Pregenerated sensors for RABAC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003380Ensembl transcript IDs: ENSMUST00000076961.9, ENSMUST00000205871.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCGAGAACAGACAGAGATaGGACAGCCGGCCGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FISKDKSPSLGLRPQVEGENRQR*DSRPAG Trigger: TCCTGCCGGCCGGCTGTCCCATCTCTGTCTGTTCTC...GCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| 3UTR CAA 90 bp | AATTGTAACAGCTTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTaGAGGCCTCAGGTGGAAGGCTCGGAGCTGAGCAGCAAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: NCNSFISKDKSPSLG*RPQVEGSELSSKAR Trigger: CCTGGCCTTGCTGCTCAGCTCCGAGCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAAGCTGTTACAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | ACAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGAGCTGGTCCACGAAGGTaGCCCAGGGCCGGATGGTCG | + |
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Preference number: 4 (lower is better) Translates to: TDRDGTAGRQERPAGPGGAGPRR*PRAGWS Trigger: CGACCATCCGGCCCTGGGGCACCTTCGTGGACCAGC...TCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR TCA 90 bp | CAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACCCCTCCCAGGACCTCTaGGGAGATGAGGGACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QTEMGQPAGRRGRQVLEDPSQDL*GDEGLL Trigger: CAGGAGTCCCTCATCTCCTCAGAGGTCCTGGGAGGG...GTCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205871.2 |
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| CDS-3UTR CCA 90 bp | ACAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGATGGGCAGCAGGGTCGTaGCGCTCAGCCCTTCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: TDRDGTAGRQERPAGPGGWAAGS*RSALPL Trigger: AAGGGGAAGGGCTGAGCGCCACGACCCTGCTGCCCA...TCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS-3UTR CCA 90 bp | CAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACGCAGGCTCCATCTGGTaGAAGGCAGCGTGGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QTEMGQPAGRRGRQVLEDAGSIW*KAAWEP Trigger: AGGCTCCCACGCTGCCTTCCACCAGATGGAGCCTGC...GTCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | ACAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACCTTCGGCATCCTTCTaGTGGTCCTTCTGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TDRDGTAGRQERPAGPGGPSASF*WSFWAA Trigger: GGCGGCCCAGAAGGACCAGCAGAAGGATGCCGAAGG...TCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS-3UTR GCA 90 bp | CAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACCAGCCACTCTCGGCCTaGGCCGGATGGAATCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: QTEMGQPAGRRGRQVLEDQPLSA*AGWNQL Trigger: AAGCTGATTCCATCCGGCGCAGGCCGAGAGTGGCTG...GTCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | GACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACACGGTCGCGAGAAACGTTaGTGGTCCACGAAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: DRDGTAGRQERPAGPGGHGREKR*WSTKVP Trigger: GGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACC...GTGTCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CCA 90 bp | GACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACACCGCGAGAAACGTTGCTaGTCCACGAAGGTGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: DRDGTAGRQERPAGPGGHREKRC*STKVPQ Trigger: CTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCG...GTGTCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | GACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACACCAGCTCCTCGCCATCTaGAGGCTCCATCTGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: DRDGTAGRQERPAGPGGHQLLAI*RLHLVE Trigger: TTCCACCAGATGGAGCCTGCAGATGGCGAGGAGCTG...GTGTCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CCA 90 bp | GACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACACGGCATACTGATGTGCTaGGCTCACCTCCCGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: DRDGTAGRQERPAGPGGHGILMC*AHLPAK Trigger: TTTGGCCGGGAGGTGAGCCCAGCACATCAGTATGCC...GTGTCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CCA 90 bp | ACAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGATCTGCAGGCTCCATCTaGTGGAAGGCAGCGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TDRDGTAGRQERPAGPGGSAGSI*WKAAWE Trigger: CTCCCACGCTGCCTTCCACCAGATGGAGCCTGCAGA...TCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR TCA 90 bp | ACAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACCACGCAGTACAGGATaGGGCCGAGAAACACGAACA | + |
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Preference number: 4 (lower is better) Translates to: TDRDGTAGRQERPAGPGGPRSTG*GRETRT Trigger: TGTTCGTGTTTCTCGGCCTCATCCTGTACTGCGTGG...TCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR TCA 90 bp | GGTGGAAGGCTCGGAGCTGAGCAGCAAGGCCAGGTAGGACGAGAACAGACAGAGGGGAGCCAACAGGACTaGGTCCCTCCCAGGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: GGRLGAEQQGQVGREQTEGSQQD*VPPRTS Trigger: AGAGGTCCTGGGAGGGACTCAGTCCTGTTGGCTCCC...CTCTGTCTGTTCTCGTCCTACCTGGCCTTGCTGCTCAGCTCCGAGCCTTCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | ACAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGAAAAGCTCTCCCACATTaGGGGGTCGCGAGAAACGTT | + |
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Preference number: 4 (lower is better) Translates to: TDRDGTAGRQERPAGPGGKALPH*GVARNV Trigger: AACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTT...TCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | CAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACGATAATACTCCACGTTaGGTACCAGGCGCTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: QTEMGQPAGRRGRQVLEDDNTPR*VPGAGK Trigger: TTTGCCAGCGCCTGGTACGCAACGTGGAGTATTATC...GTCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | GGTGGAAGGCTCGGAGCTGAGCAGCAAGGCCAGGTAGGACGAGAACAGACAGAGCAGGGCATACTGATGTaGTGGGCTCACCTCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GGRLGAEQQGQVGREQTEQGILM*WAHLPA Trigger: GGCCGGGAGGTGAGCCCAGCACATCAGTATGCCCTG...CTCTGTCTGTTCTCGTCCTACCTGGCCTTGCTGCTCAGCTCCGAGCCTTCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | ATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCTCGGCTGGTCCACGAAGGTaGCCCAGGGCCGGATGGTCG | + |
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Preference number: 4 (lower is better) Translates to: ISKDKSPSLGLRPQVEGSAGPRR*PRAGWS Trigger: CGACCATCCGGCCCTGGGGCACCTTCGTGGACCAGC...CGAGCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CCA 90 bp | GCCTCAGGTGGAAGGCTCGGAGCTGAGCAGCAAGGCCAGGTAGGACGAGAACAGTGGTGGAAGGCAGCGTaGGAGCCTATGAGTACCAGC | + |
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Preference number: 4 (lower is better) Translates to: ASGGRLGAEQQGQVGREQWWKAA*EPMSTS Trigger: GCTGGTACTCATAGGCTCCCACGCTGCCTTCCACCA...CTGTTCTCGTCCTACCTGGCCTTGCTGCTCAGCTCCGAGCCTTCCACCTGAGGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR TCA 90 bp | TTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCTCGGACCAGCCAGGGCATACTaGTGTGCTGGGCTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: FQRQKPLPGFEASGGRLGPARAY*CAGLTS Trigger: GGAGGTGAGCCCAGCACATCAGTATGCCCTGGCTGG...TCCGAGCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | CTCGGAGCTGAGCAGCAAGGCCAGGTAGGACGAGAACAGACAGAGATGGGACAGGGTCGCGAGAAACGTTaGTGGTCCACGAAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LGAEQQGQVGREQTEMGQGREKR*WSTKVP Trigger: GGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACC...CTGTCCCATCTCTGTCTGTTCTCGTCCTACCTGGCCTTGCTGCTCAGCTCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | TTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCTCGGACAGGGCATACTGATGTaGTGGGCTCACCTCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: FQRQKPLPGFEASGGRLGQGILM*WAHLPA Trigger: GGCCGGGAGGTGAGCCCAGCACATCAGTATGCCCTG...TCCGAGCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR TCA 90 bp | ATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCTCGCAGCGTGGGAGCCTATaGGTACCAGCGTGGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: ISKDKSPSLGLRPQVEGSQRGSL*VPAWLP Trigger: TGGGAGCCACGCTGGTACTCATAGGCTCCCACGCTG...CGAGCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | CTCGGAGCTGAGCAGCAAGGCCAGGTAGGACGAGAACAGACAGAGATGGGACAGCAGCTCCTCGCCATCTaGAGGCTCCATCTGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LGAEQQGQVGREQTEMGQQLLAI*RLHLVE Trigger: TTCCACCAGATGGAGCCTGCAGATGGCGAGGAGCTG...CTGTCCCATCTCTGTCTGTTCTCGTCCTACCTGGCCTTGCTGCTCAGCTCCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CCA 90 bp | ATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCTCGTCTGCAGGCTCCATCTaGTGGAAGGCAGCGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: ISKDKSPSLGLRPQVEGSSAGSI*WKAAWE Trigger: CTCCCACGCTGCCTTCCACCAGATGGAGCCTGCAGA...CGAGCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CCA 90 bp | GCCTCAGGTGGAAGGCTCGGAGCTGAGCAGCAAGGCCAGGTAGGACGAGAACAGGGAGAGGGTAGAATCTaGACCCCAGATTCTAGCACA | + |
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Preference number: 4 (lower is better) Translates to: ASGGRLGAEQQGQVGREQGEGRI*TPDSST Trigger: TGTGCTAGAATCTGGGGTCCAGATTCTACCCTCTCC...CTGTTCTCGTCCTACCTGGCCTTGCTGCTCAGCTCCGAGCCTTCCACCTGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205871.2 |
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| CDS-3UTR TCA 90 bp | TTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCTCGGACCACGCAGTACAGGATaGGGCCGAGAAACACGAACA | + |
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Preference number: 4 (lower is better) Translates to: FQRQKPLPGFEASGGRLGPRSTG*GRETRT Trigger: TGTTCGTGTTTCTCGGCCTCATCCTGTACTGCGTGG...TCCGAGCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | ACAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGAACACGAACACGTAGTTaGTTTGATAATACTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: TDRDGTAGRQERPAGPGGTRTRS*FDNTPR Trigger: ACGTGGAGTATTATCAAAGCAACTACGTGTTCGTGT...TCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCCGGATGGAATCAGCTTaGGCAGCAGGGTCGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: FISKDKSPSLGLRPQVEGRMESA*AAGSWR Trigger: GCGCCACGACCCTGCTGCCCAAGCTGATTCCATCCG...GCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS-3UTR GCA 90 bp | TTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCCAGCCACTCTCGGCCTaGGCCGGATGGAATCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: FISKDKSPSLGLRPQVEGQPLSA*AGWNQL Trigger: AAGCTGATTCCATCCGGCGCAGGCCGAGAGTGGCTG...GCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | TTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCTCGGAGATAATACTCCACGTTaGGTACCAGGCGCTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: FQRQKPLPGFEASGGRLGDNTPR*VPGAGK Trigger: TTTGCCAGCGCCTGGTACGCAACGTGGAGTATTATC...TCCGAGCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | GCCTCAGGTGGAAGGCTCGGAGCTGAGCAGCAAGGCCAGGTAGGACGAGAACAGACACGAACACGTAGTTaGTTTGATAATACTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: ASGGRLGAEQQGQVGREQTRTRS*FDNTPR Trigger: ACGTGGAGTATTATCAAAGCAACTACGTGTTCGTGT...CTGTTCTCGTCCTACCTGGCCTTGCTGCTCAGCTCCGAGCCTTCCACCTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR GCA 90 bp | TTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCAAAGCTCTCCCACATTaGGGGGTCGCGAGAAACGTT | + |
