Pregenerated sensors for RABGGTB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038975Ensembl transcript IDs: ENSMUST00000089950.11, ENSMUST00000167111.6, ENSMUST00000196266.5, ENSMUST00000196565.5, ENSMUST00000196956.5, ENSMUST00000197438.5, ENSMUST00000197829.5, ENSMUST00000198094.2, ENSMUST00000198350.5, ENSMUST00000200209.5, ENSMUST00000200631.5
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGGTAACTTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTaGCGCTCACAAAGCCACCAACCAAGTAGGTCGGAGTTCACTTGG | + |
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Preference number: 1 (lower is better) Translates to: SGNFSGLPLSPPEGN*RSQSHQPSRSEFTW Trigger: CCAAGTGAACTCCGACCTACTTGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAAGTTACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000197829.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR GCA 90 bp | AGCACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTaGTCTTCTCCCAGAAGTGACAACCCAGCAATGCCAAATAAGGTA | + |
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Preference number: 1 (lower is better) Translates to: STSSGIQKTGLTGLI*SSPRSDNPAMPNKV Trigger: TACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGGAGAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR TCA 90 bp | GTCTGTCTGCAAATCCTCCCGTCTCTTCATCTTGACACGCTAAGATaGAACTTCGAAGCTTTTCTCTGTCAATCCAATGAAGTCTCCCGA | + |
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Preference number: 1 (lower is better) Translates to: VCLQILPSLHLDTLR*NFEAFLCQSNEVSR Trigger: TCGGGAGACTTCATTGGATTGACAGAGAAAAGCTTCGAAGTTTCATCTTAGCGTGTCAAGATGAAGAGACGGGAGGATTTGCAGACAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR GCA 90 bp | ACGTCTAGGTTTGATAAACACTTCAAATACAGCAGTAATTCATATTaGACACTACAGCATCTCTCCCATCTGACTAGCTCACTAGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: TSRFDKHFKYSSNSY*TLQHLSHLTSSLAQ Trigger: CTGAGCTAGTGAGCTAGTCAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTGTTTATCAAACCTAGACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCACCAACCAGAATCCTGCCCAGCGTaGGATTCAGAGCCTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: GLPLSPPEGNCRSQSHQPESCPA*DSEPGL Trigger: CAGACCAGGCTCTGAATCTCACGCTGGGCAGGATTC...TGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000197438.5 ENSMUST00000197829.5 ENSMUST00000198350.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCACTTTAGTGTGGTGTGCTaGCAAGCCAGCACGGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: FSGLPLSPPEGNCRSQSHFSVVC*QASTGH Trigger: ATGCCCCGTGCTGGCTTGTCAGCACACCACACTAAA...GTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCACCAACCATGGACATTCACCCTCTaGAGCACCTCTTCTGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: GLPLSPPEGNCRSQSHQPWTFTL*STSSGI Trigger: TATGCCAGAAGAGGTGCTTCAGAGGGTGAATGTCCA...TGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR TCA 90 bp | AGCACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCTTCTCGGGTCTTCCATTaGGTCCGCCTGAGGGCAACT | + |
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Preference number: 2 (lower is better) Translates to: STSSGIQKTGLTGLICSSSRVFH*VRLRAT Trigger: AGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGA...AGAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR CCA 90 bp | GGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCACCAACCACCTTATCTTTTAGTGTaGTGTGCTGACAAGCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GLPLSPPEGNCRSQSHQPPYLLV*CADKPA Trigger: TGCTGGCTTGTCAGCACACCACACTAAAAGATAAGG...TGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| 3UTR-3UTR TCA 90 bp | AAGCACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCTTTAGTGTGGTGTGCTaGCAAGCCAGCACGGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: KHLFWHTEDRANRLDLLFFSVVC*QASTGH Trigger: ATGCCCCGTGCTGGCTTGTCAGCACACCACACTAAA...GAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTCTTCTCCCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGCCGCCTGAGGGCAACTaGCGCTCACAAAGCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: SALLPEVTTQQCQIRYERPPEGN*RSQSHQ Trigger: TTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGG...CCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGGAGAAGAGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGATCTGCTCTTCTCCCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATTTAGTGTGGTGTGCTaGCAAGCCAGCACGGGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GLICSSPRSDNPAMPNKVFSVVC*QASTGH Trigger: ATGCCCCGTGCTGGCTTGTCAGCACACCACACTAAA...TACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGGAGAAGAGCAGATCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATTTAGTGTGGTGTGCTaGCAAGCCAGCACGGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LPEVTTQQCQIRYERDPPFSVVC*QASTGH Trigger: ATGCCCCGTGCTGGCTTGTCAGCACACCACACTAAA...TGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCACCAACCAATGCCAAATAAGGTATaGAAGGGATCCACCATATCT | + |
|
