Pregenerated sensors for RAB7B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052688Ensembl transcript IDs: ENSMUST00000064664.10, ENSMUST00000064679.9, ENSMUST00000129905.2, ENSMUST00000136247.8
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCTCTTGGGTGCCAGAGGCCGGTGTGGGACTGCAAGCAGAGCCTaGGAAGCTGTCTGTGGCCGAGGGATAGACAGCCCAACCACCAGG | + |
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Preference number: 1 (lower is better) Translates to: LLLGARGRCGTASRA*EAVCGRGIDSPTTR Trigger: CCTGGTGGTTGGGCTGTCTATCCCTCGGCCACAGACAGCTTCTCAGGCTCTGCTTGCAGTCCCACACCGGCCTCTGGCACCCAAGAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR TCA 90 bp | CTCCCCAGCACTGCTCTGGAGCAGGGGGAGGGAGACGAGGGTAAGTaGAAGCCACAGAAGTCCTCATCTGTGGCTCTCCTGTCCCAGTCG | + |
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Preference number: 1 (lower is better) Translates to: LPSTALEQGEGDEGK*KPQKSSSVALLSQS Trigger: CGACTGGGACAGGAGAGCCACAGATGAGGACTTCTGTGGCTTTCACTTACCCTCGTCTCCCTCCCCCTGCTCCAGAGCAGTGCTGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR GCA 90 bp | AGTGCACACAAGGCTGCTCTTGGGTGCCAGAGGCCGGTGTGGGACTaGAAGCAGAGCCTGAGAAGCTGTCTGTGGCCGAGGGATAGACAG | + |
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Preference number: 1 (lower is better) Translates to: SAHKAALGCQRPVWD*KQSLRSCLWPRDRQ Trigger: CTGTCTATCCCTCGGCCACAGACAGCTTCTCAGGCTCTGCTTGCAGTCCCACACCGGCCTCTGGCACCCAAGAGCAGCCTTGTGTGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR CCA 90 bp | GGTGACTCATGGTTGGGCTACAGTGGCTCGCAGGGACCCTTACTGTaGGTCTGGTTGTCAGCTCAGCTCACTCTGCCCTGGGGATTGGTC | + |
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Preference number: 1 (lower is better) Translates to: GDSWLGYSGSQGPLL*VWLSAQLTLPWGLV Trigger: GACCAATCCCCAGGGCAGAGTGAGCTGAGCTGACAACCAGACCCACAGTAAGGGTCCCTGCGAGCCACTGTAGCCCAACCATGAGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR TCA 90 bp | CAGGCTACAGTGTGTCCAGCAGGGTCGGGCCAGAGCTCTGTTGTTTaGGCTGAAAGCTCACTGCTTTCTCAGGACCACGTCACGGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: QATVCPAGSGQSSVV*AESSLLSQDHVTGR Trigger: CCTCCCCGTGACGTGGTCCTGAGAAAGCAGTGAGCTTTCAGCTCAAACAACAGAGCTCTGGCCCGACCCTGCTGGACACACTGTAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR CCA 90 bp | TCATGGTTGGGCTACAGTGGCTCGCAGGGACCCTTACTGTGGGTCTaGTTGTCAGCTCAGCTCACTCTGCCCTGGGGATTGGTCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: SWLGYSGSQGPLLWV*LSAQLTLPWGLVST Trigger: TGTGCTGACCAATCCCCAGGGCAGAGTGAGCTGAGCTGACAACCAGACCCACAGTAAGGGTCCCTGCGAGCCACTGTAGCCCAACCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR TCA 90 bp | TTGCCTGTGACATTCTTTCCTGCTGCAGTGCCCCAGCCTCCTAGCTaGGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LPVTFFPAAVPQPPS*VPAGGIALGMAAQL Trigger: CAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAGCTAGGAGGCTGGGGCACTGCAGCAGGAAAGAATGTCACAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
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| 3UTR TCA 90 bp | TCTGTGGCTCTCCTGTCCCAGTCGAGCTGCTGCTGTTGGTCACTGTaGTGTGCACAGAGAGAGTGCACACAAGGCTGCTCTTGGGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: SVALLSQSSCCCWSL*CAQRECTQGCSWVP Trigger: TGGCACCCAAGAGCAGCCTTGTGTGCACTCTCTCTGTGCACATCACAGTGACCAACAGCAGCAGCTCGACTGGGACAGGAGAGCCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR CCA 90 bp | CTTAGATGTCGCTGTGGTGGGGTGAAGTTCCTGTGCCTGCTGGCATaGATGCTAAGGGCCAGTCTCCAACTCAGGGTGACTCATGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: LRCRCGGVKFLCLLA*MLRASLQLRVTHGW Trigger: CCAACCATGAGTCACCCTGAGTTGGAGACTGGCCCTTAGCATCCATGCCAGCAGGCACAGGAACTTCACCCCACCACAGCGACATCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR CCA 90 bp | GGGAGGGAGACGAGGGTAAGTGAAAGCCACAGAAGTCCTCATCTGTaGCTCTCCTGTCCCAGTCGAGCTGCTGCTGTTGGTCACTGTGAT | + |
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Preference number: 1 (lower is better) Translates to: GRETRVSESHRSPHL*LSCPSRAAAVGHCD Trigger: ATCACAGTGACCAACAGCAGCAGCTCGACTGGGACAGGAGAGCCACAGATGAGGACTTCTGTGGCTTTCACTTACCCTCGTCTCCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR TCA 90 bp | GGAATCAGACCTGCATCTCCATCCAAACCTGTCGGTCCGTGGTGCTaGAGGGAGCAGTTTGTCTGCAGAGATGAGCAGGACGGTGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: GIRPASPSKPVGPWC*REQFVCRDEQDGVE Trigger: CTCAACACCGTCCTGCTCATCTCTGCAGACAAACTGCTCCCTTCAGCACCACGGACCGACAGGTTTGGATGGAGATGCAGGTCTGATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR GCA 90 bp | GCTGTTGTCTGTCTTGCTCATGTCTGCTGGCCCTCTCTCTCCAGGTaGGCTTCTGGGAGTGAAGGACTCATGTCTGCTTTGTGTGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: AVVCLAHVCWPSLSR*ASGSEGLMSALCVW Trigger: CCAGACACACAAAGCAGACATGAGTCCTTCACTCCCAGAAGCGCACCTGGAGAGAGAGGGCCAGCAGACATGAGCAAGACAGACAACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR TCA 90 bp | GGATATGGGGAAGCCTTGGGAACTCTCATTTGGCAGAGGGCGCACTaGGGCCTGGTCAGTTATGGGAGCTGTTTGAGCACCCAGGAAATA | + |
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Preference number: 1 (lower is better) Translates to: GYGEALGTLIWQRAH*GLVSYGSCLSTQEI Trigger: TATTTCCTGGGTGCTCAAACAGCTCCCATAACTGACCAGGCCTCAGTGCGCCCTCTGCCAAATGAGAGTTCCCAAGGCTTCCCCATATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR CCA 90 bp | CCTGCAGCTGCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTaGCCCCTTTGTCTAAAACAGTACCTTGTTGCTGTTGTCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: PAAASPTVTVTGKPS*PLCLKQYLVAVVCL Trigger: AAGACAGACAACAGCAACAAGGTACTGTTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCAGCTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR GCA 90 bp | TGTCTAAAACAGTACCTTGTTGCTGTTGTCTGTCTTGCTCATGTCTaGTGGCCCTCTCTCTCCAGGTGCGCTTCTGGGAGTGAAGGACTC | + |
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Preference number: 1 (lower is better) Translates to: CLKQYLVAVVCLAHV*WPSLSRCASGSEGL Trigger: GAGTCCTTCACTCCCAGAAGCGCACCTGGAGAGAGAGGGCCAGCAGACATGAGCAAGACAGACAACAGCAACAAGGTACTGTTTTAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR TCA 90 bp | CAAAGGAGTGAGCCTGTGTGTCCACACCAGCACGTGGGATTTAAATaGAGATTATGGTTCTCAGTCGCCCTAGGATATGGGGAAGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: QRSEPVCPHQHVGFK*RLWFSVALGYGEAL Trigger: CAAGGCTTCCCCATATCCTAGGGCGACTGAGAACCATAATCTTCATTTAAATCCCACGTGCTGGTGTGGACACACAGGCTCACTCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR TCA 90 bp | GGTTCAACATTCCTACAGCCTGGAAACAAGCTTCAGCCATTTTCTTaGCACAAACACCAGCTTTTCAAGTGTTCCCAGAACTCCTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: GSTFLQPGNKLQPFS*HKHQLFKCSQNSSA Trigger: GGCTGAGGAGTTCTGGGAACACTTGAAAAGCTGGTGTTTGTGTCAAGAAAATGGCTGAAGCTTGTTTCCAGGCTGTAGGAATGTTGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR TCA 90 bp | ATCCCGCCCCCAGGTGCTATGTTTCCTCCTAGTCACACAAGCGTATaGCAGAGTATAATGAATAAATTAGGTACAGCAAGAGATGGACAA | + |
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Preference number: 1 (lower is better) Translates to: IPPPGAMFPPSHTSV*QSIMNKLGTARDGQ Trigger: TTGTCCATCTCTTGCTGTACCTAATTTATTCATTATACTCTGTCATACGCTTGTGTGACTAGGAGGAAACATAGCACCTGGGGGCGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR TCA 90 bp | TTATTTATTTCTGGGATTTGCTATTTAATATTTTTGGTCCACAGTTaGCCATGGGTAACTGAGACTGGTATCACTGACCAAGAGGGACTA | + |
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Preference number: 1 (lower is better) Translates to: LFISGICYLIFLVHS*PWVTETGITDQEGL Trigger: TAGTCCCTCTTGGTCAGTGATACCAGTCTCAGTTACCCATGGTCAACTGTGGACCAAAAATATTAAATAGCAAATCCCAGAAATAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR CAA 90 bp | CAGTGCCCCAGCCTCCTAGCTGAGTACCGGCTGGTGGGATTGCACTaGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: QCPSLLAEYRLVGLH*EWLHSCHRESGGRP Trigger: CGGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAGCTAGGAGGCTGGGGCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
