Pregenerated sensors for RAB40C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025730Ensembl transcript IDs: ENSMUST00000026826.14, ENSMUST00000164738.2, ENSMUST00000164982.8, ENSMUST00000166146.8, ENSMUST00000167018.8, ENSMUST00000167626.8, ENSMUST00000179998.8
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCTGCTAGACACTGGGGTCCTAGGCCCTGTGCCCATGCCCAGATaGACGGAGCCCGCCAGAAGCTCTGTAGCCCCGGCTGGAGATGTG | + |
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Preference number: 1 (lower is better) Translates to: KLLDTGVLGPVPMPR*TEPARSSVAPAGDV Trigger: CACATCTCCAGCCGGGGCTACAGAGCTTCTGGCGGGCTCCGTGCATCTGGGCATGGGCACAGGGCCTAGGACCCCAGTGTCTAGCAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR CCA 90 bp | GAGCCTGGCTCACTTCCAGTCTGGAGTCCAGGACTGGCTCACCCCTaGTCCCGTAGCACCAGCAGCCCTGCTGCCTGGTTTGCGGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: EPGSLPVWSPGLAHP*SRSTSSPAAWFAEH Trigger: ATGCTCCGCAAACCAGGCAGCAGGGCTGCTGGTGCTACGGGACCAGGGGTGAGCCAGTCCTGGACTCCAGACTGGAAGTGAGCCAGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR GCA 90 bp | AGCACCAGCAGCCCTGCTGCCTGGTTTGCGGAGCATGTTCTCTCCTaGATGCCCCTCCCTCCACTAGCTCAGATGTGGAGGAAAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: STSSPAAWFAEHVLS*MPLPPLAQMWRKAW Trigger: CCAGGCTTTCCTCCACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAACCAGGCAGCAGGGCTGCTGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR GCA 90 bp | GAAAGCCTGGAGAGACCCAGGCAGGGTTGTGTAGCCAAGTCTTCCTaGACACAGCAGGGCCTAGCGCATGGTCAGGAGTGCTCCAGCGTA | + |
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Preference number: 1 (lower is better) Translates to: ESLERPRQGCVAKSS*TQQGLAHGQECSSV Trigger: TACGCTGGAGCACTCCTGACCATGCGCTAGGCCCTGCTGTGTGCAGGAAGACTTGGCTACACAACCCTGCCTGGGTCTCTCCAGGCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR CCA 90 bp | AGGGGAGAAGGCTGCCCAGCCCAGACTGGGAGAGGAGGAGCATTGTaGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCAGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: RGEGCPAQTGRGGAL*GNSPWLHKLLRPVS Trigger: ACTCACTGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTCTCCCAGTCTGGGCTGGGCAGCCTTCTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR TCA 90 bp | TCAGGCAGTTCCCACAACCATAGCCCCGTCCCTCCCTACAGGCATTaGCTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGT | + |
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Preference number: 1 (lower is better) Translates to: SGSSHNHSPVPPYRH*LNLPEQQAGAASTS Trigger: ACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAGGGACGGGGCTATGGTTGTGGGAACTGCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR TCA 90 bp | CTGCTTCATCCCTCCTTCCCTGACATCCTGAGCTTCCCCAACGGCTaGTGTGGCTATGAGGGGCATCCAGGCTTCCCTGACAGCCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: LLHPSFPDILSFPNG*CGYEGHPGFPDSPL Trigger: TAAAGGGCTGTCAGGGAAGCCTGGATGCCCCTCATAGCCACATCAGCCGTTGGGGAAGCTCAGGATGTCAGGGAAGGAGGGATGAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR CCA 90 bp | GTCCCGCTAGGAGATCTTGCAGTTGCTCCGAGAGCAGTTCTGAGGTaGGCTCTGAGGGGGCCGGATGGACTTAGACCTCTTAAGGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: VPLGDLAVAPRAVLR*ALRGPDGLRPLKAV Trigger: AACAGCCTTAAGAGGTCTAAGTCCATCCGGCCCCCTCAGAGCCCACCTCAGAACTGCTCTCGGAGCAACTGCAAGATCTCCTAGCGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR TCA 90 bp | CATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCAGTaGGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAGTGTCACTAAG | + |
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Preference number: 1 (lower is better) Translates to: HCGGTVHGFTSCSGQ*VPKEGLGVPESVTK Trigger: CTTAGTGACACTCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR GCA 90 bp | TGCAGGCTGAAAACTCGATTGGGTCTCCAGATCTTCTCCATGCCATaGCGCATGAGCACGATACGGGAGAGCTCAGTGAAGGACTCAATG | + |
|
