Pregenerated sensors for RABEPK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070953Ensembl transcript IDs: ENSMUST00000047963.7, ENSMUST00000113086.9, ENSMUST00000118108.2, ENSMUST00000140663.8, ENSMUST00000141099.2, ENSMUST00000145903.8
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGAAGGAAGCTGGCATGCTCGTACCGAGGCAAGAGGCCCTCCCTaGTGGCCGTGTCCCACTGGTGTGTTCCCAAGTCCATGGTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: REGSWHARTEARGPP*WPCPTGVFPSPWCV Trigger: TACACACCATGGACTTGGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTGCCTCGGTACGAGCATGCCAGCTTCCTTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR CCA 90 bp | GAAGGAAGCTGGCATGCTCGTACCGAGGCAAGAGGCCCTCCCTGGTaGCCGTGTCCCACTGGTGTGTTCCCAAGTCCATGGTGTGTACAT | + |
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Preference number: 1 (lower is better) Translates to: EGSWHARTEARGPPW*PCPTGVFPSPWCVH Trigger: ATGTACACACCATGGACTTGGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTGCCTCGGTACGAGCATGCCAGCTTCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR GCA 90 bp | CTTGTCCCCTGCCAATCCTCCGTGGATGAAGAGTTTTGTGCCCGCTaGCACCATCACATGGCCATGCCGAGGAGACGGAGGACTTCCATG | + |
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Preference number: 1 (lower is better) Translates to: LVPCQSSVDEEFCAR*HHHMAMPRRRRTSM Trigger: CATGGAAGTCCTCCGTCTCCTCGGCATGGCCATGTGATGGTGGCAGCGGGCACAAAACTCTTCATCCACGGAGGATTGGCAGGGGACAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR CCA 90 bp | TGCTCGTACCGAGGCAAGAGGCCCTCCCTGGTGGCCGTGTCCCACTaGTGTGTTCCCAAGTCCATGGTGTGTACATCTGAGAAACTTTGG | + |
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Preference number: 1 (lower is better) Translates to: CSYRGKRPSLVAVSH*CVPKSMVCTSEKLW Trigger: CCAAAGTTTCTCAGATGTACACACCATGGACTTGGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTGCCTCGGTACGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR CCA 90 bp | GCTAATGTGGTATGGGAATTGAACTCAAGACCTTCGGAAGAGCGCTaGTGCTCTTACCCACTGGGCCACTTTGCCAGCCTCACCCCCACC | + |
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Preference number: 1 (lower is better) Translates to: ANVVWELNSRPSEER*CSYPLGHFASLTPT Trigger: GGTGGGGGTGAGGCTGGCAAAGTGGCCCAGTGGGTAAGAGCACCAGCGCTCTTCCGAAGGTCTTGAGTTCAATTCCCATACCACATTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
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| 3UTR CCA 90 bp | GGCCCTCCCTGGTGGCCGTGTCCCACTGGTGTGTTCCCAAGTCCATaGTGTGTACATCTGAGAAACTTTGGTTTGGATTTGCTCCCCCGA | + |
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Preference number: 1 (lower is better) Translates to: GPPWWPCPTGVFPSP*CVHLRNFGLDLLPR Trigger: TCGGGGGAGCAAATCCAAACCAAAGTTTCTCAGATGTACACACCATGGACTTGGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR CCA 90 bp | TTGGTTTCCGATAGCTGCGGACGATGTGTGGAATGTTCTTGGGGATaGAGGGGAGCCAGTCACTTCTGGTGTGCTCCACGTCCTGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LVSDSCGRCVECSWG*RGASHFWCAPRPVF Trigger: GAAGACAGGACGTGGAGCACACCAGAAGTGACTGGCTCCCCTCCATCCCCAAGAACATTCCACACATCGTCCGCAGCTATCGGAAACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047963.7 ENSMUST00000140663.8 |
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| 3UTR GCA 90 bp | CGGAGGACTTCCATGTGTCTCCGGTTGAGACCATGTCAGAGTGTTTaGGTCAAATACATGCAACTTCACGTCCTCCACAGGCTGGGCACC | + |
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Preference number: 1 (lower is better) Translates to: RRTSMCLRLRPCQSV*VKYMQLHVLHRLGT Trigger: GGTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGCAAACACTCTGACATGGTCTCAACCGGAGACACATGGAAGTCCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047963.7 ENSMUST00000141099.2 |
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| 3UTR CCA 90 bp | ATGTTCAGTGCTCCAGTGGCTGTCATACCTCCAAACATATATACATaGTGTCCCACAGCAACGGCGGCATGGGCAGCACAGCCGACTGGA | + |
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Preference number: 1 (lower is better) Translates to: MFSAPVAVIPPNIYT*CPTATAAWAAQPTG Trigger: TCCAGTCGGCTGTGCTGCCCATGCCGCCGTTGCTGTGGGACACCATGTATATATGTTTGGAGGTATGACAGCCACTGGAGCACTGAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR TCA 90 bp | AATGGAGATCATCAAAGAACTTGTCCCCTGCCAATCCTCCGTGGATaGAGAGTTTTGTGCCCGCTGCCACCATCACATGGCCATGCCGAG | + |
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Preference number: 1 (lower is better) Translates to: NGDHQRTCPLPILRG*RVLCPLPPSHGHAE Trigger: CTCGGCATGGCCATGTGATGGTGGCAGCGGGCACAAAACTCTTCATCCACGGAGGATTGGCAGGGGACAAGTTCTTTGATGATCTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR TCA 90 bp | AATCGAACCCAGGGCACTGCATACACTGCACTGCACTGCACACACTaGGTACATGCTTTACCTTTGAGCCACACCCAACCGAGAGTCACC | + |
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Preference number: 1 (lower is better) Translates to: NRTQGTAYTALHCTH*VHALPLSHTQPRVT Trigger: GGTGACTCTCGGTTGGGTGTGGCTCAAAGGTAAAGCATGTACTCAGTGTGTGCAGTGCAGTGCAGTGTATGCAGTGCCCTGGGTTCGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR CCA 90 bp | CCCATACTTGCGTCAAATACATGCAACTTCACGTCCTCCACAGGCTaGGCACCTCTCTCTCCTCCCCCAAAGACGTATAGTTGGTTTCCG | + |
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Preference number: 1 (lower is better) Translates to: PILASNTCNFTSSTG*APLSPPPKTYSWFP Trigger: CGGAAACCAACTATACGTCTTTGGGGGAGGAGAGAGAGGTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGCAAGTATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR TCA 90 bp | ACATGGCCATGCCGAGGAGACGGAGGACTTCCATGTGTCTCCGGTTaGGACCATGTCAGAGTGTTTGCGTCAAATACATGCAACTTCACG | + |
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Preference number: 1 (lower is better) Translates to: TWPCRGDGGLPCVSG*DHVRVFASNTCNFT Trigger: CGTGAAGTTGCATGTATTTGACGCAAACACTCTGACATGGTCTCAACCGGAGACACATGGAAGTCCTCCGTCTCCTCGGCATGGCCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR GCA 90 bp | CCAGGGCACTGCATACACTGCACTGCACTGCACACACTGAGTACATaGTTTACCTTTGAGCCACACCCAACCGAGAGTCACCACCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: PGHCIHCTALHTLST*FTFEPHPTESHHLF Trigger: AAAAAGGTGGTGACTCTCGGTTGGGTGTGGCTCAAAGGTAAAGCATGTACTCAGTGTGTGCAGTGCAGTGCAGTGTATGCAGTGCCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR CCA 90 bp | AGAGTGTTTGCGTCAAATACATGCAACTTCACGTCCTCCACAGGCTaGGCACCTCTCTCTCCTCCCCCAAAGACGTATAGTTGGTTTCCG | + |
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Preference number: 1 (lower is better) Translates to: RVFASNTCNFTSSTG*APLSPPPKTYSWFP Trigger: CGGAAACCAACTATACGTCTTTGGGGGAGGAGAGAGAGGTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGCAAACACTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047963.7 ENSMUST00000141099.2 |
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| 3UTR CCA 90 bp | ATGCAATGGAGATCATCAAAGAACTTGTCCCCTGCCAATCCTCCGTaGATGAAGAGTTTTGTGCCCGCTGCCACCATCACATGGCCATGC | + |
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Preference number: 1 (lower is better) Translates to: MQWRSSKNLSPANPP*MKSFVPAATITWPC Trigger: GCATGGCCATGTGATGGTGGCAGCGGGCACAAAACTCTTCATCCACGGAGGATTGGCAGGGGACAAGTTCTTTGATGATCTCCATTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR TCA 90 bp | GGCCGTGTCCCACTGGTGTGTTCCCAAGTCCATGGTGTGTACATCTaGGAAACTTTGGTTTGGATTTGCTCCCCCGACAATGAAGATCTT | + |
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Preference number: 1 (lower is better) Translates to: GRVPLVCSQVHGVYI*ETLVWICSPDNEDL Trigger: AAGATCTTCATTGTCGGGGGAGCAAATCCAAACCAAAGTTTCTCAGATGTACACACCATGGACTTGGGAACACACCAGTGGGACACGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR GCA 90 bp | GCTTTTGAGAGGTACAGGAAATCGAACCCAGGGCACTGCATACACTaGACTGCACTGCACACACTGAGTACATGCTTTACCTTTGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: AFERYRKSNPGHCIH*TALHTLSTCFTFEP Trigger: TGGCTCAAAGGTAAAGCATGTACTCAGTGTGTGCAGTGCAGTGCAGTGTATGCAGTGCCCTGGGTTCGATTTCCTGTACCTCTCAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR CCA 90 bp | CACTGGTGTGTTCCCAAGTCCATGGTGTGTACATCTGAGAAACTTTaGTTTGGATTTGCTCCCCCGACAATGAAGATCTTCCCGCTCTCG | + |
