Pregenerated sensors for RABL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022621Ensembl transcript IDs: ENSMUST00000023294.15, ENSMUST00000094056.12, ENSMUST00000169466.8, ENSMUST00000170126.2, ENSMUST00000171580.8, ENSMUST00000172053.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAAGTGGGGCATTGGCTTGTCCACCCAGGCAATGGGAAGAGTTTaGAGGCAGGGTGAGAGGGGAAGGGACTGTCAGGGACTGCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: EKWGIGLSTQAMGRV*RQGERGRDCQGLPL Trigger: CAAGGGCAGTCCCTGACAGTCCCTTCCCCTCTCACCCTGCCTCCAAACTCTTCCCATTGCCTGGGTGGACAAGCCAATGCCCCACTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
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| 3UTR CCA 90 bp | AGGGGTAGCCTAGAGATGTTCTCCAGAGATGTAGGGTGTTCCAAATaGCTCCCAATACCCCAACTCTGCCATGTGTGGATGTCCTCAGGT | + |
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Preference number: 1 (lower is better) Translates to: RGSLEMFSRDVGCSK*LPIPQLCHVWMSSG Trigger: ACCTGAGGACATCCACACATGGCAGAGTTGGGGTATTGGGAGCCATTTGGAACACCCTACATCTCTGGAGAACATCTCTAGGCTACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
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| 3UTR GCA 90 bp | GGTGTCACAGATGGATTCCATAGGAACACATCGTCCTCAAGGGTTTaGATCATTCTCTCGGCAGAAGTGAAGGGACAGTCCCTGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: GVTDGFHRNTSSSRV*IILSAEVKGQSLRS Trigger: TGACCTCAGGGACTGTCCCTTCACTTCTGCCGAGAGAATGATGCAAACCCTTGAGGACGATGTGTTCCTATGGAATCCATCTGTGACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR TCA 90 bp | AGAAAGGGAGCATCTTGGGAAGGGAAACAAAGGTGGGCCATTCTTTaGAAGAAGGAAATGTGTGGTGCTTGGTCCCCAGGAATTACTGTC | + |
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Preference number: 1 (lower is better) Translates to: RKGASWEGKQRWAIL*KKEMCGAWSPGITV Trigger: GACAGTAATTCCTGGGGACCAAGCACCACACATTTCCTTCTTTCAAAGAATGGCCCACCTTTGTTTCCCTTCCCAAGATGCTCCCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
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| 3UTR GCA 90 bp | AGTTTCTTTGTATTGACCTCATCATGTACCACAGAACAGTGGGTTTaGAGGAAGTTGAGCAGGGGTAGCCTAGAGATGTTCTCCAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: SFFVLTSSCTTEQWV*RKLSRGSLEMFSRD Trigger: ATCTCTGGAGAACATCTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACATGATGAGGTCAATACAAAGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAACAGTGGGTTTGCAGGAAGTTGAGCAGGGGTAGCCTAGAGATGTTCTCCGCACTATCAGGCTGCTaGGGTGGGGGTGGGGGTCGG | + |
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Preference number: 2 (lower is better) Translates to: TEQWVCRKLSRGSLEMFSALSGC*GGGGGR Trigger: CCGACCCCCACCCCCACCCCAGCAGCCTGATAGTGC...GGAGAACATCTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCACTGTTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR CAA 90 bp | GTTTGGAGGCAGGGTGAGAGGGGAAGGGACTGTCAGGGACTGCCCTaGACATGGGTAATATGGGTCTGTGTCTTGGGAAGACAGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: VWRQGERGRDCQGLP*TWVIWVCVLGRQGL Trigger: GAGACCCTGTCTTCCCAAGACACAGACCCATATTACCCATGTCAAGGGCAGTCCCTGACAGTCCCTTCCCCTCTCACCCTGCCTCCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGACATGAGCATGTTCACTGTTTCTGCACTATCAGGCTGCTGGGGTGGGGGGTCGGGGTGTGTGTGTaGATGACACGGATCCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: RRHEHVHCFCTIRLLGWGVGVCV*MTRIPH Trigger: ATGAGGGATCCGTGTCATTCACACACACACCCCGAC...CCCCCACCCCAGCAGCCTGATAGTGCAGAAACAGTGAACATGCTCATGTCTTCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTATTGACCTCATCATGTACCACAGAACAGTGGGTTTGCAGGAAGTTGAGCGCACTATCAGGCTGCTaGGGTGGGGGTGGGGGTCGG | + |
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Preference number: 2 (lower is better) Translates to: FVLTSSCTTEQWVCRKLSALSGC*GGGGGR Trigger: CCGACCCCCACCCCCACCCCAGCAGCCTGATAGTGC...GCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACATGATGAGGTCAATACAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCAAAAATATTGTTGACAGGGACAGAGGTGTCACAGATGGATTCCATAGGGCACTATCAGGCTGCTaGGGTGGGGGTGGGGGTCGG | + |
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Preference number: 2 (lower is better) Translates to: SVKNIVDRDRGVTDGFHRALSGC*GGGGGR Trigger: CCGACCCCCACCCCCACCCCAGCAGCCTGATAGTGC...CCTATGGAATCCATCTGTGACACCTCTGTCCCTGTCAACAATATTTTTGACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGAGAAGTGGGGCATTGGCTTGTCCACCCAGGCAATGGGAAGAGTTTGGAGGACTGCCCTTGACATaGGTAATATGGGTCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: AERSGALACPPRQWEEFGGLPLT*VIWVCV Trigger: GACACAGACCCATATTACCCATGTCAAGGGCAGTCC...TCCAAACTCTTCCCATTGCCTGGGTGGACAAGCCAATGCCCCACTTCTCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTGAAGTTCTCGAGCATGGGATCTCCGGCCTaGACTCCCGAAGTTCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: CSWPDVSSSFCSNLKFSSMGSPA*TPEVLH Trigger: ATGCAGAACTTCGGGAGTTCAGGCCGGAGATCCCAT...GCTCGAGAACTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171580.