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| 3UTR CAA 90 bp | CTGCTGCAGTGCCCCAGCCTCCTAGCTGAGTACCGGCTGGTGGGATaGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LLQCPSLLAEYRLVG*HLEWLHSCHRESGG Trigger: CCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAGCTAGGAGGCTGGGGCACTGCAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTGCTCCCTCTCCTGGCATGTTCTGGCAGAGGGCGCACTaGGGCCTGGTCAGTTATGGG | + |
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Preference number: 2 (lower is better) Translates to: LCPLPQSLGLAAPSPGMFWQRAH*GLVSYG Trigger: CCCATAACTGACCAGGCCTCAGTGCGCCCTCTGCCA...GAACATGCCAGGAGAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCTGCAGCTGCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTGGCCTCATGGAGACGCCCGTaGTTTCTCTGGGGCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SSCSCQPNGHRHRKALLASWRRP*FLWGQD Trigger: ATCCTGGCCCCAGAGAAATCACGGGCGTCTCCATGA...GGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCAGCTGCAGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGTGGCCGAGGGATAGACAGCCCAACCACCAGGCAGCAGTAGAAAAGCTCTGGCAGAGGGCGCACTaGGGCCTGGTCAGTTATGGG | + |
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Preference number: 2 (lower is better) Translates to: CLWPRDRQPNHQAAVEKLWQRAH*GLVSYG Trigger: CCCATAACTGACCAGGCCTCAGTGCGCCCTCTGCCA...GAGCTTTTCTACTGCTGCCTGGTGGTTGGGCTGTCTATCCCTCGGCCACAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR CAA 90 bp | TGGTTGGGCTACAGTGGCTCGCAGGGACCCTTACTGTGGGTCTGGTaGTCAGCTCAGCTCACTCTGCCCTGGGGATTGGTCAGCACATCT | + |
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Preference number: 2 (lower is better) Translates to: WLGYSGSQGPLLWVW*SAQLTLPWGLVSTS Trigger: AGATGTGCTGACCAATCCCCAGGGCAGAGTGAGCTGAGCTGACAACCAGACCCACAGTAAGGGTCCCTGCGAGCCACTGTAGCCCAACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGAATGCAGCACTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTGCTCCCTCTCTTTCCTGCTGCAGTaGCCCAGCCTCCTAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: MECSTLPIASEPWPSCSLSFLLQ*PSLLAE Trigger: CTCAGCTAGGAGGCTGGGGCACTGCAGCAGGAAAGA...GAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR GCA 90 bp | GGAATGGAATGCAGCACTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTGCTCCAGGCCTGTAGGCTTCTaGCTGTCAGGAGCGGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: GMECSTLPIASEPWPSCSRPVGF*LSGAVH Trigger: ATGGACCGCTCCTGACAGGCAGAAGCCTACAGGCCT...GGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCATTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCTGCAGCTGCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTGGCCTGGTGGGATTGCACTTaGAATGGCTGCACAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SSCSCQPNGHRHRKALLAWWDCT*NGCTAV Trigger: GACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCA...GGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCAGCTGCAGGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR GCA 90 bp | GGAATGGAATGCAGCACTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTGCTCCTGTCTTGCTCATGTCTaGTGGCCCTCTCTCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GMECSTLPIASEPWPSCSCLAHV*WPSLSR Trigger: CCTGGAGAGAGAGGGCCAGCAGACATGAGCAAGACA...GGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR CAA 90 bp | GCAGAGATGAGCAGGACGGTGTTGAGGCAGAGGAGAAAGAGGAGCTaGAGTCATGGAGACGCCCGTGATTTCTCTGGGGCCAGGATTTGC | + |
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Preference number: 2 (lower is better) Translates to: AEMSRTVLRQRRKRS*SHGDARDFSGARIC Trigger: GCAAATCCTGGCCCCAGAGAAATCACGGGCGTCTCCATGACTCAAGCTCCTCTTTCTCCTCTGCCTCAACACCGTCCTGCTCATCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR CAA 90 bp | GGTGCTGAAGGGAGCAGTTTGTCTGCAGAGATGAGCAGGACGGTGTaGAGGCAGAGGAGAAAGAGGAGCTTGAGTCATGGAGACGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: GAEGSSLSAEMSRTV*RQRRKRSLSHGDAR Trigger: ACGGGCGTCTCCATGACTCAAGCTCCTCTTTCTCCTCTGCCTCAACACCGTCCTGCTCATCTCTGCAGACAAACTGCTCCCTTCAGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTGGCCCCTTTGTCTAAAATCCCTCAGCTCTCCCTaGAAGAAGCTGTGGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: ASPTVTVTGKPSWPLCLKSLSSP*KKLWEV Trigger: GACTTCCCACAGCTTCTTTCAGGGAGAGCTGAGGGA...TTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR TCA 90 bp | GGAATGGAATGCAGCACTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTGCTCCGTGCGCTTCTGGGAGTaGAGGACTCATGTCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GMECSTLPIASEPWPSCSVRFWE*RTHVCF Trigger: AAAGCAGACATGAGTCCTTCACTCCCAGAAGCGCAC...GGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR CAA 90 bp | GTTCTCAGTCGCCCTAGGATATGGGGAAGCCTTGGGAACTCTCATTaGGCAGAGGGCGCACTGAGGCCTGGTCAGTTATGGGAGCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: VLSRPRIWGSLGNSH*AEGALRPGQLWELF Trigger: AAACAGCTCCCATAACTGACCAGGCCTCAGTGCGCCCTCTGCCAAATGAGAGTTCCCAAGGCTTCCCCATATCCTAGGGCGACTGAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTGGCCCCTTTGTCTAAAAGCCAGGATTTGCCTGTaGCATTCTTTCCTGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ASPTVTVTGKPSWPLCLKARICL*HSFLLQ Trigger: CTGCAGCAGGAAAGAATGTCACAGGCAAATCCTGGC...TTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCCCTAGTGGCCAGTCATCAAATGATCAAAGTACCTTCTGGGGACAGGATGTCGGTCCGTGGTGCTaGAGGGAGCAGTTTGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LPPSGQSSNDQSTFWGQDVGPWC*REQFVC Trigger: GCAGACAAACTGCTCCCTTCAGCACCACGGACCGAC...ATCCTGTCCCCAGAAGGTACTTTGATCATTTGATGACTGGCCACTAGGGGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTGTGGTGAGCCCGATCAATAGAATCCTGTTGACTGGGGTCTTTTTCTTGGTCGCTGTGGTGGGGTaGAGTTCCTGTGCCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: EAVVSPINRILLTGVFFLVAVVG*SSCACW Trigger: CCAGCAGGCACAGGAACTTCACCCCACCACAGCGAC...CAAGAAAAAGACCCCAGTCAACAGGATTCTATTGATCGGGCTCACCACAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCTCCACTTGAGCGAGGCTGTGGTGAGCCCGATCAATAGAATCCTGTTGACTAGGCCTGTAGGCTTCTaGCTGTCAGGAGCGGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: VLHLSEAVVSPINRILLTRPVGF*LSGAVH Trigger: ATGGACCGCTCCTGACAGGCAGAAGCCTACAGGCCT...AGTCAACAGGATTCTATTGATCGGGCTCACCACAGCCTCGCTCAAGTGGAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCGAATGCACACCTCCCCACACACATCCCTCCACAGTCTGACTTCAGGAGAGAGGCCTGGTCAGTTATaGGAGCTGTTTGAGCACCCA | + |
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Preference number: 2 (lower is better) Translates to: CRMHTSPHTSLHSLTSGERPGQL*ELFEHP Trigger: TGGGTGCTCAAACAGCTCCCATAACTGACCAGGCCT...CTCTCCTGAAGTCAGACTGTGGAGGGATGTGTGTGGGGAGGTGTGCATTCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTGCTCCCTCTCCTGGCATGTTCGATATGGGGAAGCCTTaGGAACTCTCATTTGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LCPLPQSLGLAAPSPGMFDMGKP*ELSFGR Trigger: TCTGCCAAATGAGAGTTCCCAAGGCTTCCCCATATC...GAACATGCCAGGAGAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR CCA 90 bp | TACTCATCCCAGAGCTACCTGTGTCTAACCAACAGCTCCCCAGCACTGCTCTGGACTATGAAGAGGGCCTaGGATATGTTGCCACCGCGC | + |
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Preference number: 2 (lower is better) Translates to: YSSQSYLCLTNSSPALLWTMKRA*DMLPPR Trigger: GCGCGGTGGCAACATATCCCAGGCCCTCTTCATAGT...CCAGAGCAGTGCTGGGGAGCTGTTGGTTAGACACAGGTAGCTCTGGGATGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR CAA 90 bp | TCCTGCAGCTGCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTaGGCCCCTTTGTCTAAAACAGTACCTTGTTGCTGTTGTCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SCSCQPNGHRHRKAL*APLSKTVPCCCCLS Trigger: AGACAGACAACAGCAACAAGGTACTGTTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCAGCTGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR GCA 90 bp | CATCTCCATCCAAACCTGTCGGTCCGTGGTGCTGAAGGGAGCAGTTTGTCTGCATGCACTTGGAATGGCTaGACAGCTGTCATCGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: HLHPNLSVRGAEGSSLSACTWNG*TAVIGS Trigger: ACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCA...TGCAGACAAACTGCTCCCTTCAGCACCACGGACCGACAGGTTTGGATGGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCTCCACTTGAGCGAGGCTGTGGTGAGCCCGATCAATAGAATCCTGTTGACTTGGTGGGATTGCACTTaGAATGGCTGCACAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: VLHLSEAVVSPINRILLTWWDCT*NGCTAV Trigger: GACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCA...AGTCAACAGGATTCTATTGATCGGGCTCACCACAGCCTCGCTCAAGTGGAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