Preference number: 1 (lower is better) Translates to: CRLKTRLGLQIFSMP*RMSTIRESSVKDSM Trigger: CATTGAGTCCTTCACTGAGCTCTCCCGTATCGTGCTCATGCGGCATGGCATGGAGAAGATCTGGAGACCCAATCGAGTTTTCAGCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR TCA 90 bp | AGAAGCTCTGTAGCCCCGGCTGGAGATGTGTATAGTAAACATCACTaGAAGGGCCAGGGCACAATAGGAGGGATTAGTGGGGTTTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: RSSVAPAGDVYSKHH*KGQGTIGGISGVSQ Trigger: CTGGGAAACCCCACTAATCCCTCCTATTGTGCCCTGGCCCTTTCAGTGATGTTTACTATACACATCTCCAGCCGGGGCTACAGAGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR CCA 90 bp | CTATCGCGATTCCAGAGAAAAGGTCTCTGTCAACAGCAACAGGACTaGTGGGGAAAGGTGATGCTTGATTGTACCCAGCCTCTGGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: LSRFQRKGLCQQQQD*WGKVMLDCTQPLGQ Trigger: CTGACCCAGAGGCTGGGTACAATCAAGCATCACCTTTCCCCACCAGTCCTGTTGCTGTTGACAGAGACCTTTTCTCTGGAATCGCGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGGTCAGGCTGCTGCTTATCAGGCAGTTCCCACAACCATAGCCCCGTCCCACAGGGGAGAAGGCTaGCCAGCCCAGACTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LPGQAAAYQAVPTTIAPSHRGEG*PAQTGR Trigger: TCTCCCAGTCTGGGCTGGGCAGCCTTCTCCCCTGTG...GGACGGGGCTATGGTTGTGGGAACTGCCTGATAAGCAGCAGCCTGACCTGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCTCCACTAGCTCAGATGTGGAGGAAAGCCTGGAGAGACCCAGGCAGGCCTTCCCTGACATCCTaGGCTTCCCCAACGGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: PLPPLAQMWRKAWRDPGRPSLTS*ASPTAD Trigger: ATCAGCCGTTGGGGAAGCTCAGGATGTCAGGGAAGG...CCTGCCTGGGTCTCTCCAGGCTTTCCTCCACATCTGAGCTAGTGGAGGGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGTGATGCTTGATTGTACCCAGCCTCTGGGTCAGGCTCCCAGGTCAGGCTGCCACAGGGGAGAAGGCTaGCCAGCCCAGACTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: KVMLDCTQPLGQAPRSGCHRGEG*PAQTGR Trigger: TCTCCCAGTCTGGGCTGGGCAGCCTTCTCCCCTGTG...GCAGCCTGACCTGGGAGCCTGACCCAGAGGCTGGGTACAATCAAGCATCACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | TTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCCCTAGTAAGCACCAGCGTGCCTaGGGGCTGTGTCACCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LTQSPRTAGWRSVYQCPSKHQRA*GLCHQA Trigger: TGCCTGGTGACACAGCCCTCAGGCACGCTGGTGCTT...ACTAGGGCACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTTTGCGGAGCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGCGCTTGAAGGCCAGGTaGAGCCGGTTCCCAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: WFAEHVLSCMPLPPLAQMRLKAR*SRFPTR Trigger: CCTGGTTGGGAACCGGCTGCACCTGGCCTTCAAGCG...CATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGTGTCACCAGGCAAGGACAGGGAAGCAGTCACACAGGACATCCACTGGGGGGTACAGGAGACAATaGCACGGCAGCAGAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GLCHQARTGKQSHRTSTGGYRRQ*HGSRGP Trigger: AGGACCTCTGCTGCCGTGCCATTGTCTCCTGTACCC...CCCAGTGGATGTCCTGTGTGACTGCTTCCCTGTCCTTGCCTGGTGACACAGCCC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR TCA 90 bp | TCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAAAGCACCAGCGTGCCTaGGGGCTGTGTCACCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SQVAQASESLRRGLVFQRKHQRA*GLCHQA Trigger: TGCCTGGTGACACAGCCCTCAGGCACGCTGGTGCTT...TCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTAAGCGGCCGTGCATCATaGCAGCGTTCATGCCGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LPTGIDSISQNSRLAQRLSGRAS*QRSCRW Trigger: CCAACGGCATGAACGCTGTCATGATGCACGGCCGCT...TAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGCGGAGCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGTGGCACCAGCAGCCCTGCTaGCTGGTTTGCGGAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: FAEHVLSCMPLPPLAQMWHQQPC*LVCGAC Trigger: ACATGCTCCGCAAACCAGGCAGCAGGGCTGCTGGTG...CCACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACACCAGCAGCCCTGCTaGCTGGTTTGCGGAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: LPTGIDSISQNSRLAQRLHQQPC*LVCGAC Trigger: ACATGCTCCGCAAACCAGGCAGCAGGGCTGCTGGTG...TAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTAAGTTGCTCAGGCCAGTaGGTCCCTAAGGAGGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LPTGIDSISQNSRLAQRLSCSGQ*VPKEGL Trigger: AAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACT...TAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTTTGCGGAGCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGTTATGGCCAGGGCCCTaGGGGCAGGAGGTAGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: WFAEHVLSCMPLPPLAQMLWPGP*GQEVEL Trigger: TAACTCTACCTCCTGCCCTCAGGGCCCTGGCCATAA...CATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGTTATGGCCAGGGCCCTaGGGGCAGGAGGTAGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: TGIDSISQNSRLAQRLPVLWPGP*GQEVEL Trigger: TAACTCTACCTCCTGCCCTCAGGGCCCTGGCCATAA...