGCTTTTCACACTGCTGGCACTaGCCACAGAGCCTCCAACATCCCATAGTTCTATAT | + |
|
Preference number: 6 (lower is better) Translates to: RTPLLCFSHCWH*PQSLQHPIVLY Trigger: ATATAGAACTATGGGATGTTGGAGGCTCTGTGGGCAGTGCCAGCAGTGTGAAAAGCACAAGAGCGGTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS CAA 72 bp | GGTTATCAGCAAACTGTTCTCGGTCATAATCCCCATTaGTCACCAGGACTCCGGTTGGAACTGCATCCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: GYQQTVLGHNPH*SPGLRLELHPD Trigger: ATCGGGATGCAGTTCCAACCGGAGTCCTGGTGACAAATGGGGATTATGACCGAGAACAGTTTGCTGATAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS TCA 72 bp | GAGCAGCCCACAGTCCATGACGGATTTCCTAACACTTaGTTGTGGCACAGAAGATGGACGAGTGAAGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: EQPTVHDGFPNT*LWHRRWTSEDF Trigger: GAAATCTTCACTCGTCCATCTTCTGTGCCACAATCAAGTGTTAGGAAATCCGTCATGGACTGTGGGCTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS TCA 72 bp | TTGTCACCAGGACTCCGGTTGGAACTGCATCCCGATTaGGAACTTCCAATGACCAGCGATATAAGTTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSPGLRLELHPD*ELPMTSDISFE Trigger: CTCAAAACTTATATCGCTGGTCATTGGAAGTTCTCAATCGGGATGCAGTTCCAACCGGAGTCCTGGTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023524.13 ENSMUST00000130028.2 |
||
| CDS CAA 72 bp | CTGGTCCAGTTTAGTCCCTATTACCAACAGTGGGATTaGGTTATCAGCAAACTGTTCTCGGTCATAATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LVQFSPYYQQWD*VISKLFSVIIP Trigger: GGGGATTATGACCGAGAACAGTTTGCTGATAACCAAATCCCACTGTTGGTAATAGGGACTAAACTGGACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS TCA 72 bp | GCAGTCCTGATTAAAACTTCATGGCGCTTGGTTTCATaGATCTGGTCCAGTTTAGTCCCTATTACCAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: AVLIKTSWRLVS*IWSSLVPITNS Trigger: ACTGTTGGTAATAGGGACTAAACTGGACCAGATTCATGAAACCAAGCGCCATGAAGTTTTAATCAGGACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
||
| CDS CAA 90 bp | TTCATGAATCTGGTCCAGTTTAGTCCCTATTACCAACAGTGGGATTaGGTTATCAGCAAACTGTTCTCGGTCATAATCCCCATTTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: FMNLVQFSPYYQQWD*VISKLFSVIIPICH Trigger: GTGACAAATGGGGATTATGACCGAGAACAGTTTGCTGATAACCAAATCCCACTGTTGGTAATAGGGACTAAACTGGACCAGATTCATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023524.13 |
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