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| 3UTR-3UTR TCA 90 bp | TACTCATCCCAGAGCTACCTGTGTCTAACCAACAGCTCCCCAGCACTGCTCTGGTGTGACAACATGAGATaGTGGCGTATCTCAGTGATG | + |
|
Preference number: 2 (lower is better) Translates to: YSSQSYLCLTNSSPALLWCDNMR*WRISVM Trigger: CATCACTGAGATACGCCATCATCTCATGTTGTCACA...CCAGAGCAGTGCTGGGGAGCTGTTGGTTAGACACAGGTAGCTCTGGGATGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTCCACTTGAGCGAGGCTGTGGTGAGCCCGATCAATAGAATCCTGTTGACTCCTCATGTGACAACATaGGATGATGGCGTATCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLHLSEAVVSPINRILLTPHVTT*DDGVSQ Trigger: CTGAGATACGCCATCATCTCATGTTGTCACATGAGG...AGTCAACAGGATTCTATTGATCGGGCTCACCACAGCCTCGCTCAAGTGGAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCTGGATTAGATGCACAGAATAGAGCAAAGGCAACTGACCTGGGTAGGATGCTGAGTACCGGCTGGTaGGATTGCACTTGGAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: TAGLDAQNRAKATDLGRMLSTGW*DCTWNG Trigger: GCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAG...CATCCTACCCAGGTCAGTTGCCTTTGCTCTATTCTGTGCATCTAATCCAGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR-3UTR TCA 90 bp | TACCTCGCTCTGGGATCTGTCTCTGATTTCGATTTGTTGCCTGAATCAAGACATTCATGGAGACGCCCGTaGTTTCTCTGGGGCCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: YLALGSVSDFDLLPESRHSWRRP*FLWGQD Trigger: ATCCTGGCCCCAGAGAAATCACGGGCGTCTCCATGA...ATGTCTTGATTCAGGCAACAAATCGAAATCAGAGACAGATCCCAGAGCGAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTACAGCCTGGAAACAAGCTTCAGCCATTTTCTTGACACAAACACCAGCTTTTGGGCGCACTGAGGCCTaGTCAGTTATGGGAGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: PTAWKQASAIFLTQTPAFGRTEA*SVMGAV Trigger: AACAGCTCCCATAACTGACCAGGCCTCAGTGCGCCC...AAAAGCTGGTGTTTGTGTCAAGAAAATGGCTGAAGCTTGTTTCCAGGCTGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGCTCCACTTGAGCGAGGCTGTGGTGAGCCCGATCAATAGAATCCTGTTGACTAGAATCTATGTCATGTaGTTTAAGGCTGTGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VLHLSEAVVSPINRILLTRIYVM*FKAVAE Trigger: CTCTGCCACAGCCTTAAAGCACATGACATAGATTCT...AGTCAACAGGATTCTATTGATCGGGCTCACCACAGCCTCGCTCAAGTGGAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | GGTGCCAGAGGCCGGTGTGGGACTGCAAGCAGAGCCTaGGAAGCTGTCTGTGGCCGAGGGATAGACAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GARGRCGTASRA*EAVCGRGIDSP Trigger: TGGGCTGTCTATCCCTCGGCCACAGACAGCTTCTCAGGCTCTGCTTGCAGTCCCACACCGGCCTCTGGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | AAGGCTGCTCTTGGGTGCCAGAGGCCGGTGTGGGACTaGAAGCAGAGCCTGAGAAGCTGTCTGTGGCCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KAALGCQRPVWD*KQSLRSCLWPR Trigger: CCTCGGCCACAGACAGCTTCTCAGGCTCTGCTTGCAGTCCCACACCGGCCTCTGGCACCCAAGAGCAGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | CTGAGTACCGGCTGGTGGGATTGCACTTGGAATGGCTaGACAGCTGTCATCGGGAGTCCGGAGGGAGGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LSTGWWDCTWNG*TAVIGSPEGGR Trigger: TCGGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| 3UTR CCA 72 bp | GCACACAAGGCTGCTCTTGGGTGCCAGAGGCCGGTGTaGGACTGCAAGCAGAGCCTGAGAAGCTGTCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: AHKAALGCQRPV*DCKQSLRSCLW Trigger: CCACAGACAGCTTCTCAGGCTCTGCTTGCAGTCCCACACCGGCCTCTGGCACCCAAGAGCAGCCTTGTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | CTAGCTGAGTACCGGCTGGTGGGATTGCACTTGGAATaGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LAEYRLVGLHLE*LHSCHRESGGR Trigger: CCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAGCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| 3UTR CCA 72 bp | GTGTGGGACTGCAAGCAGAGCCTGAGAAGCTGTCTGTaGCCGAGGGATAGACAGCCCAACCACCAGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VWDCKQSLRSCL*PRDRQPNHQAA Trigger: TGCTGCCTGGTGGTTGGGCTGTCTATCCCTCGGCCACAGACAGCTTCTCAGGCTCTGCTTGCAGTCCCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | CTAAGGGCCAGTCTCCAACTCAGGGTGACTCATGGTTaGGCTACAGTGGCTCGCAGGGACCCTTACTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRASLQLRVTHG*ATVARRDPYCG Trigger: CCCACAGTAAGGGTCCCTGCGAGCCACTGTAGCCCAACCATGAGTCACCCTGAGTTGGAGACTGGCCCTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | CGCTGTGGTGGGGTGAAGTTCCTGTGCCTGCTGGCATaGATGCTAAGGGCCAGTCTCCAACTCAGGGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: RCGGVKFLCLLA*MLRASLQLRVT Trigger: AGTCACCCTGAGTTGGAGACTGGCCCTTAGCATCCATGCCAGCAGGCACAGGAACTTCACCCCACCACAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGAATGCAGCACTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTGCTCCCTCTGCTGAAGGGAGCAGTTaGTCTGCAGAGATGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WNAALCPLPQSLGLAAPSAEGSS*SAEMSR Trigger: CCTGCTCATCTCTGCAGACAAACTGCTCCCTTCAGC...AGAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | TCCAGCAGGGTCGGGCCAGAGCTCTGTTGTTTGAGCTaGAAGCTCACTGCTTTCTCAGGACCACGTCACGGG | + |
|
Preference number: 3 (lower is better) Translates to: SSRVGPELCCLS*KLTAFSGPRHG Trigger: CCCGTGACGTGGTCCTGAGAAAGCAGTGAGCTTTCAGCTCAAACAACAGAGCTCTGGCCCGACCCTGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | ACTGCTCTGGAGCAGGGGGAGGGAGACGAGGGTAAGTaGAAGCCACAGAAGTCCTCATCTGTGGCTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TALEQGEGDEGK*KPQKSSSVALL Trigger: CAGGAGAGCCACAGATGAGGACTTCTGTGGCTTTCACTTACCCTCGTCTCCCTCCCCCTGCTCCAGAGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | CGGGCCAGAGCTCTGTTGTTTGAGCTGAAAGCTCACTaGTTTCTCAGGACCACGTCACGGGGAGGTGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RARALLFELKAH*FLRTTSRGGES Trigger: GGACTCACCTCCCCGTGACGTGGTCCTGAGAAAGCAGTGAGCTTTCAGCTCAAACAACAGAGCTCTGGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | GATGCTAAGGGCCAGTCTCCAACTCAGGGTGACTCATaGTTGGGCTACAGTGGCTCGCAGGGACCCTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: DAKGQSPTQGDS*LGYSGSQGPLL Trigger: CAGTAAGGGTCCCTGCGAGCCACTGTAGCCCAACCATGAGTCACCCTGAGTTGGAGACTGGCCCTTAGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAATGCAGCACTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTGCTCCCTCGGATATGGGGAAGCCTaGGGAACTCTCATTTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MECSTLPIASEPWPSCSLGYGEA*GTLIWQ Trigger: CTGCCAAATGAGAGTTCCCAAGGCTTCCCCATATCC...GAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | ACATTCTTTCCTGCTGCAGTGCCCCAGCCTCCTAGCTaGGTACCGGCTGGTGGGATTGCACTTGGAATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TFFPAAVPQPPS*VPAGGIALGMA Trigger: AGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAGCTAGGAGGCTGGGGCACTGCAGCAGGAAAGAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| 3UTR TCA 72 bp | GAAGCCTTGGGAACTCTCATTTGGCAGAGGGCGCACTaGGGCCTGGTCAGTTATGGGAGCTGTTTGAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: EALGTLIWQRAH*GLVSYGSCLST Trigger: GGTGCTCAAACAGCTCCCATAACTGACCAGGCCTCAGTGCGCCCTCTGCCAAATGAGAGTTCCCAAGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | GTGTGTCCAGCAGGGTCGGGCCAGAGCTCTGTTGTTTaGGCTGAAAGCTCACTGCTTTCTCAGGACCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: VCPAGSGQSSVV*AESSLLSQDHV Trigger: GACGTGGTCCTGAGAAAGCAGTGAGCTTTCAGCTCAAACAACAGAGCTCTGGCCCGACCCTGCTGGACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | AGCACTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTaGTCCCTCTCCTGGCATGTTCTTCCTGTAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: STLPIASEPWPS*SLSWHVLPVAL Trigger: AAGAGCTACAGGAAGAACATGCCAGGAGAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | ATGGAATGCAGCACTCTGCCCATTGCCTCAGAGCCTTaGCCTAGCTGCTCCCTCTCCTGGCATGTTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: MECSTLPIASEP*PSCSLSWHVLP Trigger: AGGAAGAACATGCCAGGAGAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCCTGCAGCTGCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTGGCCAGTACCTTGTTGCTGTaGTCTGTCTTGCTCATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSCSCQPNGHRHRKALLASTLLL*SVLLMS Trigger: AGACATGAGCAAGACAGACAACAGCAACAAGGTACT...GGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCAGCTGCAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | AAAGAAGCTGTGGGAAGTCTCAGGCCTGTAGGCTTCTaGCTGTCAGGAGCGGTCCATGTTCTGACTGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KEAVGSLRPVGF*LSGAVHVLTAE Trigger: CTCAGCAGTCAGAACATGGACCGCTCCTGACAGGCAGAAGCCTACAGGCCTGAGACTTCCCACAGCTTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | CAGTACCTTGTTGCTGTTGTCTGTCTTGCTCATGTCTaGTGGCCCTCTCTCTCCAGGTGCGCTTCTGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: QYLVAVVCLAHV*WPSLSRCASGS Trigger: ACTCCCAGAAGCGCACCTGGAGAGAGAGGGCCAGCAGACATGAGCAAGACAGACAACAGCAACAAGGTACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | CAACTTAGATGTCGCTGTGGTGGGGTGAAGTTCCTGTaGCTGCTGGCATGGATGCTAAGGGCCAGTCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QLRCRCGGVKFL*LLAWMLRASLQ Trigger: TTGGAGACTGGCCCTTAGCATCCATGCCAGCAGGCACAGGAACTTCACCCCACCACAGCGACATCTAAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | TCCATCCCCTACTGTCCGCCAGTCTGTAAAGCTGAGTaGGGTGAATCAAAACACGCCCACCCTAGCAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: SIPYCPPVCKAE*GESKHAHPSNW Trigger: CCAGTTGCTAGGGTGGGCGTGTTTTGATTCACCGCACTCAGCTTTACAGACTGGCGGACAGTAGGGGATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | ACGAGGGTAAGTGAAAGCCACAGAAGTCCTCATCTGTaGCTCTCCTGTCCCAGTCGAGCTGCTGCTGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TRVSESHRSPHL*LSCPSRAAAVG Trigger: ACCAACAGCAGCAGCTCGACTGGGACAGGAGAGCCACAGATGAGGACTTCTGTGGCTTTCACTTACCCTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | GAGTGCGGTGAATCAAAACACGCCCACCCTAGCAACTaGGAGCCTGAGGCCGAAGAATACCAAGTTCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ECGESKHAHPSN*EPEAEEYQVQG Trigger: GCCTTGAACTTGGTATTCTTCGGCCTCAGGCTCCCAGTTGCTAGGGTGGGCGTGTTTTGATTCACCGCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCCATCCAAACCTGTCGGTCCGTGGTGCTGAAGGGAGCAGTTTGTCTGCACTCTGGGGCCAGGATTaGCCTGTGACATTCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HLHPNLSVRGAEGSSLSALWGQD*PVTFFP Trigger: AGGAAAGAATGTCACAGGCAAATCCTGGCCCCAGAG...TGCAGACAAACTGCTCCCTTCAGCACCACGGACCGACAGGTTTGGATGGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | CAAACGGCAGCAGAAATGGGCATTTTCCCAAGTCCCTaGGGGCAGGGCCTAACGTCCAAGCCTGCTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QTAAEMGIFPSP*GQGLTSKPALF Trigger: AAACAAAGCAGGCTTGGACGTTAGGCCCTGCCCTCAGGGACTTGGGAAAATGCCCATTTCTGCTGCCGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | TCTGAGATAGCAGCTTTGAGTCCTCAGGGAATGGAATaGAGCACTCTGCCCATTGCCTCAGAGCCTTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SEIAALSPQGME*STLPIASEPWP Trigger: AGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCATTCCCTGAGGACTCAAAGCTGCTATCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | CATTTGGCAGAGGGCGCACTGAGGCCTGGTCAGTTATaGGAGCTGTTTGAGCACCCAGGAAATAGGTACAAC | + |
|
Preference number: 3 (lower is better) Translates to: HLAEGALRPGQL*ELFEHPGNRYN Trigger: GTTGTACCTATTTCCTGGGTGCTCAAACAGCTCCCATAACTGACCAGGCCTCAGTGCGCCCTCTGCCAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | TACCTTGTTGCTGTTGTCTGTCTTGCTCATGTCTGCTaGCCCTCTCTCTCCAGGTGCGCTTCTGGGAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: YLVAVVCLAHVC*PSLSRCASGSE Trigger: TTCACTCCCAGAAGCGCACCTGGAGAGAGAGGGCCAGCAGACATGAGCAAGACAGACAACAGCAACAAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | GCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTaGCCCCTTTGTCTAAAACAGTACCTTGTTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASPTVTVTGKPS*PLCLKQYLVAV Trigger: AACAGCAACAAGGTACTGTTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGAATGCACACCTCCCCACACACATCCCTCCACAGTCTGACTTCAGGAGAGTCTGAGATAGCAGCTTaGAGTCCTCAGGGAATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CRMHTSPHTSLHSLTSGESEIAA*SPQGME Trigger: TTCCATTCCCTGAGGACTCAAAGCTGCTATCTCAGA...CTCTCCTGAAGTCAGACTGTGGAGGGATGTGTGTGGGGAGGTGTGCATTCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCCCCTAGTGGCCAGTCATCAAATGATCAAAGTACCTTCTGGGGACAGGATCACAGGAAAGCCCTCTaGGCCCCTTTGTCTAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LPPSGQSSNDQSTFWGQDHRKAL*APLSKT Trigger: TGTTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTG...ATCCTGTCCCCAGAAGGTACTTTGATCATTTGATGACTGGCCACTAGGGGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | CCCCAGTTATTACCCCCTGACTGGCTTCCTAGAGATTaGCACCTCGGATCTGCTTGGAACTCAGGAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PQLLPPDWLPRD*HLGSAWNSGKK Trigger: CTTCTTTCCTGAGTTCCAAGCAGATCCGAGGTGTCAATCTCTAGGAAGCCAGTCAGGGGGTAATAACTGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | TGGTCAGCACATCTCCCAGTTGTAATAGGATATCTGTaGGTCTCCAGGCCCACAGGTCCCTGCTTCCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: WSAHLPVVIGYL*VSRPTGPCFHL Trigger: CAAATGGAAGCAGGGACCTGTGGGCCTGGAGACTCACAGATATCCTATTACAACTGGGAGATGTGCTGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | GAGGACACAGAATCTATGTCATGTGCTTTAAGGCTGTaGCAGAGCCTTCCCTTCAGGCTACAGTGTGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EDTESMSCALRL*QSLPFRLQCVQ Trigger: CTGGACACACTGTAGCCTGAAGGGAAGGCTCTGCCACAGCCTTAAAGCACATGACATAGATTCTGTGTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CCA 72 bp | TCTGGTTGTCAGCTCAGCTCACTCTGCCCTGGGGATTaGTCAGCACATCTCCCAGTTGTAATAGGATATCTG | + |
|
Preference number: 3 (lower is better) Translates to: SGCQLSSLCPGD*SAHLPVVIGYL Trigger: CAGATATCCTATTACAACTGGGAGATGTGCTGACCAATCCCCAGGGCAGAGTGAGCTGAGCTGACAACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR-3UTR CAA 90 bp | TACCTCGCTCTGGGATCTGTCTCTGATTTCGATTTGTTGCCTGAATCAAGACATTACCGGCTGGTGGGATaGCACTTGGAATGGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: YLALGSVSDFDLLPESRHYRLVG*HLEWLH Trigger: GTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTA...ATGTCTTGATTCAGGCAACAAATCGAAATCAGAGACAGATCCCAGAGCGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | GAGCCTGTGTGTCCACACCAGCACGTGGGATTTAAATaGAGATTATGGTTCTCAGTCGCCCTAGGATATGGG | + |
|
Preference number: 3 (lower is better) Translates to: EPVCPHQHVGFK*RLWFSVALGYG Trigger: CCCATATCCTAGGGCGACTGAGAACCATAATCTTCATTTAAATCCCACGTGCTGGTGTGGACACACAGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGCCCAGGTTCAACATTCCTACAGCCTGGAAACAAGCTTCAGCCATTTTCTCTCTGGGGCCAGGATTaGCCTGTGACATTCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TSPGSTFLQPGNKLQPFSLWGQD*PVTFFP Trigger: AGGAAAGAATGTCACAGGCAAATCCTGGCCCCAGAG...AGAAAATGGCTGAAGCTTGTTTCCAGGCTGTAGGAATGTTGAACCTGGGCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | AGACTTCTGTGGAGACAGGAATGTCTGTGGAAGGCATaGGGTATGAACCTGACCATTGAAGACCCTGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RLLWRQECLWKA*GMNLTIEDPES Trigger: ACTTTCAGGGTCTTCAATGGTCAGGTTCATACCTCATGCCTTCCACAGACATTCCTGTCTCCACAGAAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | TGGGAGCCTGAGGCCGAAGAATACCAAGTTCAAGGCTaGGCATCAATAACTACAACAAAAGACAAACCTATC | + |
|