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTTGGGAAGACAGGGTCTCGCTGCTGGCCTCCCTACTAGAAAGGGAGCATAGGTGGGCCATTCTTTaGAAGAAGGAAATGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: VSWEDRVSLLASLLEREHRWAIL*KKEMCG Trigger: ACCACACATTTCCTTCTTTCAAAGAATGGCCCACCT...ATGCTCCCTTTCTAGTAGGGAGGCCAGCAGCGAGACCCTGTCTTCCCAAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTTGGTCGTGTCACTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAATACCCCAACTCTaGCATGTGTGGATGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GSWSCHSALGLTYPLLSAPIPQL*HVWMSS Trigger: TGAGGACATCCACACATGGCAGAGTTGGGGTATTGG...AGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGACACGACCAAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGTTGAGCAGGGGTAGCCTAGAGATGTTCTCCAGAGATGTAGGGTGTTCCCCAATACCCCAACTCTaGCATGTGTGGATGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RKLSRGSLEMFSRDVGCSPIPQL*HVWMSS Trigger: TGAGGACATCCACACATGGCAGAGTTGGGGTATTGG...GGAACACCCTACATCTCTGGAGAACATCTCTAGGCTACCCCTGCTCAACTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTCTTGGGAAGACAGGGTCTCGCTGCTGGCCTCCCTACTAGAAAGGGAGCATGTATCCTCTTCTTTCTaGTCCAACTTGAAGTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: VSWEDRVSLLASLLEREHVSSSF*SNLKFS Trigger: CGAGAACTTCAAGTTGGAGCAGAAAGAAGAGGATAC...ATGCTCCCTTTCTAGTAGGGAGGCCAGCAGCGAGACCCTGTCTTCCCAAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171580.8 |
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| 3UTR-3UTR TCA 90 bp | CAAATGATGCTCAAGACAATCGTGACATCATCTAGCAAGCTGCAGAGAAGCAGGACGGATCCCTCATCCTaGTGCAGGAAGATGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: QMMLKTIVTSSSKLQRSRTDPSS*CRKMVG Trigger: ACCCACCATCTTCCTGCATCAGGATGAGGGATCCGT...CCTGCTTCTCTGCAGCTTGCTAGATGATGTCACGATTGTCTTGAGCATCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR TCA 90 bp | CAAATGATGCTCAAGACAATCGTGACATCATCTAGCAAGCTGCAGAGAAGCAGGGTCGGGGTGTGTGTGTaGATGACACGGATCCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: QMMLKTIVTSSSKLQRSRVGVCV*MTRIPH Trigger: ATGAGGGATCCGTGTCATTCACACACACACCCCGAC...CCTGCTTCTCTGCAGCTTGCTAGATGATGTCACGATTGTCTTGAGCATCATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR TCA 90 bp | ACTGCACTGCAATCGAGTCCTGCTGCTGTGCTCTCAACTGACCGAGAAGAGCTCTGTCAAAAATATTGTTaGCAGGGACAGAGGTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: TALQSSPAAVLSTDREELCQKYC*QGQRCH Trigger: GTGACACCTCTGTCCCTGTCAACAATATTTTTGACA...GAGCTCTTCTCGGTCAGTTGAGAGCACAGCAGCAGGACTCGATTGCAGTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR TCA 90 bp | ACAGAACAGTGGGTTTGCAGGAAGTTGAGCAGGGGTAGCCTAGAGATGTTCTCCGTAAAACCTCGTCCATaGAGTCCTGGGAACTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TEQWVCRKLSRGSLEMFSVKPRP*SPGNSL Trigger: AAGAGAGTTCCCAGGACTTCATGGACGAGGTTTTAC...GGAGAACATCTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCACTGTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGACTGTCAGGGACTGCCCTTGACATGGGTAATATGGGTCTGTGTCTTGAGGTGGGCCATTCTTTaGAAGAAGGAAATGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GRDCQGLPLTWVIWVCVLRWAIL*KKEMCG Trigger: ACCACACATTTCCTTCTTTCAAAGAATGGCCCACCT...CAAGACACAGACCCATATTACCCATGTCAAGGGCAGTCCCTGACAGTCCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTGAAGTTCTCGGTAGGGTGTTCCAAATaGCTCCCAATACCCCAACTC | + |
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Preference number: 2 (lower is better) Translates to: LCSWPDVSSSFCSNLKFSVGCSK*LPIPQL Trigger: GAGTTGGGGTATTGGGAGCCATTTGGAACACCCTAC...CGAGAACTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
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| 3UTR CAA 90 bp | GTATTGACCTCATCATGTACCACAGAACAGTGGGTTTGCAGGAAGTaGAGCAGGGGTAGCCTAGAGATGTTCTCCAGAGATGTAGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: VLTSSCTTEQWVCRK*SRGSLEMFSRDVGC Trigger: ACACCCTACATCTCTGGAGAACATCTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACATGATGAGGTCAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR CAA 90 bp | TGGTGGGGAACAGTAAGGTGTGTGTATAAGCAGATATGGCTACACTaGTCTTCACTGCACTGCAATCGAGTCCTGCTGCTGTGCTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: WWGTVRCVYKQIWLH*SSLHCNRVLLLCSQ Trigger: TTGAGAGCACAGCAGCAGGACTCGATTGCAGTGCAGTGAAGACAAGTGTAGCCATATCTGCTTATACACACACCTTACTGTTCCCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR TCA 90 bp | CTCTCAACTGACCGAGAAGAGCTCCCAAAACAGTTGGTGCTAGAAAAGCAAATTACGGATCCCTCATCCTaGTGCAGGAAGATGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LSTDREELPKQLVLEKQITDPSS*CRKMVG Trigger: ACCCACCATCTTCCTGCATCAGGATGAGGGATCCGT...AATTTGCTTTTCTAGCACCAACTGTTTTGGGAGCTCTTCTCGGTCAGTTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR TCA 90 bp | CTCTCAACTGACCGAGAAGAGCTCCCAAAACAGTTGGTGCTAGAAAAGCAAATTGTCGGGGTGTGTGTGTaGATGACACGGATCCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: LSTDREELPKQLVLEKQIVGVCV*MTRIPH Trigger: ATGAGGGATCCGTGTCATTCACACACACACCCCGAC...AATTTGCTTTTCTAGCACCAACTGTTTTGGGAGCTCTTCTCGGTCAGTTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR TCA 90 bp | AGAAGACATGAGCATGTTCACTGTTTCTGCACTATCAGGCTGCTGGGGTGGGGGTGTCAAAAATATTGTTaGCAGGGACAGAGGTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: RRHEHVHCFCTIRLLGWGCQKYC*QGQRCH Trigger: GTGACACCTCTGTCCCTGTCAACAATATTTTTGACA...CCCCCACCCCAGCAGCCTGATAGTGCAGAAACAGTGAACATGCTCATGTCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR TCA 90 bp | GTGTCACTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTGAAGGTAAAACCTCGTCCATaGAGTCCTGGGAACTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: VSLCSWPDVSSSFCSNLKVKPRP*SPGNSL Trigger: AAGAGAGTTCCCAGGACTTCATGGACGAGGTTTTAC...CTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169466.8 ENSMUST00000172053.8 |