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGCTTATCAGGCAGTTCCCACAACCATAGCCCCGTCCCTCCCTACAGGCGCTCAGAGCTCATCCTaGGAACAGGAAGGGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: AAAYQAVPTTIAPSLPTGAQSSS*EQEGLF Trigger: AAAGAGCCCTTCCTGTTCTCAGGATGAGCTCTGAGC...GCCTGTAGGGAGGGACGGGGCTATGGTTGTGGGAACTGCCTGATAAGCAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTTGTGTAGCCAAGTCTTCCTGCACACAGCAGGGCCTAGCGCATGGTCAGGAGAGCATGTTCTCTCCTaGATGCCCCTCCCTCCACTA | + |
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Preference number: 2 (lower is better) Translates to: GLCSQVFLHTAGPSAWSGEHVLS*MPLPPL Trigger: TAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTC...TCCTGACCATGCGCTAGGCCCTGCTGTGTGCAGGAAGACTTGGCTACACAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | GGAATAGTGGAGTCCACAGCAGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCCACCAGCAGCCCTGCTaGCTGGTTTGCGGAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: GIVESTAASVVLMVCTQAHQQPC*LVCGAC Trigger: ACATGCTCCGCAAACCAGGCAGCAGGGCTGCTGGTG...GGCCTGCGTGCACACCATCAACACTACACTTGCTGCTGTGGACTCCACTATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | GCGGAACCCATGTGTCCCGCTAGGAGATCTTGCAGTTGCTCCGAGAGCAGTTCTTGCTCCGTTGGAACTTaGCGCTTGAAGGCCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: AEPMCPARRSCSCSESSSCSVGT*RLKARC Trigger: GCACCTGGCCTTCAAGCGGCAAGTTCCAACGGAGCA...AGAACTGCTCTCGGAGCAACTGCAAGATCTCCTAGCGGGACACATGGGTTCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGTGTAGCCAAGTCTTCCTGCACACAGCAGGGCCTAGCGCATGGTCAGGATACACTGTTCCCCAGTaGCCTCTGAGCAACACCCAG | + |
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Preference number: 2 (lower is better) Translates to: GLCSQVFLHTAGPSAWSGYTVPQ*PLSNTQ Trigger: CTGGGTGTTGCTCAGAGGCCACTGGGGAACAGTGTA...TCCTGACCATGCGCTAGGCCCTGCTGTGTGCAGGAAGACTTGGCTACACAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | TTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCCCTAGTACACAGGACATCCACTaGGGACAGCATCCCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: LTQSPRTAGWRSVYQCPSTQDIH*GQHPHR Trigger: CCTGTGGGGATGCTGTCCCCAGTGGATGTCCTGTGT...ACTAGGGCACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGCGGAGCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGTGGGTGGGGTTTCCCAGGTaGATCAACGGCTCTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: FAEHVLSCMPLPPLAQMWVGFPR*INGSSP Trigger: AGGAGAAGAGCCGTTGATGCACCTGGGAAACCCCAC...CCACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGGAGCATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCAGCGGCAGCAGAGGTCCTaGAGGCTGAAAACTCGATTG | + |
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Preference number: 2 (lower is better) Translates to: EEEHCGGTVHGFTSCSGQRQQRS*RLKTRL Trigger: CAATCGAGTTTTCAGCCTGCAGGACCTCTGCTGCCG...CTGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCCCGCTAGGAGATCTTaGAGTTGCTCCGAGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: TGIDSISQNSRLAQRLPVPARRS*SCSESS Trigger: ACTGCTCTCGGAGCAACTGCAAGATCTCCTAGCGGG...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAGTGTCAATGTGGAGGAAAGCCTaGAGAGACCCAGGCAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: VAQASESLRRGLVFQRVSMWRKA*RDPGRV Trigger: AACCCTGCCTGGGTCTCTCCAGGCTTTCCTCCACAT...TGACACTCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | TCCATGGCTTCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTACACTGTTCCCCAGTaGCCTCTGAGCAACACCCAG | + |
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Preference number: 2 (lower is better) Translates to: SMASQVAQASESLRRGLVYTVPQ*PLSNTQ Trigger: CTGGGTGTTGCTCAGAGGCCACTGGGGAACAGTGTA...CACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGAAGCCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | TTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCCCTAGTTACACTGTTCCCCAGTaGCCTCTGAGCAACACCCAG | + |
