Pregenerated sensors for RAB6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032549Ensembl transcript IDs: ENSMUST00000035155.8
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTATGCTTTCTTCCAACAAGCACCACATGGGTGGGGTGTCCACAGTaGGGGACACTGGCCCACGACGGCATGCACACCTGTGCACACAGG | + |
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Preference number: 1 (lower is better) Translates to: VCFLPTSTTWVGCPQ*GTLAHDGMHTCAHR Trigger: CCTGTGTGCACAGGTGTGCATGCCGTCGTGGGCCAGTGTCCCCCACTGTGGACACCCCACCCATGTGGTGCTTGTTGGAAGAAAGCATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 90 bp | TTTTCAGGGAAGGAGAAGAGGCGGAAGCAGCCAAGGAGCTGCTGCTaGATCTACAGTCCACGGGCCTTCATCTCCTCTCAGGGGCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: FSGKEKRRKQPRSCC*IYSPRAFISSQGPA Trigger: GGCAGGCCCCTGAGAGGAGATGAAGGCCCGTGGACTGTAGATTCAGCAGCAGCTCCTTGGCTGCTTCCGCCTCTTCTCCTTCCCTGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 90 bp | GCTCTGCCAGAGGCCACCAGCAAAGCCCCTCACTGCCAACCAGGCTaGTGTCACCACGGGCTAAGTATGCTTTCTTCCAACAAGCACCAC | + |
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Preference number: 1 (lower is better) Translates to: ALPEATSKAPHCQPG*CHHGLSMLSSNKHH Trigger: GTGGTGCTTGTTGGAAGAAAGCATACTTAGCCCGTGGTGACAGCAGCCTGGTTGGCAGTGAGGGGCTTTGCTGGTGGCCTCTGGCAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 90 bp | CAAGTTGCAGTACCCTGGGGCAGCAGCCTTCTGGAAACCCCACAGTaGCTCCAAGATGCGTGCAGTGCAGCTGCCAACACTCCCAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: QVAVPWGSSLLETPQ*LQDACSAAANTPKG Trigger: ACCTTTGGGAGTGTTGGCAGCTGCACTGCACGCATCTTGGAGTCACTGTGGGGTTTCCAGAAGGCTGCTGCCCCAGGGTACTGCAACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 90 bp | ATCATCAGAACCGGCTTTGACACAGTCTCCCAGGATGGAGTCGCATaGCGGGCCCACTCACAGAATCAGCCCTGCCACACAGGCTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: IIRTGFDTVSQDGVA*RAHSQNQPCHTGCH Trigger: ATGGCAGCCTGTGTGGCAGGGCTGATTCTGTGAGTGGGCCCGTCATGCGACTCCATCCTGGGAGACTGTGTCAAAGCCGGTTCTGATGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 90 bp | CGTACATTGGTCCTTGCCTTCTGGAGGAGGTACCCAGGGCGGTCCTaGTTCCTCTCTTCATCATCAGAACCGGCTTTGACACAGTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: RTLVLAFWRRYPGRS*FLSSSSEPALTQSP Trigger: GGGAGACTGTGTCAAAGCCGGTTCTGATGATGAAGAGAGGAAGCAGGACCGCCCTGGGTACCTCCTCCAGAAGGCAAGGACCAATGTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 90 bp | ACAATGGCAGGCTGGCCTTCGTTGCTATGGAGGCTTCCTGCCTCCTaGAGGGCCCATCTGAACTCCCGCTGCGTGGATTTCCTGATAATT | + |
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Preference number: 1 (lower is better) Translates to: TMAGWPSLLWRLPAS*RAHLNSRCVDFLII Trigger: AATTATCAGGAAATCCACGCAGCGGGAGTTCAGATGGGCCCTTCAGGAGGCAGGAAGCCTCCATAGCAACGAAGGCCAGCCTGCCATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CCA 90 bp | GTTTGGCTCCCAGTGCTGTGGCAAGGTGATGGTGCCTCCCATTCTTaGGGGAGAGGTAGTTTAGAAACTAGTGAGCATCGAGCCCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: VWLPVLWQGDGASHS*GRGSLETSEHRALS Trigger: GCTCAGGGCTCGATGCTCACTAGTTTCTAAACTACCTCTCCCCCAAGAATGGGAGGCACCATCACCTTGCCACAGCACTGGGAGCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 90 bp | GGCCATGCCCATCTGCCAGGCCAGGCAGTGTCCAGAGAGAGGAACTaGATTACGACATTGGGATCATGCCCTAAGAGGAACCCTCCATTT | + |
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Preference number: 1 (lower is better) Translates to: GHAHLPGQAVSRERN*ITTLGSCPKRNPPF Trigger: AAATGGAGGGTTCCTCTTAGGGCATGATCCCAATGTCGTAATTCAGTTCCTCTCTCTGGACACTGCCTGGCCTGGCAGATGGGCATGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 90 bp | ACCCTGGGGCAGCAGCCTTCTGGAAACCCCACAGTGACTCCAAGATaGGTGCAGTGCAGCTGCCAACACTCCCAAAGGTATTCATACAAA | + |
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Preference number: 1 (lower is better) Translates to: TLGQQPSGNPTVTPR*VQCSCQHSQRYSYK Trigger: TTTGTATGAATACCTTTGGGAGTGTTGGCAGCTGCACTGCACGCATCTTGGAGTCACTGTGGGGTTTCCAGAAGGCTGCTGCCCCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CCA 90 bp | CACACATTGAGTTGGCGAGTCAGCCTAACCATGTGTGTCAATGGTTaGGCCAGTAGATTACACACTGCCTCAGCCCTCAGCTGCCAAGCG | + |
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Preference number: 1 (lower is better) Translates to: HTLSWRVSLTMCVNG*ASRLHTASALSCQA Trigger: CGCTTGGCAGCTGAGGGCTGAGGCAGTGTGTAATCTACTGGCCCAACCATTGACACACATGGTTAGGCTGACTCGCCAACTCAATGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 90 bp | ATTAGAGTCACTGCCCCAGGCCTGCCCAAAGGCAGACAGGGGCAGTaGGTCCGGGAGCGTTTAGAATATAAGAGCTATTCTGCTTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: IRVTAPGLPKGRQGQ*VRERLEYKSYSALR Trigger: TCTCAAAGCAGAATAGCTCTTATATTCTAAACGCTCCCGGACTCACTGCCCCTGTCTGCCTTTGGGCAGGCCTGGGGCAGTGACTCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 90 bp | AAGCCCAGGTCCACTACAGTTAGTTCTGTTGGGGCCTGGCTGCCTTaGTTGCCTTTTGGGAAGGAGATGGGTAGCTTGGCTGAGGAAATA | + |
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Preference number: 1 (lower is better) Translates to: KPRSTTVSSVGAWLP*LPFGKEMGSLAEEI Trigger: TATTTCCTCAGCCAAGCTACCCATCTCCTTCCCAAAAGGCAATCAAGGCAGCCAGGCCCCAACAGAACTAACTGTAGTGGACCTGGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 90 bp | AAAACTAAACACGTGACGTTTCGATTATGCTCGTACATTGGTCCTTaGCTTCTGGAGGAGGTACCCAGGGCGGTCCTGCTTCCTCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: KTKHVTFRLCSYIGP*LLEEVPRAVLLPLF Trigger: GAAGAGAGGAAGCAGGACCGCCCTGGGTACCTCCTCCAGAAGGCAAGGACCAATGTACGAGCATAATCGAAACGTCACGTGTTTAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 90 bp | GCCCATCTGAACTCCCGCTGCGTGGATTTCCTGATAATTATACCCTaGAGAGAGTATCAATCAGACAGGGTCTGGAGTCCAAGGAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: AHLNSRCVDFLIIIP*REYQSDRVWSPRSV Trigger: CACACTCCTTGGACTCCAGACCCTGTCTGATTGATACTCTCTGCAGGGTATAATTATCAGGAAATCCACGCAGCGGGAGTTCAGATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CCA 90 bp | GGTCAGCAACGGATCAAGAATGCCAACACTAGTTCTGATCCTCTCTaGCTTGCAGGTGACCTTTTCTGTTCTGGTTCTCCCACCCGTGAA | + |