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Preference number: 1 (lower is better) Translates to: HWCVPKSMVCTSEKL*FGFAPPTMKIFPLS Trigger: CGAGAGCGGGAAGATCTTCATTGTCGGGGGAGCAAATCCAAACCAAAGTTTCTCAGATGTACACACCATGGACTTGGGAACACACCAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR GCA 90 bp | GTCACCTATATCAATGCAATGGAGATCATCAAAGAACTTGTCCCCTaGCAATCCTCCGTGGATGAAGAGTTTTGTGCCCGCTGCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: VTYINAMEIIKELVP*QSSVDEEFCARCHH Trigger: ATGGTGGCAGCGGGCACAAAACTCTTCATCCACGGAGGATTGGCAGGGGACAAGTTCTTTGATGATCTCCATTGCATTGATATAGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR GCA 90 bp | AGAACTATGAAGACCAGGCTGACCTCAAATTCGAAGAGATCCGCCTaGTTCCACCGCATAGGGCTGGGATTAAAGACATGTGCCAATACA | + |
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Preference number: 1 (lower is better) Translates to: RTMKTRLTSNSKRSA*FHRIGLGLKTCANT Trigger: TGTATTGGCACATGTCTTTAATCCCAGCCCTATGCGGTGGAAGCAGGCGGATCTCTTCGAATTTGAGGTCAGCCTGGTCTTCATAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR TCA 90 bp | ACTCTACTTAGTGTAAAATCTTTTCTCAAGTCCCTGTCTCCTGTTTaGGAGATAAGTGAAGCTGAGGTGGCCCTGGCCAGGAAAGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: TLLSVKSFLKSLSPV*EISEAEVALARKAA Trigger: GGCTGCTTTCCTGGCCAGGGCCACCTCAGCTTCACTTATCTCTCAAACAGGAGACAGGGACTTGAGAAAAGATTTTACACTAAGTAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR TCA 90 bp | CATACACTGCACTGCACTGCACACACTGAGTACATGCTTTACCTTTaGGCCACACCCAACCGAGAGTCACCACCTTTTTGTCATTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: HTLHCTAHTEYMLYL*ATPNRESPPFCHCL Trigger: AAGACAATGACAAAAAGGTGGTGACTCTCGGTTGGGTGTGGCTCAAAGGTAAAGCATGTACTCAGTGTGTGCAGTGCAGTGCAGTGTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR TCA 90 bp | AATATGCCCACACCTGAACAAGGTTTAGGGGAGGTACATATTCTGTaGACACCCAGTCATTGTGATTATGAACCAAATAAGGATCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: NMPTPEQGLGEVHIL*TPSHCDYEPNKDLP Trigger: TGGGAGATCCTTATTTGGTTCATAATCACAATGACTGGGTGTTCACAGAATATGTACCTCCCCTAAACCTTGTTCAGGTGTGGGCATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
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| 3UTR GCA 90 bp | ACACCCAGTCATTGTGATTATGAACCAAATAAGGATCTCCCACACTaGTCTTGTAACTGCTATCTTTCTAGCCTCCTGCCTGTACTTTTT | + |
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Preference number: 1 (lower is better) Translates to: TPSHCDYEPNKDLPH*SCNCYLSSLLPVLF Trigger: AAAAAGTACAGGCAGGAGGCTAGAAAGATAGCAGTTACAAGAGCAGTGTGGGAGATCCTTATTTGGTTCATAATCACAATGACTGGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAGTCGTCCAGCGGGTAGGGAAGTGTCAAACTGAAGTACAGTCCAGTGCTACGTCCTCCACAGGCTaGGCACCTCTCTCTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: GPVVQRVGKCQTEVQSSATSSTG*APLSPP Trigger: GGGAGGAGAGAGAGGTGCCCAGCCTGTGGAGGACGT...AGCACTGGACTGTACTTCAGTTTGACACTTCCCTACCCGCTGGACGACTGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCCACCATCACATGGCCATGCCGAGGAGACGGAGGACTTCCATGTGTCTCCGTGTGTGGAATGTTCTTaGGGATGGAGGGGAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LPPSHGHAEETEDFHVSPCVECS*GWRGAS Trigger: ACTGGCTCCCCTCCATCCCCAAGAACATTCCACACA...CGGAGACACATGGAAGTCCTCCGTCTCCTCGGCATGGCCATGTGATGGTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR CAA 90 bp | TGGCCAGGAAAGCAGCCCCAAGATCCCTATGTCCCCAGCCCATACTaGCGTCAAATACATGCAACTTCACGTCCTCCACAGGCTGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: WPGKQPQDPYVPSPY*RQIHATSRPPQAGH Trigger: GTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGCAAGTATGGGCTGGGGACATAGGGATCTTGGGGCTGCTTTCCTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR-3UTR GCA 90 bp | CCGTGGATGAAGAGTTTTGTGCCCGCTGCCACCATCACATGGCCATGCCGAGGACAGTCACTTCTGGTGTaGTCCACGTCCTGTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PWMKSFVPAATITWPCRGQSLLV*STSCLQ Trigger: CTGAAGACAGGACGTGGAGCACACCAGAAGTGACTG...TCCTCGGCATGGCCATGTGATGGTGGCAGCGGGCACAAAACTCTTCATCCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTGGTGGCCGTGTCCCACTGGTGTGTTCCCAAGTCCATGGTGTGTACATCCAGTCACTTCTGGTGTaGTCCACGTCCTGTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LPGGRVPLVCSQVHGVYIQSLLV*STSCLQ Trigger: CTGAAGACAGGACGTGGAGCACACCAGAAGTGACTG...GATGTACACACCATGGACTTGGGAACACACCAGTGGGACACGGCCACCAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGACCAGGCTGACCTCAAATTCGAAGAGATCCGCCTGCTTCCACCGCATAACGTCCTCCACAGGCTaGGCACCTCTCTCTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: MKTRLTSNSKRSACFHRITSSTG*APLSPP Trigger: GGGAGGAGAGAGAGGTGCCCAGCCTGTGGAGGACGT...TATGCGGTGGAAGCAGGCGGATCTCTTCGAATTTGAGGTCAGCCTGGTCTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCTGGGCACCTCTCTCTCCTCCCCCAAAGACGTATAGTTGGTTTCCGATATTGCTCCCCCGACAATaGAGATCTTCCCGCTCTCGG | + |
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Preference number: 2 (lower is better) Translates to: TGWAPLSPPPKTYSWFPILLPRQ*RSSRSR Trigger: CCGAGAGCGGGAAGATCTTCATTGTCGGGGGAGCAA...TATCGGAAACCAACTATACGTCTTTGGGGGAGGAGAGAGAGGTGCCCAGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCGTCAAATACATGCAACTTCACGTCCTCCACAGGCTGGGCACCTCTCTCGGAGCCAGTCACTTCTaGTGTGCTCCACGTCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: TCVKYMQLHVLHRLGTSLGASHF*CAPRPV Trigger: GACAGGACGTGGAGCACACCAGAAGTGACTGGCTCC...GAGAGAGGTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGGAAGAGCACTGCCATCTCTCCAGTCCCCGTCTCACTCTTGAGATTCATGTGTGCTACTATGCCTaGTGTGCACCACCGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: PLEEHCHLSSPRLTLEIHVCYYA*CAPPHW Trigger: CCAGTGCGGTGGTGCACACCAGGCATAGTAGCACAC...ATGAATCTCAAGAGTGAGACGGGGACTGGAGAGATGGCAGTGCTCTTCCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGTTTCCGATAGCTGCGGACGATGTGTGGAATGTTCTTGGGGATGGAGGGGAATGTTCTTGGGGATaGAGGGGAGCCAGTCACTTC | + |
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Preference number: 2 (lower is better) Translates to: SWFPIAADDVWNVLGDGGECSWG*RGASHF Trigger: GAAGTGACTGGCTCCCCTCCATCCCCAAGAACATTC...CCCTCCATCCCCAAGAACATTCCACACATCGTCCGCAGCTATCGGAAACCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000047963.7 ENSMUST00000140663.8 ENSMUST00000141099.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGGAAGAGCACTGCCATCTCTCCAGTCCCCGTCTCACTCTTGAGATTCATACTCAGGAGGCTGACTaGGGCAGGATTATAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PLEEHCHLSSPRLTLEIHTQEAD*GRIIAS Trigger: ACTTGCTATAATCCTGCCTCAGTCAGCCTCCTGAGT...ATGAATCTCAAGAGTGAGACGGGGACTGGAGAGATGGCAGTGCTCTTCCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGTCATACCTCCAAACATATATACATGGTGTCCCACAGCAACGGCGGCATGAGTTTTGTGCCCGCTaGCACCATCACATGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: WLSYLQTYIHGVPQQRRHEFCAR*HHHMAM Trigger: CATGGCCATGTGATGGTGGCAGCGGGCACAAAACTC...ATGCCGCCGTTGCTGTGGGACACCATGTATATATGTTTGGAGGTATGACAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR-3UTR GCA 90 bp | CTCCAAACATATATACATGGTGTCCCACAGCAACGGCGGCATGGGCAGCACAGCAAAGAACTTGTCCCCTaGCAATCCTCCGTGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: LQTYIHGVPQQRRHGQHSKELVP*QSSVDE Trigger: TTCATCCACGGAGGATTGGCAGGGGACAAGTTCTTT...GCTGTGCTGCCCATGCCGCCGTTGCTGTGGGACACCATGTATATATGTTTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR-3UTR CCA 90 bp | TATGAAGACCAGGCTGACCTCAAATTCGAAGAGATCCGCCTGCTTCCACCGCATTGTGTGGAATGTTCTTaGGGATGGAGGGGAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: YEDQADLKFEEIRLLPPHCVECS*GWRGAS Trigger: ACTGGCTCCCCTCCATCCCCAAGAACATTCCACACA...ATGCGGTGGAAGCAGGCGGATCTCTTCGAATTTGAGGTCAGCCTGGTCTTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTCTCTCGACTGCTGGGATTATAGACACTCATCTGCCATTGCGCTTGGTCGCTGCGGACGATGTGTaGAATGTTCTTGGGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: PSLSTAGIIDTHLPLRLVAADDV*NVLGDG Trigger: TCCATCCCCAAGAACATTCCACACATCGTCCGCAGC...GACCAAGCGCAATGGCAGATGAGTGTCTATAATCCCAGCAGTCGAGAGACTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTGCTCCAGTGGCTGTCATACCTCCAAACATATATACATGGTGTCCCACAGGAGCCAGTCACTTCTaGTGTGCTCCACGTCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: FSAPVAVIPPNIYTWCPTGASHF*CAPRPV Trigger: GACAGGACGTGGAGCACACCAGAAGTGACTGGCTCC...TGTGGGACACCATGTATATATGTTTGGAGGTATGACAGCCACTGGAGCACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCTATGTCCCCAGCCCATACTTGCGTCAAATACATGCAACTTCACGTCCGAATGTTCTTGGGGATaGAGGGGAGCCAGTCACTTC | + |