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Preference number: 2 (lower is better) Translates to: LTQSPRTAGWRSVYQCPSYTVPQ*PLSNTQ Trigger: CTGGGTGTTGCTCAGAGGCCACTGGGGAACAGTGTA...ACTAGGGCACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | TCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAACACAGGACATCCACTaGGGACAGCATCCCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: SQVAQASESLRRGLVFQRTQDIH*GQHPHR Trigger: CCTGTGGGGATGCTGTCCCCAGTGGATGTCCTGTGT...TCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGGAGCATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCAGGTACAGAACCTTCCCTaGCCCGATGTGTCCCATAGC | + |
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Preference number: 2 (lower is better) Translates to: EEEHCGGTVHGFTSCSGQVQNLP*PDVSHS Trigger: GCTATGGGACACATCGGGCCAGGGAAGGTTCTGTAC...CTGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR TCA 90 bp | TTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCCCTAGTACTGGTGGGGAAAGGTaGTGCTTGATTGTACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LTQSPRTAGWRSVYQCPSTGGER*CLIVPS Trigger: GCTGGGTACAATCAAGCATCACCTTTCCCCACCAGT...ACTAGGGCACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGCGGAGCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGTGGCATGCAGTTCTTCTCTaGATAGGCTCTGGCCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: FAEHVLSCMPLPPLAQMWHAVLL*IGSGLL Trigger: GAGCAGGCCAGAGCCTATGCAGAGAAGAACTGCATG...CCACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTGCGGAGCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGTGGATCTTCTCCATGCCATaGCGCATGAGCACGATACGG | + |
|
Preference number: 2 (lower is better) Translates to: FAEHVLSCMPLPPLAQMWIFSMP*RMSTIR Trigger: CCGTATCGTGCTCATGCGGCATGGCATGGAGAAGAT...CCACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTTGCGGAGCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGAGCTTGTCGATGAGGTaGACAGGGGTACAGGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: WFAEHVLSCMPLPPLAQMSLSMR*TGVQET Trigger: TGTCTCCTGTACCCCTGTGCACCTCATCGACAAGCT...CATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTATTATGGCCAGGGCCCTaGGGGCAGGAGGTAGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: ASVVLMVCTQANPGPQSLLWPGP*GQEVEL Trigger: TAACTCTACCTCCTGCCCTCAGGGCCCTGGCCATAA...TAGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGAGAGGAGGAGCATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCCCTCCCTACAGGCATTaGCTCAATCTCCCAGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: TGRGGALWGNSPWLHKLLPPYRH*LNLPEQ Trigger: CTGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAGG...GAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTCTCCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGGAGCATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCAGCCCTTGAGTAGGACCTaGAGATGGTACAGAACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: EEEHCGGTVHGFTSCSGQPLSRT*RWYRTF Trigger: GAAGGTTCTGTACCATCTTCAGGTCCTACTCAAGGG...CTGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTGCGCTGTGCACCCCTTaGGTAGGACCTGAAGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: SKCSVDGVHAGQSRSSKSALCTP*VGPEDG Trigger: ACCATCTTCAGGTCCTACTCAAGGGGTGCACAGCGC...AGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTGAGCATGTTCTCTCCTaGATGCCCCTCCCTCCACTA | + |
|
Preference number: 2 (lower is better) Translates to: AASVVLMVCTQANPGPQSEHVLS*MPLPPL Trigger: TAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTC...ACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTCCCTGCTGCCTGGTTTaGGGAGCATGTTCTCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SKCSVDGVHAGQSRSSKSPCCLV*GACSLL Trigger: CAGGAGAGAACATGCTCCGCAAACCAGGCAGCAGGG...AGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTAACACAGGACATCCACTaGGGACAGCATCCCCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: ASVVLMVCTQANPGPQSLTQDIH*GQHPHR Trigger: CCTGTGGGGATGCTGTCCCCAGTGGATGTCCTGTGT...TAGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCCCTAGTGCATCCAGGCTTCCCTaGCAGCCCTTTAAAAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: LTQSPRTAGWRSVYQCPSASRLP*QPFKNV Trigger: TACATTTTTAAAGGGCTGTCAGGGAAGCCTGGATGC...ACTAGGGCACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR TCA 90 bp | GCGGAACCCATGTGTCCCGCTAGGAGATCTTGCAGTTGCTCCGAGAGCAGTTCTGCATCCAGGCTTCCCTaGCAGCCCTTTAAAAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: AEPMCPARRSCSCSESSSASRLP*QPFKNV Trigger: TACATTTTTAAAGGGCTGTCAGGGAAGCCTGGATGC...AGAACTGCTCTCGGAGCAACTGCAAGATCTCCTAGCGGGACACATGGGTTCCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGGCATCCAGGCTTCCCTaGCAGCCCTTTAAAAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: TGIDSISQNSRLAQRLPVASRLP*QPFKNV Trigger: TACATTTTTAAAGGGCTGTCAGGGAAGCCTGGATGC...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGCTTATCAGGCAGTTCCCACAACCATAGCCCCGTCCCTCCCTACAGGCTATAGTAAACATCACTaGAAGGGCCAGGGCACAATA | + |
|
Preference number: 2 (lower is better) Translates to: AAAYQAVPTTIAPSLPTGYSKHH*KGQGTI Trigger: TATTGTGCCCTGGCCCTTTCAGTGATGTTTACTATA...GCCTGTAGGGAGGGACGGGGCTATGGTTGTGGGAACTGCCTGATAAGCAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGTGTCACCAGGCAAGGACAGGGAAGCAGTCACACAGGACATCCACTGGGTATAGTAAACATCACTaGAAGGGCCAGGGCACAATA | + |
|
Preference number: 2 (lower is better) Translates to: GLCHQARTGKQSHRTSTGYSKHH*KGQGTI Trigger: TATTGTGCCCTGGCCCTTTCAGTGATGTTTACTATA...CCCAGTGGATGTCCTGTGTGACTGCTTCCCTGTCCTTGCCTGGTGACACAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCCTCCCTACAGGCATTaGCTCAATCTCCCAGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: AASVVLMVCTQANPGPQSPPYRH*LNLPEQ Trigger: CTGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAGG...ACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTACCGGGGAACACCAGGTaGATGCTCATCGATCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: ASVVLMVCTQANPGPQSLPGNTR*MLIDLL Trigger: AAGGAGATCGATGAGCATGCACCTGGTGTTCCCCGG...TAGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTAATGTGGAGGAAAGCCTaGAGAGACCCAGGCAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ASVVLMVCTQANPGPQSLMWRKA*RDPGRV Trigger: AACCCTGCCTGGGTCTCTCCAGGCTTTCCTCCACAT...TAGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTTACACTGTTCCCCAGTaGCCTCTGAGCAACACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SKCSVDGVHAGQSRSSKSYTVPQ*PLSNTQ Trigger: CTGGGTGTTGCTCAGAGGCCACTGGGGAACAGTGTA...AGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | GGAATAGTGGAGTCCACAGCAGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCCAACAGCAACAGGACTaGTGGGGAAAGGTGATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GIVESTAASVVLMVCTQAQQQQD*WGKVML Trigger: AAGCATCACCTTTCCCCACCAGTCCTGTTGCTGTTG...GGCCTGCGTGCACACCATCAACACTACACTTGCTGCTGTGGACTCCACTATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTTGTGTAGCCAAGTCTTCCTGCACACAGCAGGGCCTAGCGCATGGTCAGGATATAGTAAACATCACTaGAAGGGCCAGGGCACAATA | + |
|
Preference number: 2 (lower is better) Translates to: GLCSQVFLHTAGPSAWSGYSKHH*KGQGTI Trigger: TATTGTGCCCTGGCCCTTTCAGTGATGTTTACTATA...TCCTGACCATGCGCTAGGCCCTGCTGTGTGCAGGAAGACTTGGCTACACAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTAACTGGTGGGGAAAGGTaGTGCTTGATTGTACCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: ASVVLMVCTQANPGPQSLTGGER*CLIVPS Trigger: GCTGGGTACAATCAAGCATCACCTTTCCCCACCAGT...TAGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | TGCACGCAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCAATGTGGAGGAAAGCCTaGAGAGACCCAGGCAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: CTQANPGPQSLYHSIAIPMWRKA*RDPGRV Trigger: AACCCTGCCTGGGTCTCTCCAGGCTTTCCTCCACAT...TGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTGCGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | TCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGATTTTTCCTATTCAGATaGGCTCTGGGAGACCCGATG | + |
|