Preference number: 2 (lower is better) Translates to: GLPLSPPEGNCRSQSHQPMPNKV*KGSTIS Trigger: AGATATGGTGGATCCCTTTCATACCTTATTTGGCAT...TGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR TCA 90 bp | GAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATATCTCTCTCGGGTCTTCCATTaGGTCCGCCTGAGGGCAACT | + |
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Preference number: 2 (lower is better) Translates to: EVTTQQCQIRYERDPPYLSRVFH*VRLRAT Trigger: AGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGA...GAGATATGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR GCA 90 bp | GGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCACCAACCACACCATCAAAGTTCATaGAGGACAAAACAAACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: GLPLSPPEGNCRSQSHQPHHQSS*RTKQTQ Trigger: TTGAGTTTGTTTTGTCCTGCATGAACTTTGATGGTG...TGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000197829.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR GCA 90 bp | AGCACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCTGTGACAACCCAGCAATaGCAAATAAGGTATGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: STSSGIQKTGLTGLICSSVTTQQ*QIRYER Trigger: CCTTTCATACCTTATTTGGCATTGCTGGGTTGTCAC...AGAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR CCA 90 bp | AGCACTGAGCGTGTACAGAAGGTGGGGGTCGTGCCCAATGCTAGCACTTATTCCAGGACTAACAAAAACTaGACTCAGAAGACTAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: STERVQKVGVVPNASTYSRTNKN*TQKTKD Trigger: ATCTTTAGTCTTCTGAGTCCAGTTTTTGTTAGTCCT...GGAATAAGTGCTAGCATTGGGCACGACCCCCACCTTCTGTACACGCTCAGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000196565.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATATATCCACCATATCTCCTaGTCTGTCTGCAAATCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PEVTTQQCQIRYERDPPYIHHIS*SVCKSS Trigger: GGAGGATTTGCAGACAGACCAGGAGATATGGTGGAT...ATATGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATATCTCCCTTATCTTTTAGTGTaGTGTGCTGACAAGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: EVTTQQCQIRYERDPPYLPYLLV*CADKPA Trigger: TGCTGGCTTGTCAGCACACCACACTAAAAGATAAGG...GAGATATGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATATTACAGAGTAAGAATCTaGACAGCACTGAGCGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: PEVTTQQCQIRYERDPPYYRVRI*TALSVY Trigger: GTACACGCTCAGTGCTGTCCAGATTCTTACTCTGTA...ATATGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196565.5 |
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| 3UTR-3UTR CCA 90 bp | AGCACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCTGCTTTAACTATCCTCTaGCTCTTCATTGAAACCAAA | + |
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Preference number: 2 (lower is better) Translates to: STSSGIQKTGLTGLICSSALTIL*LFIETK Trigger: TTTGGTTTCAATGAAGAGCCAGAGGATAGTTAAAGC...AGAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197438.5 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCACACCATCAAAGTTCATaGAGGACAAAACAAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: LPEVTTQQCQIRYERDPPHHQSS*RTKQTQ Trigger: TTGAGTTTGTTTTGTCCTGCATGAACTTTGATGGTG...TGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR CCA 90 bp | AAGCACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCAGGACTAACAAAAACTaGACTCAGAAGACTAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: KHLFWHTEDRANRLDLLFRTNKN*TQKTKD Trigger: ATCTTTAGTCTTCTGAGTCCAGTTTTTGTTAGTCCT...GAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATATCACCATCAAAGTTCATaGAGGACAAAACAAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: PEVTTQQCQIRYERDPPYHHQSS*RTKQTQ Trigger: TTGAGTTTGTTTTGTCCTGCATGAACTTTGATGGTG...ATATGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCAAGGACTAACAAAAACTaGACTCAGAAGACTAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: QKSLSIIDCYTTIGHGEARTNKN*TQKTKD Trigger: ATCTTTAGTCTTCTGAGTCCAGTTTTTGTTAGTCCT...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 |
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| 3UTR-3UTR CAA 90 bp | GGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCACCAACCAGCGGGTGTCACAGGTTaGTCCTGGATCAGAGTCACC | + |
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Preference number: 3 (lower is better) Translates to: GLPLSPPEGNCRSQSHQPAGVTG*SWIRVT Trigger: GGTGACTCTGATCCAGGACAAACCTGTGACACCCGC...TGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197438.5 |
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| 3UTR GCA 72 bp | TTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTaGCGCTCACAAAGCCACCAACCAAGTAGGTCGGAG | + |
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Preference number: 3 (lower is better) Translates to: FSGLPLSPPEGN*RSQSHQPSRSE Trigger: CTCCGACCTACTTGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000197829.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR CAA 90 bp | ACAGCACTGAGCGTGTACAGAAGGTGGGGGTCGTGCCCAATGCTAGCACTTATTTTCTCGGGTCTTCCATaGAGTCCGCCTGAGGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: TALSVYRRWGSCPMLALIFSGLP*SPPEGN Trigger: GTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAA...AATAAGTGCTAGCATTGGGCACGACCCCCACCTTCTGTACACGCTCAGTGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196565.5 |