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Preference number: 2 (lower is better) Translates to: RSLCPQPILASNTCNFTSECSWG*RGASHF Trigger: GAAGTGACTGGCTCCCCTCCATCCCCAAGAACATTC...GGACGTGAAGTTGCATGTATTTGACGCAAGTATGGGCTGGGGACATAGGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCTCCAGTGGCTGTCATACCTCCAAACATATATACATGGTGTCCCACAGCGCTGCGGACGATGTGTaGAATGTTCTTGGGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: QCSSGCHTSKHIYMVSHSAADDV*NVLGDG Trigger: TCCATCCCCAAGAACATTCCACACATCGTCCGCAGC...GCTGTGGGACACCATGTATATATGTTTGGAGGTATGACAGCCACTGGAGCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCAACCACCGCACTGGGATaGGAGAATATATTGTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: PHPLSPITSRVLLHRHAPTTALG*ENILCK Trigger: TTTGCACAATATATTCTCTCATCCCAGTGCGGTGGT...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGTAGGGAAGTGTCAAACTGAAGTACAGTCCAGTGCTGCTTTTCTGTGTGATGAATGTTCTTGGGGATaGAGGGGAGCCAGTCACTTC | + |
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Preference number: 2 (lower is better) Translates to: RVGKCQTEVQSSAAFLCDECSWG*RGASHF Trigger: GAAGTGACTGGCTCCCCTCCATCCCCAAGAACATTC...ATCACACAGAAAAGCAGCACTGGACTGTACTTCAGTTTGACACTTCCCTACCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
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| 3UTR-3UTR CCA 90 bp | TATAGTTGGTTTCCGATAGCTGCGGACGATGTGTGGAATGTTCTTGGGGATGGAGCTGCGGACGATGTGTaGAATGTTCTTGGGGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: YSWFPIAADDVWNVLGDGAADDV*NVLGDG Trigger: TCCATCCCCAAGAACATTCCACACATCGTCCGCAGC...TCCATCCCCAAGAACATTCCACACATCGTCCGCAGCTATCGGAAACCAACTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047963.7 ENSMUST00000140663.8 ENSMUST00000141099.2 |
||
| 3UTR CAA 90 bp | GACCTCTGGAAGAGCACTGCCATCTCTCCAGTCCCCGTCTCACTCTaGAGATTCATTTTTGTACACTACCTGATACACTTTGAACCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: DLWKSTAISPVPVSL*RFIFVHYLIHFEPS Trigger: GCTGGGTTCAAAGTGTATCAGGTAGTGTACAAAAATGAATCTCAAGAGTGAGACGGGGACTGGAGAGATGGCAGTGCTCTTCCAGAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCAGAGGTACATATTCTGTaGACACCCAGTCATTGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: PHPLSPITSRVLLHRHAPEVHIL*TPSHCD Trigger: ATCACAATGACTGGGTGTTCACAGAATATGTACCTC...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR-3UTR GCA 90 bp | ACGTATAGTTGGTTTCCGATAGCTGCGGACGATGTGTGGAATGTTCTTGGGGATTTGGTTTCCGATAGCTaGGGACGATGTGTGGAATGT | + |
|
Preference number: 2 (lower is better) Translates to: TYSWFPIAADDVWNVLGDLVSDS*GRCVEC Trigger: ACATTCCACACATCGTCCGCAGCTATCGGAAACCAA...ATCCCCAAGAACATTCCACACATCGTCCGCAGCTATCGGAAACCAACTATACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047963.7 ENSMUST00000140663.8 ENSMUST00000141099.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTGGTTTCCGATAGCTGCGGACGATGTGTGGAATGTTCTTGGGGATGGAGGGCCATGTCAGAGTGTTTaGGTCAAATACATGCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: SWFPIAADDVWNVLGDGGPCQSV*VKYMQL Trigger: AAGTTGCATGTATTTGACGCAAACACTCTGACATGG...CCCTCCATCCCCAAGAACATTCCACACATCGTCCGCAGCTATCGGAAACCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047963.7 ENSMUST00000141099.2 |
||
| 3UTR-3UTR GCA 90 bp | ATACACTGCACTGCACTGCACACACTGAGTACATGCTTTACCTTTGAGCCACACGTGTACAGGGTTTGGTaGATGCTAGACAAGGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: IHCTALHTLSTCFTFEPHVYRVW*MLDKDS Trigger: AGAGTCCTTGTCTAGCATGCACCAAACCCTGTACAC...GTGTGGCTCAAAGGTAAAGCATGTACTCAGTGTGTGCAGTGCAGTGCAGTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR-3UTR CCA 90 bp | AATATGTTTATACTGTGGTTATCATTTTCCCAAGATCAAGAAGCCAGCTTGGTGCCACGTAGACCAGGCTaGCCTCTGCCTCCCAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: NMFILWLSFSQDQEASLVPRRPG*PLPPKC Trigger: GCACTTGGGAGGCAGAGGCCAGCCTGGTCTACGTGG...CACCAAGCTGGCTTCTTGATCTTGGGAAAATGATAACCACAGTATAAACATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR-3UTR CCA 90 bp | TATAGTTGGTTTCCGATAGCTGCGGACGATGTGTGGAATGTTCTTGGGGATGGATTTCGATTTCCTGACTaGTCTGCACCTCCAAACACC | + |
|
Preference number: 2 (lower is better) Translates to: YSWFPIAADDVWNVLGDGFRFPD*SAPPNT Trigger: GGTGTTTGGAGGTGCAGACCAGTCAGGAAATCGAAA...TCCATCCCCAAGAACATTCCACACATCGTCCGCAGCTATCGGAAACCAACTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR-3UTR TCA 90 bp | TATGAAGACCAGGCTGACCTCAAATTCGAAGAGATCCGCCTGCTTCCACCGCATCATGGTGTGTACATCTaGGAAACTTTGGTTTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: YEDQADLKFEEIRLLPPHHGVYI*ETLVWI Trigger: AATCCAAACCAAAGTTTCTCAGATGTACACACCATG...ATGCGGTGGAAGCAGGCGGATCTCTTCGAATTTGAGGTCAGCCTGGTCTTCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTACATCATCTGTCTTACTCCCATTCATACTTCCTAAAAGGGGAGAGAGGAGCTGCTGGGTCCAGGGATaGTTAATAACAAGAGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: STSSVLLPFILPKRGERSCWVQG*LITRAS Trigger: ACTGGCTCTTGTTATTAACCATCCCTGGACCCAGCA...GCTCCTCTCTCCCCTTTTAGGAAGTATGAATGGGAGTAAGACAGATGATGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CAA 90 bp | TGTAATCCTAGCACACTGGGACACCGAGGCAGGAGGATGATAAATTaGAGGCCAGCCTATGCTGTCAGATTTTTCTATCAAACACAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: CNPSTLGHRGRRMIN*RPAYAVRFFYQTQV Trigger: TACTTGTGTTTGATAGAAAAATCTGACAGCATAGGCTGGCCTCAAATTTATCATCCTCCTGCCTCGGTGTCCCAGTGTGCTAGGATTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR-3UTR TCA 90 bp | CTACTCAGATTTAGATGTCTAAGGCCAAATATGGTCAAGGACTCAAGGTTAAGACTTCACTCAGGAGGCTaGCTGAGGCAGGATTATAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLRFRCLRPNMVKDSRLRLHSGG*LRQDYS Trigger: GCTATAATCCTGCCTCAGTCAGCCTCCTGAGTGAAG...TCTTAACCTTGAGTCCTTGACCATATTTGGCCTTAGACATCTAAATCTGAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR-3UTR TCA 90 bp | CTACTCAGATTTAGATGTCTAAGGCCAAATATGGTCAAGGACTCAAGGTTAAGAGTGGTTGATGGGAATTaGATTCAGGACCTCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLRFRCLRPNMVKDSRLRVVDGN*IQDLWK Trigger: CTTCCAGAGGTCCTGAATTCAATTCCCATCAACCAC...TCTTAACCTTGAGTCCTTGACCATATTTGGCCTTAGACATCTAAATCTGAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCACCTATATCAATGCAATGGAGATCATCAAAGAACTTGTCCCCTGCCAATCCCCATGTCAGAGTGTTTaGGTCAAATACATGCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: VTYINAMEIIKELVPCQSPCQSV*VKYMQL Trigger: AAGTTGCATGTATTTGACGCAAACACTCTGACATGG...GGATTGGCAGGGGACAAGTTCTTTGATGATCTCCATTGCATTGATATAGGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGGTACATATTCTGTGAACACCCAGTCATTGTGATTATGAACCAAATAAGGTGTGCAAAAAGTATTTaGCAGTGTAGCTCGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GRYIFCEHPVIVIMNQIRCAKSI*QCSSAE Trigger: CTCTGCCGAGCTACACTGCCAAATACTTTTTGCACA...CCTTATTTGGTTCATAATCACAATGACTGGGTGTTCACAGAATATGTACCTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR-3UTR CCA 90 bp | ATATGTTTATACTGTGGTTATCATTTTCCCAAGATCAAGAAGCCAGCTTGGTGGCTCCAATACCTAGCTTaGGTATCTACAGATTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: ICLYCGYHFPKIKKPAWWLQYLA*VSTDFI Trigger: AATAAAATCTGTAGATACCCAAGCTAGGTATTGGAG...CCACCAAGCTGGCTTCTTGATCTTGGGAAAATGATAACCACAGTATAAACATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CCA 72 bp | CAAGACCTTCGGAAGAGCGCTGGTGCTCTTACCCACTaGGCCACTTTGCCAGCCTCACCCCCACCCCGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QDLRKSAGALTH*ATLPASPPPRL Trigger: GAGACGGGGTGGGGGTGAGGCTGGCAAAGTGGCCCAGTGGGTAAGAGCACCAGCGCTCTTCCGAAGGTCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CCA 72 bp | TGGCATGCTCGTACCGAGGCAAGAGGCCCTCCCTGGTaGCCGTGTCCCACTGGTGTGTTCCCAAGTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: WHARTEARGPPW*PCPTGVFPSPW Trigger: CCATGGACTTGGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTGCCTCGGTACGAGCATGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR CCA 72 bp | AGCTGGCATGCTCGTACCGAGGCAAGAGGCCCTCCCTaGTGGCCGTGTCCCACTGGTGTGTTCCCAAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SWHARTEARGPP*WPCPTGVFPSP Trigger: TGGACTTGGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTGCCTCGGTACGAGCATGCCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR CCA 72 bp | CGAGGCAAGAGGCCCTCCCTGGTGGCCGTGTCCCACTaGTGTGTTCCCAAGTCCATGGTGTGTACATCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RGKRPSLVAVSH*CVPKSMVCTSE Trigger: CTCAGATGTACACACCATGGACTTGGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTGCCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR GCA 72 bp | TGCCAATCCTCCGTGGATGAAGAGTTTTGTGCCCGCTaGCACCATCACATGGCCATGCCGAGGAGACGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CQSSVDEEFCAR*HHHMAMPRRRR Trigger: CCTCCGTCTCCTCGGCATGGCCATGTGATGGTGGCAGCGGGCACAAAACTCTTCATCCACGGAGGATTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR CCA 72 bp | AACATATATACATGGTGTCCCACAGCAACGGCGGCATaGGCAGCACAGCCGACTGGAACAGCCCCGGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NIYTWCPTATAA*AAQPTGTAPVG Trigger: TCCCACCGGGGCTGTTCCAGTCGGCTGTGCTGCCCATGCCGCCGTTGCTGTGGGACACCATGTATATATGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR GCA 72 bp | AAGAGTTTTGTGCCCGCTGCCACCATCACATGGCCATaGCGAGGAGACGGAGGACTTCCATGTGTCTCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: KSFVPAATITWP*RGDGGLPCVSG Trigger: ACCGGAGACACATGGAAGTCCTCCGTCTCCTCGGCATGGCCATGTGATGGTGGCAGCGGGCACAAAACTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR GCA 72 bp | TGGGAATTGAACTCAAGACCTTCGGAAGAGCGCTGGTaGTCTTACCCACTGGGCCACTTTGCCAGCCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: WELNSRPSEERW*SYPLGHFASLT Trigger: GGTGAGGCTGGCAAAGTGGCCCAGTGGGTAAGAGCACCAGCGCTCTTCCGAAGGTCTTGAGTTCAATTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CCA 72 bp | TGGATGAAGAGTTTTGTGCCCGCTGCCACCATCACATaGCCATGCCGAGGAGACGGAGGACTTCCATGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: WMKSFVPAATIT*PCRGDGGLPCV Trigger: GACACATGGAAGTCCTCCGTCTCCTCGGCATGGCCATGTGATGGTGGCAGCGGGCACAAAACTCTTCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR GCA 72 bp | TCCCTATGTCCCCAGCCCATACTTGCGTCAAATACATaGAACTTCACGTCCTCCACAGGCTGGGCACCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLCPQPILASNT*NFTSSTGWAPL Trigger: GAGAGGTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGCAAGTATGGGCTGGGGACATAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR CCA 72 bp | GCTCCAGTGGCTGTCATACCTCCAAACATATATACATaGTGTCCCACAGCAACGGCGGCATGGGCAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: APVAVIPPNIYT*CPTATAAWAAQ Trigger: CTGTGCTGCCCATGCCGCCGTTGCTGTGGGACACCATGTATATATGTTTGGAGGTATGACAGCCACTGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR CCA 72 bp | GTAGACATCACTGGCCATGGGATGACACACATGGAGTaGTCCAGTCGTCCAGCGGGTAGGGAAGTGTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VDITGHGMTHME*SSRPAGREVSN Trigger: GTTTGACACTTCCCTACCCGCTGGACGACTGGACCACTCCATGTGTGTCATCCCATGGCCAGTGATGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR CCA 72 bp | GTATGGGAATTGAACTCAAGACCTTCGGAAGAGCGCTaGTGCTCTTACCCACTGGGCCACTTTGCCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VWELNSRPSEER*CSYPLGHFASL Trigger: GAGGCTGGCAAAGTGGCCCAGTGGGTAAGAGCACCAGCGCTCTTCCGAAGGTCTTGAGTTCAATTCCCATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR TCA 72 bp | CATCAAAGAACTTGTCCCCTGCCAATCCTCCGTGGATaGAGAGTTTTGTGCCCGCTGCCACCATCACATGGC | + |
|
Preference number: 3 (lower is better) Translates to: HQRTCPLPILRG*RVLCPLPPSHG Trigger: GCCATGTGATGGTGGCAGCGGGCACAAAACTCTTCATCCACGGAGGATTGGCAGGGGACAAGTTCTTTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR CCA 72 bp | GCGTCAAATACATGCAACTTCACGTCCTCCACAGGCTaGGCACCTCTCTCTCCTCCCCCAAAGACGTATAGT | + |
|
Preference number: 3 (lower is better) Translates to: ASNTCNFTSSTG*APLSPPPKTYS Trigger: ACTATACGTCTTTGGGGGAGGAGAGAGAGGTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047963.7 ENSMUST00000140663.8 ENSMUST00000141099.2 |
||
| 3UTR TCA 72 bp | TGCCGAGGAGACGGAGGACTTCCATGTGTCTCCGGTTaGGACCATGTCAGAGTGTTTGCGTCAAATACATGC | + |
|
Preference number: 3 (lower is better) Translates to: CRGDGGLPCVSG*DHVRVFASNTC Trigger: GCATGTATTTGACGCAAACACTCTGACATGGTCTCAACCGGAGACACATGGAAGTCCTCCGTCTCCTCGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047963.7 ENSMUST00000141099.2 |
||
| 3UTR GCA 72 bp | GGTGTGCTCCACGTCCTGTCTTCAGGACTCATGACTTaGAGACAGTTTCGATTTCCTGACTGGTCTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: GVLHVLSSGLMT*RQFRFPDWSAP Trigger: AGGTGCAGACCAGTCAGGAAATCGAAACTGTCTGCAAGTCATGAGTCCTGAAGACAGGACGTGGAGCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR CCA 72 bp | TGGGCACCTCTCTCTCCTCCCCCAAAGACGTATAGTTaGTTTCCGATAGCTGCGGACGATGTGTGGAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: WAPLSPPPKTYS*FPIAADDVWNV Trigger: AACATTCCACACATCGTCCGCAGCTATCGGAAACCAACTATACGTCTTTGGGGGAGGAGAGAGAGGTGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047963.7 ENSMUST00000140663.8 ENSMUST00000141099.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGTCACTTCTGGTGTGCTCCACGTCCTGTCTTCAGGACTCATGACTTGCAGCTGAGAAACTTTGGTTaGGATTTGCTCCCCCGACAA | + |
|
Preference number: 3 (lower is better) Translates to: ASHFWCAPRPVFRTHDLQLRNFG*DLLPRQ Trigger: TTGTCGGGGGAGCAAATCCAAACCAAAGTTTCTCAG...CTGCAAGTCATGAGTCCTGAAGACAGGACGTGGAGCACACCAGAAGTGACTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATGTTTATACTGTGGTTATCATTTTCCCAAGATCAAGAAGCCAGCTTGGTGGACCCACTGGGCCACTTaGCCAGCCTCACCCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: ICLYCGYHFPKIKKPAWWTHWAT*PASPPP Trigger: GGGTGGGGGTGAGGCTGGCAAAGTGGCCCAGTGGGT...CCACCAAGCTGGCTTCTTGATCTTGGGAAAATGATAACCACAGTATAAACATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR TCA 72 bp | CTTCTGGTGTGCTCCACGTCCTGTCTTCAGGACTCATaGCTTGCAGACAGTTTCGATTTCCTGACTGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLVCSTSCLQDS*LADSFDFLTGL Trigger: CAGACCAGTCAGGAAATCGAAACTGTCTGCAAGTCATGAGTCCTGAAGACAGGACGTGGAGCACACCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR GCA 72 bp | AAGACCAGGCTGACCTCAAATTCGAAGAGATCCGCCTaGTTCCACCGCATAGGGCTGGGATTAAAGACATGT | + |
|
Preference number: 3 (lower is better) Translates to: KTRLTSNSKRSA*FHRIGLGLKTC Trigger: ACATGTCTTTAATCCCAGCCCTATGCGGTGGAAGCAGGCGGATCTCTTCGAATTTGAGGTCAGCCTGGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR GCA 72 bp | AGGTACAGGAAATCGAACCCAGGGCACTGCATACACTaGACTGCACTGCACACACTGAGTACATGCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: RYRKSNPGHCIH*TALHTLSTCFT Trigger: GGTAAAGCATGTACTCAGTGTGTGCAGTGCAGTGCAGTGTATGCAGTGCCCTGGGTTCGATTTCCTGTACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR CCA 72 bp | AGATCATCAAAGAACTTGTCCCCTGCCAATCCTCCGTaGATGAAGAGTTTTGTGCCCGCTGCCACCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: RSSKNLSPANPP*MKSFVPAATIT Trigger: TGTGATGGTGGCAGCGGGCACAAAACTCTTCATCCACGGAGGATTGGCAGGGGACAAGTTCTTTGATGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR-3UTR CAA 90 bp | ACTATGAAGACCAGGCTGACCTCAAATTCGAAGAGATCCGCCTGCTTCCACCGCTTCAGGACTCATGACTaGCAGACAGTTTCGATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TMKTRLTSNSKRSACFHRFRTHD*QTVSIS Trigger: GGAAATCGAAACTGTCTGCAAGTCATGAGTCCTGAA...GCGGTGGAAGCAGGCGGATCTCTTCGAATTTGAGGTCAGCCTGGTCTTCATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR TCA 72 bp | CACTGCACTGCACACACTGAGTACATGCTTTACCTTTaGGCCACACCCAACCGAGAGTCACCACCTTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HCTAHTEYMLYL*ATPNRESPPFC Trigger: ACAAAAAGGTGGTGACTCTCGGTTGGGTGTGGCTCAAAGGTAAAGCATGTACTCAGTGTGTGCAGTGCAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR CCA 72 bp | TGGTGGCCGTGTCCCACTGGTGTGTTCCCAAGTCCATaGTGTGTACATCTGAGAAACTTTGGTTTGGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: WWPCPTGVFPSP*CVHLRNFGLDL Trigger: CAAATCCAAACCAAAGTTTCTCAGATGTACACACCATGGACTTGGGAACACACCAGTGGGACACGGCCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR TCA 72 bp | AGTGTAAAATCTTTTCTCAAGTCCCTGTCTCCTGTTTaGGAGATAAGTGAAGCTGAGGTGGCCCTGGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SVKSFLKSLSPV*EISEAEVALAR Trigger: CCTGGCCAGGGCCACCTCAGCTTCACTTATCTCTCAAACAGGAGACAGGGACTTGAGAAAAGATTTTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR GCA 72 bp | ATCAATGCAATGGAGATCATCAAAGAACTTGTCCCCTaGCAATCCTCCGTGGATGAAGAGTTTTGTGCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: INAMEIIKELVP*QSSVDEEFCAR Trigger: GCGGGCACAAAACTCTTCATCCACGGAGGATTGGCAGGGGACAAGTTCTTTGATGATCTCCATTGCATTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR TCA 72 bp | GTGCTACTATGCCTGGTGTGCACCACCGCACTGGGATaGGAGAATATATTGTGCAAAAAGTATTTGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLLCLVCTTALG*ENILCKKYLAV Trigger: CACTGCCAAATACTTTTTGCACAATATATTCTCTCATCCCAGTGCGGTGGTGCACACCAGGCATAGTAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR TCA 72 bp | GAAGATTTTTGTCCAGGGCTAATGTGGTATGGGAATTaGACTCAAGACCTTCGGAAGAGCGCTGGTGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: EDFCPGLMWYGN*TQDLRKSAGAL Trigger: AAGAGCACCAGCGCTCTTCCGAAGGTCTTGAGTTCAATTCCCATACCACATTAGCCCTGGACAAAAATCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CCA 72 bp | GGTGTGTGCTACTATGCCTGGTGTGCACCACCGCACTaGGATGAGAGAATATATTGTGCAAAAAGTATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GVCYYAWCAPPH*DERIYCAKSIW Trigger: CCAAATACTTTTTGCACAATATATTCTCTCATCCCAGTGCGGTGGTGCACACCAGGCATAGTAGCACACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR-3UTR CAA 90 bp | ATACACTGCACTGCACTGCACACACTGAGTACATGCTTTACCTTTGAGCCACACACCACCTTTTTGTCATaGTCTTTTGAGACAGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: IHCTALHTLSTCFTFEPHTTFLS*SFETGS Trigger: AGACCCTGTCTCAAAAGACAATGACAAAAAGGTGGT...GTGTGGCTCAAAGGTAAAGCATGTACTCAGTGTGTGCAGTGCAGTGCAGTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| 3UTR CCA 72 bp | GCAAAAATCCCTGGGGTTTATCATGATCTTGTAGACTaGACACTTGACTTGGCTCAGTTGGTCAGTAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: AKIPGVYHDLVD*TLDLAQLVSRV Trigger: CACTCTACTGACCAACTGAGCCAAGTCAAGTGTCCAGTCTACAAGATCATGATAAACCCCAGGGATTTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR TCA 72 bp | GCTCATGCTACTTATTTCTTCACTCAGGAGGCTGACTaGGGCAGGATTATAGCAAGTTCACAGTTACACCTT | + |
|
Preference number: 3 (lower is better) Translates to: AHATYFFTQEAD*GRIIASSQLHL Trigger: AAGGTGTAACTGTGAACTTGCTATAATCCTGCCTCAGTCAGCCTCCTGAGTGAAGAAATAAGTAGCATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR GCA 72 bp | CATTGTGATTATGAACCAAATAAGGATCTCCCACACTaGTCTTGTAACTGCTATCTTTCTAGCCTCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HCDYEPNKDLPH*SCNCYLSSLLP Trigger: AGGCAGGAGGCTAGAAAGATAGCAGTTACAAGAGCAGTGTGGGAGATCCTTATTTGGTTCATAATCACAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR GCA 72 bp | CCGAGGCAGGAGGATGATAAATTTGAGGCCAGCCTATaGTGTCAGATTTTTCTATCAAACACAAGTATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PRQEDDKFEASL*CQIFLSNTSIW Trigger: CCAAATACTTGTGTTTGATAGAAAAATCTGACAGCATAGGCTGGCCTCAAATTTATCATCCTCCTGCCTCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR TCA 72 bp | CTTGAGATTCATTTTTGTACACTACCTGATACACTTTaGACCCAGCTTGGGCTTGGTAGCTCATGCTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: LEIHFCTLPDTL*TQLGLGSSCYL Trigger: TAAGTAGCATGAGCTACCAAGCCCAAGCTGGGTTCAAAGTGTATCAGGTAGTGTACAAAAATGAATCTCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR GCA 72 bp | CTGCTTTTCTGTGTGATACTTGTACATCATGTTCAGTaGTCCAGTGGCTGTCATACCTCCAAACATATATAC | + |
|
Preference number: 3 (lower is better) Translates to: LLFCVILVHHVQ*SSGCHTSKHIY Trigger: GTATATATGTTTGGAGGTATGACAGCCACTGGAGCACTGAACATGATGTACAAGTATCACACAGAAAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR TCA 72 bp | ACACCTGAACAAGGTTTAGGGGAGGTACATATTCTGTaGACACCCAGTCATTGTGATTATGAACCAAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: TPEQGLGEVHIL*TPSHCDYEPNK Trigger: CTTATTTGGTTCATAATCACAATGACTGGGTGTTCACAGAATATGTACCTCCCCTAAACCTTGTTCAGGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR TCA 72 bp | CTGAGGCAGGATTATAGCAAGTTCACAGTTACACCTTaGGATTCTTTCTACATCATCTGTCTTACTCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LRQDYSKFTVTP*DSFYIICLTPI Trigger: AATGGGAGTAAGACAGATGATGTAGAAAGAATCTCAAGGTGTAACTGTGAACTTGCTATAATCCTGCCTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR GCA 72 bp | CCAAGTGAAATGTTAAAATTGATTTGTACAACTTCATaGTGGGTCCAGGGATGGTTAATAACAAGAGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PSEMLKLICTTS*WVQGWLITRAS Trigger: ACTGGCTCTTGTTATTAACCATCCCTGGACCCAGCATGAAGTTGTACAAATCAATTTTAACATTTCACTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CCA 72 bp | AGTGAAATGTTAAAATTGATTTGTACAACTTCATGCTaGGTCCAGGGATGGTTAATAACAAGAGCCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SEMLKLICTTSC*VQGWLITRASP Trigger: AGGACTGGCTCTTGTTATTAACCATCCCTGGACCCAGCATGAAGTTGTACAAATCAATTTTAACATTTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CCA 72 bp | TGTCTAACTCGTAATTGTCTACTCCAATACCTAGCTTaGGTATCTACAGATTTTATTGCTGGTAAAACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: CLTRNCLLQYLA*VSTDFIAGKTL Trigger: TAAAGTTTTACCAGCAATAAAATCTGTAGATACCCAAGCTAGGTATTGGAGTAGACAATTACGAGTTAGACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | CACCACGTAGACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGACGTCCTCCACAGGCTaGGCACCTCTCTCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HHVDQAGLCLPSAGIKGVTSSTG*APLSPP Trigger: GGGAGGAGAGAGAGGTGCCCAGCCTGTGGAGGACGT...CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTCTACGTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR TCA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCATGGGCAGCTGCTTCATaGTGCCCTGCCGCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLSPITSRVLLHRHAPWAAAS*CPAAAP Trigger: GGGGGCTGCGGCAGGGCATCATGAAGCAGCTGCCCA...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCAGGCAGCACAGCCGACTaGAACAGCCCCGGTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLSPITSRVLLHRHAPGSTAD*NSPGGT Trigger: GGTCCCACCGGGGCTGTTCCAGTCGGCTGTGCTGCC...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR TCA 90 bp | CACCACGTAGACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTTGCTCCCCCGACAATaGAGATCTTCCCGCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HHVDQAGLCLPSAGIKGVLLPRQ*RSSRSR Trigger: CCGAGAGCGGGAAGATCTTCATTGTCGGGGGAGCAA...CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTCTACGTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR TCA 90 bp | GACAGTTTCGATTTCCTGACTGGTCTGCACCTCCAAACACCCAGATGCTGTGAGTGGGCAGCTGCTTCATaGTGCCCTGCCGCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSFDFLTGLHLQTPRCCEWAAAS*CPAAAP Trigger: GGGGGCTGCGGCAGGGCATCATGAAGCAGCTGCCCA...CTCACAGCATCTGGGTGTTTGGAGGTGCAGACCAGTCAGGAAATCGAAACTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| CDS-3UTR TCA 90 bp | CACCACGTAGACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTCACTGGCCATGGGATaGCACACATGGAGTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HHVDQAGLCLPSAGIKGVSLAMG*HTWSGP Trigger: TGGACCACTCCATGTGTGTCATCCCATGGCCAGTGA...CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTCTACGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCAAAGACGTATAGTTGGTTTCCGATAGCTGCGGACGATGTGTGGAATGTTTGGGCAGCTGCTTCATaGTGCCCTGCCGCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPKTYSWFPIAADDVWNVWAAAS*CPAAAP Trigger: GGGGGCTGCGGCAGGGCATCATGAAGCAGCTGCCCA...AACATTCCACACATCGTCCGCAGCTATCGGAAACCAACTATACGTCTTTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140663.8 ENSMUST00000141099.2 |
||
| CDS-3UTR CCA 90 bp | CACCACGTAGACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGAAATATGAGCAGCTGTaGCCAACTCGAGGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HHVDQAGLCLPSAGIKGVKYEQL*PTRGQG Trigger: GCCCTGCCCTCGAGTTGGCCACAGCTGCTCATATTT...CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTCTACGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCACTGGAACAGCCCCGGTaGGACCAAGCTTCTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPLSPITSRVLLHRHAPLEQPR*DQASAS Trigger: GCTGGCAGAAGCTTGGTCCCACCGGGGCTGTTCCAG...