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Preference number: 4 (lower is better) Translates to: FISKDKSPSLGLRPQVEGKALPH*GVARNV Trigger: AACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTT...GCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR TCA 90 bp | AATAGCAATTGTAACAGCTTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGCCAGCCAGGGCATACTaGTGTGCTGGGCTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: NSNCNSFISKDKSPSLGLPARAY*CAGLTS Trigger: GGAGGTGAGCCCAGCACATCAGTATGCCCTGGCTGG...CAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAAGCTGTTACAATTGCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS-3UTR CCA 90 bp | AGCAATTGTAACAGCTTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGTGGTGGAAGGCAGCGTaGGAGCCTATGAGTACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SNCNSFISKDKSPSLGLRWWKAA*EPMSTS Trigger: GCTGGTACTCATAGGCTCCCACGCTGCCTTCCACCA...CCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAAGCTGTTACAATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS-3UTR CCA 90 bp | AATAGCAATTGTAACAGCTTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGGCAGGCTCCATCTGGTaGAAGGCAGCGTGGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: NSNCNSFISKDKSPSLGLAGSIW*KAAWEP Trigger: AGGCTCCCACGCTGCCTTCCACCAGATGGAGCCTGC...CAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAAGCTGTTACAATTGCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS-3UTR CCA 90 bp | AATAGCAATTGTAACAGCTTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGGGCATACTGATGTGCTaGGCTCACCTCCCGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: NSNCNSFISKDKSPSLGLGILMC*AHLPAK Trigger: TTTGGCCGGGAGGTGAGCCCAGCACATCAGTATGCC...CAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAAGCTGTTACAATTGCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS GCA 90 bp | CCAGGGCCGGATGGTCGCCCGGCGCCGCTCCAGCCACTCTCGGCCTaGGCCGGATGGAATCAGCTTGGGCAGCAGGGTCGTGGCGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: PGPDGRPAPLQPLSA*AGWNQLGQQGRGAQ Trigger: CTGAGCGCCACGACCCTGCTGCCCAAGCTGATTCCATCCGGCGCAGGCCGAGAGTGGCTGGAGCGGCGCCGGGCGACCATCCGGCCCTGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS CCA 90 bp | GATGGTCGCCCGGCGCCGCTCCAGCCACTCTCGGCCTGCGCCGGATaGAATCAGCTTGGGCAGCAGGGTCGTGGCGCTCAGCCCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: DGRPAPLQPLSACAG*NQLGQQGRGAQPFP Trigger: GGGGAAGGGCTGAGCGCCACGACCCTGCTGCCCAAGCTGATTCCATCCGGCGCAGGCCGAGAGTGGCTGGAGCGGCGCCGGGCGACCATC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS CCA 90 bp | GTCGCGAGAAACGTTGCTGGTCCACGAAGGTGCCCCAGGGCCGGATaGTCGCCCGGCGCCGCTCCAGCCACTCTCGGCCTGCGCCGGATG | + |
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Preference number: 5 (lower is better) Translates to: VARNVAGPRRCPRAG*SPGAAPATLGLRRM Trigger: CATCCGGCGCAGGCCGAGAGTGGCTGGAGCGGCGCCGGGCGACCATCCGGCCCTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 90 bp | CCAGGGCCGGATGGTCGCCCGGCGCCGCTCCAGCCACTCTCGGCCTaGGCCGGATGGAATCAGCTTGGGCAGCAGGGTCCTAATGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PGPDGRPAPLQPLSA*AGWNQLGQQGPNGQ Trigger: CTGCCCATTAGGACCCTGCTGCCCAAGCTGATTCCATCCGGCGCAGGCCGAGAGTGGCTGGAGCGGCGCCGGGCGACCATCCGGCCCTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205871.2 |