Preference number: 3 (lower is better) Translates to: WEPEAEEYQVQG*ASITTTKDKPI Trigger: GATAGGTTTGTCTTTTGTTGTAGTTATTGATGCGCAGCCTTGAACTTGGTATTCTTCGGCCTCAGGCTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | GGCGCAGCGGTTCACCACACTCCTTCAAATGACACGTaGATTGAAAGTTGTAAGTTATTTATTTCTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: GAAVHHTPSNDT*IESCKLFISGI Trigger: AATCCCAGAAATAAATAACTTACAACTTTCAATGCACGTGTCATTTGAAGGAGTGTGGTGAACCGCTGCGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR GCA 72 bp | TCAGGAGGGTTCACCTCCAATGTCGGATGCTGTTATTaGTGTCTTGAAGTCTTAATTTTTGAACAATCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SGGFTSNVGCCY*CLEVLIFEQSH Trigger: GTGAGATTGTTCAAAAATTAAGACTTCAAGACAGCAATAACAGCATCCGACATTGGAGGTGAACCCTCCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | TCTGGGATTTGCTATTTAATATTTTTGGTCCACAGTTaGCCATGGGTAACTGAGACTGGTATCACTGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SGICYLIFLVHS*PWVTETGITDQ Trigger: TTGGTCAGTGATACCAGTCTCAGTTACCCATGGTCAACTGTGGACCAAAAATATTAAATAGCAAATCCCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR TCA 72 bp | CCAGGTGCTATGTTTCCTCCTAGTCACACAAGCGTATaGCAGAGTATAATGAATAAATTAGGTACAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PGAMFPPSHTSV*QSIMNKLGTAR Trigger: TCTTGCTGTACCTAATTTATTCATTATACTCTGTCATACGCTTGTGTGACTAGGAGGAAACATAGCACCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | TGCCCCAGCCTCCTAGCTGAGTACCGGCTGGTGGGATaGCACTTGGAATGGCTGCACAGCTGTCATCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPSLLAEYRLVG*HLEWLHSCHRE Trigger: CTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAGCTAGGAGGCTGGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| 3UTR CAA 72 bp | TACAGTGGCTCGCAGGGACCCTTACTGTGGGTCTGGTaGTCAGCTCAGCTCACTCTGCCCTGGGGATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YSGSQGPLLWVW*SAQLTLPWGLV Trigger: GACCAATCCCCAGGGCAGAGTGAGCTGAGCTGACAACCAGACCCACAGTAAGGGTCCCTGCGAGCCACTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | GCTAAGGGCCAGTCTCCAACTCAGGGTGACTCATGGTaGGGCTACAGTGGCTCGCAGGGACCCTTACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKGQSPTQGDSW*GYSGSQGPLLW Trigger: CCACAGTAAGGGTCCCTGCGAGCCACTGTAGCCCAACCATGAGTCACCCTGAGTTGGAGACTGGCCCTTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS-3UTR CCA 90 bp | GGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGGCCTGCTGGCCCCCAGTGTaGTCTGGTATTCCTCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GIALGMAAQLSSGVRREACWPPV*SGIPRK Trigger: TTTTCGAGGAATACCAGACCACACTGGGGGCCAGCA...GGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CCA 90 bp | ACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGTTTTGGAGAGGATGCTaGCCCCCAGTGTGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGWWDCTWNGCTAVIGSPFWRGC*PPVWSG Trigger: ACCAGACCACACTGGGGGCCAGCATCCTCTCCAAAA...CGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CCA 90 bp | TTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGGCCGAGAGCTCTTTGGCTGGCCTaGAGAGAGCTTGATGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHLEWLHSCHRESGGRPRALWLA*RELDGV Trigger: GACTCCATCAAGCTCTCTCCAGGCCAGCCAAAGAGC...TCTCGGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CCA 90 bp | GCACTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTGCTCCCTCTCCTGGCATGCATCTGCTCTTTGGCTaGCCTGGAGAGAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALCPLPQSLGLAAPSPGMHLLFG*PGESLM Trigger: CATCAAGCTCTCTCCAGGCCAGCCAAAGAGCAGATG...CATGCCAGGAGAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CCA 90 bp | GGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGGCCGCATCTGCTCTTTGGCTaGCCTGGAGAGAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLHLEWLHSCHRESGGRPHLLFG*PGESLM Trigger: CATCAAGCTCTCTCCAGGCCAGCCAAAGAGCAGATG...CGGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGTTTTGGAGAGGATGCTaGCCCCCAGTGTGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSTGWWDCTWNGCTAVIGFWRGC*PPVWSG Trigger: ACCAGACCACACTGGGGGCCAGCATCCTCTCCAAAA...CCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CCA 90 bp | ATGGAATGCAGCACTCTGCCCATTGCCTCAGAGCCTTGGCCTAGCTGCTCCCTCGCTCTTTGGCTGGCCTaGAGAGAGCTTGATGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MECSTLPIASEPWPSCSLALWLA*RELDGV Trigger: GACTCCATCAAGCTCTCTCCAGGCCAGCCAAAGAGC...GAGGGAGCAGCTAGGCCAAGGCTCTGAGGCAATGGGCAGAGTGCTGCATTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGGCTCTTTGGCTGGCCTaGAGAGAGCTTGATGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTGWWDCTWNGCTAVIGALWLA*RELDGV Trigger: GACTCCATCAAGCTCTCTCCAGGCCAGCCAAAGAGC...CCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGCAGCATCTGCTCTTTaGCTGGCCTGGAGAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WWDCTWNGCTAVIGSPEGAASAL*LAWREL Trigger: AAGCTCTCTCCAGGCCAGCCAAAGAGCAGATGCTGC...TCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| 3UTR CAA 72 bp | CCAAACCTGTCGGTCCGTGGTGCTGAAGGGAGCAGTTaGTCTGCAGAGATGAGCAGGACGGTGTTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PNLSVRGAEGSS*SAEMSRTVLRQ Trigger: CTGCCTCAACACCGTCCTGCTCATCTCTGCAGACAAACTGCTCCCTTCAGCACCACGGACCGACAGGTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | CGCCCTAGGATATGGGGAAGCCTTGGGAACTCTCATTaGGCAGAGGGCGCACTGAGGCCTGGTCAGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RPRIWGSLGNSH*AEGALRPGQLW Trigger: CCATAACTGACCAGGCCTCAGTGCGCCCTCTGCCAAATGAGAGTTCCCAAGGCTTCCCCATATCCTAGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CCA 90 bp | AGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTGCAGCATCTGCTCTTTaGCTGGCCTGGAGAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: STGWWDCTWNGCTAVIGSAASAL*LAWREL Trigger: AAGCTCTCTCCAGGCCAGCCAAAGAGCAGATGCTGC...ACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGGCCGAGGGATAGACAGCCCAACCACCAGGCAGCAGTAGAAAAGCTCTGCTGGCCCCCAGTGTaGTCTGGTATTCCTCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLWPRDRQPNHQAAVEKLCWPPV*SGIPRK Trigger: TTTTCGAGGAATACCAGACCACACTGGGGGCCAGCA...GAGCTTTTCTACTGCTGCCTGGTGGTTGGGCTGTCTATCCCTCGGCCACAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | CTACAGTGTGTCCAGCAGGGTCGGGCCAGAGCTCTGTaGTTTGAGCTGAAAGCTCACTGCTTTCTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LQCVQQGRARAL*FELKAHCFLRT Trigger: GGTCCTGAGAAAGCAGTGAGCTTTCAGCTCAAACAACAGAGCTCTGGCCCGACCCTGCTGGACACACTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGCCCCCAGTGTGGTCTaGTATTCCTCGAAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: AEYRLVGLHLEWLHSCHRAPSVV*YSSKNV Trigger: AACATTTTTCGAGGAATACCAGACCACACTGGGGGC...CCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CCA 90 bp | GGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGGCCGGGCTTCAAAGGACTCTaGATCAGTAACATCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLHLEWLHSCHRESGGRPGFKGL*ISNIKC Trigger: GCATTTGATGTTACTGATCCAGAGTCCTTTGAAGCC...CGGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | TGCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTaGGCCCCTTTGTCTAAAACAGTACCTTGTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CQPNGHRHRKAL*APLSKTVPCCC Trigger: ACAGCAACAAGGTACTGTTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR TCA 90 bp | ATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGGCCGAGTTGTGTACATATTGGTaGAGAAGAGAGGTCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IALGMAAQLSSGVRREAELCTYW*RREVFP Trigger: GGGAAAGACCTCTCTTCTTCACCAATATGTACACAA...CTCGGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCTTCCTGCAGCTGCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTGTTGTGTACATATTGGTaGAGAAGAGAGGTCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSCSCQPNGHRHRKALLLCTYW*RREVFP Trigger: GGGAAAGACCTCTCTTCTTCACCAATATGTACACAA...CAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCAGCTGCAGGAAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCAGTTTGTCTGCAGAGATGAGCAGGACGGTGTTGAGGCAGAGGAGAAATATGAGGTGGTTCTCTaGGGTGCCCTGGTACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: REQFVCRDEQDGVEAEEKYEVVL*GALVPQ Trigger: TTGAGGTACCAGGGCACCGCAGAGAACCACCTCATA...TTTCTCCTCTGCCTCAACACCGTCCTGCTCATCTCTGCAGACAAACTGCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS-3UTR