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCTACTATAGGAGGGAAGGAAGCTaGCATGCTCGTACCGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQAGLCLPSAGIKGVCYYRREGS*HARTEA Trigger: TGCCTCGGTACGAGCATGCCAGCTTCCTTCCCTCCT...ATAGTAGCACACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | CACCACGTAGACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGTGTGGAATGTTCTTaGGGATGGAGGGGAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HHVDQAGLCLPSAGIKGVCVECS*GWRGAS Trigger: ACTGGCTCCCCTCCATCCCCAAGAACATTCCACACA...CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTCTACGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTGGAAGAGCACTGCCATCTCTCCAGTCCCCGTCTCACTCTTGAGATTCATAACACCCAGATGCTGTaGGGAGAGCAGGAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLEEHCHLSSPRLTLEIHNTQML*GEQEGR Trigger: CCTTCCCTCCTGCTCTCCTCACAGCATCTGGGTGTT...ATGAATCTCAAGAGTGAGACGGGGACTGGAGAGATGGCAGTGCTCTTCCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCCTCCCCCAAAGACGTATAGTTGGTTTCCGATAGCTGCGGACGATGTGAGGAGGGAAGGAAGCTaGCATGCTCGTACCGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPPPKTYSWFPIAADDVRREGS*HARTEA Trigger: TGCCTCGGTACGAGCATGCCAGCTTCCTTCCCTCCT...CACATCGTCCGCAGCTATCGGAAACCAACTATACGTCTTTGGGGGAGGAGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS-3UTR CCA 90 bp | GCGTCAAATACATGCAACTTCACGTCCTCCACAGGCTGGGCACCTCTCTCTCCTTCCATGTGGCTTTCCTaGGCTTGTCTCCAGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASNTCNFTSSTGWAPLSPSMWLS*ACLQAP Trigger: TGGAGCCTGGAGACAAGCCCAGGAAAGCCACATGGA...AGGAGAGAGAGGTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS-3UTR TCA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCACCAATCCTCCGTGGATaGAGAGTTTTGTGCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHPLSPITSRVLLHRHAPPILRG*RVLCPL Trigger: CAGCGGGCACAAAACTCTTCATCCACGGAGGATTGG...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCCTCCCCCAAAGACGTATAGTTGGTTTCCGATAGCTGCGGACGATGTGCTCCAAACACCCAGATaGTGTGAGGAGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPPPKTYSWFPIAADDVLQTPR*CEESRR Trigger: CCTCCTGCTCTCCTCACAGCATCTGGGTGTTTGGAG...CACATCGTCCGCAGCTATCGGAAACCAACTATACGTCTTTGGGGGAGGAGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGAAGAGCACTGCCATCTCTCCAGTCCCCGTCTCACTCTTGAGATTCATACCATCACATGGCCATaGCGAGGAGACGGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PLEEHCHLSSPRLTLEIHTITWP*RGDGGL Trigger: AAGTCCTCCGTCTCCTCGGCATGGCCATGTGATGGT...ATGAATCTCAAGAGTGAGACGGGGACTGGAGAGATGGCAGTGCTCTTCCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR GCA 90 bp | CACCACGTAGACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGAAAGAACTTGTCCCCTaGCAATCCTCCGTGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HHVDQAGLCLPSAGIKGVKELVP*QSSVDE Trigger: TTCATCCACGGAGGATTGGCAGGGGACAAGTTCTTT...CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTCTACGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR GCA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCACAGTCACTTCTGGTGTaGTCCACGTCCTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PHPLSPITSRVLLHRHAPQSLLV*STSCLQ Trigger: CTGAAGACAGGACGTGGAGCACACCAGAAGTGACTG...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | ATACTTGCGTCAAATACATGCAACTTCACGTCCTCCACAGGCTGGGCACCTCTCAAATATGAGCAGCTGTaGCCAACTCGAGGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILASNTCNFTSSTGWAPLKYEQL*PTRGQG Trigger: GCCCTGCCCTCGAGTTGGCCACAGCTGCTCATATTT...GAGAGGTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGCAAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGAAGAGCACTGCCATCTCTCCAGTCCCCGTCTCACTCTTGAGATTCATGCTGCGGACGATGTGTaGAATGTTCTTGGGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLEEHCHLSSPRLTLEIHAADDV*NVLGDG Trigger: TCCATCCCCAAGAACATTCCACACATCGTCCGCAGC...ATGAATCTCAAGAGTGAGACGGGGACTGGAGAGATGGCAGTGCTCTTCCAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTTTGCGTCAAATACATGCAACTTCACGTCCTCCACAGGCTGGGCACCTCCTGGTGTGTTCCATGTaGCTTTCCTGGGCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ECLRQIHATSRPPQAGHLLVCSM*LSWACL Trigger: GAGACAAGCCCAGGAAAGCCACATGGAACACACCAG...GAGGTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGCAAACACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| 3UTR CAA 72 bp | AAGCAGCCCCAAGATCCCTATGTCCCCAGCCCATACTaGCGTCAAATACATGCAACTTCACGTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KQPQDPYVPSPY*RQIHATSRPPQ Trigger: CTGTGGAGGACGTGAAGTTGCATGTATTTGACGCAAGTATGGGCTGGGGACATAGGGATCTTGGGGCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| CDS-3UTR TCA 90 bp | ACGTATAGTTGGTTTCCGATAGCTGCGGACGATGTGTGGAATGTTCTTGGGGATAACACCCAGATGCTGTaGGGAGAGCAGGAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TYSWFPIAADDVWNVLGDNTQML*GEQEGR Trigger: CCTTCCCTCCTGCTCTCCTCACAGCATCTGGGTGTT...ATCCCCAAGAACATTCCACACATCGTCCGCAGCTATCGGAAACCAACTATACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS-3UTR TCA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCACCATGTGTCTCCGGTTaGGACCATGTCAGAGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLSPITSRVLLHRHAPPCVSG*DHVRVF Trigger: AAACACTCTGACATGGTCTCAACCGGAGACACATGG...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR TCA 90 bp | GACATCACTGGCCATGGGATGACACACATGGAGTGGTCCAGTCGTCCAGCGGGTCATGGTGTGTACATCTaGGAAACTTTGGTTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: DITGHGMTHMEWSSRPAGHGVYI*ETLVWI Trigger: AATCCAAACCAAAGTTTCTCAGATGTACACACCATG...ACCCGCTGGACGACTGGACCACTCCATGTGTGTCATCCCATGGCCAGTGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| CDS-3UTR TCA 90 bp | CACCACGTAGACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCATGGTGTGTACATCTaGGAAACTTTGGTTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: HHVDQAGLCLPSAGIKGVHGVYI*ETLVWI Trigger: AATCCAAACCAAAGTTTCTCAGATGTACACACCATG...CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTCTACGTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCCCCCAAAGACGTATAGTTGGTTTCCGATAGCTGCGGACGATGTGTGGACAGTTTCGATTTCCTaGCTGGTCTGCACCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPPPKTYSWFPIAADDVWTVSIS*LVCTSK Trigger: TTTGGAGGTGCAGACCAGTCAGGAAATCGAAACTGT...CCACACATCGTCCGCAGCTATCGGAAACCAACTATACGTCTTTGGGGGAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047963.7 ENSMUST00000141099.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGAAGAGCACTGCCATCTCTCCAGTCCCCGTCTCACTCTTGAGATTCATTTGGTTTCCGATAGCTaGGGACGATGTGTGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PLEEHCHLSSPRLTLEIHLVSDS*GRCVEC Trigger: ACATTCCACACATCGTCCGCAGCTATCGGAAACCAA...ATGAATCTCAAGAGTGAGACGGGGACTGGAGAGATGGCAGTGCTCTTCCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR GCA 90 bp | CACCACGTAGACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCCATGTCAGAGTGTTTaGGTCAAATACATGCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: HHVDQAGLCLPSAGIKGVPCQSV*VKYMQL Trigger: AAGTTGCATGTATTTGACGCAAACACTCTGACATGG...CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTCTACGTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGAAGAGCACTGCCATCTCTCCAGTCCCCGTCTCACTCTTGAGATTCATTTTCGATTTCCTGACTaGTCTGCACCTCCAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: PLEEHCHLSSPRLTLEIHFRFPD*SAPPNT Trigger: GGTGTTTGGAGGTGCAGACCAGTCAGGAAATCGAAA...ATGAATCTCAAGAGTGAGACGGGGACTGGAGAGATGGCAGTGCTCTTCCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCACCAAACATATATACATaGTGTCCCACAGCAACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PHPLSPITSRVLLHRHAPPNIYT*CPTATA Trigger: CGCCGTTGCTGTGGGACACCATGTATATATGTTTGG...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | GACAGTTTCGATTTCCTGACTGGTCTGCACCTCCAAACACCCAGATGCTGTGAGAGTGTACAGACCATGTaGCTTTCCTGGGCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSFDFLTGLHLQTPRCCESVQTM*LSWACL Trigger: GAGACAAGCCCAGGAAAGCCACATGGTCTGTACACT...CTCACAGCATCTGGGTGTTTGGAGGTGCAGACCAGTCAGGAAATCGAAACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| CDS-3UTR TCA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCATGTCTTCAGGACTCATaGCTTGCAGACAGTTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PHPLSPITSRVLLHRHAPCLQDS*LADSFD Trigger: ATCGAAACTGTCTGCAAGTCATGAGTCCTGAAGACA...