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| 3UTR TCA 72 bp | CACCAACCAAGTAGGTCGGAGTTCACTTGGTGCAACTaGCTAGTTATGGCCAGGAATCCTGCCCAGCGTGAG | + |
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Preference number: 3 (lower is better) Translates to: HQPSRSEFTWCN*LVMARNPAQRE Trigger: CTCACGCTGGGCAGGATTCCTGGCCATAACTAGTCAGTTGCACCAAGTGAACTCCGACCTACTTGGTTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000197438.5 ENSMUST00000197829.5 ENSMUST00000198350.5 |
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| 3UTR TCA 72 bp | AATAGCACACATCTGGTAACTTCTCGGGTCTTCCATTaGGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: NSTHLVTSRVFH*VRLRATAAHKA Trigger: GGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAAGTTACCAGATGTGTGCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000197829.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGGTAACTTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACCAAAAGAGCCAAAGTaGCCACCGCACAAAATGAGA | + |
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Preference number: 3 (lower is better) Translates to: SGNFSGLPLSPPEGNCRSPKEPK*PPHKMR Trigger: TCTCATTTTGTGCGGTGGCAACTTTGGCTCTTTTGG...TGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAAGTTACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000197829.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR CCA 72 bp | GAATCTGAAAGACAAGCGGGTGTCACAGGTTTGTCCTaGATCAGAGTCACCCACCAGGCCCTCTCAAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: ESERQAGVTGLS*IRVTHQALSSL Trigger: TAAGCTTGAGAGGGCCTGGTGGGTGACTCTGATCCAGGACAAACCTGTGACACCCGCTTGTCTTTCAGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197438.5 |
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| 3UTR-3UTR CAA 90 bp | GGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCACCAACCATTAATAGCATCAAGCTaGCCCAAAAGAGCCAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: GLPLSPPEGNCRSQSHQPLIASS*PKRAKV Trigger: AACTTTGGCTCTTTTGGGCAAGCTTGATGCTATTAA...TGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000197829.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTCTTCTCCCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGTTCTCGGGTCTTCCATaGAGTCCGCCTGAGGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: SALLPEVTTQQCQIRYERFSGLP*SPPEGN Trigger: GTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAA...CCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGGAGAAGAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR GCA 72 bp | TCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTaGTCTTCTCCCAGAAGTGACAACCCAGCAATGCCA | + |
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Preference number: 3 (lower is better) Translates to: SGIQKTGLTGLI*SSPRSDNPAMP Trigger: TGGCATTGCTGGGTTGTCACTTCTGGGAGAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| 3UTR TCA 72 bp | TGTATCAATTTCTCCTTATCTTTTAGTGTGGTGTGCTaGCAAGCCAGCACGGGGCATGCTGGGACTTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: CINFSLSFSVVC*QASTGHAGTSS Trigger: GCTGGAAGTCCCAGCATGCCCCGTGCTGGCTTGTCAGCACACCACACTAAAAGATAAGGAGAAATTGATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198094.2 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| 3UTR-3UTR CAA 90 bp | AGCACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCTCCAAAAGAGCCAAAGTaGCCACCGCACAAAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: STSSGIQKTGLTGLICSSPKEPK*PPHKMR Trigger: TCTCATTTTGTGCGGTGGCAACTTTGGCTCTTTTGG...AGAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGCACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCCCAAAAGAGCCAAAGTaGCCACCGCACAAAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KHLFWHTEDRANRLDLLFPKEPK*PPHKMR Trigger: TCTCATTTTGTGCGGTGGCAACTTTGGCTCTTTTGG...GAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| 3UTR TCA 72 bp | CCCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATaGAAGGGATCCACCATATCTCCTGGTCTGTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PRSDNPAMPNKV*KGSTISPGLSA Trigger: TGCAGACAGACCAGGAGATATGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| 3UTR-3UTR CAA 90 bp | CACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCTCCTTAATAGCATCAAGCTaGCCCAAAAGAGCCAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLFWHTEDRANRLDLLFSLIASS*PKRAKV Trigger: AACTTTGGCTCTTTTGGGCAAGCTTGATGCTATTAA...GGAGAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| 3UTR TCA 72 bp | CAAATCCTCCCGTCTCTTCATCTTGACACGCTAAGATaGAACTTCGAAGCTTTTCTCTGTCAATCCAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: QILPSLHLDTLR*NFEAFLCQSNE Trigger: TTCATTGGATTGACAGAGAAAAGCTTCGAAGTTTCATCTTAGCGTGTCAAGATGAAGAGACGGGAGGATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000196266.5 ENSMUST00000196565.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000197829.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| 3UTR TCA 72 bp | TCATCAGTTTTATTAACAGAAATCACTTTCCATCATTaGTTGTTACACGACAATAGGACACGGGGAGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: SSVLLTEITFHH*LLHDNRTRGGI Trigger: GATGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTGTTAATAAAACTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 ENSMUST00000196565.5 ENSMUST00000197438.5 ENSMUST00000198350.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTATCCTCTGGCTCTTCATTGAAACCAAATTTGAACTGGACTGTGCTTCAATTAGTGTAATTTGTAACTaGCATCAGGTTAGCATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TILWLFIETKFELDCASISVICN*HQVSIQ Trigger: CTGAATGCTAACCTGATGCAAGTTACAAATTACACT...AATTGAAGCACAGTCCAGTTCAAATTTGGTTTCAATGAAGAGCCAGAGGATAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197438.5 |