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| 3UTR-3UTR GCA 90 bp | ATGATGCTCAAGACAATCGTGACATCATCTAGCAAGCTGCAGAGAAGCAGGGCACCAATACCCCAACTCTaGCATGTGTGGATGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: MMLKTIVTSSSKLQRSRAPIPQL*HVWMSS Trigger: TGAGGACATCCACACATGGCAGAGTTGGGGTATTGG...TGCCCTGCTTCTCTGCAGCTTGCTAGATGATGTCACGATTGTCTTGAGCATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR GCA 90 bp | ATGATGCTCAAGACAATCGTGACATCATCTAGCAAGCTGCAGAGAAGCAGGGCATTGTCTTCACTGCACTaGAATCGAGTCCTGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: MMLKTIVTSSSKLQRSRALSSLH*NRVLLL Trigger: CAGCAGCAGGACTCGATTGCAGTGCAGTGAAGACAA...TGCCCTGCTTCTCTGCAGCTTGCTAGATGATGTCACGATTGTCTTGAGCATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCTTTGTATTGACCTCATCATGTACCACAGAACAGTGGGTTTGCAGGAAGGGGTGTGTGTGTGAATaGCACGGATCCCTCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: SFFVLTSSCTTEQWVCRKGCVCE*HGSLIL Trigger: CAGGATGAGGGATCCGTGTCATTCACACACACACCC...CTTCCTGCAAACCCACTGTTCTGTGGTACATGATGAGGTCAATACAAAGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATGATGCTCAAGACAATCGTGACATCATCTAGCAAGCTGCAGAGAAGCAGGGTAGGGTGTTCCAAATaGCTCCCAATACCCCAACTC | + |
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Preference number: 2 (lower is better) Translates to: QMMLKTIVTSSSKLQRSRVGCSK*LPIPQL Trigger: GAGTTGGGGTATTGGGAGCCATTTGGAACACCCTAC...CCTGCTTCTCTGCAGCTTGCTAGATGATGTCACGATTGTCTTGAGCATCATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR CCA 90 bp | TGTATTGACCTCATCATGTACCACAGAACAGTGGGTTTGCAGGAAGTTGAGCAGGTAGGGTGTTCCAAATaGCTCCCAATACCCCAACTC | + |
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Preference number: 2 (lower is better) Translates to: CIDLIMYHRTVGLQEVEQVGCSK*LPIPQL Trigger: GAGTTGGGGTATTGGGAGCCATTTGGAACACCCTAC...CTGCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACATGATGAGGTCAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGACAGGGACAGAGGTGTCACAGATGGATTCCATAGGAACACATCGTCCTTGTACCACAGAACAGTaGGTTTGCAGGAAGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLTGTEVSQMDSIGTHRPCTTEQ*VCRKLS Trigger: GCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACA...AGGACGATGTGTTCCTATGGAATCCATCTGTGACACCTCTGTCCCTGTCAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGACAGAGGTGTCACAGATGGATTCCATAGGAACACATCGTCCTCAAGGGTCCCTGAGGTCAGTTTaGGAAGAAAGACAACAAACA | + |
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Preference number: 2 (lower is better) Translates to: TGTEVSQMDSIGTHRPQGSLRSV*EERQQT Trigger: TGTTTGTTGTCTTTCTTCCCAAACTGACCTCAGGGA...CCCTTGAGGACGATGTGTTCCTATGGAATCCATCTGTGACACCTCTGTCCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGTTGAGCAGGGGTAGCCTAGAGATGTTCTCCAGAGATGTAGGGTGTTCCCTAGTTTCTTTGTATTaGCCTCATCATGTACCACAG | + |
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Preference number: 2 (lower is better) Translates to: RKLSRGSLEMFSRDVGCSLVSLY*PHHVPQ Trigger: CTGTGGTACATGATGAGGTCAATACAAAGAAACTAG...GGAACACCCTACATCTCTGGAGAACATCTCTAGGCTACCCCTGCTCAACTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAACAGTGGGTTTGCAGGAAGTTGAGCAGGGGTAGCCTAGAGATGTTCTCCCTAGTTTCTTTGTATTaGCCTCATCATGTACCACAG | + |
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Preference number: 2 (lower is better) Translates to: TEQWVCRKLSRGSLEMFSLVSLY*PHHVPQ Trigger: CTGTGGTACATGATGAGGTCAATACAAAGAAACTAG...GGAGAACATCTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCACTGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTGAAGTTCTCGAGCCTAGTTTCTTTGTATTaGCCTCATCATGTACCACAG | + |
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Preference number: 2 (lower is better) Translates to: CSWPDVSSSFCSNLKFSSLVSLY*PHHVPQ Trigger: CTGTGGTACATGATGAGGTCAATACAAAGAAACTAG...GCTCGAGAACTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCAAAAATATTGTTGACAGGGACAGAGGTGTCACAGATGGATTCCATAGGTGTACCACAGAACAGTaGGTTTGCAGGAAGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SVKNIVDRDRGVTDGFHRCTTEQ*VCRKLS Trigger: GCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACA...CCTATGGAATCCATCTGTGACACCTCTGTCCCTGTCAACAATATTTTTGACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTCAAAAATATTGTTGACAGGGACAGAGGTGTCACAGATGGATTCCATATCCCTGAGGTCAGTTTaGGAAGAAAGACAACAAACA | + |
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Preference number: 2 (lower is better) Translates to: CLSKILLTGTEVSQMDSISLRSV*EERQQT Trigger: TGTTTGTTGTCTTTCTTCCCAAACTGACCTCAGGGA...TATGGAATCCATCTGTGACACCTCTGTCCCTGTCAACAATATTTTTGACAGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR GCA 72 bp | AGCTGCAGAGAAGCAGGGCAGCTCTTCCCTGCTGTCTaGTGCCACCCACAGAAGACGCAGTGCTTAACTCGC | + |
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Preference number: 3 (lower is better) Translates to: SCREAGQLFPAV*CHPQKTQCLTR Trigger: GCGAGTTAAGCACTGCGTCTTCTGTGGGTGGCAGCAGACAGCAGGGAAGAGCTGCCCTGCTTCTCTGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR-3UTR CAA 90 bp | ACTGCACTGCAATCGAGTCCTGCTGCTGTGCTCTCAACTGACCGAGAAGAGCTCTGGGTTTGCAGGAAGTaGAGCAGGGGTAGCCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: TALQSSPAAVLSTDREELWVCRK*SRGSLE Trigger: CTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCA...GAGCTCTTCTCGGTCAGTTGAGAGCACAGCAGCAGGACTCGATTGCAGTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| 3UTR CCA 72 bp | AGGGACTGTCAGGGACTGCCCTTGACATGGGTAATATaGGTCTGTGTCTTGGGAAGACAGGGTCTCGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: RDCQGLPLTWVI*VCVLGRQGLAA Trigger: AGCAGCGAGACCCTGTCTTCCCAAGACACAGACCCATATTACCCATGTCAAGGGCAGTCCCTGACAGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