CCA 90 bp | AGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTGCCCCCAGTGTGGTCTaGTATTCCTCGAAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: STGWWDCTWNGCTAVIGSAPSVV*YSSKNV Trigger: AACATTTTTCGAGGAATACCAGACCACACTGGGGGC...ACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR GCA 90 bp | GCTGAGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGATCAGTAACATCAAATaGCAGGATACAGCCATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AEYRLVGLHLEWLHSCHRISNIK*QDTAIG Trigger: TCCGATGGCTGTATCCTGGCATTTGATGTTACTGAT...CCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTGGCCCCTTTGTCTAAAACAGGCCCCCAGTGTGGTCTaGTATTCCTCGAAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPTVTVTGKPSWPLCLKQAPSVV*YSSKNV Trigger: AACATTTTTCGAGGAATACCAGACCACACTGGGGGC...CTGTTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGTGGTGAGCCCGATCAATAGAATCCTGTTGACTGGGGTCTTTTTCTTGGCAGCATCTGCTCTTTaGCTGGCCTGGAGAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EAVVSPINRILLTGVFFLAASAL*LAWREL Trigger: AAGCTCTCTCCAGGCCAGCCAAAGAGCAGATGCTGC...CAAGAAAAAGACCCCAGTCAACAGGATTCTATTGATCGGGCTCACCACAGCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS-3UTR TCA 90 bp | AGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTTTGTGTACATATTGGTaGAGAAGAGAGGTCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: STGWWDCTWNGCTAVIGSLCTYW*RREVFP Trigger: GGGAAAGACCTCTCTTCTTCACCAATATGTACACAA...ACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGCACCCAGGAAATAGGTACAACTGTTTTTATCTTGCTCCCTCAGCTCTCCCCATGGACCACCTCCTaGGACACCTTCCTATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTQEIGTTVFILLPQLSPWTTS*DTFLSS Trigger: GGAAGATAGGAAGGTGTCCCAGGAGGTGGTCCATGG...GGAGAGCTGAGGGAGCAAGATAAAAACAGTTGTACCTATTTCCTGGGTGCTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | AACGGTCACCGTCACAGGAAAGCCCTCTTGGCCCCTTaGTCTAAAACAGTACCTTGTTGCTGTTGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGHRHRKALLAP*SKTVPCCCCLS Trigger: AGACAGACAACAGCAACAAGGTACTGTTTTAGACAAAGGGGCCAAGAGGGCTTTCCTGTGACGGTGACCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGCACCCAGGAAATAGGTACAACTGTTTTTATCTTGCTCCCTCAGCTCTCCTATGAGGTGGTTCTCTaGGGTGCCCTGGTACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSTQEIGTTVFILLPQLSYEVVL*GALVLP Trigger: AGGAAGTACCAGGGCACCGCAGAGAACCACCTCATA...GGAGAGCTGAGGGAGCAAGATAAAAACAGTTGTACCTATTTCCTGGGTGCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064664.10 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCCTAGTGGCCAGTCATCAAATGATCAAAGTACCTTCTGGGGACAGGATATCAGTAACATCAAATaGCAGGATACAGCCATCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGQSSNDQSTFWGQDISNIK*QDTAIG Trigger: TCCGATGGCTGTATCCTGGCATTTGATGTTACTGAT...ATCCTGTCCCCAGAAGGTACTTTGATCATTTGATGACTGGCCACTAGGGGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CCA 90 bp | TACCTCGCTCTGGGATCTGTCTCTGATTTCGATTTGTTGCCTGAATCAAGACATCATCTGCTCTTTGGCTaGCCTGGAGAGAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: YLALGSVSDFDLLPESRHHLLFG*PGESLM Trigger: CATCAAGCTCTCTCCAGGCCAGCCAAAGAGCAGATG...ATGTCTTGATTCAGGCAACAAATCGAAATCAGAGACAGATCCCAGAGCGAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | TTGAGCACCCAGGAAATAGGTACAACTGTTTTTATCTaGCTCCCTCAGCTCTCCCTGAAAGAAGCTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTQEIGTTVFI*LPQLSLKEAVG Trigger: TCCCACAGCTTCTTTCAGGGAGAGCTGAGGGAGCAAGATAAAAACAGTTGTACCTATTTCCTGGGTGCTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGGATTAGATGCACAGAATAGAGCAAAGGCAACTGACCTGGGTAGGATGGGCTTCAAAGGACTCTaGATCAGTAACATCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TAGLDAQNRAKATDLGRMGFKGL*ISNIKC Trigger: GCATTTGATGTTACTGATCCAGAGTCCTTTGAAGCC...CATCCTACCCAGGTCAGTTGCCTTTGCTCTATTCTGTGCATCTAATCCAGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | ATTCCTACAGCCTGGAAACAAGCTTCAGCCATTTTCTaGACACAAACACCAGCTTTTCAAGTGTTCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPTAWKQASAIF*TQTPAFQVFPE Trigger: TTCTGGGAACACTTGAAAAGCTGGTGTTTGTGTCAAGAAAATGGCTGAAGCTTGTTTCCAGGCTGTAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | CAGCGGTTCACCACACTCCTTCAAATGACACGTGCATaGAAAGTTGTAAGTTATTTATTTCTGGGATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRFTTLLQMTRA*KVVSYLFLGFA Trigger: AGCAAATCCCAGAAATAAATAACTTACAACTTTCAATGCACGTGTCATTTGAAGGAGTGTGGTGAACCGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | GTAACTGAGACTGGTATCACTGACCAAGAGGGACTATaGTCCCATAAAGGATATAAACAATGGAAACACATA | + |
|
Preference number: 4 (lower is better) Translates to: VTETGITDQEGL*SHKGYKQWKHI Trigger: TATGTGTTTCCATTGTTTATATCCTTTATGGGACAATAGTCCCTCTTGGTCAGTGATACCAGTCTCAGTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| 3UTR CAA 72 bp | CCCATAAAGGATATAAACAATGGAAACACATACTATTaGCTGCGTACCCTTAGATATGGTCCTTATGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PIKDINNGNTYY*LRTLRYGPYVH Trigger: ATGAACATAAGGACCATATCTAAGGGTACGCAGCAAATAGTATGTGTTTCCATTGTTTATATCCTTTATGGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS GCA 90 bp | TGGCTGGCCTGGAGAGAGCTTGATGGAGTCTATGAGGTGGTTCTCTaGGGTGCCCTGGTACCTCAACAGAGCCCGGCTGGCCAGAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: WLAWRELDGVYEVVL*GALVPQQSPAGQNL Trigger: GAGGTTCTGGCCAGCCGGGCTCTGTTGAGGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS CCA 90 bp | CTGCTCTTTGGCTGGCCTGGAGAGAGCTTGATGGAGTCTATGAGGTaGTTCTCTGCGGTGCCCTGGTACCTCAACAGAGCCCGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLFGWPGESLMESMR*FSAVPWYLNRARLA Trigger: GGCCAGCCGGGCTCTGTTGAGGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCAGCCAAAGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS-3UTR CAA 90 bp | GGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGGCCTGGCCTGGAGAGAGCTaGATGGAGTCTATGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GIALGMAAQLSSGVRREAWPGES*MESMRW Trigger: CCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCA...GGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CAA 90 bp | TTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGGCCGAGAAGCAGCATCTGCTCTTaGGCTGGCCTGGAGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHLEWLHSCHRESGGRPRSSICS*AGLERA Trigger: AGCTCTCTCCAGGCCAGCCAAAGAGCAGATGCTGCT...TCTCGGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCTTCCTGCAGCTGCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTGTGGCCTGGAGAGAGCTaGATGGAGTCTATGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCSCQPNGHRHRKALLWPGES*MESMRW Trigger: CCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCA...CAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCAGCTGCAGGAAGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCCAGCCTCCTAGCTGAGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGTGGCCTGGAGAGAGCTaGATGGAGTCTATGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPSLLAEYRLVGLHLEWLWPGES*MESMRW Trigger: CCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCA...CAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAGCTAGGAGGCTGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CAA 90 bp | GCTGAGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGAGCAGCATCTGCTCTTaGGCTGGCCTGGAGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AEYRLVGLHLEWLHSCHRSSICS*AGLERA Trigger: AGCTCTCTCCAGGCCAGCCAAAGAGCAGATGCTGCT...CCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS CCA 90 bp | GGAGAGAGCTTGATGGAGTCTATGAGGTGGTTCTCTGCGGTGCCCTaGTACCTCAACAGAGCCCGGCTGGCCAGAACCTCAAAGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GESLMESMRWFSAVP*YLNRARLARTSKAC Trigger: ACAAGCCTTTGAGGTTCTGGCCAGCCGGGCTCTGTTGAGGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS-3UTR CAA 90 bp | GGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGGCCTCCAATATGATGATTTaGGAGAGGATGCTGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GIALGMAAQLSSGVRREASNMMI*ERMLAP Trigger: GGGGGCCAGCATCCTCTCCAAAATCATCATATTGGA...GGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTGCAGCTGCCAGCCCAACGGTCACCGTCACAGGAAAGCCCTCTTGGCCTCTTCCAGATCGATTTaGTTCCCCAGCACCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: SSCSCQPNGHRHRKALLASSRSI*FPSTTM Trigger: CATGGTGGTGCTGGGGAACAAAATCGATCTGGAAGA...GGCCAAGAGGGCTTTCCTGTGACGGTGACCGTTGGGCTGGCAGCTGCAGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CAA 90 bp | GGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGTCCAATATGATGATTTaGGAGAGGATGCTGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GWWDCTWNGCTAVIGSPESNMMI*ERMLAP Trigger: GGGGGCCAGCATCCTCTCCAAAATCATCATATTGGA...CTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 |
