Pregenerated sensors for RAB7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079477Ensembl transcript IDs: ENSMUST00000095048.6, ENSMUST00000113596.8, ENSMUST00000113597.8, ENSMUST00000113598.8, ENSMUST00000113600.10, ENSMUST00000203674.3, ENSMUST00000204126.2
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTaGCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: HAHCTPEHPGSLPYA*HTQGPRGGQLPQEP Trigger: GGGCTCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR GCA 90 bp | TTTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATaGCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: FPCPLHPRAPRVSAI*LPYTGPTRRAAAPG Trigger: TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR TCA 90 bp | TGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGAGCCCTaGCAGGCACAGGCTGGAGTTTGCTTGCTGTGTGTGTGTTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: CHTQGPRGGQLPQEP*QAQAGVCLLCVCCV Trigger: CACACAACACACACACAGCAAGCAAACTCCAGCCTGTGCCTGTCAGGGCTCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR GCA 90 bp | AGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTaGCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: SKLSMPTAPQSTQGL*HMPAIHRAHEAGSC Trigger: GCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR CCA 90 bp | CCAGGGCTCAACCCAAGAGACGGTGGGTTAGTGCTGGGCCACACTTaGGTGGGTGGGAAAGGAGGAGGGTCTGCTAACCTACAGGTACCA | + |
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Preference number: 1 (lower is better) Translates to: PGLNPRDGGLVLGHT*VGGKGGGSANLQVP Trigger: TGGTACCTGTAGGTTAGCAGACCCTCCTCCTTTCCCACCCACCCAAGTGTGGCCCAGCACTAACCCACCGTCTCTTGGGTTGAGCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR GCA 90 bp | AAGAACTCAGCCTACACCCTAGAATGTAGACCTCTGAAGGGGAAGTaGTCCAGGAAGCAAGCCATGATGCAGGGCAGGACCTCGGGAAGG | + |
|
Preference number: 1 (lower is better) Translates to: KNSAYTLECRPLKGK*SRKQAMMQGRTSGR Trigger: CCTTCCCGAGGTCCTGCCCTGCATCATGGCTTGCTTCCTGGAGCACTTCCCCTTCAGAGGTCTACATTCTAGGGTGTAGGCTGAGTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR GCA 90 bp | AACAGTTCTCTCACTCTCCAGTGGACAAAAAGAGTAAGCTTTCCATaGCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTG | + |
|
Preference number: 1 (lower is better) Translates to: NSSLTLQWTKRVSFP*PLHPRAPRVSAICL Trigger: CAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAGAGTGAGAGAACTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR CCA 90 bp | TTGTGTATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTaGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LCMCVCWVTVRWSFF*QLDVRAHVLVCLEE Trigger: CTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR GCA 90 bp | ACACTCTGTAATCCAGACAGGGTTCAACCCTCCACCTTGCACGCCTaGGTTAGAGGACTTAAACACACAATCCAGGAATTCCTTACACTA | + |
|
Preference number: 1 (lower is better) Translates to: TLCNPDRVQPSTLHA*VRGLKHTIQEFLTL Trigger: TAGTGTAAGGAATTCCTGGATTGTGTGTTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAACCCTGTCTGGATTACAGAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR CCA 90 bp | GCGTACATAATTCTTGTGTCTACTGTACAGAATACTGCCGCTAGCTaGACTTCCAAACTTGAGTCTCTAACACTCTGTAATCCAGACAGG | + |
|
Preference number: 1 (lower is better) Translates to: AYIILVSTVQNTAAS*TSKLESLTLCNPDR Trigger: CCTGTCTGGATTACAGAGTGTTAGAGACTCAAGTTTGGAAGTCCAGCTAGCGGCAGTATTCTGTACAGTAGACACAAGAATTATGTACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | CAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCGCTTTCCATGCCCACTaGACCCCAGAGCACCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QNSLLRTEPGHQPSHRTFAFHAH*TPEHPG Trigger: CCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGC...GAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | GAACTGCCAGGGCTCAACCCAAGAGACGGTGGGTTAGTGCTGGGCCACACTTGGGCTTTCCATGCCCACTaGACCCCAGAGCACCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ELPGLNPRDGGLVLGHTWAFHAH*TPEHPG Trigger: CCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGC...CCAAGTGTGGCCCAGCACTAACCCACCGTCTCTTGGGTTGAGCCCTGGCAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCCTGCCCCAGGAGCCCTaGCAGGCACAGGCTGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: LQWTKRVSFPCPLHPRAPLPQEP*QAQAGV Trigger: AACTCCAGCCTGTGCCTGTCAGGGCTCCTGGGGCAG...GGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR TCA 90 bp | TCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATATTTGGCAGCTGGATGTaGGAGCTCACGTTCTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SMPTAPQSTQGLCHMPAIFGSWM*ELTFWS Trigger: AGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAA...TATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR TCA 90 bp | CGGTGGGTTAGTGCTGGGCCACACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCGACACAGATGAACTGTaGACAGTTCTCTCACTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RWVSAGPHLGGWERRRVCDTDEL*TVLSLS Trigger: GGAGAGTGAGAGAACTGTTCACAGTTCATCTGTGTC...GCAGACCCTCCTCCTTTCCCACCCACCCAAGTGTGGCCCAGCACTAACCCACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCAAGGAACGTTCTGGTCTGTTTaGAGGAGGAGGGACGCATAT | + |
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Preference number: 2 (lower is better) Translates to: QPAQNGAWAPAFPQDLQGTFWSV*RRRDAY Trigger: ATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGT...TCCTTGAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCAAGGACGGTGGAGTTTCTTTTaGCAGCTGGATGTGAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: QPAQNGAWAPAFPQDLQGRWSFF*QLDVRA Trigger: AGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCG...TCCTTGAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CCA 90 bp | TCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATACTGACAGGCACAGGCTaGAGTTTGCTTGCTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SMPTAPQSTQGLCHMPAILTGTG*SLLAVC Trigger: ACACACAGCAAGCAAACTCCAGCCTGTGCCTGTCAG...TATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | TTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATGCACAGGCTGGAGTTTaGTTGCTGTGTGTGTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: FHAHCTPEHPGSLPYACHAQAGV*LLCVCC Trigger: ACAACACACACACAGCAAGCAAACTCCAGCCTGTGC...ATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | GTGCTCCAGGAAGCAAGCCATGATGCAGGGCAGGACCTCGGGAAGGGACAGAACTCCACCTTGCACGCCTaGGTTAGAGGACTTAAACAC | + |
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Preference number: 2 (lower is better) Translates to: VLQEASHDAGQDLGKGQNSTLHA*VRGLKH Trigger: GTGTTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGA...GTTCTGTCCCTTCCCGAGGTCCTGCCCTGCATCATGGCTTGCTTCCTGGAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | ACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCTAACCTACAGGTACCACAACCCTTCAACCCTCCACCTTaGACGCCTGCGTTAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: TWVGGKGGGSANLQVPQPFNPPP*TPALED Trigger: GTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAA...GGGTTGTGGTACCTGTAGGTTAGCAGACCCTCCTCCTTTCCCACCCACCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR TCA 90 bp | CAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCGACACAGATGAACTGTaGACAGTTCTCTCACTCTCC | + |
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Preference number: 2 (lower is better) Translates to: QNSLLRTEPGHQPSHRTFDTDEL*TVLSLS Trigger: GGAGAGTGAGAGAACTGTTCACAGTTCATCTGTGTC...GAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | ACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCTAACCTACAGGTACCACAACCCGCACAGGCTGGAGTTTaGTTGCTGTGTGTGTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: TWVGGKGGGSANLQVPQPAQAGV*LLCVCC Trigger: ACAACACACACACAGCAAGCAAACTCCAGCCTGTGC...GGGTTGTGGTACCTGTAGGTTAGCAGACCCTCCTCCTTTCCCACCCACCCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCAGCTGACAGGCACAGGCTaGAGTTTGCTTGCTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PVDKKSKLSMPTAPQSTQLTGTG*SLLAVC Trigger: ACACACAGCAAGCAAACTCCAGCCTGTGCCTGTCAG...CTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCCTGACAGGCACAGGCTaGAGTTTGCTTGCTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LQWTKRVSFPCPLHPRAPLTGTG*SLLAVC Trigger: ACACACAGCAAGCAAACTCCAGCCTGTGCCTGTCAG...GGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCAGACGTTCTGGTCTGTTTaGAGGAGGAGGGACGCATAT | + |