||
| CDS-3UTR TCA 90 bp | TTAGTGTGGTGTGCTGACAAGCCAGCACGGGGCATGCTGGGACTTCCAGCAGGCTCTCGGTTCATGCGATaGAGCTGTCCCATGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVWCADKPARGMLGLPAGSRFMR*SCPMRS Trigger: GGACCTCATGGGACAGCTTCATCGCATGAACCGAGA...GCCTGCTGGAAGTCCCAGCATGCCCCGTGCTGGCTTGTCAGCACACCACACTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000196266.5 ENSMUST00000197438.5 ENSMUST00000198094.2 ENSMUST00000198350.5 ENSMUST00000200209.5 |
||
| CDS-3UTR TCA 90 bp | TTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCACGAATCTGGACAGCACTaGGCGTGTACAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSGLPLSPPEGNCRSQSHESGQH*ACTEGG Trigger: CCCACCTTCTGTACACGCTCAGTGCTGTCCAGATTC...GTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
||
| CDS-3UTR TCA 90 bp | GGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCACCAACCAGAATCTGGACAGCACTaGGCGTGTACAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLPLSPPEGNCRSQSHQPESGQH*ACTEGG Trigger: CCCACCTTCTGTACACGCTCAGTGCTGTCCAGATTC...TGGTTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
||
| CDS-3UTR TCA 90 bp | ACATCTGGTAACTTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCTCGGTTCATGCGATaGAGCTGTCCCATGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGNFSGLPLSPPEGNCRSRFMR*SCPMRS Trigger: GGACCTCATGGGACAGCTTCATCGCATGAACCGAGA...GCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAAGTTACCAGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| CDS-3UTR TCA 90 bp | AACTTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCTCTCGGTTCATGCGATaGAGCTGTCCCATGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NFSGLPLSPPEGNCRSQSSRFMR*SCPMRS Trigger: GGACCTCATGGGACAGCTTCATCGCATGAACCGAGA...GCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| CDS-3UTR TCA 90 bp | TCTGGTAACTTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCAGAATCTGGACAGCACTaGGCGTGTACAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNFSGLPLSPPEGNCRSESGQH*ACTEGG Trigger: CCCACCTTCTGTACACGCTCAGTGCTGTCCAGATTC...TGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAAGTTACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
||
| CDS-3UTR TCA 90 bp | GTGTCACAGGTTTGTCCTGGATCAGAGTCACCCACCAGGCCCTCTCAAGCTTACTCACCTGGACAGCACTaGGCGTGTACAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQVCPGSESPTRPSQAYSPGQH*ACTEGG Trigger: CCCACCTTCTGTACACGCTCAGTGCTGTCCAGGTGA...GTAAGCTTGAGAGGGCCTGGTGGGTGACTCTGATCCAGGACAAACCTGTGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197438.5 |
||
| CDS-3UTR TCA 90 bp | GCCGCTCACAAAGCCACCAACCAAGTAGGTCGGAGTTCACTTGGTGCAACTGACGAATCTGGACAGCACTaGGCGTGTACAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAHKATNQVGRSSLGATDESGQH*ACTEGG Trigger: CCCACCTTCTGTACACGCTCAGTGCTGTCCAGATTC...GTCAGTTGCACCAAGTGAACTCCGACCTACTTGGTTGGTGGCTTTGTGAGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
||
| CDS-3UTR TCA 90 bp | ACATCTGGTAACTTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTTATCTGGACAGCACTaGGCGTGTACAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSGNFSGLPLSPPEGNCRLSGQH*ACTEGG Trigger: CCCACCTTCTGTACACGCTCAGTGCTGTCCAGATAA...GCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAAGTTACCAGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200631.5 |
||
| CDS-3UTR CCA 90 bp | AACTTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCACAAAGCCCCCCACACTCATGCTaGCACGACTTGATAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: NFSGLPLSPPEGNCRSQSPPHSC*HDLINT Trigger: GGTGTTTATCAAGTCGTGCCAGCATGAGTGTGGGGG...GCTTTGTGAGCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAAGTT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| CDS-3UTR CCA 90 bp | GCCGCTCACAAAGCCACCAACCAAGTAGGTCGGAGTTCACTTGGTGCAACTGACGGTGGTCACAGCAAGTaGCAAGGTTTCACAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAHKATNQVGRSSLGATDGGHSK*QGFTRA Trigger: AGCCCTTGTGAAACCTTGCCACTTGCTGTGACCACC...GTCAGTTGCACCAAGTGAACTCCGACCTACTTGGTTGGTGGCTTTGTGAGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197438.5 |
||
| CDS-3UTR CCA 90 bp | CACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCTCCGTGGGAAGTAGCCTTTaGGTGGTCACAGCAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLFWHTEDRANRLDLLFSVGSSL*VVTASG Trigger: GCCACTTGCTGTGACCACCCAAAGGCTACTTCCCAC...GGAGAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197438.5 |