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Preference number: 1 (lower is better) Translates to: GQQRIKNANTSSDPL*LAGDLFCSGSPTRE Trigger: TTCACGGGTGGGAGAACCAGAACAGAAAAGGTCACCTGCAAGCCAGAGAGGATCAGAACTAGTGTTGGCATTCTTGATCCGTTGCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 90 bp | ATAGAAATGCCGCCCTCTGCTCCTCACTTTAAAGGACAGGTGAGGTaGGAAGTCAACACATCACAATGGCAGGCTGGCCTTCGTTGCTAT | + |
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Preference number: 1 (lower is better) Translates to: IEMPPSAPHFKGQVR*EVNTSQWQAGLRCY Trigger: ATAGCAACGAAGGCCAGCCTGCCATTGTGATGTGTTGACTTCTCACCTCACCTGTCCTTTAAAGTGAGGAGCAGAGGGCGGCATTTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 90 bp | TCTCTTTCAAGTCTCTTAAAGAAAAGGAGGAGGGCCATGCCCATCTaGCAGGCCAGGCAGTGTCCAGAGAGAGGAACTGAATTACGACAT | + |
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Preference number: 1 (lower is better) Translates to: SLSSLLKKRRRAMPI*QARQCPERGTELRH Trigger: ATGTCGTAATTCAGTTCCTCTCTCTGGACACTGCCTGGCCTGGCAGATGGGCATGGCCCTCCTCCTTTTCTTTAAGAGACTTGAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 90 bp | ACGGGCCCACTCACAGAATCAGCCCTGCCACACAGGCTGCCATTTTaGACTCATTCTTTGAGAGATTCCATAATTCATCCCAACCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: TGPLTESALPHRLPF*THSLRDSIIHPNLL Trigger: AAGGAGGTTGGGATGAATTATGGAATCTCTCAAAGAATGAGTTCAAAATGGCAGCCTGTGTGGCAGGGCTGATTCTGTGAGTGGGCCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 90 bp | CCTTCTGGAAACCCCACAGTGACTCCAAGATGCGTGCAGTGCAGCTaGCAACACTCCCAAAGGTATTCATACAAAGATTTCAAACGTACC | + |
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Preference number: 1 (lower is better) Translates to: PSGNPTVTPRCVQCS*QHSQRYSYKDFKRT Trigger: GGTACGTTTGAAATCTTTGTATGAATACCTTTGGGAGTGTTGGCAGCTGCACTGCACGCATCTTGGAGTCACTGTGGGGTTTCCAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 90 bp | CAGCAGCCTTCTGGAAACCCCACAGTGACTCCAAGATGCGTGCAGTaGAGCTGCCAACACTCCCAAAGGTATTCATACAAAGATTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: QQPSGNPTVTPRCVQ*SCQHSQRYSYKDFK Trigger: TTTGAAATCTTTGTATGAATACCTTTGGGAGTGTTGGCAGCTGCACTGCACGCATCTTGGAGTCACTGTGGGGTTTCCAGAAGGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 90 bp | CCCAAAGGTATTCATACAAAGATTTCAAACGTACCACGCCAGAGGTaGGGACACATCAAGGAATCAGCTTTTCCAGAACAACGTTCGGCA | + |
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Preference number: 1 (lower is better) Translates to: PKGIHTKISNVPRQR*GHIKESAFPEQRSA Trigger: TGCCGAACGTTGTTCTGGAAAAGCTGATTCCTTGATGTGTCCTCACCTCTGGCGTGGTACGTTTGAAATCTTTGTATGAATACCTTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CCA 90 bp | GCTGAGTCTTTTCCACATATTACACAGTTGAATGTAAAGTCAATATaGCCACTGTGCCTTCTGAGCCCAGTACAGATAGAAATGCCGCCC | + |
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Preference number: 1 (lower is better) Translates to: AESFPHITQLNVKSI*PLCLLSPVQIEMPP Trigger: GGGCGGCATTTCTATCTGTACTGGGCTCAGAAGGCACAGTGGCCATATTGACTTTACATTCAACTGTGTAATATGTGGAAAAGACTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 90 bp | ATTATGTACACACATATAAAAACTAAACACGTGACGTTTCGATTATaGTCGTACATTGGTCCTTGCCTTCTGGAGGAGGTACCCAGGGCG | + |
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Preference number: 1 (lower is better) Translates to: IMYTHIKTKHVTFRL*SYIGPCLLEEVPRA Trigger: CGCCCTGGGTACCTCCTCCAGAAGGCAAGGACCAATGTACGAGCATAATCGAAACGTCACGTGTTTAGTTTTTATATGTGTGTACATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGGCTTCCTGCCTCCTGAAGGGCCCATCTGAACTCCCGCTGCGTGGATTTCTGTCAGTGGGGCTCTaGCAGAGGCCACCAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: MEASCLLKGPSELPLRGFLSVGL*QRPPAK Trigger: CTTTGCTGGTGGCCTCTGGCAGAGCCCCACTGACAG...AAATCCACGCAGCGGGAGTTCAGATGGGCCCTTCAGGAGGCAGGAAGCCTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCTGAGCATTTGACACAGACTCCTGCTGGCTGGCTCTTGGGTAGCTCTAACACAAGTGAGTGGCGCTaGGGAAGCCGAGTGGGCGGT | + |
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Preference number: 2 (lower is better) Translates to: SPEHLTQTPAGWLLGSSNTSEWR*GSRVGG Trigger: ACCGCCCACTCGGCTTCCTCAGCGCCACTCACTTGT...GTTAGAGCTACCCAAGAGCCAGCCAGCAGGAGTCTGTGTCAAATGCTCAGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAGGAAGGCAGGGCTCCTTAGGCCAGATCGACCAGAAATGGCATCTGCCATGCTCCTCTCAGGGGCCTaGCAATGTGTCCCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: ARKAGLLRPDRPEMASAMLLSGA*QCVPLC Trigger: GCAGAGTGGGACACATTGGCAGGCCCCTGAGAGGAG...CATGGCAGATGCCATTTCTGGTCGATCTGGCCTAAGGAGCCCTGCCTTCCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTGAGCATTTGACACAGACTCCTGCTGGCTGGCTCTTGGGTAGCTCTAACAGAGAGTGCTGTCAGTaGGGCTCTGCCAGAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SPEHLTQTPAGWLLGSSNRECCQ*GSARGH Trigger: GTGGCCTCTGGCAGAGCCCCACTGACAGCACTCTCT...GTTAGAGCTACCCAAGAGCCAGCCAGCAGGAGTCTGTGTCAAATGCTCAGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGCCTTCTGGAAACCCCACAGTGACTCCAAGATGCGTGCAGTGCAGCTGCGATTTGACTGTGGAGTaGGGGTTTGGTTGGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QQPSGNPTVTPRCVQCSCDLTVE*GFGWFG