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Preference number: 2 (lower is better) Translates to: PVDKKSKLSMPTAPQSTQTFWSV*RRRDAY Trigger: ATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGT...CTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR TCA 90 bp | AATCCAGACAGGGTTCAACCCTCCACCTTGCACGCCTGCGTTAGAGGACTTAAATTTGGCAGCTGGATGTaGGAGCTCACGTTCTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: NPDRVQPSTLHACVRGLKFGSWM*ELTFWS Trigger: AGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAA...TTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAACCCTGTCTGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCTAACCTACAGGTACCACAACCCAATACTGCCGCTAGCTaGACTTCCAAACTTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: TWVGGKGGGSANLQVPQPNTAAS*TSKLES Trigger: AGACTCAAGTTTGGAAGTCCAGCTAGCGGCAGTATT...GGGTTGTGGTACCTGTAGGTTAGCAGACCCTCCTCCTTTCCCACCCACCCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR TCA 90 bp | CAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCATAATTAGACACAGATaGACTGTGAACAGTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: QNSLLRTEPGHQPSHRTFIIRHR*TVNSSL Trigger: GAGAGAACTGTTCACAGTTCATCTGTGTCTAATTAT...GAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | TCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATAGTATGTGTTTTTGTGTaGACGAGTGTGTTTTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: SMPTAPQSTQGLCHMPAIVCVFV*TSVFCV Trigger: TACACAAAACACACTCGTGCACACAAAAACACATAC...TATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | TTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATGTATGTGTTTTTGTGTaGACGAGTGTGTTTTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: FHAHCTPEHPGSLPYACHVCVFV*TSVFCV Trigger: TACACAAAACACACTCGTGCACACAAAAACACATAC...ATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR CAA 90 bp | AGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTaGGAGGAGGAGGGACGCATATTGAAGGCCTACGTGTGTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SFFWQLDVRAHVLVC*EEEGRILKAYVCVL Trigger: AAGAACACACACGTAGGCCTTCAATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCTGGACTTCCAAACTTGAGTCTCTAACACTCTGTAATCCAGACAGGGTTAGCACCCAGGGTCTCTaGCATATGCCTGCCATACAC | + |
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Preference number: 2 (lower is better) Translates to: ASWTSKLESLTLCNPDRVSTQGL*HMPAIH Trigger: GTGTATGGCAGGCATATGGCAGAGACCCTGGGTGCT...AACCCTGTCTGGATTACAGAGTGTTAGAGACTCAAGTTTGGAAGTCCAGCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR CAA 90 bp | GAGTCTCTAACACTCTGTAATCCAGACAGGGTTCAACCCTCCACCTaGCACGCCTGCGTTAGAGGACTTAAACACACAATCCAGGAATTC | + |
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Preference number: 2 (lower is better) Translates to: ESLTLCNPDRVQPST*HACVRGLKHTIQEF Trigger: GAATTCCTGGATTGTGTGTTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAACCCTGTCTGGATTACAGAGTGTTAGAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR TCA 90 bp | GTAACAAGCATTAACAGATACATACAAAACAGCCTGCTCAGAACGGAGCCTGGGTTTGGCAGCTGGATGTaGGAGCTCACGTTCTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: VTSINRYIQNSLLRTEPGFGSWM*ELTFWS Trigger: AGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAA...CCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGTATCTGTTAATGCTTGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | ACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCTAACCTACAGGTACCACAACCCGTATGTGTTTTTGTGTaGACGAGTGTGTTTTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: TWVGGKGGGSANLQVPQPVCVFV*TSVFCV Trigger: TACACAAAACACACTCGTGCACACAAAAACACATAC...GGGTTGTGGTACCTGTAGGTTAGCAGACCCTCCTCCTTTCCCACCCACCCAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCTGGACTTCCAAACTTGAGTCTCTAACACTCTGTAATCCAGACAGGGTTACATACAAAACAGCCTaGTCAGAACGGAGCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ASWTSKLESLTLCNPDRVTYKTA*SERSLG Trigger: GCCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGT...AACCCTGTCTGGATTACAGAGTGTTAGAGACTCAAGTTTGGAAGTCCAGCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCTCTCACTCTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCAACGTTCTGGTCTGTTTaGAGGAGGAGGGACGCATAT | + |
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Preference number: 2 (lower is better) Translates to: QFSHSPVDKKSKLSMPTATFWSV*RRRDAY Trigger: ATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGT...TGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAGAGTGAGAGAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTACCACAACCCTGAAAGGAGCGCCTTCTAGAACAAAGGTAGAGTCACTGAATACTGCCGCTAGCTaGACTTCCAAACTTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: TGTTTLKGAPSRTKVESLNTAAS*TSKLES Trigger: AGACTCAAGTTTGGAAGTCCAGCTAGCGGCAGTATT...CAGTGACTCTACCTTTGTTCTAGAAGGCGCTCCTTTCAGGGTTGTGGTACCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGACAGGGTTCAACCCTCCACCTTGCACGCCTGCGTTAGAGGACTTAAACATAATTAGACACAGATaGACTGTGAACAGTTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: IQTGFNPPPCTPALEDLNIIRHR*TVNSSL Trigger: GAGAGAACTGTTCACAGTTCATCTGTGTCTAATTAT...GTTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAACCCTGTCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR CAA 90 bp | CAGGCTGGAGTTTGCTTGCTGTGTGTGTGTTGTGTGTATGTGTTTTaGTGTGCACGAGTGTGTTTTGTGTATGTGTGTGTGTTGGGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: QAGVCLLCVCCVYVF*CARVCFVYVCVLGN Trigger: GTTACCCAACACACACACATACACAAAACACACTCGTGCACACAAAAACACATACACACAACACACACACAGCAAGCAAACTCCAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGAAAATTTAGACACAGAAGGGAACTGTCTAGTTCAGTTTTCCCTTCAGAGTTTGGCAGCTGGATGTaGGAGCTCACGTTCTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: FGKFRHRRELSSSVFPSEFGSWM*ELTFWS Trigger: AGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAA...CTCTGAAGGGAAAACTGAACTAGACAGTTCCCTTCTGTGTCTAAATTTTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCATTAACAGATACATACAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCATAATTAGACACAGATaGACTGTGAACAGTTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QALTDTYKTACSERSLGTIIRHR*TVNSSL Trigger: GAGAGAACTGTTCACAGTTCATCTGTGTCTAATTAT...GGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGTATCTGTTAATGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR CAA 90 bp | AAGGTAGAGTCACTGGGACAGGTCTGGTGGGTTCTCCTTTCCTCTTaGAGTAGGATAGTGACAAAAGGGCATCATAAAGTGTTGAATATA | + |
|
Preference number: 2 (lower is better) Translates to: KVESLGQVWWVLLSS*SRIVTKGHHKVLNI Trigger: TATATTCAACACTTTATGATGCCCTTTTGTCACTATCCTACTCAAAGAGGAAAGGAGAACCCACCAGACCTGTCCCAGTGACTCTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR GCA 90 bp | GTTCTTGTTAAATTTTATTGGCATCACGTTCGTCTCTTTACAGAAGAACTCAGCAGAGTAAGCTTTCCATaGCCACTGCACCCCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: VLVKFYWHHVRLFTEELSRVSFP*PLHPRA Trigger: TGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCT...GCTGAGTTCTTCTGTAAAGAGACGAACGTGATGCCAATAAAATTTAACAAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113600.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGAAAATTTAGACACAGAAGGGAACTGTCTAGTTCAGTTTTCCCTTCAGAGCGGTGGAGTTTCTTTTaGCAGCTGGATGTGAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: FGKFRHRRELSSSVFPSERWSFF*QLDVRA Trigger: AGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCG...CTCTGAAGGGAAAACTGAACTAGACAGTTCCCTTCTGTGTCTAAATTTTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR GCA 72 bp | CCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATaGCTGCCATACACAGGGCCCACGAGGCGGGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PLHPRAPRVSAI*LPYTGPTRRAA Trigger: AGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR GCA 72 bp | TCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTaGCATATGCCTGCCATACACAGGGCCCACGAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SMPTAPQSTQGL*HMPAIHRAHEA Trigger: CGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGATCGGTGGAGTTTCTTTaGGCAGCTGGATGTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SAICLPYTGPTRRAAAPGSVEFL*AAGCES Trigger: GCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGA...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR CCA 72 bp | AGGGACAGAACTGCCAGGGCTCAACCCAAGAGACGGTaGGTTAGTGCTGGGCCACACTTGGGTGGGTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RDRTARAQPKRR*VSAGPHLGGWE Trigger: TTCCCACCCACCCAAGTGTGGCCCAGCACTAACCCACCGTCTCTTGGGTTGAGCCCTGGCAGTTCTGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGACCTACGTGTGTGTTCTaGGTCTGTGAAGGACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SAICLPYTGPTRRAAAPGPTCVF*VCEGLC Trigger: ACAGAGTCCTTCACAGACCAAGAACACACACGTAGG...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCCTACGTGTGTGTTCTaGGTCTGTGAAGGACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AFHAHCTPEHPGSLPYACPTCVF*VCEGLC Trigger: ACAGAGTCCTTCACAGACCAAGAACACACACGTAGG...GCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATACAGGCTGGAGTTTGCTaGCTGTGTGTGTGTTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SMPTAPQSTQGLCHMPAIQAGVC*LCVCCV Trigger: CACACAACACACACACAGCAAGCAAACTCCAGCCTG...TATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATCAGGCTGGAGTTTGCTaGCTGTGTGTGTGTTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FHAHCTPEHPGSLPYACHQAGVC*LCVCCV Trigger: CACACAACACACACACAGCAAGCAAACTCCAGCCTG...ATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR CCA 72 bp | AACCCAAGAGACGGTGGGTTAGTGCTGGGCCACACTTaGGTGGGTGGGAAAGGAGGAGGGTCTGCTAACCTA | + |