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| 3UTR CCA 72 bp | GAGAGGGGAAGGGACTGTCAGGGACTGCCCTTGACATaGGTAATATGGGTCTGTGTCTTGGGAAGACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ERGRDCQGLPLT*VIWVCVLGRQG Trigger: ACCCTGTCTTCCCAAGACACAGACCCATATTACCCATGTCAAGGGCAGTCCCTGACAGTCCCTTCCCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTTGGTCGTGTCACTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTTGGGTTTGCAGGAAGTaGAGCAGGGGTAGCCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSWSCHSALGLTYPLLSAWVCRK*SRGSLE Trigger: CTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCA...AGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGACACGACCAAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
||
| 3UTR TCA 72 bp | ACTCGCCCTAGAGAGGTGGAGGAAGGCTTTCTACCCTaGGATGGAGGCAGTTTTTGTTCACGTGGTGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TRPREVEEGFLP*DGGSFCSRGGE Trigger: TTCCCCACCACGTGAACAAAAACTGCCTCCATCTCAGGGTAGAAAGCCTTCCTCCACCTCTCTAGGGCGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
||
| 3UTR CCA 72 bp | GAAGGAGATGGGCTCTTGGTCGTGTCACTCTGCTCTTaGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: EGDGLLVVSLCS*PDVSSSFCSNL Trigger: CAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGACACGACCAAGAGCCCATCTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTGACATGGGTAATATGGGTCTGTGTCTTGGGAAGACAGGGTCTCGCTGCTGGAAATGTGTGGTGCTaGGTCCCCAGGAATTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: PLTWVIWVCVLGRQGLAAGNVWC*VPRNYC Trigger: ACAGTAATTCCTGGGGACCAAGCACCACACATTTCC...AGCAGCGAGACCCTGTCTTCCCAAGACACAGACCCATATTACCCATGTCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGTGAGAGGGGAAGGGACTGTCAGGGACTGCCCTTGACATGGGTAATATGGAAGGTGGGCCATTCTTaGAAAGAAGGAAATGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QGERGRDCQGLPLTWVIWKVGHS*KEGNVW Trigger: CCACACATTTCCTTCTTTCAAAGAATGGCCCACCTT...CCATATTACCCATGTCAAGGGCAGTCCCTGACAGTCCCTTCCCCTCTCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| 3UTR-3UTR CAA 90 bp | CATAGGAACACATCGTCCTCAAGGGTTTGCATCATTCTCTCGGCAGAAGTGAAGTGGGTTTGCAGGAAGTaGAGCAGGGGTAGCCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HRNTSSSRVCIILSAEVKWVCRK*SRGSLE Trigger: CTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCA...CTTCACTTCTGCCGAGAGAATGATGCAAACCCTTGAGGACGATGTGTTCCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAGAGAAGTGGGGCATTGGCTTGTCCACCCAGGCAATGGGAAGAGTTTGGAAAGGTGGGCCATTCTTaGAAAGAAGGAAATGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: AERSGALACPPRQWEEFGKVGHS*KEGNVW Trigger: CCACACATTTCCTTCTTTCAAAGAATGGCCCACCTT...TCCAAACTCTTCCCATTGCCTGGGTGGACAAGCCAATGCCCCACTTCTCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| 3UTR GCA 72 bp | TTGTCTTCACTGCACTGCAATCGAGTCCTGCTGCTGTaGTCTCAACTGACCGAGAAGAGCTCCCAAAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSSLHCNRVLLL*SQLTEKSSQNS Trigger: ACTGTTTTGGGAGCTCTTCTCGGTCAGTTGAGAGCACAGCAGCAGGACTCGATTGCAGTGCAGTGAAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCACTGCAATCGAGTCCTGCTGCTGTGCTCTCAACTGACCGAGAAGAGCTCCTGTCAAAAATATTGTaGACAGGGACAGAGGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TALQSSPAAVLSTDREELLSKIL*TGTEVS Trigger: TGACACCTCTGTCCCTGTCAACAATATTTTTGACAG...GAGCTCTTCTCGGTCAGTTGAGAGCACAGCAGCAGGACTCGATTGCAGTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGCATTGGCTTGTCCACCCAGGCAATGGGAAGAGTTTGGAGGCAGGGTGAGAATCGAATAGCATCATaGAAGAGCTTCACAACATTG | + |
|
Preference number: 3 (lower is better) Translates to: WGIGLSTQAMGRVWRQGENRIAS*KSFTTL Trigger: CAATGTTGTGAAGCTCTTCAATGATGCTATTCGATT...CTCACCCTGCCTCCAAACTCTTCCCATTGCCTGGGTGGACAAGCCAATGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| 3UTR TCA 72 bp | AGATGGGCTCTTGGTCGTGTCACTCTGCTCTTGGCCTaGCGTATCCTCTTCTTTCTGCTCCAACTTGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RWALGRVTLLLA*RILFFLLQLEV Trigger: AACTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGACACGACCAAGAGCCCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169466.8 ENSMUST00000172053.8 |
||
| 3UTR TCA 72 bp | GCATCTTGGGAAGGGAAACAAAGGTGGGCCATTCTTTaGAAGAAGGAAATGTGTGGTGCTTGGTCCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ASWEGKQRWAIL*KKEMCGAWSPG Trigger: TCCTGGGGACCAAGCACCACACATTTCCTTCTTTCAAAGAATGGCCCACCTTTGTTTCCCTTCCCAAGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| 3UTR GCA 72 bp | GATGGATTCCATAGGAACACATCGTCCTCAAGGGTTTaGATCATTCTCTCGGCAGAAGTGAAGGGACAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DGFHRNTSSSRV*IILSAEVKGQS Trigger: GGACTGTCCCTTCACTTCTGCCGAGAGAATGATGCAAACCCTTGAGGACGATGTGTTCCTATGGAATCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
||
| 3UTR GCA 72 bp | AAGGTGGGCCATTCTTTGAAAGAAGGAAATGTGTGGTaGTTGGTCCCCAGGAATTACTGTCACCCAGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KVGHSLKEGNVW*LVPRNYCHPGA Trigger: TGCACCTGGGTGACAGTAATTCCTGGGGACCAAGCACCACACATTTCCTTCTTTCAAAGAATGGCCCACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| 3UTR CCA 72 bp | CTAGAGATGTTCTCCAGAGATGTAGGGTGTTCCAAATaGCTCCCAATACCCCAACTCTGCCATGTGTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LEMFSRDVGCSK*LPIPQLCHVWM Trigger: CATCCACACATGGCAGAGTTGGGGTATTGGGAGCCATTTGGAACACCCTACATCTCTGGAGAACATCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTGAAGTTCTCGAGCTCTTTCTGCTCCAACTaGAAGTTCTCGAGCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CSWPDVSSSFCSNLKFSSSFCSN*KFSSSC Trigger: ACAGGAGCTCGAGAACTTCAAGTTGGAGCAGAAAGA...GCTCGAGAACTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169466.8 ENSMUST00000171580.8 ENSMUST00000172053.8 |