Trigger: CCCAAACCAACCAAACCCGCACTCCACAGTCAAATC...GCAGCTGCACTGCACGCATCTTGGAGTCACTGTGGGGTTTCCAGAAGGCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTCTGGAGGAGGTACCCAGGGCGGTCCTGCTTCCTCTCTTCATCATCAGAAAGGGTCTGACAACATaGAGTGTCCGGAGTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: CLLEEVPRAVLLPLFIIRKGLTT*SVRSHG Trigger: GCCATGACTCCGGACACTCCATGTTGTCAGACCCTT...TCTGATGATGAAGAGAGGAAGCAGGACCGCCCTGGGTACCTCCTCCAGAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CAA 90 bp | GCATCGAGCCCTGAGCATTTGACACAGACTCCTGCTGGCTGGCTCTaGGGTAGCTCTAACTTAGCTCTCTTCAGCCACTTTGCTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: ASSPEHLTQTPAGWL*GSSNLALFSHFADS Trigger: GCTGTCAGCAAAGTGGCTGAAGAGAGCTAAGTTAGAGCTACCCAAGAGCCAGCCAGCAGGAGTCTGTGTCAAATGCTCAGGGCTCGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATAAGGCCAGGGCACCTCTGGAGTGGGGGAGCAATGGGGCAGAACCCTAATTGCCCACCAGCAGTCTaGAAGAAGAGCCAATGCTAT | + |
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Preference number: 2 (lower is better) Translates to: EIRPGHLWSGGAMGQNPNCPPAV*KKSQCY Trigger: ATAGCATTGGCTCTTCTTTCAGACTGCTGGTGGGCA...ATTAGGGTTCTGCCCCATTGCTCCCCCACTCCAGAGGTGCCCTGGCCTTATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAGGAAGGCAGGGCTCCTTAGGCCAGATCGACCAGAAATGGCATCTGCCATGTTCCTCAATGGTAGTTaGAGTGATGGCAGGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ARKAGLLRPDRPEMASAMFLNGS*SDGRCP Trigger: AGGGCACCTGCCATCACTGCAACTACCATTGAGGAA...CATGGCAGATGCCATTTCTGGTCGATCTGGCCTAAGGAGCCCTGCCTTCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGGCTTCCTGCCTCCTGAAGGGCCCATCTGAACTCCCGCTGCGTGGATTTACCAGAAATGGCATCTaGCATGGTACCTGCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: MEASCLLKGPSELPLRGFTRNGI*HGTCCF Trigger: GAAACAGCAGGTACCATGGCAGATGCCATTTCTGGT...AAATCCACGCAGCGGGAGTTCAGATGGGCCCTTCAGGAGGCAGGAAGCCTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGGCTTCCTGCCTCCTGAAGGGCCCATCTGAACTCCCGCTGCGTGGATTTAGTTCTGATCCTCTCTaGCTTGCAGGTGACCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: MEASCLLKGPSELPLRGFSSDPL*LAGDLF Trigger: GAAAAGGTCACCTGCAAGCCAGAGAGGATCAGAACT...AAATCCACGCAGCGGGAGTTCAGATGGGCCCTTCAGGAGGCAGGAAGCCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAGGAAGGCAGGGCTCCTTAGGCCAGATCGACCAGAAATGGCATCTGCCATGCCCTGCCACACAGGCTaGCATTTTGAACTCATTCTT | + |
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Preference number: 2 (lower is better) Translates to: ARKAGLLRPDRPEMASAMPCHTG*HFELIL Trigger: AAGAATGAGTTCAAAATGGCAGCCTGTGTGGCAGGG...CATGGCAGATGCCATTTCTGGTCGATCTGGCCTAAGGAGCCCTGCCTTCCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTGAGCATTTGACACAGACTCCTGCTGGCTGGCTCTTGGGTAGCTCTAACTCACAGAATCAGCCCTaGCACACAGGCTGCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: SPEHLTQTPAGWLLGSSNSQNQP*HTGCHF Trigger: AAAATGGCAGCCTGTGTGGCAGGGCTGATTCTGTGA...GTTAGAGCTACCCAAGAGCCAGCCAGCAGGAGTCTGTGTCAAATGCTCAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAACTGCCCTGCCTACAGGAGGCTGAAGCCAGCCCTGCTTAGATCTCTGACATACCCAGGGCGGTCCTaGTTCCTCTCTTCATCATCA | + |
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Preference number: 2 (lower is better) Translates to: INCPAYRRLKPALLRSLTYPGRS*FLSSSS Trigger: TGATGATGAAGAGAGGAAGCAGGACCGCCCTGGGTA...TGTCAGAGATCTAAGCAGGGCTGGCTTCAGCCTCCTGTAGGCAGGGCAGTTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGGAAGGCAGGGCTCCTTAGGCCAGATCGACCAGAAATGGCATCTGCCATGCCTACATTCATTCAGTaGAAGCCAGTAGAGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ARKAGLLRPDRPEMASAMPTFIQ*KPVESA Trigger: AGCACTCTCTACTGGCTTTCACTGAATGAATGTAGG...CATGGCAGATGCCATTTCTGGTCGATCTGGCCTAAGGAGCCCTGCCTTCCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAACTGCCCTGCCTACAGGAGGCTGAAGCCAGCCCTGCTTAGATCTCTGACACAATGTGTCCCACTCTaGCAGGGAAGAACTCGACAA | + |
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Preference number: 2 (lower is better) Translates to: INCPAYRRLKPALLRSLTQCVPL*QGRTRQ Trigger: TTGTCGAGTTCTTCCCTGGCAGAGTGGGACACATTG...TGTCAGAGATCTAAGCAGGGCTGGCTTCAGCCTCCTGTAGGCAGGGCAGTTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | CCAACCAGGCTGCTGTCACCACGGGCTAAGTATGCTTTCTTCCAACAAGCACCACTTCCAGTAACTTCTTaGTGTCTGTCACCGGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: PTRLLSPRAKYAFFQQAPLPVTS*CLSPGQ Trigger: CTGACCCGGTGACAGACAGCAAGAAGTTACTGGAAG...TGGTGCTTGTTGGAAGAAAGCATACTTAGCCCGTGGTGACAGCAGCCTGGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGGCTTCCTGCCTCCTGAAGGGCCCATCTGAACTCCCGCTGCGTGGATTTAAATGGCATCTGCCATaGTACCTGCTGTTTCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: MEASCLLKGPSELPLRGFKWHLP*YLLFLV Trigger: TACTAGAAACAGCAGGTACCATGGCAGATGCCATTT...AAATCCACGCAGCGGGAGTTCAGATGGGCCCTTCAGGAGGCAGGAAGCCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAACTGCCCTGCCTACAGGAGGCTGAAGCCAGCCCTGCTTAGATCTCTGACACTTCAGTCTGGGGAATaGGTGGAAATAGCAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: INCPAYRRLKPALLRSLTLQSGE*VEIART Trigger: TGTCCTTGCTATTTCCACTCATTCCCCAGACTGAAG...TGTCAGAGATCTAAGCAGGGCTGGCTTCAGCCTCCTGTAGGCAGGGCAGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGGAGGCAATTCACTCTGCCCACCAGCAGTCTGAAAGAAGAGCCAATGCTTCTGCTAAGAGACTCTaGAGGTCTTCAGTCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LVEAIHSAHQQSERRANASAKRL*RSSVWG Trigger: TCCCCAGACTGAAGACCTTCAGAGTCTCTTAGCAGA...AGCATTGGCTCTTCTTTCAGACTGCTGGTGGGCAGAGTGAATTGCCTCCACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCACACAGGTACAAAAAGCAGTGGTAAAGGTAGTTCTGTGGACTACTTTTGCCTCAGCCCTCAGCTaGCAAGCGCACCCCATCCTT | + |