|
Preference number: 3 (lower is better) Translates to: NPRDGGLVLGHT*VGGKGGGSANL Trigger: TAGGTTAGCAGACCCTCCTCCTTTCCCACCCACCCAAGTGTGGCCCAGCACTAACCCACCGTCTCTTGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR GCA 72 bp | CTCACTCTCCAGTGGACAAAAAGAGTAAGCTTTCCATaGCCACTGCACCCCAGAGCACCCAGGGTCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LTLQWTKRVSFP*PLHPRAPRVSA Trigger: GGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAGAGTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCCAGGCTGGAGTTTGCTaGCTGTGTGTGTGTTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQWTKRVSFPCPLHPRAPQAGVC*LCVCCV Trigger: CACACAACACACACACAGCAAGCAAACTCCAGCCTG...GGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGTACCACAACCCTGAAAGGAGCGCCTTCTAGAACAAAGGTAGAGTCACTGGTTCAACCCTCCACCTaGCACGCCTGCGTTAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TGTTTLKGAPSRTKVESLVQPST*HACVRG Trigger: TCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAAC...CAGTGACTCTACCTTTGTTCTAGAAGGCGCTCCTTTCAGGGTTGTGGTACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGACGCATATTCCTACGTGTGTGTTCTaGGTCTGTGAAGGACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AGCESSRSGLFGGGGTHIPTCVF*VCEGLC Trigger: ACAGAGTCCTTCACAGACCAAGAACACACACGTAGG...AATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR TCA 72 bp | ACGTTCTGGTCTGTTTGGAGGAGGAGGGACGCATATTaGAGGCCTACGTGTGTGTTCTTGGTCTGTGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TFWSVWRRRDAY*RPTCVFLVCEG Trigger: TCCTTCACAGACCAAGAACACACACGTAGGCCTTCAATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR GCA 72 bp | CACTCTGTAATCCAGACAGGGTTCAACCCTCCACCTTaGACGCCTGCGTTAGAGGACTTAAACACACAATCC | + |
|
Preference number: 3 (lower is better) Translates to: HSVIQTGFNPPP*TPALEDLNTQS Trigger: GGATTGTGTGTTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAACCCTGTCTGGATTACAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CAA 90 bp | CAAGCATTAACAGATACATACAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCCCTACGTGTGTGTTCTaGGTCTGTGAAGGACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QALTDTYKTACSERSLGTPTCVF*VCEGLC Trigger: ACAGAGTCCTTCACAGACCAAGAACACACACGTAGG...GGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGTATCTGTTAATGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTCTCTCACTCTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCATCGGTGGAGTTTCTTTaGGCAGCTGGATGTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QFSHSPVDKKSKLSMPTASVEFL*AAGCES Trigger: GCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGA...TGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAGAGTGAGAGAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR CCA 72 bp | TGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTaGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CVCWVTVRWSFF*QLDVRAHVLVC Trigger: ACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| 3UTR-3UTR CAA 90 bp | CAGTTCTCTCACTCTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCTACGTGTGTGTTCTaGGTCTGTGAAGGACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QFSHSPVDKKSKLSMPTAPTCVF*VCEGLC Trigger: ACAGAGTCCTTCACAGACCAAGAACACACACGTAGG...TGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAGAGTGAGAGAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR CCA 72 bp | TGTGTGCACGAGTGTGTTTTGTGTATGTGTGTGTGTTaGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CVHECVLCMCVC*VTVRWSFFWQL Trigger: CAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATACACAAAACACACTCGTGCACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR GCA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGAACAACTGCAGCTTTCTaGGGAGGCCTTGGCCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAICLPYTGPTRRAAAPGTTAAF*GGLGPV Trigger: GACCGGGCCAAGGCCTCCGCAGAAAGCTGCAGTTGT...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CCA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGATCCCGGGGGCTGGCCTaGATGAGAAACTCGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAICLPYTGPTRRAAAPGSRGLA*MRNSSL Trigger: GAGAGACGAGTTTCTCATCCAGGCCAGCCCCCGGGA...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | CAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCGGGGGCTGGCCTGGATaGGAAACTCGTCTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QNSLLRTEPGHQPSHRTFGGWPG*ETRLSS Trigger: GCTGGAGAGACGAGTTTCTCATCCAGGCCAGCCCCC...GAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | TTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATACAACTGCAGCTTTCTaGGGAGGCCTTGGCCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FHAHCTPEHPGSLPYACHTTAAF*GGLGPV Trigger: GACCGGGCCAAGGCCTCCGCAGAAAGCTGCAGTTGT...ATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | CAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCACAACTGCAGCTTTCTaGGGAGGCCTTGGCCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNSLLRTEPGHQPSHRTFTTAAF*GGLGPV Trigger: GACCGGGCCAAGGCCTCCGCAGAAAGCTGCAGTTGT...GAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGACAGAACACAGCAATCTaGACCTCTGTAGAAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SAICLPYTGPTRRAAAPGQNTAI*TSVEGH Trigger: GTGGCCTTCTACAGAGGTGCAGATTGCTGTGTTCTG...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGATTCCGAGCAATTGTCTaGAAGGCCTGCTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: SAICLPYTGPTRRAAAPGFRAIV*KACSTL Trigger: CAATGTGGAGCAGGCCTTCCAGACAATTGCTCGGAA...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | GCTTTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCTTTCTGCGGAGGCCTTaGCCCGGTCATTCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFHAHCTPEHPGSLPYACFLRRP*PGHSCP Trigger: TGGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAA...GCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCAAGGAAGCTGTCGAGGGTTTTaGAAGTGTTGGGGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPAQNGAWAPAFPQDLQGSCRGF*KCWGQS Trigger: TGACTGCCCCCAACACTTTCAAAACCCTCGACAGCT...TCCTTGAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GCCTACACCCTAGAATGTAGACCTCTGAAGGGGAAGTGCTCCAGGAAGCAAGCCGGGGGCTGGCCTGGATaGGAAACTCGTCTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AYTLECRPLKGKCSRKQAGGWPG*ETRLSS Trigger: GCTGGAGAGACGAGTTTCTCATCCAGGCCAGCCCCC...GGCTTGCTTCCTGGAGCACTTCCCCTTCAGAGGTCTACATTCTAGGGTGTAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | GCTTTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCATTGTCTGGAAGGCCTaGTCCACATTGATGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AFHAHCTPEHPGSLPYACIVWKA*STLMAS Trigger: GGAGGCCATCAATGTGGAGCAGGCCTTCCAGACAAT...GCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCAAGGAATTGTCTGGAAGGCCTaGTCCACATTGATGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPAQNGAWAPAFPQDLQGIVWKA*STLMAS Trigger: GGAGGCCATCAATGTGGAGCAGGCCTTCCAGACAAT...TCCTTGAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | GCTTTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCCACCATCACCTCCTTaGTCAGAAAGTCCGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: AFHAHCTPEHPGSLPYACPPSPP*SESPLL Trigger: TAGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGG...GCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | CGGTGGGTTAGTGCTGGGCCACACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCTTCCGAGCAATTGTCTaGAAGGCCTGCTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: RWVSAGPHLGGWERRRVCFRAIV*KACSTL Trigger: CAATGTGGAGCAGGCCTTCCAGACAATTGCTCGGAA...GCAGACCCTCCTCCTTTCCCACCCACCCAAGTGTGGCCCAGCACTAACCCACCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | CAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCAGCTGTCGAGGGTTTTaGAAGTGTTGGGGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNSLLRTEPGHQPSHRTFSCRGF*KCWGQS Trigger: TGACTGCCCCCAACACTTTCAAAACCCTCGACAGCT...GAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCAGACAACTGCAGCTTTCTaGGGAGGCCTTGGCCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVDKKSKLSMPTAPQSTQTTAAF*GGLGPV Trigger: GACCGGGCCAAGGCCTCCGCAGAAAGCTGCAGTTGT...CTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATACCACCATCACCTCCTTaGTCAGAAAGTCCGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SMPTAPQSTQGLCHMPAIPPSPP*SESPLL Trigger: TAGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGG...TATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATCCACCATCACCTCCTTaGTCAGAAAGTCCGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FHAHCTPEHPGSLPYACHPPSPP*SESPLL