Pregenerated sensors for RABGGTA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040472Ensembl transcript IDs: ENSMUST00000062861.15, ENSMUST00000163889.3, ENSMUST00000169237.8, ENSMUST00000227061.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CATCTCATCCCTGAGTGTATGAGGATCAAATGGGACCAGAGTTCCCAAGGGCTTCCAGGGCAGAAAGGCTaGAGGTGGCAGGCTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: HLIPECMRIKWDQSSQGLPGQKG*RWQAHR Trigger: CCTGTGAGCCTGCCACCTTCAGCCTTTCTGCCCTGG...AAGCCCTTGGGAACTCTGGTCCCATTTGATCCTCATACACTCAGGGATGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
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| 3UTR-3UTR CCA 90 bp | AACCTGATCCTAATTCCTATCCCAGCTTCAAGCTCAGGCACCACGATAGCCCAAAGAATCACAGGACAGTaGCCCCATACCCCAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: NLILIPIPASSSGTTIAQRITGQ*PHTPES Trigger: GCTCTCTGGGGTATGGGGCCACTGTCCTGTGATTCT...TTGGGCTATCGTGGTGCCTGAGCTTGAAGCTGGGATAGGAATTAGGATCAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| 3UTR-3UTR CCA 90 bp | CTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAAGCAGAATCACAGGACAGTaGCCCCATACCCCAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LMSSPNHNLILIPIPASSRITGQ*PHTPES Trigger: GCTCTCTGGGGTATGGGGCCACTGTCCTGTGATTCT...GCTTGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTGTCTTCAGACACCAGAAGAGGGTGTCAGATCTTATTACAGATGGTTATACCCAGCCCTGGTCCTaGCCAGCCATAAACACTGAG | + |
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Preference number: 2 (lower is better) Translates to: VAVFRHQKRVSDLITDGYTQPWS*PAINTE Trigger: CTCAGTGTTTATGGCTGGTCAGGACCAGGGCTGGGT...ATAACCATCTGTAATAAGATCTGACACCCTCTTCTGGTGTCTGAAGACAGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| 3UTR CAA 90 bp | GCTTTTCAACCACAGAATGTAATCCACAGAGACCAATATTGTCATTaGAACCGGGTGGGGCAAGATGCTGTGACACATTCTTCCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: AFQPQNVIHRDQYCH*NRVGQDAVTHSSSN Trigger: GTTTGAGGAAGAATGTGTCACAGCATCTTGCCCCACCCGGTTCAAATGACAATATTGGTCTCTGTGGATTACATTCTGTGGTTGAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAAGGGCTTTTCAACCACAGAATGTAATCCACAGAGACCAATATTGTCATTTCTTCCTCAAACACTaGGAGGTCCTGAGCCTACTC | + |
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Preference number: 2 (lower is better) Translates to: FPRAFQPQNVIHRDQYCHFFLKH*EVLSLL Trigger: GAGTAGGCTCAGGACCTCTCAGTGTTTGAGGAAGAA...ATGACAATATTGGTCTCTGTGGATTACATTCTGTGGTTGAAAAGCCCTTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGACACCAGAAGAGGGTGTCAGATCTTATTACAGATGGTTATGAGCCACCATTCCTTTTTCCAAAATaGACAGTGGTGGTAATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FRHQKRVSDLITDGYEPPFLFPK*TVVVME Trigger: CTCCATTACCACCACTGTGCATTTTGGAAAAAGGAA...TGGTGGCTCATAACCATCTGTAATAAGATCTGACACCCTCTTCTGGTGTCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| 3UTR CCA 72 bp | CCCTGGCTGTCCTGTAACTCACTCTGTAGACCAGGCTaGCCTCTAACTCAGAAATCTGCCTGCCTTTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PWLSCNSLCRPG*PLTQKSACLCL Trigger: GAGGCAAAGGCAGGCAGATTTCTGAGTTAGAGGCCAGCCTGGTCTACAGAGTGAGTTACAGGACAGCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
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| 3UTR CCA 72 bp | GGAGGAAGTGTTGTCAGGGCAGCAGTAATGGTAGCTTaGCAGCCTAGAGGGGCCTCTCCAGTCTTTATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGSVVRAAVMVA*QPRGASPVFIQ Trigger: CTGAATAAAGACTGGAGAGGCCCCTCTAGGCTGCCAAGCTACCATTACTGCTGCCCTGACAACACTTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| 3UTR TCA 72 bp | TGCCTTTGCCTCCCAAGTGCTAGGATTAAAGGCCTGTaGCACCACTGCCCGGTGAGAAAGCTTTTCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLCLPSARIKGL*HHCPVRKLFFS Trigger: AGAAAAGAAAAGCTTTCTCACCGGGCAGTGGTGTCACAGGCCTTTAATCCTAGCACTTGGGAGGCAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
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| 3UTR TCA 72 bp | CAGATGGTTATGAGCCACCATGTGGTTGCTGGGATTTaGACTCAGGACTTTCAGAAGAACAGTCAGCGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMVMSHHVVAGI*TQDFQKNSQRS Trigger: AGAGCGCTGACTGTTCTTCTGAAAGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCATAACCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| 3UTR TCA 72 bp | CCAGAAGAGGGTGTCAGATCTTATTACAGATGGTTATaGGCCACCATGTGGTTGCTGGGATTTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEEGVRSYYRWL*ATMWLLGFELR Trigger: CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCATAACCATCTGTAATAAGATCTGACACCCTCTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| 3UTR GCA 72 bp | GATCTTATTACAGATGGTTATGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACTTTCAGAAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: DLITDGYEPPCG*WDLNSGLSEEQ Trigger: CTGTTCTTCTGAAAGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCATAACCATCTGTAATAAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| 3UTR CCA 72 bp | CTTATTACAGATGGTTATGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACTTTCAGAAGAACAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LITDGYEPPCGC*DLNSGLSEEQS Trigger: TGACTGTTCTTCTGAAAGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCATAACCATCTGTAATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| 3UTR TCA 72 bp | AGTTCAAATGTTTTAATCATCTCATCCCTGAGTGTATaGGGATCAAATGGGACCAGAGTTCCCAAGGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SSNVLIISSLSV*GSNGTRVPKGF Trigger: AAAGCCCTTGGGAACTCTGGTCCCATTTGATCCTCATACACTCAGGGATGAGATGATTAAAACATTTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | CACCACGATAGCCCAAAACTGATGGTGAACTCAGACCCAGCCCTGGTCCTGACCGCTCCCGGGCCCAGTTaGGCTCAGGCAGGCGACTCA | + |
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Preference number: 4 (lower is better) Translates to: HHDSPKLMVNSDPALVLTAPGPS*AQAGDS Trigger: TGAGTCGCCTGCCTGAGCCCAACTGGGCCCGGGAGC...GGTCAGGACCAGGGCTGGGTCTGAGTTCACCATCAGTTTTGGGCTATCGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | CACAGTGGTGGTAATGGAGGAAGTGTTGTCAGGGCAGCAGTAATGGTAGCTTGGGCTCCCGGGCCCAGTTaGGCTCAGGCAGGCGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSGGNGGSVVRAAVMVAWAPGPS*AQAGDS Trigger: TGAGTCGCCTGCCTGAGCCCAACTGGGCCCGGGAGC...CCAAGCTACCATTACTGCTGCCCTGACAACACTTCCTCCATTACCACCACTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGGGCTGGGGGTGCAGCTaGGGCAAGAGGCAGGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGEGWGCS*GKRQER Trigger: TCGCTCCTGCCTCTTGCCCCAGCTGCACCCCCAGCC...