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Preference number: 2 (lower is better) Translates to: LCTQVQKAVVKVVLWTTFASALS*QAHPIL Trigger: AAGGATGGGGTGCGCTTGGCAGCTGAGGGCTGAGGC...AAAAGTAGTCCACAGAACTACCTTTACCACTGCTTTTTGTACCTGTGTGCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CAA 90 bp | GACGGGCCCACTCACAGAATCAGCCCTGCCACACAGGCTGCCATTTaGAACTCATTCTTTGAGAGATTCCATAATTCATCCCAACCTCCT | + |
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Preference number: 2 (lower is better) Translates to: DGPTHRISPATQAAI*NSFFERFHNSSQPP Trigger: AGGAGGTTGGGATGAATTATGGAATCTCTCAAAGAATGAGTTCAAAATGGCAGCCTGTGTGGCAGGGCTGATTCTGTGAGTGGGCCCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CAA 90 bp | AGCAACGGATCAAGAATGCCAACACTAGTTCTGATCCTCTCTGGCTaGCAGGTGACCTTTTCTGTTCTGGTTCTCCCACCCGTGAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: SNGSRMPTLVLILSG*QVTFSVLVLPPVKQ Trigger: CTGTTTCACGGGTGGGAGAACCAGAACAGAAAAGGTCACCTGCAAGCCAGAGAGGATCAGAACTAGTGTTGGCATTCTTGATCCGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAAACTGCCCTGCCTACAGGAGGCTGAAGCCAGCCCTGCTTAGATCTCTGACAAGAGCTATTCTGCTTTaGGAAGAGCACTCTGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: INCPAYRRLKPALLRSLTRAILL*EEHSAK Trigger: CTTAGCAGAGTGCTCTTCTCAAAGCAGAATAGCTCT...TGTCAGAGATCTAAGCAGGGCTGGCTTCAGCCTCCTGTAGGCAGGGCAGTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGTGCACACAGGTACAAAAAGCAGTGGTAAAGGTAGTTCTGTGGACTACTTTTGGCAGACAGGGGCAGTaGGTCCGGGAGCGTTTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LCTQVQKAVVKVVLWTTFGRQGQ*VRERLE Trigger: TTCTAAACGCTCCCGGACTCACTGCCCCTGTCTGCC...AAAAGTAGTCCACAGAACTACCTTTACCACTGCTTTTTGTACCTGTGTGCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTGGAGGCAATTCACTCTGCCCACCAGCAGTCTGAAAGAAGAGCCAATGCTCAGAGAACACACTGTTaGCTGTGCTTTCTGGCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LVEAIHSAHQQSERRANAQRTHC*LCFLAL Trigger: TAGAGCCAGAAAGCACAGGCAACAGTGTGTTCTCTG...AGCATTGGCTCTTCTTTCAGACTGCTGGTGGGCAGAGTGAATTGCCTCCACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR GCA 90 bp | TCGCATGACGGGCCCACTCACAGAATCAGCCCTGCCACACAGGCTGCCATTTTGTACTGTTCAGTTAATTaGTTTAATTTTCTGGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SHDGPTHRISPATQAAILYCSVN*FNFLGW Trigger: CCAGCCCAGAAAATTAAAGCAATTAACTGAACAGTA...CAAAATGGCAGCCTGTGTGGCAGGGCTGATTCTGTGAGTGGGCCCGTCATGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGCAACGGATCAAGAATGCCAACACTAGTTCTGATCCTCTCTGGCTTGCAGTCTCCCCCATCCATATaGAAAAGGGATAAACTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: VSNGSRMPTLVLILSGLQSPPSI*KRDKLP Trigger: GGGCAGTTTATCCCTTTTCCATATGGATGGGGGAGA...CTGCAAGCCAGAGAGGATCAGAACTAGTGTTGGCATTCTTGATCCGTTGCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCCCTGAGCATTTGACACAGACTCCTGCTGGCTGGCTCTTGGGTAGCTCTAACTGGATCTTGAGATATTaGGAAATGTTTAAAGATGGC | + |
|
Preference number: 2 (lower is better) Translates to: SPEHLTQTPAGWLLGSSNWILRY*EMFKDG Trigger: GCCATCTTTAAACATTTCGCAATATCTCAAGATCCA...GTTAGAGCTACCCAAGAGCCAGCCAGCAGGAGTCTGTGTCAAATGCTCAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAACGGATTTTCTAATTCGAGTTACAGGAATACAAGAAAGGTTATTCAGTGTCCAAGGAGCTGCTGCTaGATCTACAGTCCACGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: VNGFSNSSYRNTRKVIQCPRSCC*IYSPRA Trigger: GGCCCGTGGACTGTAGATTCAGCAGCAGCTCCTTGG...ACACTGAATAACCTTTCTTGTATTCCTGTAACTCGAATTAGAAAATCCGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGAACGGATTTTCTAATTCGAGTTACAGGAATACAAGAAAGGTTATTCAGTGTTGCAGTGATGGCAGGTaGCCTAGGCTTCAGTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: VNGFSNSSYRNTRKVIQCCSDGR*PRLQCP Trigger: GGGACACTGAAGCCTAGGGCACCTGCCATCACTGCA...ACACTGAATAACCTTTCTTGTATTCCTGTAACTCGAATTAGAAAATCCGTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGAACGGATTTTCTAATTCGAGTTACAGGAATACAAGAAAGGTTATTCAGTGTGAGTGTGTGTATGTGTaGGCGCGAAGGGTGTATACA | + |
|
Preference number: 2 (lower is better) Translates to: VNGFSNSSYRNTRKVIQCECVYV*ARRVYT Trigger: TGTATACACCCTTCGCGCGCACACATACACACACTC...ACACTGAATAACCTTTCTTGTATTCCTGTAACTCGAATTAGAAAATCCGTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR CAA 90 bp | TTATTGTTTGACCAACATGCTGAGTCTTTTCCACATATTACACAGTaGAATGTAAAGTCAATATGGCCACTGTGCCTTCTGAGCCCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLFDQHAESFPHITQ*NVKSIWPLCLLSPV Trigger: TACTGGGCTCAGAAGGCACAGTGGCCATATTGACTTTACATTCAACTGTGTAATATGTGGAAAAGACTCAGCATGTTGGTCAAACAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAACGGATTTTCTAATTCGAGTTACAGGAATACAAGAAAGGTTATTCAGTGTCACAGGCTGCCATTTTaGACTCATTCTTTGAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VNGFSNSSYRNTRKVIQCHRLPF*THSLRD Trigger: ATCTCTCAAAGAATGAGTTCAAAATGGCAGCCTGTG...ACACTGAATAACCTTTCTTGTATTCCTGTAACTCGAATTAGAAAATCCGTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | GGCTGGCCTTCGTTGCTATGGAGGCTTCCTGCCTCCTaGAGGGCCCATCTGAACTCCCGCTGCGTGGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: GWPSLLWRLPAS*RAHLNSRCVDF Trigger: GAAATCCACGCAGCGGGAGTTCAGATGGGCCCTTCAGGAGGCAGGAAGCCTCCATAGCAACGAAGGCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | GTACCCTGGGGCAGCAGCCTTCTGGAAACCCCACAGTaGCTCCAAGATGCGTGCAGTGCAGCTGCCAACACT | + |