Trigger: TAGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGG...ATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | CAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCCAGAACACAGCAATCTaGACCTCTGTAGAAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QNSLLRTEPGHQPSHRTFQNTAI*TSVEGH Trigger: GTGGCCTTCTACAGAGGTGCAGATTGCTGTGTTCTG...GAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | TCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATACAGAACACAGCAATCTaGACCTCTGTAGAAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SMPTAPQSTQGLCHMPAIQNTAI*TSVEGH Trigger: GTGGCCTTCTACAGAGGTGCAGATTGCTGTGTTCTG...TATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | GAACTGCCAGGGCTCAACCCAAGAGACGGTGGGTTAGTGCTGGGCCACACTTGGCAGAACACAGCAATCTaGACCTCTGTAGAAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELPGLNPRDGGLVLGHTWQNTAI*TSVEGH Trigger: GTGGCCTTCTACAGAGGTGCAGATTGCTGTGTTCTG...CCAAGTGTGGCCCAGCACTAACCCACCGTCTCTTGGGTTGAGCCCTGGCAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GCTTTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCTCACATACTGGTTCATaGGAGAGGTCTTTCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AFHAHCTPEHPGSLPYACSHTGS*ERSFQH Trigger: GTGTTGGAAAGACCTCTCTCATGAACCAGTATGTGA...GCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | TGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGGGGGCTGGCCTGGATaGGAAACTCGTCTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSFFWQLDVRAHVLVCLEGGWPG*ETRLSS Trigger: GCTGGAGAGACGAGTTTCTCATCCAGGCCAGCCCCC...CTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | ACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCTAACCTACAGGTACCACAACCCCCACCATCACCTCCTTaGTCAGAAAGTCCGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TWVGGKGGGSANLQVPQPPPSPP*SESPLL Trigger: TAGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGG...GGGTTGTGGTACCTGTAGGTTAGCAGACCCTCCTCCTTTCCCACCCACCCAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR CAA 72 bp | TGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTaGGAGGAGGAGGGACGCATATTGAAGGCCTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: WQLDVRAHVLVC*EEEGRILKAYV Trigger: CACGTAGGCCTTCAATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GTGCTCCAGGAAGCAAGCCATGATGCAGGGCAGGACCTCGGGAAGGGACAGAACTCACATACTGGTTCATaGGAGAGGTCTTTCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VLQEASHDAGQDLGKGQNSHTGS*ERSFQH Trigger: GTGTTGGAAAGACCTCTCTCATGAACCAGTATGTGA...GTTCTGTCCCTTCCCGAGGTCCTGCCCTGCATCATGGCTTGCTTCCTGGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR TCA 90 bp | CAGTTCTCTCACTCTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCAGGGGGCTGGCCTGGATaGGAAACTCGTCTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFSHSPVDKKSKLSMPTAGGWPG*ETRLSS Trigger: GCTGGAGAGACGAGTTTCTCATCCAGGCCAGCCCCC...TGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAGAGTGAGAGAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCATTAACAGATACATACAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCTCCCGGGGGCTGGCCTaGATGAGAAACTCGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QALTDTYKTACSERSLGTSRGLA*MRNSSL Trigger: GAGAGACGAGTTTCTCATCCAGGCCAGCCCCCGGGA...GGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGTATCTGTTAATGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGAGGAGGGACGCATATTGAAGGCCTACGTGTGTGTTCTTGGTCTGTGAAGAGCTGTCGAGGGTTTTaGAAGTGTTGGGGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGGTHIEGLRVCSWSVKSCRGF*KCWGQS Trigger: TGACTGCCCCCAACACTTTCAAAACCCTCGACAGCT...CTTCACAGACCAAGAACACACACGTAGGCCTTCAATATGCGTCCCTCCTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GTAACAAGCATTAACAGATACATACAAAACAGCCTGCTCAGAACGGAGCCTGGGGGGGGCTGGCCTGGATaGGAAACTCGTCTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTSINRYIQNSLLRTEPGGGWPG*ETRLSS Trigger: GCTGGAGAGACGAGTTTCTCATCCAGGCCAGCCCCC...CCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGTATCTGTTAATGCTTGTTAC 53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GAACTGCCAGGGCTCAACCCAAGAGACGGTGGGTTAGTGCTGGGCCACACTTGGCATTCTTGTCCAGTTTaGTGGGTTCAGGGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ELPGLNPRDGGLVLGHTWHSCPV*WVQGIH Trigger: ATGAATTCCCTGAACCCATCAAACTGGACAAGAATG...CCAAGTGTGGCCCAGCACTAACCCACCGTCTCTTGGGTTGAGCCCTGGCAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | CTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCCAGAACACAGCAATCTaGACCTCTGTAGAAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQWTKRVSFPCPLHPRAPQNTAI*TSVEGH Trigger: GTGGCCTTCTACAGAGGTGCAGATTGCTGTGTTCTG...GGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CCA 90 bp | CGGTGGGTTAGTGCTGGGCCACACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCTTCTTGTTCACATACTaGTTCATGAGAGAGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RWVSAGPHLGGWERRRVCFLFTY*FMREVF Trigger: AAAGACCTCTCTCATGAACCAGTATGTGAACAAGAA...GCAGACCCTCCTCCTTTCCCACCCACCCAAGTGTGGCCCAGCACTAACCCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | CAGGCACAGGCTGGAGTTTGCTTGCTGTGTGTGTGTTGTGTGTATGTGTTTTTGTCCCGGGGGCTGGCCTaGATGAGAAACTCGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAQAGVCLLCVCCVYVFLSRGLA*MRNSSL Trigger: GAGAGACGAGTTTCTCATCCAGGCCAGCCCCCGGGA...CAAAAACACATACACACAACACACACACAGCAAGCAAACTCCAGCCTGTGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR GCA 90 bp | GTAACAAGCATTAACAGATACATACAAAACAGCCTGCTCAGAACGGAGCCTGGGACAACTGCAGCTTTCTaGGGAGGCCTTGGCCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTSINRYIQNSLLRTEPGTTAAF*GGLGPV Trigger: GACCGGGCCAAGGCCTCCGCAGAAAGCTGCAGTTGT...CCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGTATCTGTTAATGCTTGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CCA 90 bp | TATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTTCCCGGGGGCTGGCCTaGATGAGAAACTCGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YVCVLGNCSVEFLLAAGCSRGLA*MRNSSL Trigger: GAGAGACGAGTTTCTCATCCAGGCCAGCCCCCGGGA...ACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CCA 90 bp | TGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGTTTCTGCGGAGGCCTTaGCCCGGTCATTCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WSFFWQLDVRAHVLVCLEFLRRP*PGHSCP Trigger: TGGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAA...CTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTTTCTGCGGAGGCCTTaGCCCGGTCATTCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGNCSVEFLLAAGCESSRFLRRP*PGHSCP Trigger: TGGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAA...ACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | CAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCCTTTGTACTGGTTACTaGACTTCTTGTTCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: QNSLLRTEPGHQPSHRTFLCTGY*TSCSHT Trigger: AGTATGTGAACAAGAAGTTCAGTAACCAGTACAAAG...GAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | TCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATACTTTGTACTGGTTACTaGACTTCTTGTTCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: SMPTAPQSTQGLCHMPAILCTGY*TSCSHT Trigger: AGTATGTGAACAAGAAGTTCAGTAACCAGTACAAAG...TATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATTTCTTGTTCACATACTaGTTCATGAGAGAGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FHAHCTPEHPGSLPYACHFLFTY*FMREVF Trigger: AAAGACCTCTCTCATGAACCAGTATGTGAACAAGAA...ATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATATTGTGGCTTTGTACTaGTTACTGAACTTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FHAHCTPEHPGSLPYACHIVALY*LLNFLF Trigger: GAACAAGAAGTTCAGTAACCAGTACAAAGCCACAAT...ATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | AATCCAGACAGGGTTCAACCCTCCACCTTGCACGCCTGCGTTAGAGGACTTAAACCTGTGCCCTCTTTGTaGCCACTTGTCTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPDRVQPSTLHACVRGLKPVPSL*PLVCFP Trigger: TGGAAAACAGACAAGTGGCCACAAAGAGGGCACAGG...TTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAACCCTGTCTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | GTGTATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATTTCTGCGGAGGCCTTaGCCCGGTCATTCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VYVCVLGNCSVEFLLAAGFLRRP*PGHSCP Trigger: TGGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAA...TCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GTGTATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGAAGCTGTCGAGGGTTTTaGAAGTGTTGGGGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VYVCVLGNCSVEFLLAAGSCRGF*KCWGQS Trigger: TGACTGCCCCCAACACTTTCAAAACCCTCGACAGCT...TCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTCCTGTGCCCTCTTTGTaGCCACTTGTCTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGNCSVEFLLAAGCESSRPVPSL*PLVCFP Trigger: TGGAAAACAGACAAGTGGCCACAAAGAGGGCACAGG...ACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGCCTGTGCCCTCTTTGTaGCCACTTGTCTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WSFFWQLDVRAHVLVCLEPVPSL*PLVCFP Trigger: TGGAAAACAGACAAGTGGCCACAAAGAGGGCACAGG...CTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCATTAACAGATACATACAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCTTCCGAGCAATTGTCTaGAAGGCCTGCTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: QALTDTYKTACSERSLGTFRAIV*KACSTL Trigger: CAATGTGGAGCAGGCCTTCCAGACAATTGCTCGGAA...GGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGTATCTGTTAATGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTTTTCTGCGGAGGCCTTaGCCCGGTCATTCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YVCVLGNCSVEFLLAAGCFLRRP*PGHSCP Trigger: TGGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAA...ACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR CAA 72 bp | ACACTCTGTAATCCAGACAGGGTTCAACCCTCCACCTaGCACGCCTGCGTTAGAGGACTTAAACACACAATC | + |