||
| CDS-3UTR CAA 90 bp | TTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGGGAGGCCGAGATCTTCCAGATCGATTTaGTTCCCCAGCACCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: LHLEWLHSCHRESGGRPRSSRSI*FPSTTM Trigger: CATGGTGGTGCTGGGGAACAAAATCGATCTGGAAGA...TCTCGGCCTCCCTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CAA 90 bp | CATCTCCATCCAAACCTGTCGGTCCGTGGTGCTGAAGGGAGCAGTTTGTCTGCAAGCAGCATCTGCTCTTaGGCTGGCCTGGAGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLHPNLSVRGAEGSSLSASSICS*AGLERA Trigger: AGCTCTCTCCAGGCCAGCCAAAGAGCAGATGCTGCT...TGCAGACAAACTGCTCCCTTCAGCACCACGGACCGACAGGTTTGGATGGAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CAA 90 bp | CTGAGTACCGGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGAATGTTGATACCATaGAGCGGAACCGCTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSTGWWDCTWNGCTAVIGRMLIP*SGTAPD Trigger: GTCAGGAGCGGTTCCGCTCAATGGTATCAACATTCT...CCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCCGGTACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS CCA 90 bp | CTGCTCTTTGGCTGGCCTGGAGAGAGCTTGATGGAGTCTATGAGGTaGTTCTCTGCGGTGCCCTGGTACTGCAGCTTCAAAGTTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLFGWPGESLMESMR*FSAVPWYCSFKVVS Trigger: TGACACAACTTTGAAGCTGCAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCAGCCAAAGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129905.2 |
||
| CDS GCA 90 bp | TGGCTGGCCTGGAGAGAGCTTGATGGAGTCTATGAGGTGGTTCTCTaGGGTGCCCTGGTACTTCCTATCTTCCAGATCGATTTTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WLAWRELDGVYEVVL*GALVLPIFQIDFVP Trigger: GGGAACAAAATCGATCTGGAAGATAGGAAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064664.10 |
||
| CDS CCA 90 bp | GGAGAGAGCTTGATGGAGTCTATGAGGTGGTTCTCTGCGGTGCCCTaGTACTTCCTATCTTCCAGATCGATTTTGTTCCCCAGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: GESLMESMRWFSAVP*YFLSSRSILFPSTT Trigger: GGTGGTGCTGGGGAACAAAATCGATCTGGAAGATAGGAAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064664.10 |
||
| CDS CCA 90 bp | CTGCTCTTTGGCTGGCCTGGAGAGAGCTTGATGGAGTCTATGAGGTaGTTCTCTGCGGTGCCCTGGTACTTCCTATCTTCCAGATCGATT | + |
|
Preference number: 5 (lower is better) Translates to: LLFGWPGESLMESMR*FSAVPWYFLSSRSI Trigger: AATCGATCTGGAAGATAGGAAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCAGCCAAAGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064664.10 |
||
| CDS-3UTR CAA 90 bp | GGCTGGTGGGATTGCACTTGGAATGGCTGCACAGCTGTCATCGGGAGTCCGGAGAACCTTTGTAGAATGTaGATACCATTGAGCGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: GWWDCTWNGCTAVIGSPENLCRM*IPLSGT Trigger: GGTTCCGCTCAATGGTATCAACATTCTACAAAGGTT...CTCCGGACTCCCGATGACAGCTGTGCAGCCATTCCAAGTGCAATCCCACCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS-3UTR CAA 90 bp | AAGACCCTGAAAGTTCGTTCTGTCCACCTCCTTCAGAATGAGCCACCCTATCTGAGAATGTTGATACCATaGAGCGGAACCGCTCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KTLKVRSVHLLQNEPPYLRMLIP*SGTAPD Trigger: GTCAGGAGCGGTTCCGCTCAATGGTATCAACATTCT...CAGATAGGGTGGCTCATTCTGAAGGAGGTGGACAGAACGAACTTTCAGGGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS TCA 90 bp | CCTATCTTCCAGATCGATTTTGTTCCCCAGCACCACCATGGGATATaGCTGCTCCATAGGGATAATCTTTGCCAGGACATCATCCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PIFQIDFVPQHHHGI*LLHRDNLCQDIIPP Trigger: TGGAGGGATGATGTCCTGGCAAAGATTATCCCTATGGAGCAGTCATATCCCATGGTGGTGCTGGGGAACAAAATCGATCTGGAAGATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS CCA 90 bp | TGCCAGGACATCATCCCTCCAGATATCCAGGGCTTCAAAGGACTCTaGATCAGTAACATCAAATGCCAGGATACAGCCATCGGAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CQDIIPPDIQGFKGL*ISNIKCQDTAIGTF Trigger: AAAGGTTCCGATGGCTGTATCCTGGCATTTGATGTTACTGATCCAGAGTCCTTTGAAGCCCTGGATATCTGGAGGGATGATGTCCTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS GCA 90 bp | TCTTCCAGATCGATTTTGTTCCCCAGCACCACCATGGGATATGACTaGTCCATAGGGATAATCTTTGCCAGGACATCATCCCTCCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: SSRSILFPSTTMGYD*SIGIIFARTSSLQI Trigger: TATCTGGAGGGATGATGTCCTGGCAAAGATTATCCCTATGGAGCAGTCATATCCCATGGTGGTGCTGGGGAACAAAATCGATCTGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS CCA 90 bp | GCACTAACTTCAAAATATGGCATATCCTTCTCTTTACACCACCCATaGACCACCTCCTGGGACACCTGCAGCTTCAAAGTTGTGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ALTSKYGISFSLHHP*TTSWDTCSFKVVSS Trigger: GGATGACACAACTTTGAAGCTGCAGGTGTCCCAGGAGGTGGTCCATGGGTGGTGTAAAGAGAAGGATATGCCATATTTTGAAGTTAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136247.8 |
||
| CDS GCA 90 bp | ATATCCTTCTCTTTACACCACCCATGGACCACCTCCTGGGACACCTaGAGCTTCAAAGTTGTGTCATCCAATATGATGATTTTGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISFSLHHPWTTSWDT*SFKVVSSNMMILER Trigger: CCTCTCCAAAATCATCATATTGGATGACACAACTTTGAAGCTGCAGGTGTCCCAGGAGGTGGTCCATGGGTGGTGTAAAGAGAAGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136247.8 |
||
| CDS CCA 90 bp | GCACTAACTTCAAAATATGGCATATCCTTCTCTTTACACCACCCATaGACCACCTCCTGGGACACCTTCCTATCTTCCAGATCGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALTSKYGISFSLHHP*TTSWDTFLSSRSIL Trigger: CAAAATCGATCTGGAAGATAGGAAGGTGTCCCAGGAGGTGGTCCATGGGTGGTGTAAAGAGAAGGATATGCCATATTTTGAAGTTAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS-3UTR CAA 90 bp | ACTAGCCCAGGTTCAACATTCCTACAGCCTGGAAACAAGCTTCAGCCATTTTCTCAGAACCTCAAAGGCTaGTACCACATTGATGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: TSPGSTFLQPGNKLQPFSQNLKG*YHIDVI Trigger: AATGACATCAATGTGGTACAAGCCTTTGAGGTTCTG...AGAAAATGGCTGAAGCTTGTTTCCAGGCTGTAGGAATGTTGAACCTGGGCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS TCA 90 bp | AGTGTGGTCTGGTATTCCTCGAAAAATGTTTTGTGTACATATTGGTaGAGAAGAGAGGTCTTTCCCACGCCAAGTGCACCAACAATGATA | + |
|
Preference number: 5 (lower is better) Translates to: SVVWYSSKNVLCTYW*RREVFPTPSAPTMI Trigger: TATCATTGTTGGTGCACTTGGCGTGGGAAAGACCTCTCTTCTTCACCAATATGTACACAAAACATTTTTCGAGGAATACCAGACCACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 ENSMUST00000136247.8 |
||
| CDS GCA 90 bp | TTTGTGTACATATTGGTGAAGAAGAGAGGTCTTTCCCACGCCAAGTaGACCAACAATGATAAGTTTCAAGTCCACTTTCTTTCGGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: FVYILVKKRGLSHAK*TNNDKFQVHFLSGI Trigger: AATCCCCGAAAGAAAGTGGACTTGAAACTTATCATTGTTGGTGCACTTGGCGTGGGAAAGACCTCTCTTCTTCACCAATATGTACACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 ENSMUST00000136247.8 |
||
| CDS GCA 72 bp | TGGAGAGAGCTTGATGGAGTCTATGAGGTGGTTCTCTaGGGTGCCCTGGTACCTCAACAGAGCCCGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WRELDGVYEVVL*GALVPQQSPAG Trigger: GCCAGCCGGGCTCTGTTGAGGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS CCA 72 bp | GGCTGGCCTGGAGAGAGCTTGATGGAGTCTATGAGGTaGTTCTCTGCGGTGCCCTGGTACCTCAACAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GWPGESLMESMR*FSAVPWYLNRA Trigger: GGCTCTGTTGAGGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS CCA 72 bp | GGCTGGCCTGGAGAGAGCTTGATGGAGTCTATGAGGTaGTTCTCTGCGGTGCCCTGGTACTTCCTATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GWPGESLMESMR*FSAVPWYFLSS Trigger: GGAAGATAGGAAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064664.10 |