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGCCCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTGGCAAGAGTCTGAAGTaGAGCAGACTGCTGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LQPRDSSSDEQSKPQPDPGKSLK*SRLLEA Trigger: CGCCTCCAGCAGTCTGCTGCACTTCAGACTCTTGCC...AGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGGGCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | GGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGCTCCCGGGCCCAGTTaGGCTCAGGCAGGCGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPLQSLFSPNKLKGEGEMAPGPS*AQAGDS Trigger: TGAGTCGCCTGCCTGAGCCCAACTGGGCCCGGGAGC...CATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAATGCACAGTGGTGGTAATGGAGGAAGTGTTGTCAGGGCAGCAGTAATGGGCTGGGGGTGCAGCTaGGGCAAGAGGCAGGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SKMHSGGNGGSVVRAAVMGWGCS*GKRQER Trigger: TCGCTCCTGCCTCTTGCCCCAGCTGCACCCCCAGCC...CATTACTGCTGCCCTGACAACACTTCCTCCATTACCACCACTGTGCATTTTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCCTTCAGGGAGCCGTCCCTaGGGGCCAGAGTCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSLFSPNKLKGEGEMGPSGSRP*GPESGW Trigger: CCAGCCAGACTCTGGCCCCCAGGGACGGCTCCCTGA...AGGCCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | CCCTTCCTTTTTCCAAAATGCACAGTGGTGGTAATGGAGGAAGTGTTGTCAGGGTCAGGGAGCCGTCCCTaGGGGCCAGAGTCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFLFPKCTVVVMEEVLSGSGSRP*GPESGW Trigger: CCAGCCAGACTCTGGCCCCCAGGGACGGCTCCCTGA...CCCTGACAACACTTCCTCCATTACCACCACTGTGCATTTTGGAAAAAGGAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | TCCAAAATGCACAGTGGTGGTAATGGAGGAAGTGTTGTCAGGGCAGCAGTAATGTCAGGGAGCCGTCCCTaGGGGCCAGAGTCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SKMHSGGNGGSVVRAAVMSGSRP*GPESGW Trigger: CCAGCCAGACTCTGGCCCCCAGGGACGGCTCCCTGA...CATTACTGCTGCCCTGACAACACTTCCTCCATTACCACCACTGTGCATTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR TCA 90 bp | GGCTGGCCTCTAACTCAGAAATCTGCCTGCCTTTGCCTCCCAAGTGCTAGGATTCAGGAGGCAAGAGTCTaGAGTGCAGCAGACTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GWPLTQKSACLCLPSARIQEARV*SAADCW Trigger: CCAGCAGTCTGCTGCACTTCAGACTCTTGCCTCCTG...AATCCTAGCACTTGGGAGGCAAAGGCAGGCAGATTTCTGAGTTAGAGGCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGCCCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTCTTTTGGCCTCTGCCTaGTCTTCGGACGTCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: LQPRDSSSDEQSKPQPDPLLASA*SSDVFT Trigger: GGTGAAGACGTCCGAAGAGCAGGCAGAGGCCAAAAG...AGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGGGCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | GTAATGGTAGCTTGGCAGCCTAGAGGGGCCTCTCCAGTCTTTATTCAGTCCCAACGGATGCCCTCTTCTTaGCACAGCGAGTTGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: VMVAWQPRGASPVFIQSQRMPSS*HSELPC Trigger: GCAGGGCAACTCGCTGTGCCAAGAAGAGGGCATCCG...TTGGGACTGAATAAAGACTGGAGAGGCCCCTCTAGGCTGCCAAGCTACCATTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGCCCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTTCCTCAGGGGACTTCTaGGTTTCTAGCTGCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LQPRDSSSDEQSKPQPDPSSGDF*VSSCWS Trigger: GCTCCAGCAGCTAGAAACCCAGAAGTCCCCTGAGGA...AGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGGGCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | ATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAAGCTCAGGCTGGGGGTGCAGCTaGGGCAAGAGGCAGGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: MSSPNHNLILIPIPASSSGWGCS*GKRQER Trigger: TCGCTCCTGCCTCTTGCCCCAGCTGCACCCCCAGCC...TGAGCTTGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR GCA 90 bp | ATAAACACTGAGGGTCTTGGTAGACAGAATCACAGGACAGTGGCCCCATACCCCGGCAAGAGTCTGAAGTaGAGCAGACTGCTGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: INTEGLGRQNHRTVAPYPGKSLK*SRLLEA Trigger: CGCCTCCAGCAGTCTGCTGCACTTCAGACTCTTGCC...GGGGTATGGGGCCACTGTCCTGTGATTCTGTCTACCAAGACCCTCAGTGTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR GCA 90 bp | GTAATGGTAGCTTGGCAGCCTAGAGGGGCCTCTCCAGTCTTTATTCAGTCCCAAGCTGGAGCACTTCTCTaGGACAGTTCCAGAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VMVAWQPRGASPVFIQSQAGALL*DSSRGW Trigger: CCACCCTCTGGAACTGTCGCAGAGAAGTGCTCCAGC...TTGGGACTGAATAAAGACTGGAGAGGCCCCTCTAGGCTGCCAAGCTACCATTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGTCACAGAGCCAGACATaGCTGGGCCGGTTCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGESQSQT*LGRFLP Trigger: TGGCAGGAACCGGCCCAGCCATGTCTGGCTCTGTGA...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | CCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTCGGATGCCCTCTTCTTaGCACAGCGAGTTGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PETALLMSSPNHNLILIPRMPSS*HSELPC Trigger: GCAGGGCAACTCGCTGTGCCAAGAAGAGGGCATCCG...AGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR TCA 90 bp | AACCTGATCCTAATTCCTATCCCAGCTTCAAGCTCAGGCACCACGATAGCCCAAACTGTGAGATCCTTGTaGGCCAGGTGCAGCACACGC | + |
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Preference number: 4 (lower is better) Translates to: NLILIPIPASSSGTTIAQTVRSL*ARCSTR Trigger: GCGTGTGCTGCACCTGGCTCACAAGGATCTCACAGT...TTGGGCTATCGTGGTGCCTGAGCTTGAAGCTGGGATAGGAATTAGGATCAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR TCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGACTGTGAGATCCTTGTaGGCCAGGTGCAGCACACGC | + |
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Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGETVRSL*ARCSTR Trigger: GCGTGTGCTGCACCTGGCTCACAAGGATCTCACAGT...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR TCA 90 bp | CCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTACTGTGAGATCCTTGTaGGCCAGGTGCAGCACACGC | + |
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Preference number: 4 (lower is better) Translates to: PETALLMSSPNHNLILIPTVRSL*ARCSTR Trigger: GCGTGTGCTGCACCTGGCTCACAAGGATCTCACAGT...AGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR TCA 90 bp | CACCACGATAGCCCAAAACTGATGGTGAACTCAGACCCAGCCCTGGTCCTGACCACAGGTCAAGATGAGTaGCCAAGAGCAGTTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HHDSPKLMVNSDPALVLTTGQDE*PRAVVP Trigger: TGGAACAACTGCTCTTGGTCACTCATCTTGACCTGT...GGTCAGGACCAGGGCTGGGTCTGAGTTCACCATCAGTTTTGGGCTATCGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR TCA 90 bp | GTAATGGTAGCTTGGCAGCCTAGAGGGGCCTCTCCAGTCTTTATTCAGTCCCAAACGAGAAAAGCAGACTaGCAGACAGGCCTCTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VMVAWQPRGASPVFIQSQTRKAD*QTGLFP Trigger: CGGGAAGAGGCCTGTCTGTCAGTCTGCTTTTCTCGT...TTGGGACTGAATAAAGACTGGAGAGGCCCCTCTAGGCTGCCAAGCTACCATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCCTGGCTGGGCCGGTTCCTaGCATCTGGAGTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: LQSLFSPNKLKGEGEMGPGWAGS*HLESSI Trigger: AATGGAGGACTCCAGATGGCAGGAACCGGCCCAGCC...AGGCCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR GCA 90 bp | GGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGCTGGGCCGGTTCCTaGCATCTGGAGTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: GPLQSLFSPNKLKGEGEMGWAGS*HLESSI Trigger: AATGGAGGACTCCAGATGGCAGGAACCGGCCCAGCC...CATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR GCA 90 bp | CAGAGACCAATATTGTCATTTGAACCGGGTGGGGCAAGATGCTGTGACACATTCGGCTGGGCCGGTTCCTaGCATCTGGAGTCCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: QRPILSFEPGGARCCDTFGWAGS*HLESSI Trigger: AATGGAGGACTCCAGATGGCAGGAACCGGCCCAGCC...GAATGTGTCACAGCATCTTGCCCCACCCGGTTCAAATGACAATATTGGTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