Preference number: 2 (lower is better) Translates to: SQVAQASESLRRGLVFQRFFLFR*ALGDPM Trigger: CATCGGGTCTCCCAGAGCCCATCTGAATAGGAAAAA...TCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTACCAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACCCTTCCCTGACATCCTaGGCTTCCCCAACGGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: VYQCPSNIHGKMILGNVHPSLTS*ASPTAD Trigger: ATCAGCCGTTGGGGAAGCTCAGGATGTCAGGGAAGG...GTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTGGTAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | TGCACGCAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCAACTGGTGGGGAAAGGTaGTGCTTGATTGTACCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: CTQANPGPQSLYHSIAIPTGGER*CLIVPS Trigger: GCTGGGTACAATCAAGCATCACCTTTCCCCACCAGT...TGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTGCGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | AAATGGAGGCTCCAAAGCTCTGGATTATTTTTCCTATTCAGATGGGCTCTGGGATCTGGAGTCCAGGACTaGCTCACCCCTGGTCCCGTA | + |
|
Preference number: 2 (lower is better) Translates to: KWRLQSSGLFFLFRWALGSGVQD*LTPGPV Trigger: TACGGGACCAGGGGTGAGCCAGTCCTGGACTCCAGA...TCCCAGAGCCCATCTGAATAGGAAAAATAATCCAGAGCTTTGGAGCCTCCATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGGTCCTGCCCAGCCCAGACTaGGAGAGGAGGAGCATTGTG | + |
|
Preference number: 2 (lower is better) Translates to: CPSNIHGKMILGNVHLEVLPSPD*ERRSIV Trigger: CACAATGCTCCTCCTCTCCCAGTCTGGGCTGGGCAG...GACCTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTCAGCAACAGGACTGGTaGGGAAAGGTGATGCTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SKCSVDGVHAGQSRSSKSQQQDW*GKVMLD Trigger: ATCAAGCATCACCTTTCCCCACCAGTCCTGTTGCTG...AGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR CAA 90 bp | ATGGCTTCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTaGGTGTTCCAGAGAGTGTCACTAAGAAACAGGTCAAAGAGATTC | + |
|
Preference number: 2 (lower is better) Translates to: MASQVAQASESLRRG*VFQRVSLRNRSKRF Trigger: GAATCTCTTTGACCTGTTTCTTAGTGACACTCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGAAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGAGTTGCTCAGGCCAGTaGGTCCCTAAGGAGGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: QCPSNIHGKMILGNVHLESCSGQ*VPKEGL Trigger: AAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACT...CTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTACCAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACGAGCATGTTCTCTCCTaGATGCCCCTCCCTCCACTA | + |
|
Preference number: 2 (lower is better) Translates to: VYQCPSNIHGKMILGNVHEHVLS*MPLPPL Trigger: TAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTC...GTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTGGTAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| 3UTR-3UTR GCA 90 bp | CCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGGTCCCCGAGCATGTTCTCTCCTaGATGCCCCTCCCTCCACTA | + |
|
Preference number: 2 (lower is better) Translates to: PSNIHGKMILGNVHLEVPEHVLS*MPLPPL Trigger: TAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTC...GGGGACCTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTACCAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACGTGGGGTTTCCCAGGTaGATCAACGGCTCTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VYQCPSNIHGKMILGNVHVGFPR*INGSSP Trigger: AGGAGAAGAGCCGTTGATGCACCTGGGAAACCCCAC...GTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTGGTAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGGTCCCCATGTGGAGGAAAGCCTaGAGAGACCCAGGCAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: PSNIHGKMILGNVHLEVPMWRKA*RDPGRV Trigger: AACCCTGCCTGGGTCTCTCCAGGCTTTCCTCCACAT...GGGGACCTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTGAAAAGGACTTGAGGTaGCTTTTGATGGTGACAGGT | + |
|
Preference number: 2 (lower is better) Translates to: AASVVLMVCTQANPGPQSEKDLR*LLMVTG Trigger: ACCTGTCACCATCAAAAGCCACCTCAAGTCCTTTTC...ACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR CAA 90 bp | AACAAAGAACCAGGAATAGTGGAGTCCACAGCAGCAAGTGTAGTGTaGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTATAC | + |
|