||
| CDS-3UTR TCA 90 bp | GGCTTGATCTGCTCTTCTCCCAGAAGTGACAACCCAGCAATGCCAAATAAGGTAGAATCCTGCCCAGCGTaGGATTCAGAGCCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLICSSPRSDNPAMPNKVESCPA*DSEPGL Trigger: CAGACCAGGCTCTGAATCTCACGCTGGGCAGGATTC...TACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGGAGAAGAGCAGATCAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196956.5 |
||
| CDS-3UTR TCA 90 bp | CTCCCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATCTCGGTTCATGCGATaGAGCTGTCCCATGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPEVTTQQCQIRYERDPPSRFMR*SCPMRS Trigger: GGACCTCATGGGACAGCTTCATCGCATGAACCGAGA...TGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| CDS-3UTR GCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCACCGCCTGAGGGCAACTaGCGCTCACAAAGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKSLSIIDCYTTIGHGEAPPEGN*RSQSHQ Trigger: TTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGG...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR CCA 90 bp | AGCACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCTCCCCCACACTCATGCTaGCACGACTTGATAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: STSSGIQKTGLTGLICSSPPHSC*HDLINT Trigger: GGTGTTTATCAAGTCGTGCCAGCATGAGTGTGGGGG...AGAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| CDS-3UTR TCA 90 bp | CATCAAGCTTGCCCAAAAGAGCCAAAGTTGCCACCGCACAAAATGAGAATCTTGGAATCTGGACAGCACTaGGCGTGTACAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQACPKEPKLPPHKMRILESGQH*ACTEGG Trigger: CCCACCTTCTGTACACGCTCAGTGCTGTCCAGATTC...CAAGATTCTCATTTTGTGCGGTGGCAACTTTGGCTCTTTTGGGCAAGCTTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000198094.2 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| CDS-3UTR TCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCAGAATCTGGACAGCACTaGGCGTGTACAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKSLSIIDCYTTIGHGEAESGQH*ACTEGG Trigger: CCCACCTTCTGTACACGCTCAGTGCTGTCCAGATTC...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 ENSMUST00000198350.5 |
||
| CDS-3UTR GCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGCCGCCTGAGGGCAACTaGCGCTCACAAAGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLPPEGN*RSQSHQ Trigger: TTGGTGGCTTTGTGAGCGGCAGTTGCCCTCAGGCGG...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
||
| CDS-3UTR TCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGTCTCGGGTCTTCCATTaGGTCCGCCTGAGGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLSRVFH*VRLRAT Trigger: AGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGA...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
||
| CDS-3UTR CCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCACCCCCACACTCATGCTaGCACGACTTGATAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: QKSLSIIDCYTTIGHGEAPPHSC*HDLINT Trigger: GGTGTTTATCAAGTCGTGCCAGCATGAGTGTGGGGG...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 ENSMUST00000197438.5 ENSMUST00000198350.5 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATATCCCCCACACTCATGCTaGCACGACTTGATAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: PEVTTQQCQIRYERDPPYPPHSC*HDLINT Trigger: GGTGTTTATCAAGTCGTGCCAGCATGAGTGTGGGGG...ATATGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
||
| CDS-3UTR TCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGTCTCGGTTCATGCGATaGAGCTGTCCCATGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLSRFMR*SCPMRS Trigger: GGACCTCATGGGACAGCTTCATCGCATGAACCGAGA...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 ENSMUST00000196266.5 ENSMUST00000197438.5 ENSMUST00000198350.5 |
||
| CDS-3UTR TCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGGAATCTGGACAGCACTaGGCGTGTACAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLESGQH*ACTEGG Trigger: CCCACCTTCTGTACACGCTCAGTGCTGTCCAGATTC...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 ENSMUST00000196266.5 ENSMUST00000198350.5 |
||
| CDS-3UTR TCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCACTCTTCTCCCAGAAGTaGCAACCCAGCAATGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKSLSIIDCYTTIGHGEALFSQK*QPSNAK Trigger: TTTGGCATTGCTGGGTTGTCACTTCTGGGAGAAGAG...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
||
| CDS-3UTR GCA 90 bp | AATCTTGTATCAATTTCTCCTTATCTTTTAGTGTGGTGTGCTGACAAGCCAGCACGTCTTTCTGCTGTGTaGCCATGTCCGACCGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLVSISPYLLVWCADKPARLSAV*PCPTAE Trigger: TTCGGCGGTCGGACATGGGCACACAGCAGAAAGACG...TGCTGGCTTGTCAGCACACCACACTAAAAGATAAGGAGAAATTGATACAAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198094.2 |
||
| CDS-3UTR CCA 90 bp | GTATCAATTTCTCCTTATCTTTTAGTGTGGTGTGCTGACAAGCCAGCACGGGGCTACAGAGTAAGAATCTaGACAGCACTGAGCGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSISPYLLVWCADKPARGYRVRI*TALSVY Trigger: GTACACGCTCAGTGCTGTCCAGATTCTTACTCTGTA...GCCCCGTGCTGGCTTGTCAGCACACCACACTAAAAGATAAGGAGAAATTGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000198094.2 ENSMUST00000198350.5 ENSMUST00000200209.5 |
||