||
| 3UTR GCA 72 bp | TATAAGCAGATATGGCTACACTTGTCTTCACTGCACTaGAATCGAGTCCTGCTGCTGTGCTCTCAACTGACC | + |
|
Preference number: 3 (lower is better) Translates to: YKQIWLHLSSLH*NRVLLLCSQLT Trigger: GGTCAGTTGAGAGCACAGCAGCAGGACTCGATTGCAGTGCAGTGAAGACAAGTGTAGCCATATCTGCTTATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
||
| 3UTR GCA 72 bp | TCACTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTaGTCCAACTTGAAGTTCTCGAGCTCCTGTAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: SLCSWPDVSSSF*SNLKFSSSCKT Trigger: GGTTTTACAGGAGCTCGAGAACTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169466.8 ENSMUST00000172053.8 |
||
| 3UTR CCA 72 bp | ACAAAGGTGGGCCATTCTTTGAAAGAAGGAAATGTGTaGTGCTTGGTCCCCAGGAATTACTGTCACCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TKVGHSLKEGNV*CLVPRNYCHPG Trigger: ACCTGGGTGACAGTAATTCCTGGGGACCAAGCACCACACATTTCCTTCTTTCAAAGAATGGCCCACCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGACATGAGCATGTTCACTGTTTCTGCACTATCAGGCTGCTGGGGTGGGGGTCTAGTTTCTTTGTATaGACCTCATCATGTACCACA | + |
|
Preference number: 3 (lower is better) Translates to: RRHEHVHCFCTIRLLGWGSSFFV*TSSCTT Trigger: TGTGGTACATGATGAGGTCAATACAAAGAAACTAGA...CCCCCACCCCAGCAGCCTGATAGTGCAGAAACAGTGAACATGCTCATGTCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
||
| 3UTR CCA 72 bp | TCTACCCTGAGATGGAGGCAGTTTTTGTTCACGTGGTaGGGAACAGTAAGGTGTGTGTATAAGCAGATATGG | + |
|
Preference number: 3 (lower is better) Translates to: STLRWRQFLFTW*GTVRCVYKQIW Trigger: CCATATCTGCTTATACACACACCTTACTGTTCCCCACCACGTGAACAAAAACTGCCTCCATCTCAGGGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTATTGACCTCATCATGTACCACAGAACAGTGGGTTTGCAGGAAGTTGAGCTCTTTCTGCTCCAACTaGAAGTTCTCGAGCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FVLTSSCTTEQWVCRKLSSFCSN*KFSSSC Trigger: ACAGGAGCTCGAGAACTTCAAGTTGGAGCAGAAAGA...GCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACATGATGAGGTCAATACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
||
| 3UTR TCA 72 bp | GATGGTGGGTATCACGCCTGTCTAGTTTCTTTGTATTaGCCTCATCATGTACCACAGAACAGTGGGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DGGYHACLVSLY*PHHVPQNSGFA Trigger: TGCAAACCCACTGTTCTGTGGTACATGATGAGGTCAATACAAAGAAACTAGACAGGCGTGATACCCACCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCACTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTGAAGAATCGAATAGCATCATaGAAGAGCTTCACAACATTG | + |
|
Preference number: 3 (lower is better) Translates to: VSLCSWPDVSSSFCSNLKNRIAS*KSFTTL Trigger: CAATGTTGTGAAGCTCTTCAATGATGCTATTCGATT...CTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169466.8 ENSMUST00000172053.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGATGCTCAAGACAATCGTGACATCATCTAGCAAGCTGCAGAGAAGCAGGGCATCTAGTTTCTTTGTATaGACCTCATCATGTACCACA | + |
|
Preference number: 3 (lower is better) Translates to: MMLKTIVTSSSKLQRSRASSFFV*TSSCTT Trigger: TGTGGTACATGATGAGGTCAATACAAAGAAACTAGA...TGCCCTGCTTCTCTGCAGCTTGCTAGATGATGTCACGATTGTCTTGAGCATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGGAAGGGAAACAAAGGTGGGCCATTCTTTGAAAGAAGGAAATGTGTGGTGAATCGAATAGCATCATaGAAGAGCTTCACAACATTG | + |
|
Preference number: 3 (lower is better) Translates to: LGKGNKGGPFFERRKCVVNRIAS*KSFTTL Trigger: CAATGTTGTGAAGCTCTTCAATGATGCTATTCGATT...CACCACACATTTCCTTCTTTCAAAGAATGGCCCACCTTTGTTTCCCTTCCCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTATTGACCTCATCATGTACCACAGAACAGTGGGTTTGCAGGAAGTTGAGCAATCGAATAGCATCATaGAAGAGCTTCACAACATTG | + |
|
Preference number: 3 (lower is better) Translates to: FVLTSSCTTEQWVCRKLSNRIAS*KSFTTL Trigger: CAATGTTGTGAAGCTCTTCAATGATGCTATTCGATT...GCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACATGATGAGGTCAATACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTGACATGGGTAATATGGGTCTGTGTCTTGGGAAGACAGGGTCTCGCTGCTTGCTCCAGCTCACAGTaGCTGTTTCTGTCCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLTWVIWVCVLGRQGLAACSSSQ*LFLSPA Trigger: GGCAGGGGACAGAAACAGGCACTGTGAGCTGGAGCA...AGCAGCGAGACCCTGTCTTCCCAAGACACAGACCCATATTACCCATGTCAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTGAGAGGGGAAGGGACTGTCAGGGACTGCCCTTGACATGGGTAATATGGCCACAAGGATCGTCTTaGCGTCTACTGTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGERGRDCQGLPLTWVIWPQGSS*RLLWLC Trigger: ACACAGCCACAGTAGACGGCAAGACGATCCTTGTGG...CCATATTACCCATGTCAAGGGCAGTCCCTGACAGTCCCTTCCCCTCTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170126.2 |
||
| 3UTR CAA 72 bp | CAGGGTGAGAGGGGAAGGGACTGTCAGGGACTGCCCTaGACATGGGTAATATGGGTCTGTGTCTTGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGERGRDCQGLP*TWVIWVCVLGR Trigger: TCTTCCCAAGACACAGACCCATATTACCCATGTCAAGGGCAGTCCCTGACAGTCCCTTCCCCTCTCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTGAAGTTCTCGAGCTGCTCCAGCTCACAGTaGCTGTTTCTGTCCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSWPDVSSSFCSNLKFSSCSSSQ*LFLSPA Trigger: GGCAGGGGACAGAAACAGGCACTGTGAGCTGGAGCA...GCTCGAGAACTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169466.8 ENSMUST00000171580.8 ENSMUST00000172053.8 |