||
| CDS CCA 72 bp | GGCTGGCCTGGAGAGAGCTTGATGGAGTCTATGAGGTaGTTCTCTGCGGTGCCCTGGTACTGCAGCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GWPGESLMESMR*FSAVPWYCSFK Trigger: TTTGAAGCTGCAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCAGGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129905.2 |
||
| CDS CAA 72 bp | GCGGTGCCCTGGTACTTCCTATCTTCCAGATCGATTTaGTTCCCCAGCACCACCATGGGATATGACTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVPWYFLSSRSI*FPSTTMGYDCS Trigger: GGAGCAGTCATATCCCATGGTGGTGCTGGGGAACAAAATCGATCTGGAAGATAGGAAGTACCAGGGCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064664.10 |
||
| CDS GCA 72 bp | TGGAGAGAGCTTGATGGAGTCTATGAGGTGGTTCTCTaGGGTGCCCTGGTACTGCAGCTTCAAAGTTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: WRELDGVYEVVL*GALVLQLQSCV Trigger: GACACAACTTTGAAGCTGCAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129905.2 |
||
| CDS CAA 90 bp | CCATGGACCACCTCCTGGGACACCTTCCTATCTTCCAGATCGATTTaGTTCCCCAGCACCACCATGGGATATGACTGCTCCATAGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: PWTTSWDTFLSSRSI*FPSTTMGYDCSIGI Trigger: TATCCCTATGGAGCAGTCATATCCCATGGTGGTGCTGGGGAACAAAATCGATCTGGAAGATAGGAAGGTGTCCCAGGAGGTGGTCCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064679.9 |
||
| CDS CAA 90 bp | TGGTTCTCTGCGGTGCCCTGGTACTTCCTATCTTCCAGATCGATTTaGTTCCCCAGCACCACCATGGGATATGACTGCTCCATAGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: WFSAVPWYFLSSRSI*FPSTTMGYDCSIGI Trigger: TATCCCTATGGAGCAGTCATATCCCATGGTGGTGCTGGGGAACAAAATCGATCTGGAAGATAGGAAGTACCAGGGCACCGCAGAGAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064664.10 |
||
| CDS GCA 72 bp | TGGAGAGAGCTTGATGGAGTCTATGAGGTGGTTCTCTaGGGTGCCCTGGTACTTCCTATCTTCCAGATCGAT | + |
|
Preference number: 6 (lower is better) Translates to: WRELDGVYEVVL*GALVLPIFQID Trigger: ATCGATCTGGAAGATAGGAAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAAGCTCTCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064664.10 |
||
| CDS CAA 72 bp | ATGCCAGGATACAGCCATCGGAACCTTTGTAGAATGTaGATACCATTGAGCGGAACCGCTCCTGACCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: MPGYSHRNLCRM*IPLSGTAPDHL Trigger: CAGGTGGTCAGGAGCGGTTCCGCTCAATGGTATCAACATTCTACAAAGGTTCCGATGGCTGTATCCTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS CAA 72 bp | CCTCAACAGAGCCCGGCTGGCCAGAACCTCAAAGGCTaGTACCACATTGATGTCATTCTTCGCACTAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: PQQSPAGQNLKG*YHIDVILRTNF Trigger: GAAGTTAGTGCGAAGAATGACATCAATGTGGTACAAGCCTTTGAGGTTCTGGCCAGCCGGGCTCTGTTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064679.9 ENSMUST00000136247.8 |
||
| CDS CCA 72 bp | TTGATGGAGTCTATGAGGTGGTTCTCTGCGGTGCCCTaGTACTTCCTATCTTCCAGATCGATTTTGTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LMESMRWFSAVP*YFLSSRSILFP Trigger: GGGGAACAAAATCGATCTGGAAGATAGGAAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064664.10 |
||
| CDS CAA 90 bp | CCCTGGTACTGCAGCTTCAAAGTTGTGTCATCCAATATGATGATTTaGGAGAGGATGCTGGCCCCCAGTGTGGTCTGGTATTCCTCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PWYCSFKVVSSNMMI*ERMLAPSVVWYSSK Trigger: TTTCGAGGAATACCAGACCACACTGGGGGCCAGCATCCTCTCCAAAATCATCATATTGGATGACACAACTTTGAAGCTGCAGTACCAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129905.2 |
||
| CDS CAA 90 bp | TGGGACACCTGCAGCTTCAAAGTTGTGTCATCCAATATGATGATTTaGGAGAGGATGCTGGCCCCCAGTGTGGTCTGGTATTCCTCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: WDTCSFKVVSSNMMI*ERMLAPSVVWYSSK Trigger: TTTCGAGGAATACCAGACCACACTGGGGGCCAGCATCCTCTCCAAAATCATCATATTGGATGACACAACTTTGAAGCTGCAGGTGTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136247.8 |
||
| CDS TCA 72 bp | CAGATCGATTTTGTTCCCCAGCACCACCATGGGATATaGCTGCTCCATAGGGATAATCTTTGCCAGGACATC | + |
|
Preference number: 6 (lower is better) Translates to: QIDFVPQHHHGI*LLHRDNLCQDI Trigger: GATGTCCTGGCAAAGATTATCCCTATGGAGCAGTCATATCCCATGGTGGTGCTGGGGAACAAAATCGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS GCA 72 bp | TCGATTTTGTTCCCCAGCACCACCATGGGATATGACTaGTCCATAGGGATAATCTTTGCCAGGACATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SILFPSTTMGYD*SIGIIFARTSS Trigger: GGATGATGTCCTGGCAAAGATTATCCCTATGGAGCAGTCATATCCCATGGTGGTGCTGGGGAACAAAATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS CCA 72 bp | TTGATGGAGTCTATGAGGTGGTTCTCTGCGGTGCCCTaGTACTGCAGCTTCAAAGTTGTGTCATCCAATATG | + |
|
Preference number: 6 (lower is better) Translates to: LMESMRWFSAVP*YCSFKVVSSNM Trigger: CATATTGGATGACACAACTTTGAAGCTGCAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTCCATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129905.2 |
||
| CDS CAA 90 bp | TCCCAGATCTGCAGCTTCAAAGTTGTGTCATCCAATATGATGATTTaGGAGAGGATGCTGGCCCCCAGTGTGGTCTGGTATTCCTCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SQICSFKVVSSNMMI*ERMLAPSVVWYSSK Trigger: TTTCGAGGAATACCAGACCACACTGGGGGCCAGCATCCTCTCCAAAATCATCATATTGGATGACACAACTTTGAAGCTGCAGATCTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
||
| CDS GCA 72 bp | GAGTCTATGAGGTGGTTCTCTGCGGTGCCCTGGTACTaGAGCTTCAAAGTTGTGTCATCCAATATGATGATT | + |
|
Preference number: 6 (lower is better) Translates to: ESMRWFSAVPWY*SFKVVSSNMMI Trigger: AATCATCATATTGGATGACACAACTTTGAAGCTGCAGTACCAGGGCACCGCAGAGAACCACCTCATAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129905.2 |
||
| CDS GCA 72 bp | TCTTTACACCACCCATGGACCACCTCCTGGGACACCTaGAGCTTCAAAGTTGTGTCATCCAATATGATGATT | + |
|
Preference number: 6 (lower is better) Translates to: SLHHPWTTSWDT*SFKVVSSNMMI Trigger: AATCATCATATTGGATGACACAACTTTGAAGCTGCAGGTGTCCCAGGAGGTGGTCCATGGGTGGTGTAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136247.8 |
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| CDS CCA 72 bp | ATCATCCCTCCAGATATCCAGGGCTTCAAAGGACTCTaGATCAGTAACATCAAATGCCAGGATACAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: IIPPDIQGFKGL*ISNIKCQDTAI Trigger: GATGGCTGTATCCTGGCATTTGATGTTACTGATCCAGAGTCCTTTGAAGCCCTGGATATCTGGAGGGATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| CDS GCA 72 bp | CAGGGCTTCAAAGGACTCTGGATCAGTAACATCAAATaGCAGGATACAGCCATCGGAACCTTTGTAGAATGT | + |
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Preference number: 6 (lower is better) Translates to: QGFKGLWISNIK*QDTAIGTFVEC Trigger: ACATTCTACAAAGGTTCCGATGGCTGTATCCTGGCATTTGATGTTACTGATCCAGAGTCCTTTGAAGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 |
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| CDS CAA 72 bp | GGTCTGGTATTCCTCGAAAAATGTTTTGTGTACATATaGGTGAAGAAGAGAGGTCTTTCCCACGCCAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: GLVFLEKCFVYI*VKKRGLSHAKC Trigger: GCACTTGGCGTGGGAAAGACCTCTCTTCTTCACCAATATGTACACAAAACATTTTTCGAGGAATACCAGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 ENSMUST00000136247.8 |
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| CDS TCA 72 bp | TGGTATTCCTCGAAAAATGTTTTGTGTACATATTGGTaGAGAAGAGAGGTCTTTCCCACGCCAAGTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: WYSSKNVLCTYW*RREVFPTPSAP Trigger: TGGTGCACTTGGCGTGGGAAAGACCTCTCTTCTTCACCAATATGTACACAAAACATTTTTCGAGGAATACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 ENSMUST00000136247.8 |
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| CDS GCA 72 bp | ATATTGGTGAAGAAGAGAGGTCTTTCCCACGCCAAGTaGACCAACAATGATAAGTTTCAAGTCCACTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ILVKKRGLSHAK*TNNDKFQVHFL Trigger: AAGAAAGTGGACTTGAAACTTATCATTGTTGGTGCACTTGGCGTGGGAAAGACCTCTCTTCTTCACCAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064664.10 ENSMUST00000064679.9 ENSMUST00000129905.2 ENSMUST00000136247.8 |
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