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| CDS-3UTR GCA 90 bp | GTAATGGTAGCTTGGCAGCCTAGAGGGGCCTCTCCAGTCTTTATTCAGTCCCAACCACCAAGAACTTGCTaGGCAGGTCGTCCAAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: VMVAWQPRGASPVFIQSQPPRTC*AGRPSR Trigger: CCTACTTGGACGACCTGCGCAGCAAGTTCTTGGTGG...TTGGGACTGAATAAAGACTGGAGAGGCCCCTCTAGGCTGCCAAGCTACCATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR GCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGGGCAAGAGTCTGAAGTaGAGCAGACTGCTGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGEGKSLK*SRLLEA Trigger: CGCCTCCAGCAGTCTGCTGCACTTCAGACTCTTGCC...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS-3UTR CCA 90 bp | CTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCCTTCACAGAGCCAGACATaGCTGGGCCGGTTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSLFSPNKLKGEGEMGPSQSQT*LGRFLP Trigger: TGGCAGGAACCGGCCCAGCCATGTCTGGCTCTGTGA...AGGCCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAAGCTCACAGAGCCAGACATaGCTGGGCCGGTTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMSSPNHNLILIPIPASSSQSQT*LGRFLP Trigger: TGGCAGGAACCGGCCCAGCCATGTCTGGCTCTGTGA...GCTTGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | ATAAACACTGAGGGTCTTGGTAGACAGAATCACAGGACAGTGGCCCCATACCCCCGGACTGTAGCACTGTaGACTTCTCCACGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: INTEGLGRQNHRTVAPYPRTVAL*TSPRTA Trigger: AGCTGTCCGTGGAGAAGTCCACAGTGCTACAGTCCG...GGGGTATGGGGCCACTGTCCTGTGATTCTGTCTACCAAGACCCTCAGTGTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCTTTTTCCAAAATGCACAGTGGTGGTAATGGAGGAAGTGTTGTCAGGGCGGATGCCCTCTTCTTaGCACAGCGAGTTGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFLFPKCTVVVMEEVLSGRMPSS*HSELPC Trigger: GCAGGGCAACTCGCTGTGCCAAGAAGAGGGCATCCG...CCCTGACAACACTTCCTCCATTACCACCACTGTGCATTTTGGAAAAAGGAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGCGGATGCCCTCTTCTTaGCACAGCGAGTTGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLQSLFSPNKLKGEGEMRMPSS*HSELPC Trigger: GCAGGGCAACTCGCTGTGCCAAGAAGAGGGCATCCG...CATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGGCAAGGTCCCCATCTTaGAGCCCACTATCAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGEARSPS*SPLSGD Trigger: GTCCCCTGATAGTGGGCTCCAAGATGGGGACCTTGC...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | CCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTCCCTCATCAGGAGGATaGTGGTCAGCAGGCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: PETALLMSSPNHNLILIPPSSGG*WSAGTI Trigger: AATGGTGCCTGCTGACCATCATCCTCCTGATGAGGG...AGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGCCCTCATCAGGAGGATaGTGGTCAGCAGGCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGEPSSGG*WSAGTI Trigger: AATGGTGCCTGCTGACCATCATCCTCCTGATGAGGG...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGCAGGAGGCAAGAGTCTaGAGTGCAGCAGACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLQSLFSPNKLKGEGEMQEARV*SAADCW Trigger: CCAGCAGTCTGCTGCACTTCAGACTCTTGCCTCCTG...CATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAGGCTGGGCCGGTTCCTaGCATCTGGAGTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLMSSPNHNLILIPIPASGWAGS*HLESSI Trigger: AATGGAGGACTCCAGATGGCAGGAACCGGCCCAGCC...TGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCCTGCTGGAGCACTTCTCTaGGACAGTTCCAGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQSLFSPNKLKGEGEMGPAGALL*DSSRGW Trigger: CCACCCTCTGGAACTGTCGCAGAGAAGTGCTCCAGC...AGGCCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGGCTGGAGCACTTCTCTaGGACAGTTCCAGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLQSLFSPNKLKGEGEMGAGALL*DSSRGW Trigger: CCACCCTCTGGAACTGTCGCAGAGAAGTGCTCCAGC...CCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGTCTTCCCGGCTCACATaGAGGCAGCACAGAACATCG | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGESSRLT*RQHRTS Trigger: CGATGTTCTGTGCTGCCTGCATGTGAGCCGGGAAGA...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | GTAATGGTAGCTTGGCAGCCTAGAGGGGCCTCTCCAGTCTTTATTCAGTCCCAAAGCACACACTCCTTCTaGGTATCGCTTCCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VMVAWQPRGASPVFIQSQSTHSF*VSLPVQ Trigger: CTGGACAGGAAGCGATACCCAGAAGGAGTGTGTGCT...TTGGGACTGAATAAAGACTGGAGAGGCCCCTCTAGGCTGCCAAGCTACCATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGCGGACTGTAGCACTGTaGACTTCTCCACGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGERTVAL*TSPRTA Trigger: AGCTGTCCGTGGAGAAGTCCACAGTGCTACAGTCCG...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCCTGCAAGGTCCCCATCTTaGAGCCCACTATCAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSLFSPNKLKGEGEMGPARSPS*SPLSGD Trigger: GTCCCCTGATAGTGGGCTCCAAGATGGGGACCTTGC...AGGCCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | CACAGTGGTGGTAATGGAGGAAGTGTTGTCAGGGCAGCAGTAATGGTAGCTTGGCACCAGCACTCCTGGTaGCCTTTTAAAAGCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: HSGGNGGSVVRAAVMVAWHQHSW*PFKSTH Trigger: GTGTGTGCTTTTAAAAGGTCACCAGGAGTGCTGGTG...CCAAGCTACCATTACTGCTGCCCTGACAACACTTCCTCCATTACCACCACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | ATAAACACTGAGGGTCTTGGTAGACAGAATCACAGGACAGTGGCCCCATACCCCCACCAGCACTCCTGGTaGCCTTTTAAAAGCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: INTEGLGRQNHRTVAPYPHQHSW*PFKSTH Trigger: GTGTGTGCTTTTAAAAGGTCACCAGGAGTGCTGGTG...GGGGTATGGGGCCACTGTCCTGTGATTCTGTCTACCAAGACCCTCAGTGTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | CTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAAGCCCCTCATCAGGAGGATaGTGGTCAGCAGGCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: LMSSPNHNLILIPIPASSPSSGG*WSAGTI Trigger: AATGGTGCCTGCTGACCATCATCCTCCTGATGAGGG...GCTTGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCCCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTCAGCATACTCCATCTTaGGAACACTGTTTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LQPRDSSSDEQSKPQPDPQHTPS*EHCFPP Trigger: TGGTGGAAAACAGTGTTCTCAAGATGGAGTATGCTG...AGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGGGCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAACTGTGAGATCCTTGTaGGCCAGGTGCAGCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: LLMSSPNHNLILIPIPASTVRSL*ARCSTR Trigger: GCGTGTGCTGCACCTGGCTCACAAGGATCTCACAGT...TGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAAGCTCACAGGAGGCAAGAGTCTaGAGTGCAGCAGACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSSPNHNLILIPIPASSSQEARV*SAADCW Trigger: CCAGCAGTCTGCTGCACTTCAGACTCTTGCCTCCTG...TGAGCTTGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGACGAGAAAAGCAGACTaGCAGACAGGCCTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLQSLFSPNKLKGEGEMGTRKAD*QTGLFP Trigger: CGGGAAGAGGCCTGTCTGTCAGTCTGCTTTTCTCGT...CCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | TCCAAAATGCACAGTGGTGGTAATGGAGGAAGTGTTGTCAGGGCAGCAGTAATGACGAGAAAAGCAGACTaGCAGACAGGCCTCTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SKMHSGGNGGSVVRAAVMTRKAD*QTGLFP Trigger: CGGGAAGAGGCCTGTCTGTCAGTCTGCTTTTCTCGT...CATTACTGCTGCCCTGACAACACTTCCTCCATTACCACCACTGTGCATTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCCTCTTTTGGCCTCTGCCTaGTCTTCGGACGTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LQSLFSPNKLKGEGEMGPLLASA*SSDVFT Trigger: GGTGAAGACGTCCGAAGAGCAGGCAGAGGCCAAAAG...AGGCCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCAAAACTGATGGTGAACTCAGACCCAGCCCTGGTCCTGACCAGCCATAAAGTAAAGAAGGCATTCTaGACCAACTCCAGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPKLMVNSDPALVLTSHKVKKAF*TNSSSL Trigger: GAGAGAGCTGGAGTTGGTGCAGAATGCCTTCTTTAC...TTTATGGCTGGTCAGGACCAGGGCTGGGTCTGAGTTCACCATCAGTTTTGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | CTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAAGCTCTTCCCGGCTCACATaGAGGCAGCACAGAACATCG | + |
|
Preference number: 4 (lower is better) Translates to: LMSSPNHNLILIPIPASSSSRLT*RQHRTS Trigger: CGATGTTCTGTGCTGCCTGCATGTGAGCCGGGAAGA...GCTTGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGCGGACTGTAGCACTGTaGACTTCTCCACGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLQSLFSPNKLKGEGEMRTVAL*TSPRTA Trigger: AGCTGTCCGTGGAGAAGTCCACAGTGCTACAGTCCG...CATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | ATAAACACTGAGGGTCTTGGTAGACAGAATCACAGGACAGTGGCCCCATACCCCTTGGCTCCCAGAATCTaGCTTGTCAGTTCTAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: INTEGLGRQNHRTVAPYPLAPRI*LVSSRT Trigger: CGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAA...GGGGTATGGGGCCACTGTCCTGTGATTCTGTCTACCAAGACCCTCAGTGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | ATAAACACTGAGGGTCTTGGTAGACAGAATCACAGGACAGTGGCCCCATACCCCTGGCAAAATCAGGGTTaGCTCCCAGAATCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: INTEGLGRQNHRTVAPYPWQNQG*LPESGL Trigger: CAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCA...GGGGTATGGGGCCACTGTCCTGTGATTCTGTCTACCAAGACCCTCAGTGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCCTTCCTCAGGGGACTTCTaGGTTTCTAGCTGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSLFSPNKLKGEGEMGPSSGDF*VSSCWS Trigger: GCTCCAGCAGCTAGAAACCCAGAAGTCCCCTGAGGA...AGGCCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAAGCTCAGCAAGGTCCCCATCTTaGAGCCCACTATCAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MSSPNHNLILIPIPASSSARSPS*SPLSGD Trigger: GTCCCCTGATAGTGGGCTCCAAGATGGGGACCTTGC...TGAGCTTGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGCGGACAGCTCACACCTaGACAACTGTTCATCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLQSLFSPNKLKGEGEMRTAHT*TTVHQW Trigger: CCACTGATGAACAGTTGTTCAGGTGTGAGCTGTCCG...CATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | ATAAACACTGAGGGTCTTGGTAGACAGAATCACAGGACAGTGGCCCCATACCCCACAGGTCAAGATGAGTaGCCAAGAGCAGTTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: INTEGLGRQNHRTVAPYPTGQDE*PRAVVP Trigger: TGGAACAACTGCTCTTGGTCACTCATCTTGACCTGT...GGGGTATGGGGCCACTGTCCTGTGATTCTGTCTACCAAGACCCTCAGTGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | CACAGTGGTGGTAATGGAGGAAGTGTTGTCAGGGCAGCAGTAATGGTAGCTTGGACAGGTCAAGATGAGTaGCCAAGAGCAGTTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSGGNGGSVVRAAVMVAWTGQDE*PRAVVP Trigger: TGGAACAACTGCTCTTGGTCACTCATCTTGACCTGT...CCAAGCTACCATTACTGCTGCCCTGACAACACTTCCTCCATTACCACCACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGTTCTGGGTTTCTAGCTaGTGGAGCACTTCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGEFWVSS*WSTSLR Trigger: TCGCAGAGAAGTGCTCCAGCAGCTAGAAACCCAGAA...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCATCTTCCCGGCTCACATaGAGGCAGCACAGAACATCG | + |
|
Preference number: 4 (lower is better) Translates to: LLMSSPNHNLILIPIPASSSRLT*RQHRTS Trigger: CGATGTTCTGTGCTGCCTGCATGTGAGCCGGGAAGA...TGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGAGCACACACTCCTTCTaGGTATCGCTTCCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLQSLFSPNKLKGEGEMGSTHSF*VSLPVQ Trigger: CTGGACAGGAAGCGATACCCAGAAGGAGTGTGTGCT...CCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCACGGACTGTAGCACTGTaGACTTCTCCACGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLMSSPNHNLILIPIPASRTVAL*TSPRTA Trigger: AGCTGTCCGTGGAGAAGTCCACAGTGCTACAGTCCG...TGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | ATAAACACTGAGGGTCTTGGTAGACAGAATCACAGGACAGTGGCCCCATACCCCAGCAGTTGTTCCAAATaGCAGAGCACTGTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: INTEGLGRQNHRTVAPYPSSCSK*QSTVRS Trigger: GGATCTCACAGTGCTCTGCCATTTGGAACAACTGCT...GGGGTATGGGGCCACTGTCCTGTGATTCTGTCTACCAAGACCCTCAGTGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGTTGGCTCCCAGAATCTaGCTTGTCAGTTCTAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGELAPRI*LVSSRT Trigger: CGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAA...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | AACCTGATCCTAATTCCTATCCCAGCTTCAAGCTCAGGCACCACGATAGCCCAATTGGCTCCCAGAATCTaGCTTGTCAGTTCTAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: NLILIPIPASSSGTTIAQLAPRI*LVSSRT Trigger: CGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAA...TTGGGCTATCGTGGTGCCTGAGCTTGAAGCTGGGATAGGAATTAGGATCAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCATCCTCAGGGGACTTCTaGGTTTCTAGCTGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLMSSPNHNLILIPIPASSSGDF*VSSCWS Trigger: GCTCCAGCAGCTAGAAACCCAGAAGTCCCCTGAGGA...TGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCACCAGCACTCCTGGTaGCCTTTTAAAAGCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: PLQSLFSPNKLKGEGEMGHQHSW*PFKSTH Trigger: GTGTGTGCTTTTAAAAGGTCACCAGGAGTGCTGGTG...CCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGACAGGTCAAGATGAGTaGCCAAGAGCAGTTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGETGQDE*PRAVVP Trigger: TGGAACAACTGCTCTTGGTCACTCATCTTGACCTGT...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | GTAGCTGTCTTCAGACACCAGAAGAGGGTGTCAGATCTTATTACAGATGGTTATCAGGAGGCAAGAGTCTaGAGTGCAGCAGACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAVFRHQKRVSDLITDGYQEARV*SAADCW Trigger: CCAGCAGTCTGCTGCACTTCAGACTCTTGCCTCCTG...ATAACCATCTGTAATAAGATCTGACACCCTCTTCTGGTGTCTGAAGACAGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | TCCAAAATGCACAGTGGTGGTAATGGAGGAAGTGTTGTCAGGGCAGCAGTAATGTTCTGGGTTTCTAGCTaGTGGAGCACTTCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SKMHSGGNGGSVVRAAVMFWVSS*WSTSLR Trigger: TCGCAGAGAAGTGCTCCAGCAGCTAGAAACCCAGAA...CATTACTGCTGCCCTGACAACACTTCCTCCATTACCACCACTGTGCATTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGGTAAAGAAGGCATTCTaGACCAACTCCAGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGEVKKAF*TNSSSL Trigger: GAGAGAGCTGGAGTTGGTGCAGAATGCCTTCTTTAC...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGTGGCAAAATCAGGGTTaGCTCCCAGAATCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLQSLFSPNKLKGEGEMWQNQG*LPESGL Trigger: CAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCA...CATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGACCAATATTGTCATTTGAACCGGGTGGGGCAAGATGCTGTGACACATTCTGGCAAAATCAGGGTTaGCTCCCAGAATCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRPILSFEPGGARCCDTFWQNQG*LPESGL Trigger: CAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCA...GAATGTGTCACAGCATCTTGCCCCACCCGGTTCAAATGACAATATTGGTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