| CDS-3UTR GCA 90 bp | CACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCTCCCACCATCAAAGTTCATaGAGGACAAAACAAACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLFWHTEDRANRLDLLFSHHQSS*RTKQTQ Trigger: TTGAGTTTGTTTTGTCCTGCATGAACTTTGATGGTG...GGAGAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196956.5 |
||
| CDS-3UTR GCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCACTAACAGGCTTGATCTaGTCTTCTCCCAGAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QKSLSIIDCYTTIGHGEALTGLI*SSPRSD Trigger: GTCACTTCTGGGAGAAGAGCAGATCAAGCCTGTTAG...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
||
| CDS-3UTR CCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCAATCCACCATATCTCCTaGTCTGTCTGCAAATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKSLSIIDCYTTIGHGEAIHHIS*SVCKSS Trigger: GGAGGATTTGCAGACAGACCAGGAGATATGGTGGAT...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
||
| CDS-3UTR TCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCACCCGTCTCTTCATCTTaGCACGCTAAGATGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QKSLSIIDCYTTIGHGEAPVSSS*HAKMKL Trigger: AAGTTTCATCTTAGCGTGTCAAGATGAAGAGACGGG...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
||
| CDS-3UTR TCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGTGGACATTCACCCTCTaGAGCACCTCTTCTGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLWTFTL*STSSGI Trigger: TATGCCAGAAGAGGTGCTTCAGAGGGTGAATGTCCA...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
||
| CDS-3UTR CCA 90 bp | AATCTTGTATCAATTTCTCCTTATCTTTTAGTGTGGTGTGCTGACAAGCCAGCACCCCCACACTCATGCTaGCACGACTTGATAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: NLVSISPYLLVWCADKPAPPHSC*HDLINT Trigger: GGTGTTTATCAAGTCGTGCCAGCATGAGTGTGGGGG...TGCTGGCTTGTCAGCACACCACACTAAAAGATAAGGAGAAATTGATACAAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000196266.5 ENSMUST00000197438.5 ENSMUST00000198094.2 ENSMUST00000198350.5 ENSMUST00000200209.5 |
||
| CDS-3UTR CCA 90 bp | GAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATATCTCTACAGAGTAAGAATCTaGACAGCACTGAGCGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EVTTQQCQIRYERDPPYLYRVRI*TALSVY Trigger: GTACACGCTCAGTGCTGTCCAGATTCTTACTCTGTA...GAGATATGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| CDS-3UTR CCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCATACAGAGTAAGAATCTaGACAGCACTGAGCGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: QKSLSIIDCYTTIGHGEAYRVRI*TALSVY Trigger: GTACACGCTCAGTGCTGTCCAGATTCTTACTCTGTA...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 ENSMUST00000198350.5 |
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| CDS-3UTR GCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCAGTGACAACCCAGCAATaGCAAATAAGGTATGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: QKSLSIIDCYTTIGHGEAVTTQQ*QIRYER Trigger: CCTTTCATACCTTATTTGGCATTGCTGGGTTGTCAC...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR GCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGCTAACAGGCTTGATCTaGTCTTCTCCCAGAAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLLTGLI*SSPRSD Trigger: GTCACTTCTGGGAGAAGAGCAGATCAAGCCTGTTAG...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR CCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGATCCACCATATCTCCTaGTCTGTCTGCAAATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLIHHIS*SVCKSS Trigger: GGAGGATTTGCAGACAGACCAGGAGATATGGTGGAT...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR TCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGCCCGTCTCTTCATCTTaGCACGCTAAGATGAAACTT | + |
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Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLPVSSS*HAKMKL Trigger: AAGTTTCATCTTAGCGTGTCAAGATGAAGAGACGGG...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR GCA 90 bp | AATCTTGTATCAATTTCTCCTTATCTTTTAGTGTGGTGTGCTGACAAGCCAGCAATAGTAACGTCTTTCTaGTGTGTGCCCATGTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: NLVSISPYLLVWCADKPAIVTSF*CVPMSD Trigger: GTCGGACATGGGCACACAGCAGAAAGACGTTACTAT...TGCTGGCTTGTCAGCACACCACACTAAAAGATAAGGAGAAATTGATACAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198094.2 |
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| CDS-3UTR CCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGTACAGAGTAAGAATCTaGACAGCACTGAGCGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLYRVRI*TALSVY Trigger: GTACACGCTCAGTGCTGTCCAGATTCTTACTCTGTA...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 ENSMUST00000196266.5 ENSMUST00000198350.5 |
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| CDS-3UTR GCA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCACACCATCAAAGTTCATaGAGGACAAAACAAACTCAA | + |