|
Preference number: 4 (lower is better) Translates to: TLCNPDRVQPST*HACVRGLKHTI Trigger: GATTGTGTGTTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAACCCTGTCTGGATTACAGAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTCACATACTGGTTCATaGGAGAGGTCTTTCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TVRWSFFWQLDVRAHVLVSHTGS*ERSFQH Trigger: GTGTTGGAAAGACCTCTCTCATGAACCAGTATGTGA...GACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GCTAGCTGGACTTCCAAACTTGAGTCTCTAACACTCTGTAATCCAGACAGGGTTAGCTGTCGAGGGTTTTaGAAGTGTTGGGGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASWTSKLESLTLCNPDRVSCRGF*KCWGQS Trigger: TGACTGCCCCCAACACTTTCAAAACCCTCGACAGCT...AACCCTGTCTGGATTACAGAGTGTTAGAGACTCAAGTTTGGAAGTCCAGCTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGACGCATATTCATTCTTGTCCAGTTTaGTGGGTTCAGGGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGCESSRSGLFGGGGTHIHSCPV*WVQGIH Trigger: ATGAATTCCCTGAACCCATCAAACTGGACAAGAATG...AATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | CTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGACGCATATTGCATTCTTGTCCAGTTTaGTGGGTTCAGGGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDVRAHVLVCLEEEGRILHSCPV*WVQGIH Trigger: ATGAATTCCCTGAACCCATCAAACTGGACAAGAATG...CAATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGAGGAGGGACGCATATTGAAGGCCTACGTGTGTGTTCTTGGTCTGTGAAGCATTCTTGTCCAGTTTaGTGGGTTCAGGGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGGGTHIEGLRVCSWSVKHSCPV*WVQGIH Trigger: ATGAATTCCCTGAACCCATCAAACTGGACAAGAATG...CTTCACAGACCAAGAACACACACGTAGGCCTTCAATATGCGTCCCTCCTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR GCA 90 bp | TATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTATTGTCTGGAAGGCCTaGTCCACATTGATGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YVCVLGNCSVEFLLAAGCIVWKA*STLMAS Trigger: GGAGGCCATCAATGTGGAGCAGGCCTTCCAGACAAT...ACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | ACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCTAACCTACAGGTACCACAACCCATTGTGGCTTTGTACTaGTTACTGAACTTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TWVGGKGGGSANLQVPQPIVALY*LLNFLF Trigger: GAACAAGAAGTTCAGTAACCAGTACAAAGCCACAAT...GGGTTGTGGTACCTGTAGGTTAGCAGACCCTCCTCCTTTCCCACCCACCCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTCCACCATCACCTCCTTaGTCAGAAAGTCCGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YVCVLGNCSVEFLLAAGCPPSPP*SESPLL Trigger: TAGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGG...ACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | CCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCAGTTCTTGTTCACATACTaGTTCATGAGAGAGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVDKKSKLSMPTAPQSTQFLFTY*FMREVF Trigger: AAAGACCTCTCTCATGAACCAGTATGTGAACAAGAA...CTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTCCTGTGCCCTCTTTGTaGCCACTTGTCTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YVCVLGNCSVEFLLAAGCPVPSL*PLVCFP Trigger: TGGAAAACAGACAAGTGGCCACAAAGAGGGCACAGG...ACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | GCTAGCTGGACTTCCAAACTTGAGTCTCTAACACTCTGTAATCCAGACAGGGTTCCTGTGCCCTCTTTGTaGCCACTTGTCTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASWTSKLESLTLCNPDRVPVPSL*PLVCFP Trigger: TGGAAAACAGACAAGTGGCCACAAAGAGGGCACAGG...AACCCTGTCTGGATTACAGAGTGTTAGAGACTCAAGTTTGGAAGTCCAGCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GTGTATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATCACATACTGGTTCATaGGAGAGGTCTTTCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VYVCVLGNCSVEFLLAAGSHTGS*ERSFQH Trigger: GTGTTGGAAAGACCTCTCTCATGAACCAGTATGTGA...TCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | TTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGACTTTGTACTGGTTACTaGACTTCTTGTTCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: FWQLDVRAHVLVCLEEEGLCTGY*TSCSHT Trigger: AGTATGTGAACAAGAAGTTCAGTAACCAGTACAAAG...TCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | GCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGACGCATATTATTGTGGCTTTGTACTaGTTACTGAACTTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGCESSRSGLFGGGGTHIIVALY*LLNFLF Trigger: GAACAAGAAGTTCAGTAACCAGTACAAAGCCACAAT...AATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR CAA 72 bp | ACAGGCACAGGCTGGAGTTTGCTTGCTGTGTGTGTGTaGTGTGTATGTGTTTTTGTGTGCACGAGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGTGWSLLAVCV*CVCVFVCTSVF Trigger: AAACACACTCGTGCACACAAAAACACATACACACAACACACACACAGCAAGCAAACTCCAGCCTGTGCCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | GCTAGCTGGACTTCCAAACTTGAGTCTCTAACACTCTGTAATCCAGACAGGGTTTCACATACTGGTTCATaGGAGAGGTCTTTCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ASWTSKLESLTLCNPDRVSHTGS*ERSFQH Trigger: GTGTTGGAAAGACCTCTCTCATGAACCAGTATGTGA...AACCCTGTCTGGATTACAGAGTGTTAGAGACTCAAGTTTGGAAGTCCAGCTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | CAGTTCTCTCACTCTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACATTCTTGTCCAGTTTaGTGGGTTCAGGGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QFSHSPVDKKSKLSMPTAHSCPV*WVQGIH Trigger: ATGAATTCCCTGAACCCATCAAACTGGACAAGAATG...TGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAGAGTGAGAGAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| 3UTR CAA 72 bp | TTGTGTGCACGAGTGTGTTTTGTGTATGTGTGTGTGTaGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCARVCFVYVCV*GNCSVEFLLAA Trigger: AGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATACACAAAACACACTCGTGCACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | TGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGCTTTGTACTGGTTACTaGACTTCTTGTTCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: WSFFWQLDVRAHVLVCLELCTGY*TSCSHT Trigger: AGTATGTGAACAAGAAGTTCAGTAACCAGTACAAAG...CTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGTTCTTGTTCACATACTaGTTCATGAGAGAGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSFFWQLDVRAHVLVCLEFLFTY*FMREVF Trigger: AAAGACCTCTCTCATGAACCAGTATGTGAACAAGAA...CTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | ATAATTCTTGTGTCTACTGTACAGAATACTGCCGCTAGCTGGACTTCCAAACTTTTCCGAGCAATTGTCTaGAAGGCCTGCTCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: IILVSTVQNTAASWTSKLFRAIV*KACSTL Trigger: CAATGTGGAGCAGGCCTTCCAGACAATTGCTCGGAA...AAGTTTGGAAGTCCAGCTAGCGGCAGTATTCTGTACAGTAGACACAAGAATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | TATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTTTCTTGTTCACATACTaGTTCATGAGAGAGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YVCVLGNCSVEFLLAAGCFLFTY*FMREVF Trigger: AAAGACCTCTCTCATGAACCAGTATGTGAACAAGAA...ACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | GTAACAAGCATTAACAGATACATACAAAACAGCCTGCTCAGAACGGAGCCTGGGATTGTGGCTTTGTACTaGTTACTGAACTTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTSINRYIQNSLLRTEPGIVALY*LLNFLF Trigger: GAACAAGAAGTTCAGTAACCAGTACAAAGCCACAAT...CCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGTATCTGTTAATGCTTGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR TCA 90 bp | TTTGGAAAATTTAGACACAGAAGGGAACTGTCTAGTTCAGTTTTCCCTTCAGAGCTTTGTACTGGTTACTaGACTTCTTGTTCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: FGKFRHRRELSSSVFPSELCTGY*TSCSHT Trigger: AGTATGTGAACAAGAAGTTCAGTAACCAGTACAAAG...CTCTGAAGGGAAAACTGAACTAGACAGTTCCCTTCTGTGTCTAAATTTTCCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGTTAAATTTTATTGGCATCACGTTCGTCTCTTTACAGAAGAACTCAGCATTGTGGCTTTGTACTaGTTACTGAACTTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLVKFYWHHVRLFTEELSIVALY*LLNFLF Trigger: GAACAAGAAGTTCAGTAACCAGTACAAAGCCACAAT...GCTGAGTTCTTCTGTAAAGAGACGAACGTGATGCCAATAAAATTTAACAAGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGAGGGCATTCCGAGCAATaGTCTGGAAGGCCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAICLPYTGPTRRAAAPGGHSEQ*SGRPAP Trigger: TGGAGCAGGCCTTCCAGACAATTGCTCGGAATGCCC...