|
Preference number: 3 (lower is better) Translates to: VPWGSSLLETPQ*LQDACSAAANT Trigger: AGTGTTGGCAGCTGCACTGCACGCATCTTGGAGTCACTGTGGGGTTTCCAGAAGGCTGCTGCCCCAGGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR GCA 72 bp | CTACAGTCCACGGGCCTTCATCTCCTCTCAGGGGCCTaGCAATGTGTCCCACTCTGCCAGGGAAGAACTCGA | + |
|
Preference number: 3 (lower is better) Translates to: LQSTGLHLLSGA*QCVPLCQGRTR Trigger: TCGAGTTCTTCCCTGGCAGAGTGGGACACATTGGCAGGCCCCTGAGAGGAGATGAAGGCCCGTGGACTGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR GCA 72 bp | CTCCCACCCGTGAAACAGGAAGGGTTTGGCTCCCAGTaGTGTGGCAAGGTGATGGTGCCTCCCATTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPPVKQEGFGSQ*CGKVMVPPILG Trigger: CCCAAGAATGGGAGGCACCATCACCTTGCCACAGCACTGGGAGCCAAACCCTTCCTGTTTCACGGGTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCAGCCAAGGAGCTGCTGCTGAATCTACAGTCCACGGGCCTTCATCTCCTCGCGGGTTTGGTTGGTTaGGGCCATGTGACCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EAAKELLLNLQSTGLHLLAGLVG*GHVTQN Trigger: GTTCTGGGTCACATGGCCCAAACCAACCAAACCCGC...GAGGAGATGAAGGCCCGTGGACTGTAGATTCAGCAGCAGCTCCTTGGCTGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGGCTTCCTGCCTCCTGAAGGGCCCATCTGAACTCCCGCTGCGTGGATTTCCTGCTGGCTGGCTCTaGGGTAGCTCTAACTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: MEASCLLKGPSELPLRGFPAGWL*GSSNLA Trigger: AGCTAAGTTAGAGCTACCCAAGAGCCAGCCAGCAGG...AAATCCACGCAGCGGGAGTTCAGATGGGCCCTTCAGGAGGCAGGAAGCCTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR CCA 72 bp | ACCCGTGAAACAGGAAGGGTTTGGCTCCCAGTGCTGTaGCAAGGTGATGGTGCCTCCCATTCTTGGGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TRETGRVWLPVL*QGDGASHSWGR Trigger: TCTCCCCCAAGAATGGGAGGCACCATCACCTTGCCACAGCACTGGGAGCCAAACCCTTCCTGTTTCACGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | AAGGAGAAGAGGCGGAAGCAGCCAAGGAGCTGCTGCTaGATCTACAGTCCACGGGCCTTCATCTCCTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KEKRRKQPRSCC*IYSPRAFISSQ Trigger: CTGAGAGGAGATGAAGGCCCGTGGACTGTAGATTCAGCAGCAGCTCCTTGGCTGCTTCCGCCTCTTCTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | GGTCCTGCTTCCTCTCTTCATCATCAGAACCGGCTTTaGCACAGTCTCCCAGGATGGAGTCGCATGACGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GPASSLHHQNRL*HSLPGWSRMTG Trigger: GCCCGTCATGCGACTCCATCCTGGGAGACTGTGTCAAAGCCGGTTCTGATGATGAAGAGAGGAAGCAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR GCA 72 bp | AGCTGCCAAGCGCACCCCATCCTTCCAGTAACTTCTTaGTGTCTGTCACCGGGTCAGCCCAGAGAACACACT | + |
|
Preference number: 3 (lower is better) Translates to: SCQAHPILPVTS*CLSPGQPREHT Trigger: AGTGTGTTCTCTGGGCTGACCCGGTGACAGACAGCAAGAAGTTACTGGAAGGATGGGGTGCGCTTGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR GCA 72 bp | TGGGCCAGTAGATTACACACTGCCTCAGCCCTCAGCTaGCAAGCGCACCCCATCCTTCCAGTAACTTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: WASRLHTASALS*QAHPILPVTSC Trigger: GCAAGAAGTTACTGGAAGGATGGGGTGCGCTTGGCAGCTGAGGGCTGAGGCAGTGTGTAATCTACTGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR GCA 72 bp | GTCATGGCCGACTCCTCTCACTTCCTCAATGGTAGTTaGAGTGATGGCAGGTGCCCTAGGCTTCAGTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VMADSSHFLNGS*SDGRCPRLQCP Trigger: GGGACACTGAAGCCTAGGGCACCTGCCATCACTGCAACTACCATTGAGGAAGTGAGAGGAGTCGGCCATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR CCA 72 bp | GGTAGCTTGGCTGAGGAAATAAGGCCAGGGCACCTCTaGAGTGGGGGAGCAATGGGGCAGAACCCTAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: GSLAEEIRPGHL*SGGAMGQNPNS Trigger: AGAATTAGGGTTCTGCCCCATTGCTCCCCCACTCCAGAGGTGCCCTGGCCTTATTTCCTCAGCCAAGCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGGAAGGCAGGGCTCCTTAGGCCAGATCGACCAGAAATGGCATCTGCCATGCCAGAGAACACACTGTaGCCTGTGCTTTCTGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ARKAGLLRPDRPEMASAMPENTL*PVLSGS Trigger: AGAGCCAGAAAGCACAGGCAACAGTGTGTTCTCTGG...CATGGCAGATGCCATTTCTGGTCGATCTGGCCTAAGGAGCCCTGCCTTCCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | ACTGCCCCAGGCCTGCCCAAAGGCAGACAGGGGCAGTaGGTCCGGGAGCGTTTAGAATATAAGAGCTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: TAPGLPKGRQGQ*VRERLEYKSYS Trigger: AGAATAGCTCTTATATTCTAAACGCTCCCGGACTCACTGCCCCTGTCTGCCTTTGGGCAGGCCTGGGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | CCTTGTGGAGGCAATTCACTCTGCCCACCAGCAGTCTaGAAGAAGAGCCAATGCTATGGGGCTAGGCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PCGGNSLCPPAV*KKSQCYGARLL Trigger: GAGCAGCCTAGCCCCATAGCATTGGCTCTTCTTTCAGACTGCTGGTGGGCAGAGTGAATTGCCTCCACAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR GCA 72 bp | CACGTGACGTTTCGATTATGCTCGTACATTGGTCCTTaGCTTCTGGAGGAGGTACCCAGGGCGGTCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HVTFRLCSYIGP*LLEEVPRAVLL Trigger: AAGCAGGACCGCCCTGGGTACCTCCTCCAGAAGGCAAGGACCAATGTACGAGCATAATCGAAACGTCACGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR CCA 72 bp | CGTTTCGATTATGCTCGTACATTGGTCCTTGCCTTCTaGAGGAGGTACCCAGGGCGGTCCTGCTTCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RFDYARTLVLAF*RRYPGRSCFLS Trigger: AGAGAGGAAGCAGGACCGCCCTGGGTACCTCCTCCAGAAGGCAAGGACCAATGTACGAGCATAATCGAAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | CCGCCCTCTGCTCCTCACTTTAAAGGACAGGTGAGGTaGGAAGTCAACACATCACAATGGCAGGCTGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PPSAPHFKGQVR*EVNTSQWQAGL Trigger: AAGGCCAGCCTGCCATTGTGATGTGTTGACTTCTCACCTCACCTGTCCTTTAAAGTGAGGAGCAGAGGGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR GCA 72 bp | TCACCCTACATTCATTCAGTGAAAGCCAGTAGAGAGTaGTGTCAGTGGGGCTCTGCCAGAGGCCACCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SPYIHSVKASRE*CQWGSARGHQQ Trigger: TTGCTGGTGGCCTCTGGCAGAGCCCCACTGACAGCACTCTCTACTGGCTTTCACTGAATGAATGTAGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR GCA 72 bp | CTACAGTTAGTTCTGTTGGGGCCTGGCTGCCTTGATTaGCTTTTGGGAAGGAGATGGGTAGCTTGGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQLVLLGPGCLD*LLGRRWVAWLR Trigger: CCTCAGCCAAGCTACCCATCTCCTTCCCAAAAGGCAATCAAGGCAGCCAGGCCCCAACAGAACTAACTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR GCA 72 bp | CCAGGTCCACTACAGTTAGTTCTGTTGGGGCCTGGCTaGCTTGATTGCCTTTTGGGAAGGAGATGGGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PGPLQLVLLGPG*LDCLLGRRWVA Trigger: AGCTACCCATCTCCTTCCCAAAAGGCAATCAAGGCAGCCAGGCCCCAACAGAACTAACTGTAGTGGACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR GCA 72 bp | AGTCTCTTAAAGAAAAGGAGGAGGGCCATGCCCATCTaGCAGGCCAGGCAGTGTCCAGAGAGAGGAACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLLKKRRRAMPI*QARQCPERGTE Trigger: TTCAGTTCCTCTCTCTGGACACTGCCTGGCCTGGCAGATGGGCATGGCCCTCCTCCTTTTCTTTAAGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR CCA 72 bp | CCAGCCCTGCTTAGATCTCTGACACTGGTTAGCCACTaGGTTACAGAGACTAGGCCCAGGCGTCTATATTCC | + |
|
Preference number: 3 (lower is better) Translates to: PALLRSLTLVSH*VTETRPRRLYS Trigger: GGAATATAGACGCCTGGGCCTAGTCTCTGTAACCCAGTGGCTAACCAGTGTCAGAGATCTAAGCAGGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR CCA 72 bp | TCAGCCACTTTGCTGACAGCCTCTCCCCCATCCATATaGAAAAGGGATAAACTGCCCTGCCTACAGGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SATLLTASPPSI*KRDKLPCLQEA Trigger: AGCCTCCTGTAGGCAGGGCAGTTTATCCCTTTTCCATATGGATGGGGGAGAGGCTGTCAGCAAAGTGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR CCA 72 bp | TCGAGCCCTGAGCATTTGACACAGACTCCTGCTGGCTaGCTCTTGGGTAGCTCTAACTTAGCTCTCTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSPEHLTQTPAG*LLGSSNLALFS Trigger: GCTGAAGAGAGCTAAGTTAGAGCTACCCAAGAGCCAGCCAGCAGGAGTCTGTGTCAAATGCTCAGGGCTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGCAACGGATCAAGAATGCCAACACTAGTTCTGATCCTCTCTGGCTTGCAGCTCTCTTCAGCCACTTaGCTGACAGCCTCTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VSNGSRMPTLVLILSGLQLSSAT*LTASPP Trigger: TGGGGGAGAGGCTGTCAGCAAAGTGGCTGAAGAGAG...CTGCAAGCCAGAGAGGATCAGAACTAGTGTTGGCATTCTTGATCCGTTGCTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | CATCTGCCAGGCCAGGCAGTGTCCAGAGAGAGGAACTaGATTACGACATTGGGATCATGCCCTAAGAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HLPGQAVSRERN*ITTLGSCPKRN Trigger: GTTCCTCTTAGGGCATGATCCCAATGTCGTAATTCAGTTCCTCTCTCTGGACACTGCCTGGCCTGGCAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCTGAGCATTTGACACAGACTCCTGCTGGCTGGCTCTTGGGTAGCTCTAACTTCCTAGCTACCACCTaGCAACCCTTGTCTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPEHLTQTPAGWLLGSSNFLATT*QPLSLL Trigger: CAACAAAGACAAGGGTTGCAAGGTGGTAGCTAGGAA...GTTAGAGCTACCCAAGAGCCAGCCAGCAGGAGTCTGTGTCAAATGCTCAGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGGAAGGCAGGGCTCCTTAGGCCAGATCGACCAGAAATGGCATCTGCCATGAGATTAAAGTTGGATTaGACTGTGGAGTGCGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ARKAGLLRPDRPEMASAMRLKLD*TVECGF Trigger: AAACCCGCACTCCACAGTCAAATCCAACTTTAATCT...CATGGCAGATGCCATTTCTGGTCGATCTGGCCTAAGGAGCCCTGCCTTCCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTTCTGGAGGAGGTACCCAGGGCGGTCCTGCTTCCTCTCTTCATCATCAGAACACAGGCTGCCATTTaGAACTCATTCTTTGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CLLEEVPRAVLLPLFIIRTQAAI*NSFFER Trigger: TCTCTCAAAGAATGAGTTCAAAATGGCAGCCTGTGT...TCTGATGATGAAGAGAGGAAGCAGGACCGCCCTGGGTACCTCCTCCAGAAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | AGTTTAGAAACTAGTGAGCATCGAGCCCTGAGCATTTaGCACAGACTCCTGCTGGCTGGCTCTTGGGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLETSEHRALSI*HRLLLAGSWVA Trigger: AGCTACCCAAGAGCCAGCCAGCAGGAGTCTGTGTCAAATGCTCAGGGCTCGATGCTCACTAGTTTCTAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | AAATGCCGCCCTCTGCTCCTCACTTTAAAGGACAGGTaGGGTGAGAAGTCAACACATCACAATGGCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KCRPLLLTLKDR*GEKSTHHNGRL Trigger: CAGCCTGCCATTGTGATGTGTTGACTTCTCACCTCACCTGTCCTTTAAAGTGAGGAGCAGAGGGCGGCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR CCA 72 bp | TCCTTAGGCCAGATCGACCAGAAATGGCATCTGCCATaGTACCTGCTGTTTCTAGTAGCAGGCCATGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: SLGQIDQKWHLP*YLLFLVAGHDV Trigger: GACATCATGGCCTGCTACTAGAAACAGCAGGTACCATGGCAGATGCCATTTCTGGTCGATCTGGCCTAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGGCTTCCTGCCTCCTGAAGGGCCCATCTGAACTCCCGCTGCGTGGATTTCTATGCACTATTTTATaGAAGGCAAGACAACCACAA | + |
|
Preference number: 3 (lower is better) Translates to: MEASCLLKGPSELPLRGFLCTIL*KARQPQ Trigger: TTGTGGTTGTCTTGCCTTCAATAAAATAGTGCATAG...AAATCCACGCAGCGGGAGTTCAGATGGGCCCTTCAGGAGGCAGGAAGCCTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR TCA 72 bp | CCACCTTGCAACCCTTGTCTTTGTTGCCTGAGACATTaGACTGACATGGCCATGCCTTCCTGGATCTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PPCNPCLCCLRH*TDMAMPSWILR Trigger: TCTCAAGATCCAGGAAGGCATGGCCATGTCAGTTCAATGTCTCAGGCAACAAAGACAAGGGTTGCAAGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR CCA 72 bp | AATTCATCCCAACCTCCTTGTTGGAGTTCTGCCTTGTaGAGGCAATTCACTCTGCCCACCAGCAGTCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NSSQPPCWSSAL*RQFTLPTSSLK Trigger: TTTCAGACTGCTGGTGGGCAGAGTGAATTGCCTCCACAAGGCAGAACTCCAACAAGGAGGTTGGGATGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