||
| 3UTR CAA 72 bp | ACAGATGGTTATGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACTTTCAGAAGAACAGTCAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGYEPPCGCWD*NSGLSEEQSAL Trigger: GAGCGCTGACTGTTCTTCTGAAAGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCATAACCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCACACCAGCACTCCTGGTaGCCTTTTAAAAGCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLMSSPNHNLILIPIPASHQHSW*PFKSTH Trigger: GTGTGTGCTTTTAAAAGGTCACCAGGAGTGCTGGTG...TGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGCAGCATACTCCATCTTaGGAACACTGTTTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EGPLQSLFSPNKLKGEGEQHTPS*EHCFPP Trigger: TGGTGGAAAACAGTGTTCTCAAGATGGAGTATGCTG...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGTCTTCAGACACCAGAAGAGGGTGTCAGATCTTATTACAGATGGTTATCTTTTGGCCTCTGCCTaGTCTTCGGACGTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VAVFRHQKRVSDLITDGYLLASA*SSDVFT Trigger: GGTGAAGACGTCCGAAGAGCAGGCAGAGGCCAAAAG...ATAACCATCTGTAATAAGATCTGACACCCTCTTCTGGTGTCTGAAGACAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | CTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAAGCGTAAAGAAGGCATTCTaGACCAACTCCAGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LMSSPNHNLILIPIPASSVKKAF*TNSSSL Trigger: GAGAGAGCTGGAGTTGGTGCAGAATGCCTTCTTTAC...GCTTGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCCTAGCAGTTGTTCCAAATaGCAGAGCACTGTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSLFSPNKLKGEGEMGPSSCSK*QSTVRS Trigger: GGATCTCACAGTGCTCTGCCATTTGGAACAACTGCT...AGGCCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCTTTTTCCAAAATGCACAGTGGTGGTAATGGAGGAAGTGTTGTCAGGGAGCAGTTGTTCCAAATaGCAGAGCACTGTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PFLFPKCTVVVMEEVLSGSSCSK*QSTVRS Trigger: GGATCTCACAGTGCTCTGCCATTTGGAACAACTGCT...CCCTGACAACACTTCCTCCATTACCACCACTGTGCATTTTGGAAAAAGGAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGAGCAGTTGTTCCAAATaGCAGAGCACTGTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PLQSLFSPNKLKGEGEMGSSCSK*QSTVRS Trigger: GGATCTCACAGTGCTCTGCCATTTGGAACAACTGCT...CCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGCAGCATACTCCATCTTaGGAACACTGTTTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GPLQSLFSPNKLKGEGEMQHTPS*EHCFPP Trigger: TGGTGGAAAACAGTGTTCTCAAGATGGAGTATGCTG...CATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAAGCTCACAGCATACTCCATCTTaGGAACACTGTTTTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MSSPNHNLILIPIPASSSQHTPS*EHCFPP Trigger: TGGTGGAAAACAGTGTTCTCAAGATGGAGTATGCTG...TGAGCTTGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGTCTTCAGACACCAGAAGAGGGTGTCAGATCTTATTACAGATGGTTATTTCTGGGTTTCTAGCTaGTGGAGCACTTCTCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VAVFRHQKRVSDLITDGYFWVSS*WSTSLR Trigger: TCGCAGAGAAGTGCTCCAGCAGCTAGAAACCCAGAA...ATAACCATCTGTAATAAGATCTGACACCCTCTTCTGGTGTCTGAAGACAGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| 3UTR CAA 72 bp | TTTTCAACCACAGAATGTAATCCACAGAGACCAATATaGTCATTTGAACCGGGTGGGGCAAGATGCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSTTECNPQRPI*SFEPGGARCCD Trigger: GTCACAGCATCTTGCCCCACCCGGTTCAAATGACAATATTGGTCTCTGTGGATTACATTCTGTGGTTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
||
| CDS CCA 90 bp | CGGCCTCGAGGAAGCGAGCGCACAGCTCCAGCTCCCGGGCCCAGTTaGGCTCAGGCAGGCGACTCAGCAGCCAGCAGCGGTGGTGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPRGSERTAPAPGPS*AQAGDSAASSGGAK Trigger: CTTGGCACCACCGCTGCTGGCTGCTGAGTCGCCTGCCTGAGCCCAACTGGGCCCGGGAGCTGGAGCTGTGCGCTCGCTTCCTCGAGGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCCCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAGCTCCCGGGCCCAGTaGGGCTCAGGCAGGCGACTC | + |
|
Preference number: 5 (lower is better) Translates to: LQPRDSSSDEQSKPQPDPSSRAQ*GSGRRL Trigger: GAGTCGCCTGCCTGAGCCCAACTGGGCCCGGGAGCT...AGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGGGCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS GCA 90 bp | AGGTTAGCCACGCCGTCCAAGTTCTCCAGGACATTATCACTGGCCTaGAACACCTCGAGACAGCGCAGAGCAGCCAGGGCTGGGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RLATPSKFSRTLSLA*NTSRQRRAARAGGK Trigger: CTTGCCCCCAGCCCTGGCTGCTCTGCGCTGTCTCGAGGTGTTGCAGGCCAGTGATAATGTCCTGGAGAACTTGGACGGCGTGGCTAACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS GCA 90 bp | AGGCAGCAGGCAGGTCACAGAGCCAGACATGGCTGGGCCGGTTCCTaGCATCTGGAGTCCTCCATTCCACACTCAAAGGTGCCTCGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RQQAGHRARHGWAGS*HLESSIPHSKVPRQ Trigger: TTGACGAGGCACCTTTGAGTGTGGAATGGAGGACTCCAGATGGCAGGAACCGGCCCAGCCATGTCTGGCTCTGTGACCTGCCTGCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | ATAAACACTGAGGGTCTTGGTAGACAGAATCACAGGACAGTGGCCCCATACCCCAGCTCCCGGGCCCAGTaGGGCTCAGGCAGGCGACTC | + |
|
Preference number: 5 (lower is better) Translates to: INTEGLGRQNHRTVAPYPSSRAQ*GSGRRL Trigger: GAGTCGCCTGCCTGAGCCCAACTGGGCCCGGGAGCT...GGGGTATGGGGCCACTGTCCTGTGATTCTGTCTACCAAGACCCTCAGTGTTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGAGCTCCCGGGCCCAGTaGGGCTCAGGCAGGCGACTC | + |
|