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Preference number: 4 (lower is better) Translates to: QKSLSIIDCYTTIGHGEAHHQSS*RTKQTQ Trigger: TTGAGTTTGTTTTGTCCTGCATGAACTTTGATGGTG...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR GCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGGTGACAACCCAGCAATaGCAAATAAGGTATGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLVTTQQ*QIRYER Trigger: CCTTTCATACCTTATTTGGCATTGCTGGGTTGTCAC...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR CCA 90 bp | AATCTTGTATCAATTTCTCCTTATCTTTTAGTGTGGTGTGCTGACAAGCCAGCATACAGAGTAAGAATCTaGACAGCACTGAGCGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: NLVSISPYLLVWCADKPAYRVRI*TALSVY Trigger: GTACACGCTCAGTGCTGTCCAGATTCTTACTCTGTA...TGCTGGCTTGTCAGCACACCACACTAAAAGATAAGGAGAAATTGATACAAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000196266.5 ENSMUST00000198094.2 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| CDS-3UTR TCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGATGCCAAATAAGGTATaGAAGGGATCCACCATATCT | + |
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Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLMPNKV*KGSTIS Trigger: AGATATGGTGGATCCCTTTCATACCTTATTTGGCAT...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR GCA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGCACCATCAAAGTTCATaGAGGACAAAACAAACTCAA | + |
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Preference number: 4 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLHHQSS*RTKQTQ Trigger: TTGAGTTTGTTTTGTCCTGCATGAACTTTGATGGTG...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR CAA 90 bp | ACAGCACTGAGCGTGTACAGAAGGTGGGGGTCGTGCCCAATGCTAGCACTTATTGCCGAGGCAGGGGCATaGCGGAGAGCTCCAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TALSVYRRWGSCPMLALIAEAGA*RRAPGQ Trigger: CTGGCCTGGAGCTCTCCGCAATGCCCCTGCCTCGGC...AATAAGTGCTAGCATTGGGCACGACCCCCACCTTCTGTACACGCTCAGTGCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196565.5 |
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| CDS CCA 90 bp | CTTTGGGTGGTCACAGCAAGTGGCAAGGTTTCACAAGGGCTCACCTaGACAGCACTGAGCGTGTACAGAAGGTGGGGGTCGTGCCCAATG | + |
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Preference number: 5 (lower is better) Translates to: LWVVTASGKVSQGLT*TALSVYRRWGSCPM Trigger: CATTGGGCACGACCCCCACCTTCTGTACACGCTCAGTGCTGTCCAGGTGAGCCCTTGTGAAACCTTGCCACTTGCTGTGACCACCCAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197438.5 |
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| CDS-3UTR CAA 90 bp | TTAGTGTGGTGTGCTGACAAGCCAGCACGGGGCATGCTGGGACTTCCAGCAGGCTCATGCTGGCACGACTaGATAAACACCAGGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: LVWCADKPARGMLGLPAGSCWHD*INTRIS Trigger: AGAAATCCTGGTGTTTATCAAGTCGTGCCAGCATGA...GCCTGCTGGAAGTCCCAGCATGCCCCGTGCTGGCTTGTCAGCACACCACACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000196266.5 ENSMUST00000197438.5 ENSMUST00000198094.2 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| CDS-3UTR CAA 90 bp | ACATCTGGTAACTTCTCGGGTCTTCCATTGAGTCCGCCTGAGGGCAACTGCCGCTCATGCTGGCACGACTaGATAAACACCAGGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: TSGNFSGLPLSPPEGNCRSCWHD*INTRIS Trigger: AGAAATCCTGGTGTTTATCAAGTCGTGCCAGCATGA...GCGGCAGTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAAGTTACCAGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| CDS-3UTR CAA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCATTCTCGGGTCTTCCATaGAGTCCGCCTGAGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: QKSLSIIDCYTTIGHGEAFSGLP*SPPEGN Trigger: GTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAA...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR CAA 90 bp | AAGCACCTCTTCTGGCATACAGAAGACAGGGCTAACAGGCTTGATCTGCTCTTCTCATGCTGGCACGACTaGATAAACACCAGGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: KHLFWHTEDRANRLDLLFSCWHD*INTRIS Trigger: AGAAATCCTGGTGTTTATCAAGTCGTGCCAGCATGA...GAAGAGCAGATCAAGCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000198350.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| CDS-3UTR CAA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGTTCTCGGGTCTTCCATaGAGTCCGCCTGAGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLFSGLP*SPPEGN Trigger: GTTGCCCTCAGGCGGACTCAATGGAAGACCCGAGAA...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR CAA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCAACAGGGCTAACAGGCTaGATCTGCTCTTCTCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: QKSLSIIDCYTTIGHGEATGLTG*ICSSPR Trigger: TCTGGGAGAAGAGCAGATCAAGCCTGTTAGCCCTGT...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR CAA 90 bp | CCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATATCCAAAAGAGCCAAAGTaGCCACCGCACAAAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: PEVTTQQCQIRYERDPPYPKEPK*PPHKMR Trigger: TCTCATTTTGTGCGGTGGCAACTTTGGCTCTTTTGG...ATATGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196956.5 |
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| CDS-3UTR CAA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGCCAAAAGAGCCAAAGTaGCCACCGCACAAAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLPKEPK*PPHKMR Trigger: TCTCATTTTGTGCGGTGGCAACTTTGGCTCTTTTGG...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR CAA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGTCATGCTGGCACGACTaGATAAACACCAGGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLSCWHD*INTRIS Trigger: AGAAATCCTGGTGTTTATCAAGTCGTGCCAGCATGA...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 ENSMUST00000196266.5 ENSMUST00000197438.5 ENSMUST00000198350.5 |