||
| CDS-3UTR GCA 90 bp | TATGGGTCTGTGTCTTGGGAAGACAGGGTCTCGCTGCTGGCCTCCCTACTAGAAGCATATGTGGACAGTTaGTGTGGCTGGAATCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: YGSVSWEDRVSLLASLLEAYVDS*CGWNPS Trigger: GGATGGATTCCAGCCACAGCAACTGTCCACATATGC...TTCTAGTAGGGAGGCCAGCAGCGAGACCCTGTCTTCCCAAGACACAGACCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170126.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGGGGCATTGGCTTGTCCACCCAGGCAATGGGAAGAGTTTGGAGGCAGGATCTTCACGTTCTCATaGGTGTCGTACTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSGALACPPRQWEEFGGRIFTFS*VSYFSC Trigger: GCAGGAGAAGTACGACACCCATGAGAACGTGAAGAT...CCTGCCTCCAAACTCTTCCCATTGCCTGGGTGGACAAGCCAATGCCCCACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCACTGCAATCGAGTCCTGCTGCTGTGCTCTCAACTGACCGAGAAGAGCTCGTAAAACCTCGTCCATaGAGTCCTGGGAACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TALQSSPAAVLSTDREELVKPRP*SPGNSL Trigger: AAGAGAGTTCCCAGGACTTCATGGACGAGGTTTTAC...GAGCTCTTCTCGGTCAGTTGAGAGCACAGCAGCAGGACTCGATTGCAGTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
||
| CDS-3UTR GCA 90 bp | TCACTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTGAAGTTCTGCTCCAGCTCACAGTaGCTGTTTCTGTCCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCSWPDVSSSFCSNLKFCSSSQ*LFLSPA Trigger: GGCAGGGGACAGAAACAGGCACTGTGAGCTGGAGCA...GAACTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169466.8 ENSMUST00000172053.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGAGAAGTGGGGCATTGGCTTGTCCACCCAGGCAATGGGAAGAGTTTGGAATCTTCACGTTCTCATaGGTGTCGTACTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AERSGALACPPRQWEEFGIFTFS*VSYFSC Trigger: GCAGGAGAAGTACGACACCCATGAGAACGTGAAGAT...TCCAAACTCTTCCCATTGCCTGGGTGGACAAGCCAATGCCCCACTTCTCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTGAGAGGGGAAGGGACTGTCAGGGACTGCCCTTGACATGGGTAATATGGGACAGTTGCTGTGGCTaGAATCCATCCATGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGERGRDCQGLPLTWVIWDSCCG*NPSMRN Trigger: ATTTCTCATGGATGGATTCCAGCCACAGCAACTGTC...CCATATTACCCATGTCAAGGGCAGTCCCTGACAGTCCCTTCCCCTCTCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170126.2 |
||
| CDS-3UTR TCA 90 bp | CATAGGAACACATCGTCCTCAAGGGTTTGCATCATTCTCTCGGCAGAAGTGAAGATGGGATCTCCGGCCTaGACTCCCGAAGTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRNTSSSRVCIILSAEVKMGSPA*TPEVLH Trigger: ATGCAGAACTTCGGGAGTTCAGGCCGGAGATCCCAT...CTTCACTTCTGCCGAGAGAATGATGCAAACCCTTGAGGACGATGTGTTCCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023294.15 |
||
| CDS-3UTR GCA 90 bp | TGGTCGTGTCACTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTGCATATGTGGACAGTTaGTGTGGCTGGAATCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: WSCHSALGLTYPLLSAPTAYVDS*CGWNPS Trigger: GGATGGATTCCAGCCACAGCAACTGTCCACATATGC...AGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGACACGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTGAAGTTCTCGCCACAAGGATCGTCTTaGCGTCTACTGTGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCSWPDVSSSFCSNLKFSPQGSS*RLLWLC Trigger: ACACAGCCACAGTAGACGGCAAGACGATCCTTGTGG...CGAGAACTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTCTCCAGAGATGTAGGGTGTTCCAAATGGCTCCCAATACCCCAACTCTGCTCAAATACTTGGACTTaGCCACCGCACTGTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MFSRDVGCSKWLPIPQLCSNTWT*PPHCPP Trigger: TGGGGGACAGTGCGGTGGGCAAGTCCAAGTATTTGA...GCAGAGTTGGGGTATTGGGAGCCATTTGGAACACCCTACATCTCTGGAGAACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094056.12 |
||
| CDS-3UTR CCA 90 bp | AGGGTGTTCCAAATGGCTCCCAATACCCCAACTCTGCCATGTGTGGATGTCCTCATCTTCACGTTCTCATaGGTGTCGTACTTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVFQMAPNTPTLPCVDVLIFTFS*VSYFSC Trigger: GCAGGAGAAGTACGACACCCATGAGAACGTGAAGAT...GAGGACATCCACACATGGCAGAGTTGGGGTATTGGGAGCCATTTGGAACACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGACAGAGGTGTCACAGATGGATTCCATAGGAACACATCGTCCTCAAGGGGTAAAACCTCGTCCATaGAGTCCTGGGAACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGTEVSQMDSIGTHRPQGVKPRP*SPGNSL Trigger: AAGAGAGTTCCCAGGACTTCATGGACGAGGTTTTAC...CCCTTGAGGACGATGTGTTCCTATGGAATCCATCTGTGACACCTCTGTCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
||
| CDS-3UTR GCA 90 bp | GGTGTTCCAAATGGCTCCCAATACCCCAACTCTGCCATGTGTGGATGTCCTCAGTCTACTGTGGCTGTGTaGTTATACAGAGTCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVPNGSQYPNSAMCGCPQSTVAV*LYRVRA Trigger: TGCTCTGACTCTGTATAAGCACACAGCCACAGTAGA...CTGAGGACATCCACACATGGCAGAGTTGGGGTATTGGGAGCCATTTGGAACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000172053.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTGACATGGGTAATATGGGTCTGTGTCTTGGGAAGACAGGGTCTCGCTGCTTCTACTGTGGCTGTGTaGTTATACAGAGTCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLTWVIWVCVLGRQGLAASTVAV*LYRVRA Trigger: TGCTCTGACTCTGTATAAGCACACAGCCACAGTAGA...AGCAGCGAGACCCTGTCTTCCCAAGACACAGACCCATATTACCCATGTCAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170126.2 |