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| CDS GCA 90 bp | CTCCCACATTGCGGGGTCGCGAGAAACGTTGCTGGTCCACGAAGGTaGCCCAGGGCCGGATGGTCGCCCGGCGCCGCTCCAGCCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: LPHCGVARNVAGPRR*PRAGWSPGAAPATL Trigger: GAGAGTGGCTGGAGCGGCGCCGGGCGACCATCCGGCCCTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS CCA 90 bp | CGCTGGCAAAGCTCTCCCACATTGCGGGGTCGCGAGAAACGTTGCTaGTCCACGAAGGTGCCCCAGGGCCGGATGGTCGCCCGGCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: RWQSSPTLRGREKRC*STKVPQGRMVARRR Trigger: GCGGCGCCGGGCGACCATCCGGCCCTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTTGCCAGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 90 bp | AGGCGCTGGCAAAGCTCTCCCACATTGCGGGGTCGCGAGAAACGTTaGTGGTCCACGAAGGTGCCCCAGGGCCGGATGGTCGCCCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: RRWQSSPTLRGREKR*WSTKVPQGRMVARR Trigger: GCGCCGGGCGACCATCCGGCCCTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTTGCCAGCGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CAA 90 bp | CAGACAGAGATGGGACAGCCGGCCGGCAGGAGAGGCCGGCAGGTCCTGGAGGACGGGTCGCGAGAAACGTaGCTGGTCCACGAAGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: QTEMGQPAGRRGRQVLEDGSRET*LVHEGA Trigger: GGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCC...GTCCTCCAGGACCTGCCGGCCTCTCCTGCCGGCCGGCTGTCCCATCTCTGTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 90 bp | AATACTCCACGTTGCGTACCAGGCGCTGGCAAAGCTCTCCCACATTaGGGGGTCGCGAGAAACGTTGCTGGTCCACGAAGGTGCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NTPRCVPGAGKALPH*GVARNVAGPRRCPR Trigger: CCTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTTGCCAGCGCCTGGTACGCAACGTGGAGTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CAA 90 bp | CTCGGAGCTGAGCAGCAAGGCCAGGTAGGACGAGAACAGACAGAGATGGGACAGGGGTCGCGAGAAACGTaGCTGGTCCACGAAGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LGAEQQGQVGREQTEMGQGSRET*LVHEGA Trigger: GGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCC...CTGTCCCATCTCTGTCTGTTCTCGTCCTACCTGGCCTTGCTGCTCAGCTCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS TCA 90 bp | GCCAGCCAGAAGAAGGGGAAAGAGACGCCACCAGCCAGGGCATACTaGTGTGCTGGGCTCACCTCCCGGCCAAAGAGTACAAGCTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: ASQKKGKETPPARAY*CAGLTSRPKSTSLD Trigger: GTCTAAGCTTGTACTCTTTGGCCGGGAGGTGAGCCCAGCACATCAGTATGCCCTGGCTGGTGGCGTCTCTTTCCCCTTCTTCTGGCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 90 bp | GGCCGAGAAACACGAACACGTAGTTGCTTTGATAATACTCCACGTTaGGTACCAGGCGCTGGCAAAGCTCTCCCACATTGCGGGGTCGCG | + |
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Preference number: 5 (lower is better) Translates to: GRETRTRSCFDNTPR*VPGAGKALPHCGVA Trigger: CGCGACCCCGCAATGTGGGAGAGCTTTGCCAGCGCCTGGTACGCAACGTGGAGTATTATCAAAGCAACTACGTGTTCGTGTTTCTCGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 90 bp | CCAGAAGAAGGGGAAAGAGACGCCACCAGCCAGGGCATACTGATGTaGTGGGCTCACCTCCCGGCCAAAGAGTACAAGCTTAGACTGCAA | + |
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Preference number: 5 (lower is better) Translates to: PEEGERDATSQGILM*WAHLPAKEYKLRLQ Trigger: TTGCAGTCTAAGCTTGTACTCTTTGGCCGGGAGGTGAGCCCAGCACATCAGTATGCCCTGGCTGGTGGCGTCTCTTTCCCCTTCTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS CCA 90 bp | GAAGAAGGGGAAAGAGACGCCACCAGCCAGGGCATACTGATGTGCTaGGCTCACCTCCCGGCCAAAGAGTACAAGCTTAGACTGCAACGT | + |
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Preference number: 5 (lower is better) Translates to: EEGERDATSQGILMC*AHLPAKEYKLRLQR Trigger: ACGTTGCAGTCTAAGCTTGTACTCTTTGGCCGGGAGGTGAGCCCAGCACATCAGTATGCCCTGGCTGGTGGCGTCTCTTTCCCCTTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCCCGGATGGAATCAGCTaGGGCAGCAGGGTCCTAATG | + |
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Preference number: 5 (lower is better) Translates to: FISKDKSPSLGLRPQVEGPDGIS*GSRVLM Trigger: CATTAGGACCCTGCTGCCCAAGCTGATTCCATCCGG...GCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205871.2 |