Preference number: 5 (lower is better) Translates to: EGPLQSLFSPNKLKGEGESSRAQ*GSGRRL Trigger: GAGTCGCCTGCCTGAGCCCAACTGGGCCCGGGAGCT...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCCCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTGAGTTGCCCTGCAGGTaGAGGAAGACTAGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LQPRDSSSDEQSKPQPDPELPCR*RKTSLG Trigger: CCCCAGGCTAGTCTTCCTCAACCTGCAGGGCAACTC...AGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGGGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS TCA 90 bp | GCTCGGACTGTAGCACTGTGGACTTCTCCACGGACAGCTCACACCTaGACAACTGTTCATCAGTGGCTGAGTCTCGGCACCAGCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ARTVALWTSPRTAHT*TTVHQWLSLGTSTP Trigger: AGGAGTGCTGGTGCCGAGACTCAGCCACTGATGAACAGTTGTTCAGGTGTGAGCTGTCCGTGGAGAAGTCCACAGTGCTACAGTCCGAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS GCA 90 bp | CACTCCTTCTGGGTATCGCTTCCTGTCCAGATGACACGAAACGTGTaGTGGGGCAAGTGGTCATTGAGAGAGGCAGCAGGCAGGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: HSFWVSLPVQMTRNV*WGKWSLREAAGRSQ Trigger: CTGTGACCTGCCTGCTGCCTCTCTCAATGACCACTTGCCCCAGCACACGTTTCGTGTCATCTGGACAGGAAGCGATACCCAGAAGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 90 bp | GTATCGCTTCCTGTCCAGATGACACGAAACGTGTGCTGGGGCAAGTaGTCATTGAGAGAGGCAGCAGGCAGGTCACAGAGCCAGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: VSLPVQMTRNVCWGK*SLREAAGRSQSQTW Trigger: CCATGTCTGGCTCTGTGACCTGCCTGCTGCCTCTCTCAATGACCACTTGCCCCAGCACACGTTTCGTGTCATCTGGACAGGAAGCGATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 90 bp | TCCTTCTGGGTATCGCTTCCTGTCCAGATGACACGAAACGTGTGCTaGGGCAAGTGGTCATTGAGAGAGGCAGCAGGCAGGTCACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFWVSLPVQMTRNVC*GKWSLREAAGRSQS Trigger: GCTCTGTGACCTGCCTGCTGCCTCTCTCAATGACCACTTGCCCCAGCACACGTTTCGTGTCATCTGGACAGGAAGCGATACCCAGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 90 bp | TGGCTGACTGGTAGAGCTTTAGCTTCTGTTCCCGCTCTAGCCTTTTaGCCTCTGCCTGCTCTTCGGACGTCTTCACCTTCAGGCGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WLTGRALASVPALAF*PLPALRTSSPSGAH Trigger: ATGGGCGCCTGAAGGTGAAGACGTCCGAAGAGCAGGCAGAGGCCAAAAGGCTAGAGCGGGAACAGAAGCTAAAGCTCTACCAGTCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 90 bp | CGACAGTTCCAGAGGGTGGCAAAATCAGGGTTGGCTCCCAGAATCTaGCTTGTCAGTTCTAGGACGGATTCATCCAGCTCGCCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQFQRVAKSGLAPRI*LVSSRTDSSSSPAS Trigger: GGAGGCAGGCGAGCTGGATGAATCCGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS TCA 90 bp | CCCTGCAGGTTGAGGAAGACTAGCCTGGGGCAGGAGGCAAGAGTCTaGAGTGCAGCAGACTGCTGGAGGCGGTTATTACATAGTAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PCRLRKTSLGQEARV*SAADCWRRLLHSNS Trigger: GCTGTTACTATGTAATAACCGCCTCCAGCAGTCTGCTGCACTTCAGACTCTTGCCTCCTGCCCCAGGCTAGTCTTCCTCAACCTGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 90 bp | ACAAGAGCAGCCAACTCCTCAGGGGACTTCTGGGTTTCTAGCTGCTaGAGCACTTCTCTGCGACAGTTCCAGAGGGTGGCAAAATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRAANSSGDFWVSSC*STSLRQFQRVAKSG Trigger: CCCTGATTTTGCCACCCTCTGGAACTGTCGCAGAGAAGTGCTCCAGCAGCTAGAAACCCAGAAGTCCCCTGAGGAGTTGGCTGCTCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | ATAAACACTGAGGGTCTTGGTAGACAGAATCACAGGACAGTGGCCCCATACCCCGAGTTGCCCTGCAGGTaGAGGAAGACTAGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: INTEGLGRQNHRTVAPYPELPCR*RKTSLG Trigger: CCCCAGGCTAGTCTTCCTCAACCTGCAGGGCAACTC...GGGGTATGGGGCCACTGTCCTGTGATTCTGTCTACCAAGACCCTCAGTGTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCAAAACTGATGGTGAACTCAGACCCAGCCCTGGTCCTGACCAGCCATAAATCTTGGCACAGCGAGTaGCCCTGCAGGTTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPKLMVNSDPALVLTSHKSWHSE*PCRLRK Trigger: CTTCCTCAACCTGCAGGGCAACTCGCTGTGCCAAGA...TTTATGGCTGGTCAGGACCAGGGCTGGGTCTGAGTTCACCATCAGTTTTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS TCA 90 bp | AGGGCTGGGGGCAAGGCTCGGAGACGATTATGGGACAGGTCAAGATaGGTGACCAAGAGCAGTTGTTCCAAATGGCAGAGCACTGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAGGKARRRLWDRSR*VTKSSCSKWQSTVR Trigger: TCTCACAGTGCTCTGCCATTTGGAACAACTGCTCTTGGTCACTCATCTTGACCTGTCCCATAATCGTCTCCGAGCCTTGCCCCCAGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 90 bp | ATTCATCCAGCTCGCCTGCCTCCCGCTTCTGGAAGACAGCTTGAGTaGCTGACTGGTAGAGCTTTAGCTTCTGTTCCCGCTCTAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHPARLPPASGRQLE*LTGRALASVPALAF Trigger: AAAGGCTAGAGCGGGAACAGAAGCTAAAGCTCTACCAGTCAGCCACTCAAGCTGTCTTCCAGAAGCGGGAGGCAGGCGAGCTGGATGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTTGGGGCAAGTGGTCATaGAGAGAGGCAGCAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PETALLMSSPNHNLILIPWGKWS*REAAGR Trigger: CCTGCCTGCTGCCTCTCTCAATGACCACTTGCCCCA...AGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | ATAAACACTGAGGGTCTTGGTAGACAGAATCACAGGACAGTGGCCCCATACCCCTCTTGGCACAGCGAGTaGCCCTGCAGGTTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: INTEGLGRQNHRTVAPYPSWHSE*PCRLRK Trigger: CTTCCTCAACCTGCAGGGCAACTCGCTGTGCCAAGA...GGGGTATGGGGCCACTGTCCTGTGATTCTGTCTACCAAGACCCTCAGTGTTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS GCA 90 bp | ACTGTTTTCCACCAAGAACTTGCTGCGCAGGTCGTCCAAGTAGGCTaGTCTCATCGGGTCCACAGCTTTGAGGGTACTGAAGTACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVFHQELAAQVVQVG*SHRVHSFEGTEVLQ Trigger: CTGGAGTACTTCAGTACCCTCAAAGCTGTGGACCCGATGAGAGCAGCCTACTTGGACGACCTGCGCAGCAAGTTCTTGGTGGAAAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 90 bp | GGAGCACTTCTCTGCGACAGTTCCAGAGGGTGGCAAAATCAGGGTTaGCTCCCAGAATCTGGCTTGTCAGTTCTAGGACGGATTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GALLCDSSRGWQNQG*LPESGLSVLGRIHP Trigger: TGGATGAATCCGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGTCGCAGAGAAGTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 90 bp | GGGTTTCTAGCTGCTGGAGCACTTCTCTGCGACAGTTCCAGAGGGTaGCAAAATCAGGGTTGGCTCCCAGAATCTGGCTTGTCAGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GFLAAGALLCDSSRG*QNQGWLPESGLSVL Trigger: TAGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGTCGCAGAGAAGTGCTCCAGCAGCTAGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGTGGGGCAAGTGGTCATaGAGAGAGGCAGCAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPLQSLFSPNKLKGEGEMWGKWS*REAAGR Trigger: CCTGCCTGCTGCCTCTCTCAATGACCACTTGCCCCA...CATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGGAGTTGCCCTGCAGGTaGAGGAAGACTAGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLQSLFSPNKLKGEGEMGELPCR*RKTSLG Trigger: CCCCAGGCTAGTCTTCCTCAACCTGCAGGGCAACTC...CCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCCTTCTTGGCACAGCGAGTaGCCCTGCAGGTTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQSLFSPNKLKGEGEMGPSWHSE*PCRLRK Trigger: CTTCCTCAACCTGCAGGGCAACTCGCTGTGCCAAGA...AGGCCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS TCA 90 bp | AACAACTGTTCATCAGTGGCTGAGTCTCGGCACCAGCACTCCTGGTaGCCTTTTAAAAGCACACACTCCTTCTGGGTATCGCTTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NNCSSVAESRHQHSW*PFKSTHSFWVSLPV Trigger: GACAGGAAGCGATACCCAGAAGGAGTGTGTGCTTTTAAAAGGTCACCAGGAGTGCTGGTGCCGAGACTCAGCCACTGATGAACAGTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGTTTTCCACCAAGAACTaGCTGCGCAGGTCGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGPLQSLFSPNKLKGEGEFSTKN*LRRSSK Trigger: CTTGGACGACCTGCGCAGCAAGTTCTTGGTGGAAAA...