||
| 3UTR CCA 72 bp | CGGATCAAGAATGCCAACACTAGTTCTGATCCTCTCTaGCTTGCAGGTGACCTTTTCTGTTCTGGTTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RIKNANTSSDPL*LAGDLFCSGSP Trigger: GGGAGAACCAGAACAGAAAAGGTCACCTGCAAGCCAGAGAGGATCAGAACTAGTGTTGGCATTCTTGATCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 72 bp | AACCCCACAGTGACTCCAAGATGCGTGCAGTGCAGCTaGCAACACTCCCAAAGGTATTCATACAAAGATTTC | + |
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Preference number: 3 (lower is better) Translates to: NPTVTPRCVQCS*QHSQRYSYKDF Trigger: GAAATCTTTGTATGAATACCTTTGGGAGTGTTGGCAGCTGCACTGCACGCATCTTGGAGTCACTGTGGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 72 bp | AACTCCCGCTGCGTGGATTTCCTGATAATTATACCCTaGAGAGAGTATCAATCAGACAGGGTCTGGAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: NSRCVDFLIIIP*REYQSDRVWSP Trigger: TGGACTCCAGACCCTGTCTGATTGATACTCTCTGCAGGGTATAATTATCAGGAAATCCACGCAGCGGGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR CAA 90 bp | AGTAACTTCTTGCTGTCTGTCACCGGGTCAGCCCAGAGAACACACTGTTGCCTGTTTGTTAGATTAAAGTaGGATTTGACTGTGGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: SNFLLSVTGSAQRTHCCLFVRLK*DLTVEC Trigger: GCACTCCACAGTCAAATCCAACTTTAATCTAACAAA...CAGGCAACAGTGTGTTCTCTGGGCTGACCCGGTGACAGACAGCAAGAAGTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 72 bp | GTCCAGAAGGTTAAAATTCACCCTACATTCATTCAGTaGAAGCCAGTAGAGAGTGCTGTCAGTGGGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: VQKVKIHPTFIQ*KPVESAVSGAL Trigger: CAGAGCCCCACTGACAGCACTCTCTACTGGCTTTCACTGAATGAATGTAGGGTGAATTTTAACCTTCTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 72 bp | CTCACAGAATCAGCCCTGCCACACAGGCTGCCATTTTaGACTCATTCTTTGAGAGATTCCATAATTCATCCC | + |
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Preference number: 3 (lower is better) Translates to: LTESALPHRLPF*THSLRDSIIHP Trigger: GGGATGAATTATGGAATCTCTCAAAGAATGAGTTCAAAATGGCAGCCTGTGTGGCAGGGCTGATTCTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR TCA 72 bp | GACATTGAACTGACATGGCCATGCCTTCCTGGATCTTaGGATATTGCGAAATGTTTAAAGATGGCAACGGGG | + |
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Preference number: 3 (lower is better) Translates to: DIELTWPCLPGS*DIAKCLKMATG Trigger: CCCCGTTGCCATCTTTAAACATTTCGCAATATCTCAAGATCCAGGAAGGCATGGCCATGTCAGTTCAATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 72 bp | TGTTTTGTTAGATTAAAGTTGGATTTGACTGTGGAGTaGGGGTTTGGTTGGTTTGGGCCATGTGACCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: CFVRLKLDLTVE*GFGWFGPCDPE Trigger: TTCTGGGTCACATGGCCCAAACCAACCAAACCCGCACTCCACAGTCAAATCCAACTTTAATCTAACAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTGCACACAGGTACAAAAAGCAGTGGTAAAGGTAGTTCTGTGGACTACTTTTAAAGATCCTCCAGTCTaGATAAACTCAGTTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: LCTQVQKAVVKVVLWTTFKDPPV*INSVPT Trigger: GGTGGGAACTGAGTTTATCAAGACTGGAGGATCTTT...AAAAGTAGTCCACAGAACTACCTTTACCACTGCTTTTTGTACCTGTGTGCACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 72 bp | ACACATATAAAAACTAAACACGTGACGTTTCGATTATaGTCGTACATTGGTCCTTGCCTTCTGGAGGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: THIKTKHVTFRL*SYIGPCLLEEV Trigger: TACCTCCTCCAGAAGGCAAGGACCAATGTACGAGCATAATCGAAACGTCACGTGTTTAGTTTTTATATGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CCA 72 bp | TTTCCACATATTACACAGTTGAATGTAAAGTCAATATaGCCACTGTGCCTTCTGAGCCCAGTACAGATAGAA | + |
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Preference number: 3 (lower is better) Translates to: FPHITQLNVKSI*PLCLLSPVQIE Trigger: TTCTATCTGTACTGGGCTCAGAAGGCACAGTGGCCATATTGACTTTACATTCAACTGTGTAATATGTGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR GCA 72 bp | CTGTGGACTACTTTTGCTTGTAGTTTAACACATCTATaGACTATTTTATTGAAGGCAAGACAACCACAAGTT | + |
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Preference number: 3 (lower is better) Translates to: LWTTFACSLTHL*TILLKARQPQV Trigger: AACTTGTGGTTGTCTTGCCTTCAATAAAATAGTGCATAGATGTGTTAAACTACAAGCAAAAGTAGTCCACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS-3UTR CCA 90 bp | AGTAACTTCTTGCTGTCTGTCACCGGGTCAGCCCAGAGAACACACTGTTGCCTGAGCAGCCGCCCTCGCTaGCCGGGGGCTCCTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SNFLLSVTGSAQRTHCCLSSRPR*PGAPEA Trigger: AGCCTCAGGAGCCCCCGGCCAGCGAGGGCGGCTGCT...CAGGCAACAGTGTGTTCTCTGGGCTGACCCGGTGACAGACAGCAAGAAGTTACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS-3UTR GCA 90 bp | TCGCATGACGGGCCCACTCACAGAATCAGCCCTGCCACACAGGCTGCCATTTTGCCTGGACATTCTCCATaGCGGGCAGAGCTGACGCCA | + |
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Preference number: 4 (lower is better) Translates to: SHDGPTHRISPATQAAILPGHSP*RAELTP Trigger: TGGCGTCAGCTCTGCCCGGCATGGAGAATGTCCAGG...CAAAATGGCAGCCTGTGTGGCAGGGCTGATTCTGTGAGTGGGCCCGTCATGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CAA 72 bp | CAGCTGCCAAGCGCACCCCATCCTTCCAGTAACTTCTaGCTGTCTGTCACCGGGTCAGCCCAGAGAACACAC | + |