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| CDS-3UTR CCA 90 bp | TGTACCACAGAACAGTGGGTTTGCAGGAAGTTGAGCAGGGGTAGCCTAGAGATGATCTTCACGTTCTCATaGGTGTCGTACTTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: CTTEQWVCRKLSRGSLEMIFTFS*VSYFSC Trigger: GCAGGAGAAGTACGACACCCATGAGAACGTGAAGAT...CATCTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| 3UTR CAA 72 bp | AGCATCTTGGGAAGGGAAACAAAGGTGGGCCATTCTTaGAAAGAAGGAAATGTGTGGTGCTTGGTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SILGRETKVGHS*KEGNVWCLVPR Trigger: CCTGGGGACCAAGCACCACACATTTCCTTCTTTCAAAGAATGGCCCACCTTTGTTTCCCTTCCCAAGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170126.2 ENSMUST00000171580.8 |
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| CDS-3UTR TCA 90 bp | AGAAGACATGAGCATGTTCACTGTTTCTGCACTATCAGGCTGCTGGGGTGGGGGCCAGGTTCTTATAGGTaGTTTTCCTCTGGACATCAA | + |
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Preference number: 4 (lower is better) Translates to: RRHEHVHCFCTIRLLGWGPGSYR*FSSGHQ Trigger: TTGATGTCCAGAGGAAAATCACCTATAAGAACCTGG...CCCCCACCCCAGCAGCCTGATAGTGCAGAAACAGTGAACATGCTCATGTCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| CDS-3UTR GCA 90 bp | TGGTCGTGTCACTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTCTACTGTGGCTGTGTaGTTATACAGAGTCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: WSCHSALGLTYPLLSAPTSTVAV*LYRVRA Trigger: TGCTCTGACTCTGTATAAGCACACAGCCACAGTAGA...AGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGACACGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172053.8 |
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| CDS-3UTR GCA 90 bp | AGGGTGTTCCAAATGGCTCCCAATACCCCAACTCTGCCATGTGTGGATGTCCTCGTATCCTCTTCTTTCTaGTCCAACTTGAAGTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: RVFQMAPNTPTLPCVDVLVSSSF*SNLKFS Trigger: CGAGAACTTCAAGTTGGAGCAGAAAGAAGAGGATAC...GAGGACATCCACACATGGCAGAGTTGGGGTATTGGGAGCCATTTGGAACACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| CDS-3UTR GCA 90 bp | AGGGTGTTCCAAATGGCTCCCAATACCCCAACTCTGCCATGTGTGGATGTCCTCAGTCATCTGTATGTCTaGAGGTACCCAGGTTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: RVFQMAPNTPTLPCVDVLSHLYV*RYPGSY Trigger: ATAAGAACCTGGGTACCTGCAGACATACAGATGACT...GAGGACATCCACACATGGCAGAGTTGGGGTATTGGGAGCCATTTGGAACACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094056.12 |
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| 3UTR CAA 72 bp | TCATCATGTACCACAGAACAGTGGGTTTGCAGGAAGTaGAGCAGGGGTAGCCTAGAGATGTTCTCCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: SSCTTEQWVCRK*SRGSLEMFSRD Trigger: ATCTCTGGAGAACATCTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACATGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| CDS-3UTR TCA 90 bp | TGTACCACAGAACAGTGGGTTTGCAGGAAGTTGAGCAGGGGTAGCCTAGAGATGCCAGGTTCTTATAGGTaGTTTTCCTCTGGACATCAA | + |
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Preference number: 4 (lower is better) Translates to: CTTEQWVCRKLSRGSLEMPGSYR*FSSGHQ Trigger: TTGATGTCCAGAGGAAAATCACCTATAAGAACCTGG...CATCTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCACTGTTCTGTGGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| CDS-3UTR GCA 90 bp | CCTAAATGTCTACTAAGAAGACATGAGCATGTTCACTGTTTCTGCACTATCAGGTGCTCCAGCTCACAGTaGCTGTTTCTGTCCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PKCLLRRHEHVHCFCTIRCSSSQ*LFLSPA Trigger: GGCAGGGGACAGAAACAGGCACTGTGAGCTGGAGCA...CCTGATAGTGCAGAAACAGTGAACATGCTCATGTCTTCTTAGTAGACATTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| CDS-3UTR CCA 90 bp | TCACTCTGCTCTTGGCCTGACGTATCCTCTTCTTTCTGCTCCAACTTGAAGTTCATCTTCACGTTCTCATaGGTGTCGTACTTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLCSWPDVSSSFCSNLKFIFTFS*VSYFSC Trigger: GCAGGAGAAGTACGACACCCATGAGAACGTGAAGAT...GAACTTCAAGTTGGAGCAGAAAGAAGAGGATACGTCAGGCCAAGAGCAGAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169466.8 ENSMUST00000172053.8 |
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| CDS-3UTR CCA 90 bp | GATGTTCTCCAGAGATGTAGGGTGTTCCAAATGGCTCCCAATACCCCAACTCTGGACAGTTGCTGTGGCTaGAATCCATCCATGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: DVLQRCRVFQMAPNTPTLDSCCG*NPSMRN Trigger: ATTTCTCATGGATGGATTCCAGCCACAGCAACTGTC...CAGAGTTGGGGTATTGGGAGCCATTTGGAACACCCTACATCTCTGGAGAACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000172053.8 |
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| CDS-3UTR GCA 90 bp | ACACCTAAATGTCTACTAAGAAGACATGAGCATGTTCACTGTTTCTGCACTATCTGCTCCAGCTCACAGTaGCTGTTTCTGTCCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TPKCLLRRHEHVHCFCTICSSSQ*LFLSPA Trigger: GGCAGGGGACAGAAACAGGCACTGTGAGCTGGAGCA...GATAGTGCAGAAACAGTGAACATGCTCATGTCTTCTTAGTAGACATTTAGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 ENSMUST00000172053.8 |
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| CDS-3UTR GCA 90 bp | TGTCTGTCAAAAATATTGTTGACAGGGACAGAGGTGTCACAGATGGATTCCATACCACAAGGATCGTCTTaGCGTCTACTGTGGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: CLSKILLTGTEVSQMDSIPQGSS*RLLWLC Trigger: ACACAGCCACAGTAGACGGCAAGACGATCCTTGTGG...TATGGAATCCATCTGTGACACCTCTGTCCCTGTCAACAATATTTTTGACAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023294.15 |
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| CDS-3UTR GCA 90 bp | ATGGATTCCATAGGAACACATCGTCCTCAAGGGTTTGCATCATTCTCTCGGCAGGTATCCTCTTCTTTCTaGTCCAACTTGAAGTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: MDSIGTHRPQGFASFSRQVSSSF*SNLKFS Trigger: CGAGAACTTCAAGTTGGAGCAGAAAGAAGAGGATAC...CTGCCGAGAGAATGATGCAAACCCTTGAGGACGATGTGTTCCTATGGAATCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| CDS-3UTR GCA 90 bp | TGTCTGTCAAAAATATTGTTGACAGGGACAGAGGTGTCACAGATGGATTCCATAGCATATGTGGACAGTTaGTGTGGCTGGAATCCATCC | + |