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| CDS-3UTR CAA 90 bp | CAGAAATCACTTTCCATCATTGATTGTTACACGACAATAGGACACGGGGAGGCATTAATAGCATCAAGCTaGCCCAAAAGAGCCAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: QKSLSIIDCYTTIGHGEALIASS*PKRAKV Trigger: AACTTTGGCTCTTTTGGGCAAGCTTGATGCTATTAA...TGCCTCCCCGTGTCCTATTGTCGTGTAACAATCAATGATGGAAAGTGATTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS-3UTR CAA 90 bp | CCAGAAGTGACAACCCAGCAATGCCAAATAAGGTATGAAAGGGATCCACCATATTTAATAGCATCAAGCTaGCCCAAAAGAGCCAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: PEVTTQQCQIRYERDPPYLIASS*PKRAKV Trigger: AACTTTGGCTCTTTTGGGCAAGCTTGATGCTATTAA...ATATGGTGGATCCCTTTCATACCTTATTTGGCATTGCTGGGTTGTCACTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196956.5 |
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| CDS-3UTR CAA 90 bp | AATCTTGTATCAATTTCTCCTTATCTTTTAGTGTGGTGTGCTGACAAGCCAGCATCATGCTGGCACGACTaGATAAACACCAGGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: NLVSISPYLLVWCADKPASCWHD*INTRIS Trigger: AGAAATCCTGGTGTTTATCAAGTCGTGCCAGCATGA...TGCTGGCTTGTCAGCACACCACACTAAAAGATAAGGAGAAATTGATACAAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000196266.5 ENSMUST00000197438.5 ENSMUST00000198094.2 ENSMUST00000198350.5 ENSMUST00000200209.5 |
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| CDS-3UTR CAA 90 bp | CACTTCAAATACAGCAGTAATTCATATTGCACACTACAGCATCTCTCCCATCTGTTAATAGCATCAAGCTaGCCCAAAAGAGCCAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: HFKYSSNSYCTLQHLSHLLIASS*PKRAKV Trigger: AACTTTGGCTCTTTTGGGCAAGCTTGATGCTATTAA...CAGATGGGAGAGATGCTGTAGTGTGCAATATGAATTACTGCTGTATTTGAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089950.11 ENSMUST00000167111.6 |
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| CDS GCA 72 bp | ATGATCGCCTTGCAGGCCCGCCTGTTCCCCATGCTGTaGGAGCCCGCGATGCCCCGCAGCCCGACCCACCGC | + |
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Preference number: 6 (lower is better) Translates to: MIALQARLFPML*EPAMPRSPTHR Trigger: GCGGTGGGTCGGGCTGCGGGGCATCGCGGGCTCGCACAGCATGGGGAACAGGCGGGCCTGCAAGGCGATCAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196565.5 |
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| CDS CAA 90 bp | TGCGGAGAGCTCCAGGCCAGCCTGGGCCCCACAAGAATGATCGCCTaGCAGGCCCGCCTGTTCCCCATGCTGTGCGAGCCCGCGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: CGELQASLGPTRMIA*QARLFPMLCEPAMP Trigger: GGGCATCGCGGGCTCGCACAGCATGGGGAACAGGCGGGCCTGCAAGGCGATCATTCTTGTGGGGCCCAGGCTGGCCTGGAGCTCTCCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196565.5 |
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| CDS TCA 72 bp | GCGGAGAGCTCCAGGCCAGCCTGGGCCCCACAAGAATaGTCGCCTTGCAGGCCCGCCTGTTCCCCATGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AESSRPAWAPQE*SPCRPACSPCC Trigger: ACAGCATGGGGAACAGGCGGGCCTGCAAGGCGATCATTCTTGTGGGGCCCAGGCTGGCCTGGAGCTCTCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196565.5 |
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| CDS TCA 72 bp | GTGGCAAGGTTTCACAAGGGCTCACCTGGACAGCACTaGGCGTGTACAGAAGGTGGGGGTCGTGCCCAATGC | + |
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Preference number: 6 (lower is better) Translates to: VARFHKGSPGQH*ACTEGGGRAQC Trigger: GCATTGGGCACGACCCCCACCTTCTGTACACGCTCAGTGCTGTCCAGGTGAGCCCTTGTGAAACCTTGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197438.5 |
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| CDS CCA 72 bp | GTCACAGCAAGTGGCAAGGTTTCACAAGGGCTCACCTaGACAGCACTGAGCGTGTACAGAAGGTGGGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: VTASGKVSQGLT*TALSVYRRWGS Trigger: CGACCCCCACCTTCTGTACACGCTCAGTGCTGTCCAGGTGAGCCCTTGTGAAACCTTGCCACTTGCTGTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197438.5 |
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| CDS TCA 72 bp | GGCATGCTTCTCCAGCAACAGGGTGTCAGGCGCATCTaGCTTGATAGTAACGTCTTTCTGCTGTGTGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: GMLLQQQGVRRI*LDSNVFLLCAL Trigger: AAGGGCACACAGCAGAAAGACGTTACTATCAAGTCAGATGCGCCTGACACCCTGTTGCTGGAGAAGCATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167111.6 ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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| CDS CAA 72 bp | TGCTTCTCCAGCAACAGGGTGTCAGGCGCATCTGACTaGATAGTAACGTCTTTCTGCTGTGTGCCCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: CFSSNRVSGASD*IVTSFCCVPFQ Trigger: TTGGAAGGGCACACAGCAGAAAGACGTTACTATCAAGTCAGATGCGCCTGACACCCTGTTGCTGGAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000167111.6 ENSMUST00000196266.5 ENSMUST00000196956.5 ENSMUST00000197438.5 ENSMUST00000200209.5 ENSMUST00000200631.5 |
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