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCCCCGAGACAGCTCTTCTGATGAGCAGTCCAAACCACAACCTGATCCTTCAGCATACTCCATCTaGAGAACACTGTTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LQPRDSSSDEQSKPQPDPSAYSI*RTLFST Trigger: GGTGGAAAACAGTGTTCTCAAGATGGAGTATGCTGA...AGGATCAGGTTGTGGTTTGGACTGCTCATCAGAAGAGCTGTCTCGGGGCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | GTAATGGTAGCTTGGCAGCCTAGAGGGGCCTCTCCAGTCTTTATTCAGTCCCAAAGTGACCAAGAGCAGTaGTTCCAAATGGCAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VMVAWQPRGASPVFIQSQSDQEQ*FQMAEH Trigger: GTGCTCTGCCATTTGGAACAACTGCTCTTGGTCACT...TTGGGACTGAATAAAGACTGGAGAGGCCCCTCTAGGCTGCCAAGCTACCATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGTTTTCCACCAAGAACTaGCTGCGCAGGTCGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLQSLFSPNKLKGEGEMGFSTKN*LRRSSK Trigger: CTTGGACGACCTGCGCAGCAAGTTCTTGGTGGAAAA...CCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGCCTTTTTCCACCAAGAACTaGCTGCGCAGGTCGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQSLFSPNKLKGEGEMGPFSTKN*LRRSSK Trigger: CTTGGACGACCTGCGCAGCAAGTTCTTGGTGGAAAA...AGGCCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGAGTGACCAAGAGCAGTaGTTCCAAATGGCAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EGPLQSLFSPNKLKGEGESDQEQ*FQMAEH Trigger: GTGCTCTGCCATTTGGAACAACTGCTCTTGGTCACT...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | GTAGCTGTCTTCAGACACCAGAAGAGGGTGTCAGATCTTATTACAGATGGTTATGAGTTGCCCTGCAGGTaGAGGAAGACTAGCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAVFRHQKRVSDLITDGYELPCR*RKTSLG Trigger: CCCCAGGCTAGTCTTCCTCAACCTGCAGGGCAACTC...ATAACCATCTGTAATAAGATCTGACACCCTCTTCTGGTGTCTGAAGACAGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGACACCAGAAGAGGGTGTCAGATCTTATTACAGATGGTTATGAGCCACCATCTTGGCACAGCGAGTaGCCCTGCAGGTTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FRHQKRVSDLITDGYEPPSWHSE*PCRLRK Trigger: CTTCCTCAACCTGCAGGGCAACTCGCTGTGCCAAGA...TGGTGGCTCATAACCATCTGTAATAAGATCTGACACCCTCTTCTGGTGTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGCTCCCAGAATCTGGCTaGTCAGTTCTAGGACGGATT | + |
|
Preference number: 5 (lower is better) Translates to: EGPLQSLFSPNKLKGEGELPESG*SVLGRI Trigger: AATCCGTCCTAGAACTGACAAGCCAGATTCTGGGAG...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGTGGCAAAATCAGGGTaGGCTCCCAGAATCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPLQSLFSPNKLKGEGEMVAKSG*APRIWL Trigger: AAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCAC...CATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAGGTGGCAGGCTCACAGGAGAAAGGTTCACAGTCTTTTCCAGCTAGAGACTCAGCATACTCCATCTaGAGAACACTGTTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LKVAGSQEKGSQSFPARDSAYSI*RTLFST Trigger: GGTGGAAAACAGTGTTCTCAAGATGGAGTATGCTGA...GTCTCTAGCTGGAAAAGACTGTGAACCTTTCTCCTGTGAGCCTGCCACCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGAGTGACCAAGAGCAGTaGTTCCAAATGGCAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLQSLFSPNKLKGEGEMGSDQEQ*FQMAEH Trigger: GTGCTCTGCCATTTGGAACAACTGCTCTTGGTCACT...CCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CTAGAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTCTCCCAGAATCTGGCTaGTCAGTTCTAGGACGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LEGPLQSLFSPNKLKGEGLPESG*SVLGRI Trigger: AATCCGTCCTAGAACTGACAAGCCAGATTCTGGGAG...ACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGTCAGCATACTCCATCTaGAGAACACTGTTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: EGPLQSLFSPNKLKGEGESAYSI*RTLFST Trigger: GGTGGAAAACAGTGTTCTCAAGATGGAGTATGCTGA...CTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGGCCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGCAGTCCAAACCACAACCTGATCCTAATTCCTATCCCAGCTTCAAGCTCAAGTGACCAAGAGCAGTaGTTCCAAATGGCAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: MSSPNHNLILIPIPASSSSDQEQ*FQMAEH Trigger: GTGCTCTGCCATTTGGAACAACTGCTCTTGGTCACT...TGAGCTTGAAGCTGGGATAGGAATTAGGATCAGGTTGTGGTTTGGACTGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062861.15 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCAGTCTTTATTCAGTCCCAATAAGTTAAAGGGTGAGGGTGAGATGGGGTCAGCATACTCCATCTaGAGAACACTGTTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PLQSLFSPNKLKGEGEMGSAYSI*RTLFST Trigger: GGTGGAAAACAGTGTTCTCAAGATGGAGTATGCTGA...CCCCATCTCACCCTCACCCTTTAACTTATTGGGACTGAATAAAGACTGGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | GTAGCTGTCTTCAGACACCAGAAGAGGGTGTCAGATCTTATTACAGATGGTTATGTGGCAAAATCAGGGTaGGCTCCCAGAATCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VAVFRHQKRVSDLITDGYVAKSG*APRIWL Trigger: AAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCAC...ATAACCATCTGTAATAAGATCTGACACCCTCTTCTGGTGTCTGAAGACAGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS-3UTR CAA 90 bp | TTCCCAAGGGCTTTTCAACCACAGAATGTAATCCACAGAGACCAATATTGTCATCTCCCAGAATCTGGCTaGTCAGTTCTAGGACGGATT | + |
|
Preference number: 5 (lower is better) Translates to: FPRAFQPQNVIHRDQYCHLPESG*SVLGRI Trigger: AATCCGTCCTAGAACTGACAAGCCAGATTCTGGGAG...ATGACAATATTGGTCTCTGTGGATTACATTCTGTGGTTGAAAAGCCCTTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227061.2 |
||
| CDS CCA 72 bp | GGAAGCGAGCGCACAGCTCCAGCTCCCGGGCCCAGTTaGGCTCAGGCAGGCGACTCAGCAGCCAGCAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSERTAPAPGPS*AQAGDSAASSG Trigger: ACCGCTGCTGGCTGCTGAGTCGCCTGCCTGAGCCCAACTGGGCCCGGGAGCTGGAGCTGTGCGCTCGCTTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CAA 72 bp | AGGAAGCGAGCGCACAGCTCCAGCTCCCGGGCCCAGTaGGGCTCAGGCAGGCGACTCAGCAGCCAGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RKRAHSSSSRAQ*GSGRRLSSQQR Trigger: CCGCTGCTGGCTGCTGAGTCGCCTGCCTGAGCCCAACTGGGCCCGGGAGCTGGAGCTGTGCGCTCGCTTCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CAA 90 bp | TCGGCCTCGAGGAAGCGAGCGCACAGCTCCAGCTCCCGGGCCCAGTaGGGCTCAGGCAGGCGACTCAGCAGCCAGCAGCGGTGGTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SASRKRAHSSSSRAQ*GSGRRLSSQQRWCQ Trigger: TTGGCACCACCGCTGCTGGCTGCTGAGTCGCCTGCCTGAGCCCAACTGGGCCCGGGAGCTGGAGCTGTGCGCTCGCTTCCTCGAGGCCGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS GCA 72 bp | AAGCAGACTGACAGACAGGCCTCTTCCCGGCTCACATaGAGGCAGCACAGAACATCGTGGGGCTCCGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: KQTDRQASSRLT*RQHRTSWGSAR Trigger: GCGGGCGGAGCCCCACGATGTTCTGTGCTGCCTGCATGTGAGCCGGGAAGAGGCCTGTCTGTCAGTCTGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS GCA 72 bp | ACGCCGTCCAAGTTCTCCAGGACATTATCACTGGCCTaGAACACCTCGAGACAGCGCAGAGCAGCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TPSKFSRTLSLA*NTSRQRRAARA Trigger: AGCCCTGGCTGCTCTGCGCTGTCTCGAGGTGTTGCAGGCCAGTGATAATGTCCTGGAGAACTTGGACGGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS GCA 72 bp | AGCTTCTGTTCCCGCTCTAGCCTTTTGGCCTCTGCCTaGTCTTCGGACGTCTTCACCTTCAGGCGCCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SFCSRSSLLASA*SSDVFTFRRPC Trigger: GCATGGGCGCCTGAAGGTGAAGACGTCCGAAGAGCAGGCAGAGGCCAAAAGGCTAGAGCGGGAACAGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS GCA 72 bp | GCAGCCAACTCCTCAGGGGACTTCTGGGTTTCTAGCTaGTGGAGCACTTCTCTGCGACAGTTCCAGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AANSSGDFWVSS*WSTSLRQFQRV Trigger: CACCCTCTGGAACTGTCGCAGAGAAGTGCTCCAGCAGCTAGAAACCCAGAAGTCCCCTGAGGAGTTGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 72 bp | CCTGTCCAGATGACACGAAACGTGTGCTGGGGCAAGTaGTCATTGAGAGAGGCAGCAGGCAGGTCACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PVQMTRNVCWGK*SLREAAGRSQS Trigger: GCTCTGTGACCTGCCTGCTGCCTCTCTCAATGACCACTTGCCCCAGCACACGTTTCGTGTCATCTGGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 72 bp | AGCATCTCAGCCAAACGCTCCCGGATGCCCTCTTCTTaGCACAGCGAGTTGCCCTGCAGGTTGAGGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: SISAKRSRMPSS*HSELPCRLRKT Trigger: AGTCTTCCTCAACCTGCAGGGCAACTCGCTGTGCCAAGAAGAGGGCATCCGGGAGCGTTTGGCTGAGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 72 bp | GCTCGCCTGCCTCCCGCTTCTGGAAGACAGCTTGAGTaGCTGACTGGTAGAGCTTTAGCTTCTGTTCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARLPPASGRQLE*LTGRALASVPA Trigger: AGCGGGAACAGAAGCTAAAGCTCTACCAGTCAGCCACTCAAGCTGTCTTCCAGAAGCGGGAGGCAGGCGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 72 bp | GCCAACTCCTCAGGGGACTTCTGGGTTTCTAGCTGCTaGAGCACTTCTCTGCGACAGTTCCAGAGGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ANSSGDFWVSSC*STSLRQFQRVA Trigger: TGCCACCCTCTGGAACTGTCGCAGAGAAGTGCTCCAGCAGCTAGAAACCCAGAAGTCCCCTGAGGAGTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CAA 90 bp | AGTTCCAGAGGGTGGCAAAATCAGGGTTGGCTCCCAGAATCTGGCTaGTCAGTTCTAGGACGGATTCATCCAGCTCGCCTGCCTCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRGWQNQGWLPESG*SVLGRIHPARLPPA Trigger: AGCGGGAGGCAGGCGAGCTGGATGAATCCGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS TCA 72 bp | CGTAGAGGAGGGGGTCCAGTGCCCTCATCAGGAGGATaGTGGTCAGCAGGCACCATTTATTCTCAGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRGGGPVPSSGG*WSAGTIYSQAP Trigger: TGGAGCCTGAGAATAAATGGTGCCTGCTGACCATCATCCTCCTGATGAGGGCACTGGACCCCCTCCTCTACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS GCA 72 bp | TGGGTATCGCTTCCTGTCCAGATGACACGAAACGTGTaGTGGGGCAAGTGGTCATTGAGAGAGGCAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WVSLPVQMTRNV*WGKWSLREAAG Trigger: GCCTGCTGCCTCTCTCAATGACCACTTGCCCCAGCACACGTTTCGTGTCATCTGGACAGGAAGCGATACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS CCA 72 bp | GTATCGCTTCCTGTCCAGATGACACGAAACGTGTGCTaGGGCAAGTGGTCATTGAGAGAGGCAGCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSLPVQMTRNVC*GKWSLREAAGR Trigger: CCTGCCTGCTGCCTCTCTCAATGACCACTTGCCCCAGCACACGTTTCGTGTCATCTGGACAGGAAGCGATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
||
| CDS TCA 72 bp | GTAGCACTGTGGACTTCTCCACGGACAGCTCACACCTaGACAACTGTTCATCAGTGGCTGAGTCTCGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: VALWTSPRTAHT*TTVHQWLSLGT Trigger: GGTGCCGAGACTCAGCCACTGATGAACAGTTGTTCAGGTGTGAGCTGTCCGTGGAGAAGTCCACAGTGCTAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS GCA 72 bp | CACCAAGAACTTGCTGCGCAGGTCGTCCAAGTAGGCTaGTCTCATCGGGTCCACAGCTTTGAGGGTACTGAA | + |
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Preference number: 6 (lower is better) Translates to: HQELAAQVVQVG*SHRVHSFEGTE Trigger: TTCAGTACCCTCAAAGCTGTGGACCCGATGAGAGCAGCCTACTTGGACGACCTGCGCAGCAAGTTCTTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS CCA 72 bp | CTCTGCGACAGTTCCAGAGGGTGGCAAAATCAGGGTTaGCTCCCAGAATCTGGCTTGTCAGTTCTAGGACGG | + |
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Preference number: 6 (lower is better) Translates to: LCDSSRGWQNQG*LPESGLSVLGR Trigger: CCGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGTCGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS CAA 72 bp | GGGTGGCAAAATCAGGGTTGGCTCCCAGAATCTGGCTaGTCAGTTCTAGGACGGATTCATCCAGCTCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GWQNQGWLPESG*SVLGRIHPARL Trigger: CAGGCGAGCTGGATGAATCCGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS CCA 72 bp | CAGAGGGTGGCAAAATCAGGGTTGGCTCCCAGAATCTaGCTTGTCAGTTCTAGGACGGATTCATCCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: QRVAKSGLAPRI*LVSSRTDSSSS Trigger: CGAGCTGGATGAATCCGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS CAA 72 bp | GCCAGGTGCAGCACACGCACGTCAGCATACTCCATCTaGAGAACACTGTTTTCCACCAAGAACTTGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: ARCSTRTSAYSI*RTLFSTKNLLR Trigger: GCGCAGCAAGTTCTTGGTGGAAAACAGTGTTCTCAAGATGGAGTATGCTGACGTGCGTGTGCTGCACCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS CAA 72 bp | TCTCTGCGACAGTTCCAGAGGGTGGCAAAATCAGGGTaGGCTCCCAGAATCTGGCTTGTCAGTTCTAGGACG | + |
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Preference number: 6 (lower is better) Translates to: SLRQFQRVAKSG*APRIWLVSSRT Trigger: CGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGTCGCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS CAA 90 bp | TGGAGCACTTCTCTGCGACAGTTCCAGAGGGTGGCAAAATCAGGGTaGGCTCCCAGAATCTGGCTTGTCAGTTCTAGGACGGATTCATCC | + |
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Preference number: 6 (lower is better) Translates to: WSTSLRQFQRVAKSG*APRIWLVSSRTDSS Trigger: GGATGAATCCGTCCTAGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGTCGCAGAGAAGTGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS TCA 72 bp | TCATCAGTGGCTGAGTCTCGGCACCAGCACTCCTGGTaGCCTTTTAAAAGCACACACTCCTTCTGGGTATCG | + |
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Preference number: 6 (lower is better) Translates to: SSVAESRHQHSW*PFKSTHSFWVS Trigger: CGATACCCAGAAGGAGTGTGTGCTTTTAAAAGGTCACCAGGAGTGCTGGTGCCGAGACTCAGCCACTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS TCA 72 bp | CCAGGTGCAGCACACGCACGTCAGCATACTCCATCTTaGGAACACTGTTTTCCACCAAGAACTTGCTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: PGAAHARQHTPS*EHCFPPRTCCA Trigger: TGCGCAGCAAGTTCTTGGTGGAAAACAGTGTTCTCAAGATGGAGTATGCTGACGTGCGTGTGCTGCACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS CAA 90 bp | TCGGAGACGATTATGGGACAGGTCAAGATGAGTGACCAAGAGCAGTaGTTCCAAATGGCAGAGCACTGTGAGATCCTTGTGAGCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SETIMGQVKMSDQEQ*FQMAEHCEILVSQV Trigger: CACCTGGCTCACAAGGATCTCACAGTGCTCTGCCATTTGGAACAACTGCTCTTGGTCACTCATCTTGACCTGTCCCATAATCGTCTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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| CDS CAA 72 bp | ATTATGGGACAGGTCAAGATGAGTGACCAAGAGCAGTaGTTCCAAATGGCAGAGCACTGTGAGATCCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: IMGQVKMSDQEQ*FQMAEHCEILV Trigger: CACAAGGATCTCACAGTGCTCTGCCATTTGGAACAACTGCTCTTGGTCACTCATCTTGACCTGTCCCATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062861.15 ENSMUST00000163889.3 ENSMUST00000169237.8 ENSMUST00000227061.2 |
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