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Preference number: 4 (lower is better) Translates to: CLSKILLTGTEVSQMDSIAYVDS*CGWNPS Trigger: GGATGGATTCCAGCCACAGCAACTGTCCACATATGC...TATGGAATCCATCTGTGACACCTCTGTCCCTGTCAACAATATTTTTGACAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023294.15 |
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| CDS-3UTR GCA 90 bp | ATGGATTCCATAGGAACACATCGTCCTCAAGGGTTTGCATCATTCTCTCGGCAGAGTCATCTGTATGTCTaGATCAATTTTATTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: MDSIGTHRPQGFASFSRQSHLYV*INFIGH Trigger: GTGGCCAATAAAATTGATGCAGACATACAGATGACT...CTGCCGAGAGAATGATGCAAACCCTTGAGGACGATGTGTTCCTATGGAATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023294.15 |
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| CDS-3UTR CCA 90 bp | CCTAAATGTCTACTAAGAAGACATGAGCATGTTCACTGTTTCTGCACTATCAGGGACAGTTGCTGTGGCTaGAATCCATCCATGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: PKCLLRRHEHVHCFCTIRDSCCG*NPSMRN Trigger: ATTTCTCATGGATGGATTCCAGCCACAGCAACTGTC...CCTGATAGTGCAGAAACAGTGAACATGCTCATGTCTTCTTAGTAGACATTTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000172053.8 |
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| 3UTR CAA 72 bp | AAATTTGGAATTAATGGTTGTCTGTCAAAAATATTGTaGACAGGGACAGAGGTGTCACAGATGGATTCCATA | + |
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Preference number: 4 (lower is better) Translates to: KFGINGCLSKIL*TGTEVSQMDSI Trigger: TATGGAATCCATCTGTGACACCTCTGTCCCTGTCAACAATATTTTTGACAGACAACCATTAATTCCAAATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| CDS-3UTR CAA 90 bp | AGAGAAGTGGGGCATTGGCTTGTCCACCCAGGCAATGGGAAGAGTTTGGAGGCAAGCATATGTGGACAGTaGCTGTGGCTGGAATCCATC | + |
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Preference number: 5 (lower is better) Translates to: REVGHWLVHPGNGKSLEASICGQ*LWLESI Trigger: GATGGATTCCAGCCACAGCAACTGTCCACATATGCT...TGCCTCCAAACTCTTCCCATTGCCTGGGTGGACAAGCCAATGCCCCACTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170126.2 |
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| CDS-3UTR CAA 90 bp | ACAGAACAGTGGGTTTGCAGGAAGTTGAGCAGGGGTAGCCTAGAGATGTTCTCCAGCATATGTGGACAGTaGCTGTGGCTGGAATCCATC | + |
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Preference number: 5 (lower is better) Translates to: TEQWVCRKLSRGSLEMFSSICGQ*LWLESI Trigger: GATGGATTCCAGCCACAGCAACTGTCCACATATGCT...GGAGAACATCTCTAGGCTACCCCTGCTCAACTTCCTGCAAACCCACTGTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000172053.8 |
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| CDS-3UTR CAA 90 bp | GATGTTCTCCAGAGATGTAGGGTGTTCCAAATGGCTCCCAATACCCCAACTCTGAGCATATGTGGACAGTaGCTGTGGCTGGAATCCATC | + |
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Preference number: 5 (lower is better) Translates to: DVLQRCRVFQMAPNTPTLSICGQ*LWLESI Trigger: GATGGATTCCAGCCACAGCAACTGTCCACATATGCT...CAGAGTTGGGGTATTGGGAGCCATTTGGAACACCCTACATCTCTGGAGAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000172053.8 |
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| CDS-3UTR CAA 90 bp | ACAGGGACAGAGGTGTCACAGATGGATTCCATAGGAACACATCGTCCTCAAGGGTCTTTCTGCTCCAACTaGAAGTTCTCGAGCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: TGTEVSQMDSIGTHRPQGSFCSN*KFSSSC Trigger: ACAGGAGCTCGAGAACTTCAAGTTGGAGCAGAAAGA...CCCTTGAGGACGATGTGTTCCTATGGAATCCATCTGTGACACCTCTGTCCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| CDS-3UTR CAA 90 bp | TTGTTGACAGGGACAGAGGTGTCACAGATGGATTCCATAGGAACACATCGTCCTTCTTTCTGCTCCAACTaGAAGTTCTCGAGCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: LLTGTEVSQMDSIGTHRPSFCSN*KFSSSC Trigger: ACAGGAGCTCGAGAACTTCAAGTTGGAGCAGAAAGA...AGGACGATGTGTTCCTATGGAATCCATCTGTGACACCTCTGTCCCTGTCAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| CDS-3UTR CAA 90 bp | ACAGGGACAGAGGTGTCACAGATGGATTCCATAGGAACACATCGTCCTCAAGGGAATCGAATAGCATCATaGAAGAGCTTCACAACATTG | + |
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Preference number: 5 (lower is better) Translates to: TGTEVSQMDSIGTHRPQGNRIAS*KSFTTL Trigger: CAATGTTGTGAAGCTCTTCAATGATGCTATTCGATT...CCCTTGAGGACGATGTGTTCCTATGGAATCCATCTGTGACACCTCTGTCCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| CDS-3UTR CAA 90 bp | ATGTTCTCCAGAGATGTAGGGTGTTCCAAATGGCTCCCAATACCCCAACTCTGCAATCGAATAGCATCATaGAAGAGCTTCACAACATTG | + |
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Preference number: 5 (lower is better) Translates to: MFSRDVGCSKWLPIPQLCNRIAS*KSFTTL Trigger: CAATGTTGTGAAGCTCTTCAATGATGCTATTCGATT...GCAGAGTTGGGGTATTGGGAGCCATTTGGAACACCCTACATCTCTGGAGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023294.15 ENSMUST00000094056.12 |
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| CDS GCA 72 bp | GTGTGCTTATACAGAGTCAGAGCATATGTGGACAGTTaGTGTGGCTGGAATCCATCCATGAGAAATCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VCLYRVRAYVDS*CGWNPSMRNLS Trigger: GGAGAGATTTCTCATGGATGGATTCCAGCCACAGCAACTGTCCACATATGCTCTGACTCTGTATAAGCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023294.15 ENSMUST00000170126.2 ENSMUST00000172053.8 |
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