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| CDS-3UTR CAA 90 bp | AGCAATTGTAACAGCTTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCGGATGGAATCAGCTaGGGCAGCAGGGTCGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: SNCNSFISKDKSPSLGLRPDGIS*GSRVVA Trigger: CGCCACGACCCTGCTGCCCAAGCTGATTCCATCCGG...CCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAAGCTGTTACAATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS-3UTR CAA 90 bp | CTCGGAGCTGAGCAGCAAGGCCAGGTAGGACGAGAACAGACAGAGATGGGACAGGAACACGTAGTTGCTTaGATAATACTCCACGTTGCG | + |
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Preference number: 5 (lower is better) Translates to: LGAEQQGQVGREQTEMGQEHVVA*IILHVA Trigger: CGCAACGTGGAGTATTATCAAAGCAACTACGTGTTC...CTGTCCCATCTCTGTCTGTTCTCGTCCTACCTGGCCTTGCTGCTCAGCTCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTCCAAAGACAAAAGCCCCTCCCTGGGTTTGAGGCCTCAGGTGGAAGGCGAACACGTAGTTGCTTaGATAATACTCCACGTTGCG | + |
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Preference number: 5 (lower is better) Translates to: FISKDKSPSLGLRPQVEGEHVVA*IILHVA Trigger: CGCAACGTGGAGTATTATCAAAGCAACTACGTGTTC...GCCTTCCACCTGAGGCCTCAAACCCAGGGAGGGGCTTTTGTCTTTGGAAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 72 bp | TGCGGGGTCGCGAGAAACGTTGCTGGTCCACGAAGGTaGCCCAGGGCCGGATGGTCGCCCGGCGCCGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CGVARNVAGPRR*PRAGWSPGAAP Trigger: TGGAGCGGCGCCGGGCGACCATCCGGCCCTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS CCA 72 bp | AACGTTGCTGGTCCACGAAGGTGCCCCAGGGCCGGATaGTCGCCCGGCGCCGCTCCAGCCACTCTCGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: NVAGPRRCPRAG*SPGAAPATLGL Trigger: CAGGCCGAGAGTGGCTGGAGCGGCGCCGGGCGACCATCCGGCCCTGGGGCACCTTCGTGGACCAGCAACGTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 72 bp | GATGGTCGCCCGGCGCCGCTCCAGCCACTCTCGGCCTaGGCCGGATGGAATCAGCTTGGGCAGCAGGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: DGRPAPLQPLSA*AGWNQLGQQGR Trigger: ACGACCCTGCTGCCCAAGCTGATTCCATCCGGCGCAGGCCGAGAGTGGCTGGAGCGGCGCCGGGCGACCATC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS GCA 72 bp | GATGGTCGCCCGGCGCCGCTCCAGCCACTCTCGGCCTaGGCCGGATGGAATCAGCTTGGGCAGCAGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: DGRPAPLQPLSA*AGWNQLGQQGP Trigger: AGGACCCTGCTGCCCAAGCTGATTCCATCCGGCGCAGGCCGAGAGTGGCTGGAGCGGCGCCGGGCGACCATC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205871.2 |
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| CDS CAA 90 bp | CAGGCGCTGGCAAAGCTCTCCCACATTGCGGGGTCGCGAGAAACGTaGCTGGTCCACGAAGGTGCCCCAGGGCCGGATGGTCGCCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: QALAKLSHIAGSRET*LVHEGAPGPDGRPA Trigger: CGCCGGGCGACCATCCGGCCCTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTTGCCAGCGCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS CCA 72 bp | CCAGCCACTCTCGGCCTGCGCCGGATGGAATCAGCTTaGGCAGCAGGGTCGTGGCGCTCAGCCCTTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: PATLGLRRMESA*AAGSWRSALPL Trigger: AAGGGGAAGGGCTGAGCGCCACGACCCTGCTGCCCAAGCTGATTCCATCCGGCGCAGGCCGAGAGTGGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS CAA 72 bp | TCCAGCCACTCTCGGCCTGCGCCGGATGGAATCAGCTaGGGCAGCAGGGTCGTGGCGCTCAGCCCTTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SSHSRPAPDGIS*GSRVVALSPSP Trigger: AGGGGAAGGGCTGAGCGCCACGACCCTGCTGCCCAAGCTGATTCCATCCGGCGCAGGCCGAGAGTGGCTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076961.9 |