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | TCTACATCATCTGTCTTACTCCCATTCATACTTCCTAAAAGGGGAGAGAGGAGCGTGGCCGTGTCCCACTaGTGTGTTCCCAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: STSSVLLPFILPKRGERSVAVSH*CVPKSM Trigger: CATGGACTTGGGAACACACCAGTGGGACACGGCCAC...GCTCCTCTCTCCCCTTTTAGGAAGTATGAATGGGAGTAAGACAGATGATGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CAA 72 bp | CAGGGATGGTTAATAACAAGAGCCAGTCCTCATCCTTaGTCCCCCATTACCAGCAGGGTCCTACTACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGWLITRASPHP*SPITSRVLLHR Trigger: CCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGGACTGGCTCTTGTTATTAACCATCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CAA 72 bp | CTCTCGACTGCTGGGATTATAGACACTCATCTGCCATaGCGCTTGGTCTGTGTGGTGCTAGGGACTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSTAGIIDTHLP*RLVCVVLGTKC Trigger: ACATTTAGTCCCTAGCACCACACAGACCAAGCGCAATGGCAGATGAGTGTCTATAATCCCAGCAGTCGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCATGTCACCTATATCAATGCAATGGAGATCATCAAAGAACTTGTCCCCTGTTGCTCCCCCGACAATaGAGATCTTCCCGCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCHLYQCNGDHQRTCPLLLPRQ*RSSRSR Trigger: CCGAGAGCGGGAAGATCTTCATTGTCGGGGGAGCAA...CAGGGGACAAGTTCTTTGATGATCTCCATTGCATTGATATAGGTGACATGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCCCCCAAAGACGTATAGTTGGTTTCCGATAGCTGCGGACGATGTGTGGTCAGGACTCATGACTTaGAGACAGTTTCGATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPPKTYSWFPIAADDVWSGLMT*RQFRFP Trigger: AGGAAATCGAAACTGTCTGCAAGTCATGAGTCCTGA...CCACACATCGTCCGCAGCTATCGGAAACCAACTATACGTCTTTGGGGGAGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS-3UTR GCA 90 bp | TCTACATCATCTGTCTTACTCCCATTCATACTTCCTAAAAGGGGAGAGAGGAGCGAGTTTTGTGCCCGCTaGCACCATCACATGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: STSSVLLPFILPKRGERSEFCAR*HHHMAM Trigger: CATGGCCATGTGATGGTGGCAGCGGGCACAAAACTC...GCTCCTCTCTCCCCTTTTAGGAAGTATGAATGGGAGTAAGACAGATGATGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCTATATCAATGCAATGGAGATCATCAAAGAACTTGTCCCCTGCCAATCCAAATATGAGCAGCTGTaGCCAACTCGAGGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTYINAMEIIKELVPCQSKYEQL*PTRGQG Trigger: GCCCTGCCCTCGAGTTGGCCACAGCTGCTCATATTT...GGATTGGCAGGGGACAAGTTCTTTGATGATCTCCATTGCATTGATATAGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| 3UTR CAA 72 bp | ACTGCTGGGATTATAGACACTCATCTGCCATTGCGCTaGGTCTGTGTGGTGCTAGGGACTAAATGTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TAGIIDTHLPLR*VCVVLGTKCVQ Trigger: CTGTACACATTTAGTCCCTAGCACCACACAGACCAAGCGCAATGGCAGATGAGTGTCTATAATCCCAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| CDS-3UTR CCA 90 bp | ACGTATAGTTGGTTTCCGATAGCTGCGGACGATGTGTGGAATGTTCTTGGGGATTTTCGATTTCCTGACTaGTCTGCACCTCCAAACACC | + |
|
Preference number: 4 (lower is better) Translates to: TYSWFPIAADDVWNVLGDFRFPD*SAPPNT Trigger: GGTGTTTGGAGGTGCAGACCAGTCAGGAAATCGAAA...ATCCCCAAGAACATTCCACACATCGTCCGCAGCTATCGGAAACCAACTATACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047963.7 ENSMUST00000141099.2 |
||
| CDS-3UTR CCA 90 bp | CTACTCAGATTTAGATGTCTAAGGCCAAATATGGTCAAGGACTCAAGGTTAAGAGCTGCCACCATCACATaGCCATGCCGAGGAGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLRFRCLRPNMVKDSRLRAATIT*PCRGDG Trigger: TCCGTCTCCTCGGCATGGCCATGTGATGGTGGCAGC...TCTTAACCTTGAGTCCTTGACCATATTTGGCCTTAGACATCTAAATCTGAGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | TCTACATCATCTGTCTTACTCCCATTCATACTTCCTAAAAGGGGAGAGAGGAGCTGTGGTCCTCCACTCTaGGTCTCTGCTTTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: STSSVLLPFILPKRGERSCGPPL*VSAFSA Trigger: TGCTGAGAAAGCAGAGACCCAGAGTGGAGGACCACA...GCTCCTCTCTCCCCTTTTAGGAAGTATGAATGGGAGTAAGACAGATGATGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR GCA 90 bp | TCATGTCACCTATATCAATGCAATGGAGATCATCAAAGAACTTGTCCCCTGCCACTCCAAACACCCAGATaGCAAGTCCATGGTGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SCHLYQCNGDHQRTCPLPLQTPR*QVHGVY Trigger: GTACACACCATGGACTTGGCATCTGGGTGTTTGGAG...TGGCAGGGGACAAGTTCTTTGATGATCTCCATTGCATTGATATAGGTGACATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGAAGAGCACTGCCATCTCTCCAGTCCCCGTCTCACTCTTGAGATTCATTGTCACCTATATCAATaGAATGGAGATCATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLEEHCHLSSPRLTLEIHCHLYQ*NGDHQR Trigger: TCTTTGATGATCTCCATTGCATTGATATAGGTGACA...ATGAATCTCAAGAGTGAGACGGGGACTGGAGAGATGGCAGTGCTCTTCCAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | AATATGTTTATACTGTGGTTATCATTTTCCCAAGATCAAGAAGCCAGCTTGGTGGGAGCCAGTCACTTCTaGTGTGCTCCACGTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NMFILWLSFSQDQEASLVGASHF*CAPRPV Trigger: GACAGGACGTGGAGCACACCAGAAGTGACTGGCTCC...CACCAAGCTGGCTTCTTGATCTTGGGAAAATGATAACCACAGTATAAACATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR GCA 90 bp | AATATGTTTATACTGTGGTTATCATTTTCCCAAGATCAAGAAGCCAGCTTGGTGCTCCAAACACCCAGATaGTGTGAGGAGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NMFILWLSFSQDQEASLVLQTPR*CEESRR Trigger: CCTCCTGCTCTCCTCACAGCATCTGGGTGTTTGGAG...CACCAAGCTGGCTTCTTGATCTTGGGAAAATGATAACCACAGTATAAACATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | CTACTCAGATTTAGATGTCTAAGGCCAAATATGGTCAAGGACTCAAGGTTAAGAGAATGTTCTTGGGGATaGAGGGGAGCCAGTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRFRCLRPNMVKDSRLRECSWG*RGASHF Trigger: GAAGTGACTGGCTCCCCTCCATCCCCAAGAACATTC...TCTTAACCTTGAGTCCTTGACCATATTTGGCCTTAGACATCTAAATCTGAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CAA 72 bp | AAGAGCACTGCCATCTCTCCAGTCCCCGTCTCACTCTaGAGATTCATTTTTGTACACTACCTGATACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSTAISPVPVSL*RFIFVHYLIHF Trigger: AAAGTGTATCAGGTAGTGTACAAAAATGAATCTCAAGAGTGAGACGGGGACTGGAGAGATGGCAGTGCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGTACATATTCTGTGAACACCCAGTCATTGTGATTATGAACCAAATAAGGTCAAAGTGTACCATGTaGCTTTCCTGGGCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRYIFCEHPVIVIMNQIRSKCTM*LSWACL Trigger: GAGACAAGCCCAGGAAAGCCACATGGTACACTTTGA...CCTTATTTGGTTCATAATCACAATGACTGGGTGTTCACAGAATATGTACCTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR TCA 90 bp | TCTACATCATCTGTCTTACTCCCATTCATACTTCCTAAAAGGGGAGAGAGGAGCCTTGGAGGGTTAGAATaGCAGAATCTGAGTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: STSSVLLPFILPKRGERSLGGLE*QNLSLY Trigger: ATAAAGACTCAGATTCTGTCATTCTAACCCTCCAAG...GCTCCTCTCTCCCCTTTTAGGAAGTATGAATGGGAGTAAGACAGATGATGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR GCA 90 bp | CTACTCAGATTTAGATGTCTAAGGCCAAATATGGTCAAGGACTCAAGGTTAAGATCAGGACTCATGACTTaGAGACAGTTTCGATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRFRCLRPNMVKDSRLRSGLMT*RQFRFP Trigger: AGGAAATCGAAACTGTCTGCAAGTCATGAGTCCTGA...TCTTAACCTTGAGTCCTTGACCATATTTGGCCTTAGACATCTAAATCTGAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | CTACTCAGATTTAGATGTCTAAGGCCAAATATGGTCAAGGACTCAAGGTTAAGATCCCCTTTCTCATCTTaGAGGGTTAGAATGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRFRCLRPNMVKDSRLRSPFSS*RVRMTE Trigger: TTCTGTCATTCTAACCCTCCAAGATGAGAAAGGGGA...TCTTAACCTTGAGTCCTTGACCATATTTGGCCTTAGACATCTAAATCTGAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CAA 72 bp | AAACACAAGTATTTGGGGCCAAGTGAAATGTTAAAATaGATTTGTACAACTTCATGCTGGGTCCAGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KHKYLGPSEMLK*ICTTSCWVQGW Trigger: CCATCCCTGGACCCAGCATGAAGTTGTACAAATCAATTTTAACATTTCACTTGGCCCCAAATACTTGTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CAA 72 bp | ATTTTTGTACACTACCTGATACACTTTGAACCCAGCTaGGGCTTGGTAGCTCATGCTACTTATTTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: IFVHYLIHFEPS*GLVAHATYFFT Trigger: AGTGAAGAAATAAGTAGCATGAGCTACCAAGCCCAAGCTGGGTTCAAAGTGTATCAGGTAGTGTACAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGTACATATTCTGTGAACACCCAGTCATTGTGATTATGAACCAAATAAGGCCTATATCAATGCAATaGAGATCATCAAAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRYIFCEHPVIVIMNQIRPISMQ*RSSKNL Trigger: CAAGTTCTTTGATGATCTCCATTGCATTGATATAGG...CCTTATTTGGTTCATAATCACAATGACTGGGTGTTCACAGAATATGTACCTCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| 3UTR CAA 72 bp | TTTAAAGATTTTATTTATTTGAGTCCACTGTGGGTATaGGATTCCATTACAGATGGTTGTGAGCCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FKDFIYLSPLWV*DSITDGCEPPC Trigger: ACATGGTGGCTCACAACCATCTGTAATGGAATCCAATACCCACAGTGGACTCAAATAAATAAAATCTTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS CCA 90 bp | AGGGAAGGAAGCTGGCATGCTCGTACCGAGGCAAGAGGCCCTCCCTaGTGGCCGTGTCCCACTGGTGTGTTCCATGTGGCTTTCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: REGSWHARTEARGPP*WPCPTGVFHVAFLG Trigger: GCCCAGGAAAGCCACATGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTGCCTCGGTACGAGCATGCCAGCTTCCTTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS CCA 90 bp | CAAGAGGCCCTCCCTGGTGGCCGTGTCCCACTGGTGTGTTCCATGTaGCTTTCCTGGGCTTGTCTCCAGGCTCCAAGATGGGCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QEALPGGRVPLVCSM*LSWACLQAPRWAAA Trigger: AGCAGCTGCCCATCTTGGAGCCTGGAGACAAGCCCAGGAAAGCCACATGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS CCA 90 bp | GAAGGAAGCTGGCATGCTCGTACCGAGGCAAGAGGCCCTCCCTGGTaGCCGTGTCCCACTGGTGTGTTCCATGTGGCTTTCCTGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EGSWHARTEARGPPW*PCPTGVFHVAFLGL Trigger: CAAGCCCAGGAAAGCCACATGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTGCCTCGGTACGAGCATGCCAGCTTCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS-3UTR CAA 90 bp | GCGTCAAATACATGCAACTTCACGTCCTCCACAGGCTGGGCACCTCTCTCTCCTGTGGCTTTCCTGGGCTaGTCTCCAGGCTCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ASNTCNFTSSTGWAPLSPVAFLG*SPGSKM Trigger: CATCTTGGAGCCTGGAGACAAGCCCAGGAAAGCCAC...AGGAGAGAGAGGTGCCCAGCCTGTGGAGGACGTGAAGTTGCATGTATTTGACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140663.8 ENSMUST00000141099.2 |