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGACAGCTGTCGAGGGTTTaGAAAGTGTTGGGGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SAICLPYTGPTRRAAAPGQLSRV*KVLGAV Trigger: GACTGCCCCCAACACTTTCAAAACCCTCGACAGCTG...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCAAGGACTTTCTGCGGAGGCCTaGGCCCGGTCATTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPAQNGAWAPAFPQDLQGLSAEA*ARSFLS Trigger: GGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAAG...TCCTTGAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGAAAGCCTGTGCCCTCTTaGTGGCCACTTGTCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SAICLPYTGPTRRAAAPGKPVPS*WPLVCF Trigger: AAAACAGACAAGTGGCCACAAAGAGGGCACAGGCTT...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGAAGGGTTTTGAAAGTGTaGGGGGCAGTCACATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SAICLPYTGPTRRAAAPGRVLKV*GAVTSN Trigger: GTTTGATGTGACTGCCCCCAACACTTTCAAAACCCT...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATCAGCTGTCGAGGGTTTaGAAAGTGTTGGGGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FHAHCTPEHPGSLPYACHQLSRV*KVLGAV Trigger: GACTGCCCCCAACACTTTCAAAACCCTCGACAGCTG...ATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGACCTCTTTGTGGCCACTaGTCTGTTTTCCAGGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SAICLPYTGPTRRAAAPGPLCGH*SVFQVN Trigger: ATTGACCTGGAAAACAGACAAGTGGCCACAAAGAGG...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TCTGCCATATGCCTGCCATACACAGGGCCCACGAGGCGGGCAGCTGCCCCAGGAGCTCCTATTGTGGCTTaGTACTGGTTACTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAICLPYTGPTRRAAAPGAPIVA*YWLLNF Trigger: GAAGTTCAGTAACCAGTACAAAGCCACAATAGGAGC...TCCTGGGGCAGCTGCCCGCCTCGTGGGCCCTGTGTATGGCAGGCATATGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | CCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCAGCTTTCTGCGGAGGCCTaGGCCCGGTCATTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVDKKSKLSMPTAPQSTQLSAEA*ARSFLS Trigger: GGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAAG...CTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCAAGGACCTCTTTGTGGCCACTaGTCTGTTTTCCAGGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QPAQNGAWAPAFPQDLQGPLCGH*SVFQVN Trigger: ATTGACCTGGAAAACAGACAAGTGGCCACAAAGAGG...TCCTTGAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | GCCTACACCCTAGAATGTAGACCTCTGAAGGGGAAGTGCTCCAGGAAGCAAGCCGGGCATTCCGAGCAATaGTCTGGAAGGCCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AYTLECRPLKGKCSRKQAGHSEQ*SGRPAP Trigger: TGGAGCAGGCCTTCCAGACAATTGCTCGGAATGCCC...GGCTTGCTTCCTGGAGCACTTCCCCTTCAGAGGTCTACATTCTAGGGTGTAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCTCCACCATCACCTCCTaGGTCAGAAAGTCCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LQWTKRVSFPCPLHPRAPSTITS*VRKSAP Trigger: AGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGGA...GGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | CAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCAGGGTTTTGAAAGTGTaGGGGGCAGTCACATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QNSLLRTEPGHQPSHRTFRVLKV*GAVTSN Trigger: GTTTGATGTGACTGCCCCCAACACTTTCAAAACCCT...GAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | AATCCAGACAGGGTTCAACCCTCCACCTTGCACGCCTGCGTTAGAGGACTTAAACTTTCTGCGGAGGCCTaGGCCCGGTCATTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NPDRVQPSTLHACVRGLKLSAEA*ARSFLS Trigger: GGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAAG...TTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAACCCTGTCTGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCCTTTCTGCGGAGGCCTaGGCCCGGTCATTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVRWSFFWQLDVRAHVLVLSAEA*ARSFLS Trigger: GGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAAG...GACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGAACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | CTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGACGCATATTGCAGCTGTCGAGGGTTTaGAAAGTGTTGGGGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LDVRAHVLVCLEEEGRILQLSRV*KVLGAV Trigger: GACTGCCCCCAACACTTTCAAAACCCTCGACAGCTG...CAATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | ACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCTAACCTACAGGTACCACAACCCAAGCCTGTGCCCTCTTaGTGGCCACTTGTCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TWVGGKGGGSANLQVPQPKPVPS*WPLVCF Trigger: AAAACAGACAAGTGGCCACAAAGAGGGCACAGGCTT...GGGTTGTGGTACCTGTAGGTTAGCAGACCCTCCTCCTTTCCCACCCACCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCGGGCATTCCGAGCAATaGTCTGGAAGGCCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVRWSFFWQLDVRAHVLVGHSEQ*SGRPAP Trigger: TGGAGCAGGCCTTCCAGACAATTGCTCGGAATGCCC...GACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGAACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGCTCAGAACGGAGCCTGGGCACCAGCCTTCCCACAGGACCTTCAAGGAGGTTCAGGGAATTCATaGTACAGTTCCACTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QPAQNGAWAPAFPQDLQGGSGNS*YSSTSV Trigger: AACAGAAGTGGAACTGTACAATGAATTCCCTGAACC...TCCTTGAAGGTCCTGTGGGAAGGCTGGTGCCCAGGCTCCGTTCTGAGCAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | GCTTTCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCTCATTCTTGTCCAGTTaGATGGGTTCAGGGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: AFHAHCTPEHPGSLPYACSFLSS*MGSGNS Trigger: TGAATTCCCTGAACCCATCAAACTGGACAAGAATGA...GCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | TGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGCTTTCTGCGGAGGCCTaGGCCCGGTCATTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WSFFWQLDVRAHVLVCLELSAEA*ARSFLS Trigger: GGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAAG...CTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | ACTTGGGTGGGTGGGAAAGGAGGAGGGTCTGCTAACCTACAGGTACCACAACCCAGGGTTTTGAAAGTGTaGGGGGCAGTCACATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TWVGGKGGGSANLQVPQPRVLKV*GAVTSN Trigger: GTTTGATGTGACTGCCCCCAACACTTTCAAAACCCT...GGGTTGTGGTACCTGTAGGTTAGCAGACCCTCCTCCTTTCCCACCCACCCAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | AATCCAGACAGGGTTCAACCCTCCACCTTGCACGCCTGCGTTAGAGGACTTAAACAGCTGTCGAGGGTTTaGAAAGTGTTGGGGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NPDRVQPSTLHACVRGLKQLSRV*KVLGAV Trigger: GACTGCCCCCAACACTTTCAAAACCCTCGACAGCTG...TTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAACCCTGTCTGGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | CTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCAAGCCTGTGCCCTCTTaGTGGCCACTTGTCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQWTKRVSFPCPLHPRAPKPVPS*WPLVCF Trigger: AAAACAGACAAGTGGCCACAAAGAGGGCACAGGCTT...GGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTGGGCATTCCGAGCAATaGTCTGGAAGGCCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGNCSVEFLLAAGCESSRGHSEQ*SGRPAP Trigger: TGGAGCAGGCCTTCCAGACAATTGCTCGGAATGCCC...ACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | ACAGGTACCACAACCCTGAAAGGAGCGCCTTCTAGAACAAAGGTAGAGTCACTGGGGCATTCCGAGCAATaGTCTGGAAGGCCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGTTTLKGAPSRTKVESLGHSEQ*SGRPAP Trigger: TGGAGCAGGCCTTCCAGACAATTGCTCGGAATGCCC...CAGTGACTCTACCTTTGTTCTAGAAGGCGCTCCTTTCAGGGTTGTGGTACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGTCCACCATCACCTCCTaGGTCAGAAAGTCCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WSFFWQLDVRAHVLVCLESTITS*VRKSAP Trigger: AGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGGA...CTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGGAGGGACGCATATTGAAGGCCTACGTGTGTGTTCTTGGTCTGTGAAGAAGCCTGTGCCCTCTTaGTGGCCACTTGTCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GGGGTHIEGLRVCSWSVKKPVPS*WPLVCF Trigger: AAAACAGACAAGTGGCCACAAAGAGGGCACAGGCTT...CTTCACAGACCAAGAACACACACGTAGGCCTTCAATATGCGTCCCTCCTCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGGAGGGACGCATATTGAAGGCCTACGTGTGTGTTCTTGGTCTGTGAAGTTGGCCCGGTCATTCTaGTCCAGTTTGATGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGGGTHIEGLRVCSWSVKLARSF*SSLMGS Trigger: TGAACCCATCAAACTGGACAAGAATGACCGGGCCAA...CTTCACAGACCAAGAACACACACGTAGGCCTTCAATATGCGTCCCTCCTCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGATTGGCCCGGTCATTCTaGTCCAGTTTGATGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FWQLDVRAHVLVCLEEEGLARSF*SSLMGS Trigger: TGAACCCATCAAACTGGACAAGAATGACCGGGCCAA...TCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | GCCTACACCCTAGAATGTAGACCTCTGAAGGGGAAGTGCTCCAGGAAGCAAGCCGCTCCTATTGTGGCTTaGTACTGGTTACTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: AYTLECRPLKGKCSRKQAAPIVA*YWLLNF Trigger: GAAGTTCAGTAACCAGTACAAAGCCACAATAGGAGC...GGCTTGCTTCCTGGAGCACTTCCCCTTCAGAGGTCTACATTCTAGGGTGTAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | GTGTATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATCCACCATCACCTCCTaGGTCAGAAAGTCCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VYVCVLGNCSVEFLLAAGSTITS*VRKSAP Trigger: AGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGGA...TCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | CAGTTCTCTCACTCTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCATCCACCATCACCTCCTaGGTCAGAAAGTCCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QFSHSPVDKKSKLSMPTASTITS*VRKSAP Trigger: AGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGGA...TGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAGAGTGAGAGAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | GCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGACGCATATTAGGGTTTTGAAAGTGTaGGGGGCAGTCACATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGCESSRSGLFGGGGTHIRVLKV*GAVTSN Trigger: GTTTGATGTGACTGCCCCCAACACTTTCAAAACCCT...AATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | TCCATGCCCACTGCACCCCAGAGCACCCAGGGTCTCTGCCATATGCCTGCCATATTTTCCAGGTCAATCTaGTTTCCCAACACAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SMPTAPQSTQGLCHMPAIFSRSI*FPNTTK Trigger: TTTTGTTGTGTTGGGAAACAAGATTGACCTGGAAAA...TATGGCAGGCATATGGCAGAGACCCTGGGTGCTCTGGGGTGCAGTGGGCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | CTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGACGCATATTGCCTCTTTGTGGCCACTaGTCTGTTTTCCAGGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LDVRAHVLVCLEEEGRILPLCGH*SVFQVN Trigger: ATTGACCTGGAAAACAGACAAGTGGCCACAAAGAGG...CAATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS TCA 90 bp | TGCAGCTTTCTGCGGAGGCCTTGGCCCGGTCATTCTTGTCCAGTTTaGTGGGTTCAGGGAATTCATTGTACAGTTCCACTTCTGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CSFLRRPWPGHSCPV*WVQGIHCTVPLLFP Trigger: AGGAAACAGAAGTGGAACTGTACAATGAATTCCCTGAACCCATCAAACTGGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAAGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | CTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGACGCATATTGGCTCCTATTGTGGCTTaGTACTGGTTACTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDVRAHVLVCLEEEGRILAPIVA*YWLLNF Trigger: GAAGTTCAGTAACCAGTACAAAGCCACAATAGGAGC...CAATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | GGAGGAGGAGGGACGCATATTGAAGGCCTACGTGTGTGTTCTTGGTCTGTGAAGGCTCCTATTGTGGCTTaGTACTGGTTACTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGGGTHIEGLRVCSWSVKAPIVA*YWLLNF Trigger: GAAGTTCAGTAACCAGTACAAAGCCACAATAGGAGC...CTTCACAGACCAAGAACACACACGTAGGCCTTCAATATGCGTCCCTCCTCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | ACAGGTACCACAACCCTGAAAGGAGCGCCTTCTAGAACAAAGGTAGAGTCACTGAAGCCTGTGCCCTCTTaGTGGCCACTTGTCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TGTTTLKGAPSRTKVESLKPVPS*WPLVCF Trigger: AAAACAGACAAGTGGCCACAAAGAGGGCACAGGCTT...CAGTGACTCTACCTTTGTTCTAGAAGGCGCTCCTTTCAGGGTTGTGGTACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | CCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCAGGGTTCAGGGAATTCATaGTACAGTTCCACTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVDKKSKLSMPTAPQSTQGSGNS*YSSTSV Trigger: AACAGAAGTGGAACTGTACAATGAATTCCCTGAACC...CTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | GCCTACACCCTAGAATGTAGACCTCTGAAGGGGAAGTGCTCCAGGAAGCAAGCCGGTTCAGGGAATTCATaGTACAGTTCCACTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AYTLECRPLKGKCSRKQAGSGNS*YSSTSV Trigger: AACAGAAGTGGAACTGTACAATGAATTCCCTGAACC...GGCTTGCTTCCTGGAGCACTTCCCCTTCAGAGGTCTACATTCTAGGGTGTAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | CAAGCATTAACAGATACATACAAAACAGCCTGCTCAGAACGGAGCCTGGGCACCTTGGCCCGGTCATTCTaGTCCAGTTTGATGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QALTDTYKTACSERSLGTLARSF*SSLMGS Trigger: TGAACCCATCAAACTGGACAAGAATGACCGGGCCAA...GGTGCCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGTATCTGTTAATGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | CTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCTGGTTACTGAACTTCTaGTTCACATACTGGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LQWTKRVSFPCPLHPRAPWLLNF*FTYWFM Trigger: CATGAACCAGTATGTGAACAAGAAGTTCAGTAACCA...GGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | TGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGCCTCTTTGTGGCCACTaGTCTGTTTTCCAGGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: WSFFWQLDVRAHVLVCLEPLCGH*SVFQVN Trigger: ATTGACCTGGAAAACAGACAAGTGGCCACAAAGAGG...CTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | TTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGAGGTTCAGGGAATTCATaGTACAGTTCCACTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FWQLDVRAHVLVCLEEEGGSGNS*YSSTSV Trigger: AACAGAAGTGGAACTGTACAATGAATTCCCTGAACC...TCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | GCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGACGCATATTTCATTCTTGTCCAGTTaGATGGGTTCAGGGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGCESSRSGLFGGGGTHISFLSS*MGSGNS Trigger: TGAATTCCCTGAACCCATCAAACTGGACAAGAATGA...AATATGCGTCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTCTCACTCTCCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCATTGGCCCGGTCATTCTaGTCCAGTTTGATGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QFSHSPVDKKSKLSMPTALARSF*SSLMGS Trigger: TGAACCCATCAAACTGGACAAGAATGACCGGGCCAA...TGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGGAGAGTGAGAGAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGAGGAGGGATGGTTACTGAACTTCTaGTTCACATACTGGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: FWQLDVRAHVLVCLEEEGWLLNF*FTYWFM Trigger: CATGAACCAGTATGTGAACAAGAAGTTCAGTAACCA...TCCCTCCTCCTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGAGGAGGGACGCATATTGAAGGCCTACGTGTGTGTTCTTGGTCTGTGAAGTGGTTACTGAACTTCTaGTTCACATACTGGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: GGGGTHIEGLRVCSWSVKWLLNF*FTYWFM Trigger: CATGAACCAGTATGTGAACAAGAAGTTCAGTAACCA...CTTCACAGACCAAGAACACACACGTAGGCCTTCAATATGCGTCCCTCCTCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | TGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGTTTGGAGGCTCCTATTGTGGCTTaGTACTGGTTACTGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: WSFFWQLDVRAHVLVCLEAPIVA*YWLLNF Trigger: GAAGTTCAGTAACCAGTACAAAGCCACAATAGGAGC...CTCCAAACAGACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | CCAGTGGACAAAAAGAGTAAGCTTTCCATGCCCACTGCACCCCAGAGCACCCAGTTTTCCAGGTCAATCTaGTTTCCCAACACAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVDKKSKLSMPTAPQSTQFSRSI*FPNTTK Trigger: TTTTGTTGTGTTGGGAAACAAGATTGACCTGGAAAA...CTGGGTGCTCTGGGGTGCAGTGGGCATGGAAAGCTTACTCTTTTTGTCCACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | GTAACAAGCATTAACAGATACATACAAAACAGCCTGCTCAGAACGGAGCCTGGGTTGGCCCGGTCATTCTaGTCCAGTTTGATGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTSINRYIQNSLLRTEPGLARSF*SSLMGS Trigger: TGAACCCATCAAACTGGACAAGAATGACCGGGCCAA...CCCAGGCTCCGTTCTGAGCAGGCTGTTTTGTATGTATCTGTTAATGCTTGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATGTGAGAGCTCACGTTCTGGTCTGGTTACTGAACTTCTaGTTCACATACTGGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TVRWSFFWQLDVRAHVLVWLLNF*FTYWFM Trigger: CATGAACCAGTATGTGAACAAGAAGTTCAGTAACCA...GACCAGAACGTGAGCTCTCACATCCAGCTGCCAAAAGAAACTCCACCGAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | ATAATTCTTGTGTCTACTGTACAGAATACTGCCGCTAGCTGGACTTCCAAACTTTCCACCATCACCTCCTaGGTCAGAAAGTCCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IILVSTVQNTAASWTSKLSTITS*VRKSAP Trigger: AGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGGA...AAGTTTGGAAGTCCAGCTAGCGGCAGTATTCTGTACAGTAGACACAAGAATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
||