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Preference number: 4 (lower is better) Translates to: QLPSAPHPSSNF*LSVTGSAQRTH Trigger: GTGTGTTCTCTGGGCTGACCCGGTGACAGACAGCAAGAAGTTACTGGAAGGATGGGGTGCGCTTGGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CAA 72 bp | ACACGTGACGTTTCGATTATGCTCGTACATTGGTCCTaGCCTTCTGGAGGAGGTACCCAGGGCGGTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TRDVSIMLVHWS*PSGGGTQGGPA Trigger: AGCAGGACCGCCCTGGGTACCTCCTCCAGAAGGCAAGGACCAATGTACGAGCATAATCGAAACGTCACGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS-3UTR TCA 90 bp | GATGCGTGCAGTGCAGCTGCCAACACTCCCAAAGGTATTCATACAAAGATTTCACTGGCCGGGGGCTCCTaGGGCTTGTCCAGCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: DACSAAANTPKGIHTKISLAGGS*GLSSLM Trigger: CATCAAGCTGGACAAGCCTCAGGAGCCCCCGGCCAG...TGAAATCTTTGTATGAATACCTTTGGGAGTGTTGGCAGCTGCACTGCACGCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS-3UTR GCA 90 bp | GTCAGCAACGGATCAAGAATGCCAACACTAGTTCTGATCCTCTCTGGCTTGCAGAGCTGGGGATCAGGCTaGGGAACCTCTCTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VSNGSRMPTLVLILSGLQSWGSG*GTSLAQ Trigger: CTGGGCAAGAGAGGTTCCGCAGCCTGATCCCCAGCT...CTGCAAGCCAGAGAGGATCAGAACTAGTGTTGGCATTCTTGATCCGTTGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS-3UTR CCA 90 bp | TGCCTTCTGGAGGAGGTACCCAGGGCGGTCCTGCTTCCTCTCTTCATCATCAGAAGAAGTCAATCCCGATaGTTGCCTGGTAGGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: CLLEEVPRAVLLPLFIIRRSQSR*LPGRCC Trigger: ACAACACCTACCAGGCAACCATCGGGATTGACTTCT...TCTGATGATGAAGAGAGGAAGCAGGACCGCCCTGGGTACCTCCTCCAGAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CAA 72 bp | TCAGTGTCCCTGAGCCACCCAGCATCACACATTGAGTaGGCGAGTCAGCCTAACCATGTGTGTCAATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SVSLSHPASHIE*ASQPNHVCQWL Trigger: CAACCATTGACACACATGGTTAGGCTGACTCGCCAACTCAATGTGTGATGCTGGGTGGCTCAGGGACACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CAA 72 bp | CATAATTCATCCCAACCTCCTTGTTGGAGTTCTGCCTaGTGGAGGCAATTCACTCTGCCCACCAGCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: HNSSQPPCWSSA*WRQFTLPTSSL Trigger: CAGACTGCTGGTGGGCAGAGTGAATTGCCTCCACAAGGCAGAACTCCAACAAGGAGGTTGGGATGAATTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS-3UTR GCA 90 bp | AGCCCTGAGCATTTGACACAGACTCCTGCTGGCTGGCTCTTGGGTAGCTCTAACCAATCATCCCTTCTTTaGTCTTCTCCTGGACATTCT | + |
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Preference number: 4 (lower is better) Translates to: SPEHLTQTPAGWLLGSSNQSSLL*SSPGHS Trigger: AGAATGTCCAGGAGAAGAGCAAAGAAGGGATGATTG...GTTAGAGCTACCCAAGAGCCAGCCAGCAGGAGTCTGTGTCAAATGCTCAGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CAA 72 bp | TCAAGAATGCCAACACTAGTTCTGATCCTCTCTGGCTaGCAGGTGACCTTTTCTGTTCTGGTTCTCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: SRMPTLVLILSG*QVTFSVLVLPP Trigger: GGGTGGGAGAACCAGAACAGAAAAGGTCACCTGCAAGCCAGAGAGGATCAGAACTAGTGTTGGCATTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS-3UTR GCA 90 bp | CAACAATACTACTTACACTACCTGCCCTTTCACAATCTCTGCACTGCTCACAGTGTCTTCCCGACGCTCTaGTCCCCTAGGAAAACCAAC | + |
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Preference number: 4 (lower is better) Translates to: QQYYLHYLPFHNLCTAHSVFPTL*SPRKTN Trigger: GTTGGTTTTCCTAGGGGAGCAGAGCGTCGGGAAGAC...ACTGTGAGCAGTGCAGAGATTGTGAAAGGGCAGGTAGTGTAAGTAGTATTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| 3UTR CAA 72 bp | ACTCACAGAATCAGCCCTGCCACACAGGCTGCCATTTaGAACTCATTCTTTGAGAGATTCCATAATTCATCC | + |
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Preference number: 4 (lower is better) Translates to: THRISPATQAAI*NSFFERFHNSS Trigger: GGATGAATTATGGAATCTCTCAAAGAATGAGTTCAAAATGGCAGCCTGTGTGGCAGGGCTGATTCTGTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS-3UTR GCA 90 bp | GTGAACGGATTTTCTAATTCGAGTTACAGGAATACAAGAAAGGTTATTCAGTGTATCCATTTAGAAGTCTaGTGGAAGGAGTTGAGATTA | + |
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Preference number: 4 (lower is better) Translates to: VNGFSNSSYRNTRKVIQCIHLEV*WKELRL Trigger: TAATCTCAACTCCTTCCAGCAGACTTCTAAATGGAT...ACACTGAATAACCTTTCTTGTATTCCTGTAACTCGAATTAGAAAATCCGTTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS-3UTR CAA 90 bp | GTCTTGATAAACTCAGTTCCCACCCCGTTAGGAAGCTATAGGAGGCAAAACAAGATGACGCTCAGTTCTTaGGCCCGCTGTTCTCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: VLINSVPTPLGSYRRQNKMTLSS*ARCSPS Trigger: GGAAGGAGAACAGCGGGCCAAAGAACTGAGCGTCAT...CTTGTTTTGCCTCCTATAGCTTCCTAACGGGGTGGGAACTGAGTTTATCAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS-3UTR CAA 90 bp | CAACAATACTACTTACACTACCTGCCCTTTCACAATCTCTGCACTGCTCACAGTCCTAGGAAAACCAACTaGAATTTTCGCAGCGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: QQYYLHYLPFHNLCTAHSPRKTN*NFRSGF Trigger: GAACCCGCTGCGAAAATTCAAGTTGGTTTTCCTAGG...ACTGTGAGCAGTGCAGAGATTGTGAAAGGGCAGGTAGTGTAAGTAGTATTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS GCA 72 bp | TCATCCCTTCTTTGCTCTTCTCCTGGACATTCTCCATaGCGGGCAGAGCTGACGCCACACGTCGGAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSLLCSSPGHSP*RAELTPHVGRA Trigger: AGCTCTTCCGACGTGTGGCGTCAGCTCTGCCCGGCATGGAGAATGTCCAGGAGAAGAGCAAAGAAGGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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| CDS CAA 72 bp | TTCGCGCTGGTCTCGATGAACATGACGCTCAGTTCTTaGGCCCGCTGTTCTCCTTCCTCGATGGTTATCTGC | + |
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Preference number: 6 (lower is better) Translates to: FALVSMNMTLSS*ARCSPSSMVIC Trigger: GCAGATAACCATCGAGGAAGGAGAACAGCGGGCCAAAGAACTGAGCGTCATGTTCATCGAGACCAGCGCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035155.8 |
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