||
| CDS-3UTR CAA 90 bp | GCACCTCTCTCTCCTCCCCCAAAGACGTATAGTTGGTTTCCGATAGCTGCGGACGTGGCTTTCCTGGGCTaGTCTCCAGGCTCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: APLSPPPKTYSWFPIAADVAFLG*SPGSKM Trigger: CATCTTGGAGCCTGGAGACAAGCCCAGGAAAGCCAC...GTCCGCAGCTATCGGAAACCAACTATACGTCTTTGGGGGAGGAGAGAGAGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000140663.8 ENSMUST00000141099.2 |
||
| CDS-3UTR CAA 90 bp | GACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCTACTATGTGGCTTTCCTGGGCTaGTCTCCAGGCTCCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: DQAGLCLPSAGIKGVCYYVAFLG*SPGSKM Trigger: CATCTTGGAGCCTGGAGACAAGCCCAGGAAAGCCAC...ATAGTAGCACACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS CCA 90 bp | TTCTGTGTTCATCCCACCGAACACAAAGCAGAGCAACACAGTAGTTaGACTCTCCTCGTGTGGTCCTCCACTCTGGGTCTCTGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FCVHPTEHKAEQHSS*TLLVWSSTLGLCFL Trigger: GAGAAAGCAGAGACCCAGAGTGGAGGACCACACGAGGAGAGTCCAACTACTGTGTTGCTCTGCTTTGTGTTCGGTGGGATGAACACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113086.9 ENSMUST00000118108.2 ENSMUST00000145903.8 |
||
| CDS-3UTR CAA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCAAGATCATCAAAGAACTaGTCCCCTGCCAATCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PHPLSPITSRVLLHRHAPRSSKN*SPANPP Trigger: CGGAGGATTGGCAGGGGACAAGTTCTTTGATGATCT...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CAA 90 bp | CCTCATCCTTTGTCCCCCATTACCAGCAGGGTCCTACTACATAGGCATGCACCACTGAGAAACTTTGGTTaGGATTTGCTCCCCCGACAA | + |
|
Preference number: 5 (lower is better) Translates to: PHPLSPITSRVLLHRHAPLRNFG*DLLPRQ Trigger: TTGTCGGGGGAGCAAATCCAAACCAAAGTTTCTCAG...TGGTGCATGCCTATGTAGTAGGACCCTGCTGGTAATGGGGGACAAAGGATGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS-3UTR CAA 90 bp | GACCAGGCTGGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTGCTACTATTTCAGGACTCATGACTaGCAGACAGTTTCGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DQAGLCLPSAGIKGVCYYFRTHD*QTVSIS Trigger: GGAAATCGAAACTGTCTGCAAGTCATGAGTCCTGAA...ATAGTAGCACACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCCAGCCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS CCA 90 bp | CACGTCCTGTCTTCCAAGTCCATGGTGTGTACATCTGAGAAACTTTaGTTTGGATTTGCTCCCCCGACAATGAAGATCTTCCCGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HVLSSKSMVCTSEKL*FGFAPPTMKIFPLS Trigger: CGAGAGCGGGAAGATCTTCATTGTCGGGGGAGCAAATCCAAACCAAAGTTTCTCAGATGTACACACCATGGACTTGGAAGACAGGACGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113086.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGCTCCAGTGGCTGTCATACCTCCAAACATATATACATGGTGTCCCACAGCCTGAGAAACTTTGGTTaGGATTTGCTCCCCCGACAA | + |
|
Preference number: 5 (lower is better) Translates to: QCSSGCHTSKHIYMVSHSLRNFG*DLLPRQ Trigger: TTGTCGGGGGAGCAAATCCAAACCAAAGTTTCTCAG...GCTGTGGGACACCATGTATATATGTTTGGAGGTATGACAGCCACTGGAGCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047963.7 |
||
| CDS TCA 90 bp | TGGTGTGCTCCACGTCCTGTCTTCCAAGTCCATGGTGTGTACATCTaGGAAACTTTGGTTTGGATTTGCTCCCCCGACAATGAAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: WCAPRPVFQVHGVYI*ETLVWICSPDNEDL Trigger: AAGATCTTCATTGTCGGGGGAGCAAATCCAAACCAAAGTTTCTCAGATGTACACACCATGGACTTGGAAGACAGGACGTGGAGCACACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113086.9 |
||
| CDS CCA 90 bp | CCACTCTGGGTCTCTGCTTTCTCAGCAGCGTCCCCTTTCTCATCTTaGAGGGTTAGAATGACAGAATCTGAGTCTTTATTCTCAGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLWVSAFSAASPFSS*RVRMTESESLFSEV Trigger: TACCTCTGAGAATAAAGACTCAGATTCTGTCATTCTAACCCTCCAAGATGAGAAAGGGGACGCTGCTGAGAAAGCAGAGACCCAGAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113086.9 ENSMUST00000118108.2 ENSMUST00000145903.8 |
||
| CDS CCA 72 bp | AGCTGGCATGCTCGTACCGAGGCAAGAGGCCCTCCCTaGTGGCCGTGTCCCACTGGTGTGTTCCATGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SWHARTEARGPP*WPCPTGVFHVA Trigger: AGCCACATGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTGCCTCGGTACGAGCATGCCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS CCA 72 bp | TGGCATGCTCGTACCGAGGCAAGAGGCCCTCCCTGGTaGCCGTGTCCCACTGGTGTGTTCCATGTGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: WHARTEARGPPW*PCPTGVFHVAF Trigger: GAAAGCCACATGGAACACACCAGTGGGACACGGCCACCAGGGAGGGCCTCTTGCCTCGGTACGAGCATGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS CAA 90 bp | TGGTGGCCGTGTCCCACTGGTGTGTTCCATGTGGCTTTCCTGGGCTaGTCTCCAGGCTCCAAGATGGGCAGCTGCTTCATGATGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WWPCPTGVFHVAFLG*SPGSKMGSCFMMPC Trigger: GCAGGGCATCATGAAGCAGCTGCCCATCTTGGAGCCTGGAGACAAGCCCAGGAAAGCCACATGGAACACACCAGTGGGACACGGCCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS CAA 90 bp | CTGTCTCCAGGGCAAGTCAAAGTGTACCATGTGGCTTTCCTGGGCTaGTCTCCAGGCTCCAAGATGGGCAGCTGCTTCATGATGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSPGQVKVYHVAFLG*SPGSKMGSCFMMPC Trigger: GCAGGGCATCATGAAGCAGCTGCCCATCTTGGAGCCTGGAGACAAGCCCAGGAAAGCCACATGGTACACTTTGACTTGCCCTGGAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS CAA 90 bp | CTCCAGGGCAAGTCAAAGTGTACAGACCATGTGGCTTTCCTGGGCTaGTCTCCAGGCTCCAAGATGGGCAGCTGCTTCATGATGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LQGKSKCTDHVAFLG*SPGSKMGSCFMMPC Trigger: GCAGGGCATCATGAAGCAGCTGCCCATCTTGGAGCCTGGAGACAAGCCCAGGAAAGCCACATGGTCTGTACACTTTGACTTGCCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140663.8 |
||
| CDS GCA 72 bp | TGGACTCTCCTCGTGTGGTCCTCCACTCTGGGTCTCTaGTTTCTCAGCAGCGTCCCCTTTCTCATCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WTLLVWSSTLGL*FLSSVPFLILE Trigger: CTCCAAGATGAGAAAGGGGACGCTGCTGAGAAAGCAGAGACCCAGAGTGGAGGACCACACGAGGAGAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113086.9 ENSMUST00000118108.2 ENSMUST00000145903.8 |
||
| CDS CCA 72 bp | CTCCAGGGCAAGTCAAAGTGTACCATGTGGCTTTCCTaGGCTTGTCTCCAGGCTCCAAGATGGGCAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LQGKSKCTMWLS*ACLQAPRWAAA Trigger: AGCAGCTGCCCATCTTGGAGCCTGGAGACAAGCCCAGGAAAGCCACATGGTACACTTTGACTTGCCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113086.9 ENSMUST00000118108.2 ENSMUST00000145903.8 |
||
| CDS CAA 72 bp | TGTCCCACTGGTGTGTTCCATGTGGCTTTCCTGGGCTaGTCTCCAGGCTCCAAGATGGGCAGCTGCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: CPTGVFHVAFLG*SPGSKMGSCFM Trigger: CATGAAGCAGCTGCCCATCTTGGAGCCTGGAGACAAGCCCAGGAAAGCCACATGGAACACACCAGTGGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141099.2 |
||
| CDS CCA 72 bp | ACAGTAGTTGGACTCTCCTCGTGTGGTCCTCCACTCTaGGTCTCTGCTTTCTCAGCAGCGTCCCCTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TVVGLSSCGPPL*VSAFSAASPFS Trigger: TGAGAAAGGGGACGCTGCTGAGAAAGCAGAGACCCAGAGTGGAGGACCACACGAGGAGAGTCCAACTACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113086.9 ENSMUST00000118108.2 ENSMUST00000145903.8 |
||
| CDS CAA 72 bp | GGGCAAGTCAAAGTGTACCATGTGGCTTTCCTGGGCTaGTCTCCAGGCTCCAAGATGGGCAGCTGCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GQVKVYHVAFLG*SPGSKMGSCFM Trigger: CATGAAGCAGCTGCCCATCTTGGAGCCTGGAGACAAGCCCAGGAAAGCCACATGGTACACTTTGACTTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145903.8 |
||
| CDS TCA 72 bp | CTGAGAAACTTTGGTTTGGATTTGCTCCCCCGACAATaGAGATCTTCCCGCTCTCGGCATCACCAACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LRNFGLDLLPRQ*RSSRSRHHQLG Trigger: CCCCAGTTGGTGATGCCGAGAGCGGGAAGATCTTCATTGTCGGGGGAGCAAATCCAAACCAAAGTTTCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047963.7 ENSMUST00000113086.9 ENSMUST00000118108.2 ENSMUST00000145903.8 |
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