| CDS-3UTR CAA 90 bp | GCTAGCTGGACTTCCAAACTTGAGTCTCTAACACTCTGTAATCCAGACAGGGTTAGGGTTTTGAAAGTGTaGGGGGCAGTCACATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASWTSKLESLTLCNPDRVRVLKV*GAVTSN Trigger: GTTTGATGTGACTGCCCCCAACACTTTCAAAACCCT...AACCCTGTCTGGATTACAGAGTGTTAGAGACTCAAGTTTGGAAGTCCAGCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | ATCCAGACAGGGTTCAACCCTCCACCTTGCACGCCTGCGTTAGAGGACTTAAACTTTTCCAGGTCAATCTaGTTTCCCAACACAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: IQTGFNPPPCTPALEDLNFSRSI*FPNTTK Trigger: TTTTGTTGTGTTGGGAAACAAGATTGACCTGGAAAA...GTTTAAGTCCTCTAACGCAGGCGTGCAAGGTGGAGGGTTGAACCCTGTCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | CAGGCACAGGCTGGAGTTTGCTTGCTGTGTGTGTGTTGTGTGTATGTGTTTTTGGGTTCAGGGAATTCATaGTACAGTTCCACTTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: QAQAGVCLLCVCCVYVFLGSGNS*YSSTSV Trigger: AACAGAAGTGGAACTGTACAATGAATTCCCTGAACC...CAAAAACACATACACACAACACACACACAGCAAGCAAACTCCAGCCTGTGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | GTGTATGTGTGTGTGTTGGGTAACTGTTCGGTGGAGTTTCTTTTGGCAGCTGGATCATTCTTGTCCAGTTaGATGGGTTCAGGGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: VYVCVLGNCSVEFLLAAGSFLSS*MGSGNS Trigger: TGAATTCCCTGAACCCATCAAACTGGACAAGAATGA...TCCAGCTGCCAAAAGAAACTCCACCGAACAGTTACCCAACACACACACATACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | CAGGCACAGGCTGGAGTTTGCTTGCTGTGTGTGTGTTGTGTGTATGTGTTTTTGTCATTCTTGTCCAGTTaGATGGGTTCAGGGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: QAQAGVCLLCVCCVYVFLSFLSS*MGSGNS Trigger: TGAATTCCCTGAACCCATCAAACTGGACAAGAATGA...CAAAAACACATACACACAACACACACACAGCAAGCAAACTCCAGCCTGTGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | TTTGGAAAATTTAGACACAGAAGGGAACTGTCTAGTTCAGTTTTCCCTTCAGAGCCTCTTTGTGGCCACTaGTCTGTTTTCCAGGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: FGKFRHRRELSSSVFPSEPLCGH*SVFQVN Trigger: ATTGACCTGGAAAACAGACAAGTGGCCACAAAGAGG...CTCTGAAGGGAAAACTGAACTAGACAGTTCCCTTCTGTGTCTAAATTTTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | ATAATTCTTGTGTCTACTGTACAGAATACTGCCGCTAGCTGGACTTCCAAACTTTTTTCCAGGTCAATCTaGTTTCCCAACACAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: IILVSTVQNTAASWTSKLFSRSI*FPNTTK Trigger: TTTTGTTGTGTTGGGAAACAAGATTGACCTGGAAAA...AAGTTTGGAAGTCCAGCTAGCGGCAGTATTCTGTACAGTAGACACAAGAATTAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | GTTCTCCTTTCCTCTTTGAGTAGGATAGTGACAAAAGGGCATCATAAAGTGTTGTTTTCCAGGTCAATCTaGTTTCCCAACACAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: VLLSSLSRIVTKGHHKVLFSRSI*FPNTTK Trigger: TTTTGTTGTGTTGGGAAACAAGATTGACCTGGAAAA...CAACACTTTATGATGCCCTTTTGTCACTATCCTACTCAAAGAGGAAAGGAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS-3UTR CAA 90 bp | GTTCTTGTTAAATTTTATTGGCATCACGTTCGTCTCTTTACAGAAGAACTCAGCTGGTTACTGAACTTCTaGTTCACATACTGGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: VLVKFYWHHVRLFTEELSWLLNF*FTYWFM Trigger: CATGAACCAGTATGTGAACAAGAAGTTCAGTAACCA...GCTGAGTTCTTCTGTAAAGAGACGAACGTGATGCCAATAAAATTTAACAAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113600.10 |
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| CDS CAA 90 bp | GGGCTGGCCTGGATGAGAAACTCGTCTCTCCAGCTGTCGAGGGTTTaGAAAGTGTTGGGGGCAGTCACATCAAACACCAGAACACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: GLAWMRNSSLQLSRV*KVLGAVTSNTRTQQ Trigger: TTGCTGTGTTCTGGTGTTTGATGTGACTGCCCCCAACACTTTCAAAACCCTCGACAGCTGGAGAGACGAGTTTCTCATCCAGGCCAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS CAA 90 bp | GCCTGTGCCCTCTTTGTGGCCACTTGTCTGTTTTCCAGGTCAATCTaGTTTCCCAACACAACAAAAGGGAAGTTCTCGGGATCCCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: ACALFVATCLFSRSI*FPNTTKGKFSGSRG Trigger: CCCCCGGGATCCCGAGAACTTCCCTTTTGTTGTGTTGGGAAACAAGATTGACCTGGAAAACAGACAAGTGGCCACAAAGAGGGCACAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS CAA 72 bp | CTGCAGCTTTCTGCGGAGGCCTTGGCCCGGTCATTCTaGTCCAGTTTGATGGGTTCAGGGAATTCATTGTAC | + |
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Preference number: 6 (lower is better) Translates to: LQLSAEALARSF*SSLMGSGNSLY Trigger: GTACAATGAATTCCCTGAACCCATCAAACTGGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAAGCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS CAA 90 bp | CTGCAGCTTTCTGCGGAGGCCTTGGCCCGGTCATTCTTGTCCAGTTaGATGGGTTCAGGGAATTCATTGTACAGTTCCACTTCTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LQLSAEALARSFLSS*MGSGNSLYSSTSVS Trigger: GGAAACAGAAGTGGAACTGTACAATGAATTCCCTGAACCCATCAAACTGGACAAGAATGACCGGGCCAAGGCCTCCGCAGAAAGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS TCA 72 bp | CTGCGGAGGCCTTGGCCCGGTCATTCTTGTCCAGTTTaGTGGGTTCAGGGAATTCATTGTACAGTTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: LRRPWPGHSCPV*WVQGIHCTVPL Trigger: AAGTGGAACTGTACAATGAATTCCCTGAACCCATCAAACTGGACAAGAATGACCGGGCCAAGGCCTCCGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS CCA 72 bp | TCTGTTTCCTGTTTAAGGGCATTCCGAGCAATTGTCTaGAAGGCCTGCTCCACATTGATGGCCTCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SVSCLRAFRAIV*KACSTLMASLA Trigger: TGCCAAGGAGGCCATCAATGTGGAGCAGGCCTTCCAGACAATTGCTCGGAATGCCCTTAAACAGGAAACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS CAA 72 bp | TCTGCGGAGGCCTTGGCCCGGTCATTCTTGTCCAGTTaGATGGGTTCAGGGAATTCATTGTACAGTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: SAEALARSFLSS*MGSGNSLYSST Trigger: AGTGGAACTGTACAATGAATTCCCTGAACCCATCAAACTGGACAAGAATGACCGGGCCAAGGCCTCCGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS CAA 90 bp | TCCCAGATCTGCATGGTAACAAGTCTGTCGTCCACCATCACCTCCTaGGTCAGAAAGTCCGCTCCTATTGTGGCTTTGTACTGGTTACTG | + |
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Preference number: 6 (lower is better) Translates to: SQICMVTSLSSTITS*VRKSAPIVALYWLL Trigger: CAGTAACCAGTACAAAGCCACAATAGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGGACGACAGACTTGTTACCATGCAGATCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 ENSMUST00000203674.3 ENSMUST00000204126.2 |
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| CDS CAA 90 bp | TGGATGAGAAACTCGTCTCTCCAGCTGTCGAGGGTTTTGAAAGTGTaGGGGGCAGTCACATCAAACACCAGAACACAGCAATCTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: WMRNSSLQLSRVLKV*GAVTSNTRTQQSAP Trigger: AGGTGCAGATTGCTGTGTTCTGGTGTTTGATGTGACTGCCCCCAACACTTTCAAAACCCTCGACAGCTGGAGAGACGAGTTTCTCATCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS CAA 72 bp | TGCATGGTAACAAGTCTGTCGTCCACCATCACCTCCTaGGTCAGAAAGTCCGCTCCTATTGTGGCTTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: CMVTSLSSTITS*VRKSAPIVALY Trigger: GTACAAAGCCACAATAGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGGACGACAGACTTGTTACCATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 ENSMUST00000203674.3 ENSMUST00000204126.2 |
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| CDS CAA 72 bp | AACTCGTCTCTCCAGCTGTCGAGGGTTTTGAAAGTGTaGGGGGCAGTCACATCAAACACCAGAACACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: NSSLQLSRVLKV*GAVTSNTRTQQ Trigger: TTGCTGTGTTCTGGTGTTTGATGTGACTGCCCCCAACACTTTCAAAACCCTCGACAGCTGGAGAGACGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS CAA 72 bp | TGGATGAGAAACTCGTCTCTCCAGCTGTCGAGGGTTTaGAAAGTGTTGGGGGCAGTCACATCAAACACCAGA | + |
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Preference number: 6 (lower is better) Translates to: WMRNSSLQLSRV*KVLGAVTSNTR Trigger: TCTGGTGTTTGATGTGACTGCCCCCAACACTTTCAAAACCCTCGACAGCTGGAGAGACGAGTTTCTCATCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS CAA 90 bp | TTGGCCCGGTCATTCTTGTCCAGTTTGATGGGTTCAGGGAATTCATaGTACAGTTCCACTTCTGTTTCCTGTTTAAGGGCATTCCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LARSFLSSLMGSGNS*YSSTSVSCLRAFRA Trigger: TGCTCGGAATGCCCTTAAACAGGAAACAGAAGTGGAACTGTACAATGAATTCCCTGAACCCATCAAACTGGACAAGAATGACCGGGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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| CDS CAA 90 bp | TCCACCATCACCTCCTTGGTCAGAAAGTCCGCTCCTATTGTGGCTTaGTACTGGTTACTGAACTTCTTGTTCACATACTGGTTCATGAGA | + |
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Preference number: 6 (lower is better) Translates to: STITSLVRKSAPIVA*YWLLNFLFTYWFMR Trigger: TCTCATGAACCAGTATGTGAACAAGAAGTTCAGTAACCAGTACAAAGCCACAATAGGAGCGGACTTTCTGACCAAGGAGGTGATGGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 ENSMUST00000203674.3 ENSMUST00000204126.2 |
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| CDS CAA 72 bp | ACCTCCTTGGTCAGAAAGTCCGCTCCTATTGTGGCTTaGTACTGGTTACTGAACTTCTTGTTCACATACTGG | + |
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Preference number: 6 (lower is better) Translates to: TSLVRKSAPIVA*YWLLNFLFTYW Trigger: CCAGTATGTGAACAAGAAGTTCAGTAACCAGTACAAAGCCACAATAGGAGCGGACTTTCTGACCAAGGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 ENSMUST00000203674.3 ENSMUST00000204126.2 |
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| CDS CAA 72 bp | CTCTTTGTGGCCACTTGTCTGTTTTCCAGGTCAATCTaGTTTCCCAACACAACAAAAGGGAAGTTCTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: LFVATCLFSRSI*FPNTTKGKFSG Trigger: TCCCGAGAACTTCCCTTTTGTTGTGTTGGGAAACAAGATTGACCTGGAAAACAGACAAGTGGCCACAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000095048.6 ENSMUST00000113596.8 ENSMUST00000113597.8 ENSMUST00000113598.8 ENSMUST00000113600.10 |
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