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| CDS CCA 72 bp | AGCTCTCCCACATTGCGGGGTCGCGAGAAACGTTGCTaGTCCACGAAGGTGCCCCAGGGCCGGATGGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: SSPTLRGREKRC*STKVPQGRMVA Trigger: GGCGACCATCCGGCCCTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 72 bp | CAAAGCTCTCCCACATTGCGGGGTCGCGAGAAACGTTaGTGGTCCACGAAGGTGCCCCAGGGCCGGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: QSSPTLRGREKR*WSTKVPQGRMV Trigger: GACCATCCGGCCCTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS CCA 72 bp | TCGCCATCTGCAGGCTCCATCTGGTGGAAGGCAGCGTaGGAGCCTATGAGTACCAGCGTGGCTCCCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: SPSAGSIWWKAA*EPMSTSVAPRT Trigger: GGTCCTGGGAGCCACGCTGGTACTCATAGGCTCCCACGCTGCCTTCCACCAGATGGAGCCTGCAGATGGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS CAA 72 bp | GCAAAGCTCTCCCACATTGCGGGGTCGCGAGAAACGTaGCTGGTCCACGAAGGTGCCCCAGGGCCGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: AKLSHIAGSRET*LVHEGAPGPDG Trigger: ACCATCCGGCCCTGGGGCACCTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 72 bp | CGTTGCGTACCAGGCGCTGGCAAAGCTCTCCCACATTaGGGGGTCGCGAGAAACGTTGCTGGTCCACGAAGG | + |
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Preference number: 6 (lower is better) Translates to: RCVPGAGKALPH*GVARNVAGPRR Trigger: CCTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTTGCCAGCGCCTGGTACGCAACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS CAA 72 bp | ACGTTGCGTACCAGGCGCTGGCAAAGCTCTCCCACATaGCGGGGTCGCGAGAAACGTTGCTGGTCCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: TLRTRRWQSSPT*RGREKRCWSTK Trigger: CTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTTGCCAGCGCCTGGTACGCAACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 72 bp | GGGGAAAGAGACGCCACCAGCCAGGGCATACTGATGTaGTGGGCTCACCTCCCGGCCAAAGAGTACAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GERDATSQGILM*WAHLPAKEYKL Trigger: AAGCTTGTACTCTTTGGCCGGGAGGTGAGCCCAGCACATCAGTATGCCCTGGCTGGTGGCGTCTCTTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS TCA 72 bp | AAGAAGGGGAAAGAGACGCCACCAGCCAGGGCATACTaGTGTGCTGGGCTCACCTCCCGGCCAAAGAGTACA | + |
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Preference number: 6 (lower is better) Translates to: KKGKETPPARAY*CAGLTSRPKST Trigger: TGTACTCTTTGGCCGGGAGGTGAGCCCAGCACATCAGTATGCCCTGGCTGGTGGCGTCTCTTTCCCCTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS CCA 72 bp | GAAAGAGACGCCACCAGCCAGGGCATACTGATGTGCTaGGCTCACCTCCCGGCCAAAGAGTACAAGCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: ERDATSQGILMC*AHLPAKEYKLR Trigger: TCTAAGCTTGTACTCTTTGGCCGGGAGGTGAGCCCAGCACATCAGTATGCCCTGGCTGGTGGCGTCTCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS CAA 90 bp | CACGCAGTACAGGATGAGGCCGAGAAACACGAACACGTAGTTGCTTaGATAATACTCCACGTTGCGTACCAGGCGCTGGCAAAGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: HAVQDEAEKHEHVVA*IILHVAYQALAKLS Trigger: GGAGAGCTTTGCCAGCGCCTGGTACGCAACGTGGAGTATTATCAAAGCAACTACGTGTTCGTGTTTCTCGGCCTCATCCTGTACTGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS TCA 72 bp | CCAGCAGCATGGGAGATGTCACCACGCAGTACAGGATaGGGCCGAGAAACACGAACACGTAGTTGCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: PAAWEMSPRSTG*GRETRTRSCFD Trigger: ATCAAAGCAACTACGTGTTCGTGTTTCTCGGCCTCATCCTGTACTGCGTGGTGACATCTCCCATGCTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS CAA 72 bp | CAGGATGAGGCCGAGAAACACGAACACGTAGTTGCTTaGATAATACTCCACGTTGCGTACCAGGCGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: QDEAEKHEHVVA*IILHVAYQALA Trigger: TGCCAGCGCCTGGTACGCAACGTGGAGTATTATCAAAGCAACTACGTGTTCGTGTTTCTCGGCCTCATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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| CDS GCA 72 bp | ACACGAACACGTAGTTGCTTTGATAATACTCCACGTTaGGTACCAGGCGCTGGCAAAGCTCTCCCACATTGC | + |
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Preference number: 6 (lower is better) Translates to: TRTRSCFDNTPR*VPGAGKALPHC Trigger: GCAATGTGGGAGAGCTTTGCCAGCGCCTGGTACGCAACGTGGAGTATTATCAAAGCAACTACGTGTTCGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076961.9 ENSMUST00000205871.2 |
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