Preference number: 2 (lower is better) Translates to: NKEPGIVESTAASVV*MVCTQANPGPQSLY Trigger: GTATAGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCTGCTGTGGACTCCACTATTCCTGGTTCTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTACCAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACACTGGTGGGGAAAGGTaGTGCTTGATTGTACCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VYQCPSNIHGKMILGNVHTGGER*CLIVPS Trigger: GCTGGGTACAATCAAGCATCACCTTTCCCCACCAGT...GTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTGGTAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTTATAGTAAACATCACTaGAAGGGCCAGGGCACAATA | + |
|
Preference number: 2 (lower is better) Translates to: SKCSVDGVHAGQSRSSKSYSKHH*KGQGTI Trigger: TATTGTGCCCTGGCCCTTTCAGTGATGTTTACTATA...AGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGGCAGTCCAGAAATGGAGGCTCCAAAGCTCTGGATTATTTTTCCTATTCAGGATCAGGGGCCAATATaGAGCAGCAGACTCCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: IGSPEMEAPKLWIIFPIQDQGPI*SSRLLP Trigger: GGGAAGGAGTCTGCTGCTCCATATTGGCCCCTGATC...CTGAATAGGAAAAATAATCCAGAGCTTTGGAGCCTCCATTTCTGGACTGCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR CCA 72 bp | GGGAGCCTGGCTCACTTCCAGTCTGGAGTCCAGGACTaGCTCACCCCTGGTCCCGTAGCACCAGCAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSLAHFQSGVQD*LTPGPVAPAAL Trigger: CAGGGCTGCTGGTGCTACGGGACCAGGGGTGAGCCAGTCCTGGACTCCAGACTGGAAGTGAGCCAGGCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR CCA 72 bp | CACCCCTGGTCCCGTAGCACCAGCAGCCCTGCTGCCTaGTTTGCGGAGCATGTTCTCTCCTGCATGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HPWSRSTSSPAA*FAEHVLSCMPL Trigger: GAGGGGCATGCAGGAGAGAACATGCTCCGCAAACCAGGCAGCAGGGCTGCTGGTGCTACGGGACCAGGGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR GCA 72 bp | ACCCAGCCTCTGGGTCAGGCTCCCAGGTCAGGCTGCTaGTTATCAGGCAGTTCCCACAACCATAGCCCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: TQPLGQAPRSGC*LSGSSHNHSPV Trigger: GACGGGGCTATGGTTGTGGGAACTGCCTGATAAGCAGCAGCCTGACCTGGGAGCCTGACCCAGAGGCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR CCA 72 bp | GGCAAGGACAGGGAAGCAGTCACACAGGACATCCACTaGGGACAGCATCCCCACAGGGGAGAAGGCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GKDREAVTQDIH*GQHPHRGEGCP Trigger: TGGGCAGCCTTCTCCCCTGTGGGGATGCTGTCCCCAGTGGATGTCCTGTGTGACTGCTTCCCTGTCCTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR TCA 72 bp | CCCTCCTTCCCTGACATCCTGAGCTTCCCCAACGGCTaGTGTGGCTATGAGGGGCATCCAGGCTTCCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PSFPDILSFPNG*CGYEGHPGFPD Trigger: GTCAGGGAAGCCTGGATGCCCCTCATAGCCACATCAGCCGTTGGGGAAGCTCAGGATGTCAGGGAAGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR GCA 72 bp | TCCTGCACACAGCAGGGCCTAGCGCATGGTCAGGAGTaGTCCAGCGTAAGCCCCAAGTCTGAACAGGCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SCTQQGLAHGQE*SSVSPKSEQAE Trigger: TTCCGCCTGTTCAGACTTGGGGCTTACGCTGGAGCACTCCTGACCATGCGCTAGGCCCTGCTGTGTGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR GCA 72 bp | AGCCCTGCTGCCTGGTTTGCGGAGCATGTTCTCTCCTaGATGCCCCTCCCTCCACTAGCTCAGATGTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPAAWFAEHVLS*MPLPPLAQMWR Trigger: CCTCCACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAACCAGGCAGCAGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR GCA 72 bp | TGTACCCAGCCTCTGGGTCAGGCTCCCAGGTCAGGCTaGTGCTTATCAGGCAGTTCCCACAACCATAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CTQPLGQAPRSG*CLSGSSHNHSP Trigger: GGGGCTATGGTTGTGGGAACTGCCTGATAAGCAGCAGCCTGACCTGGGAGCCTGACCCAGAGGCTGGGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR GCA 72 bp | GCGGAACCCATGTGTCCCGCTAGGAGATCTTGCAGTTaGTCCGAGAGCAGTTCTGAGGTGGGCTCTGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AEPMCPARRSCS*SESSSEVGSEG Trigger: CCCCTCAGAGCCCACCTCAGAACTGCTCTCGGAGCAACTGCAAGATCTCCTAGCGGGACACATGGGTTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR CCA 72 bp | CTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGTaGAGGAAAGCCTGGAGAGACCCAGGCAGGGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSCMPLPPLAQM*RKAWRDPGRVV Trigger: CACAACCCTGCCTGGGTCTCTCCAGGCTTTCCTCCACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR CCA 72 bp | GGCTGCCCAGCCCAGACTGGGAGAGGAGGAGCATTGTaGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCPAQTGRGGAL*GNSPWLHKLLR Trigger: CCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTCTCCCAGTCTGGGCTGGGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTGCTTATCAGGCAGTTCCCACAACCATAGCCCCGTCCCTCCCTACAGGCAAGGACTCAATGACGTaGAAGTTGCACAGGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AAAYQAVPTTIAPSLPTGKDSMT*KLHRGL Trigger: CAGCCCCCTGTGCAACTTCAACGTCATTGAGTCCTT...GCCTGTAGGGAGGGACGGGGCTATGGTTGTGGGAACTGCCTGATAAGCAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR CCA 72 bp | GGAGATCTTGCAGTTGCTCCGAGAGCAGTTCTGAGGTaGGCTCTGAGGGGGCCGGATGGACTTAGACCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GDLAVAPRAVLR*ALRGPDGLRPL Trigger: AAGAGGTCTAAGTCCATCCGGCCCCCTCAGAGCCCACCTCAGAACTGCTCTCGGAGCAACTGCAAGATCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGTCCCTAAGGAGGGGCTaGGTGTTCCAGAGAGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TGIDSISQNSRLAQRLPVSLRRG*VFQRVS Trigger: TGACACTCTCTGGAACACCAAGCCCCTCCTTAGGGA...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTGATGCTTGATTGTACCCAGCCTCTGGGTCAGGCTCCCAGGTCAGGCTGCACAGCGTTCATGCCGTaGGCCATGGAAAAGGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: KVMLDCTQPLGQAPRSGCTAFMP*AMEKDL Trigger: CAAGTCCTTTTCCATGGCCAACGGCATGAACGCTGT...GCAGCCTGACCTGGGAGCCTGACCCAGAGGCTGGGTACAATCAAGCATCACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR TCA 72 bp | TCAACAGCAACAGGACTGGTGGGGAAAGGTGATGCTTaGTTGTACCCAGCCTCTGGGTCAGGCTCCCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: STATGLVGKGDA*LYPASGSGSQV Trigger: GACCTGGGAGCCTGACCCAGAGGCTGGGTACAATCAAGCATCACCTTTCCCCACCAGTCCTGTTGCTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTTGCGGAGCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGCCCTCCCTACAGGCATaGACTCAATCTCCCAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: WFAEHVLSCMPLPPLAQMPSLQA*TQSPRT Trigger: TGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAGGG...CATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR TCA 72 bp | GGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCAGTaGGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GTVHGFTSCSGQ*VPKEGLGVPES Trigger: ACTCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR TCA 72 bp | GTCTCTGTCAACAGCAACAGGACTGGTGGGGAAAGGTaGTGCTTGATTGTACCCAGCCTCTGGGTCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSVNSNRTGGER*CLIVPSLWVRL Trigger: GAGCCTGACCCAGAGGCTGGGTACAATCAAGCATCACCTTTCCCCACCAGTCCTGTTGCTGTTGACAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCCCTAGTTCAAAGGACCAACGGTaGGTGATGTCGTACACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LTQSPRTAGWRSVYQCPSSKDQR*VMSYTR Trigger: TCTGGTGTACGACATCACCAACCGTTGGTCCTTTGA...ACTAGGGCACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAGTGTCATCAATGACGTTGAAGTaGCACAGGGGGCTGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VAQASESLRRGLVFQRVSSMTLK*HRGLTS Trigger: TGAAGTCAGCCCCCTGTGCAACTTCAACGTCATTGA...TGACACTCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCACGCAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCAGACCTCTTAAGGCTGTaGCCCTTGCTGCCACTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CTQANPGPQSLYHSIAIPDLLRL*PLLPLP Trigger: GGGCAGTGGCAGCAAGGGCAACAGCCTTAAGAGGTC...TGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTGCGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAAGGCTGAAAACTCGATaGGGTCTCCAGATCTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SQVAQASESLRRGLVFQRRLKTR*GLQIFS Trigger: GGAGAAGATCTGGAGACCCAATCGAGTTTTCAGCCT...TCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR TCA 72 bp | GTAGCCCCGGCTGGAGATGTGTATAGTAAACATCACTaGAAGGGCCAGGGCACAATAGGAGGGATTAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VAPAGDVYSKHH*KGQGTIGGISG Trigger: CCCACTAATCCCTCCTATTGTGCCCTGGCCCTTTCAGTGATGTTTACTATACACATCTCCAGCCGGGGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR GCA 72 bp | TCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTaGCCTAGTAACATCCATGGTAAGATGATCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPRTAGWRSVYQ*PSNIHGKMILG Trigger: TCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR GCA 72 bp | AAAACTCGATTGGGTCTCCAGATCTTCTCCATGCCATaGCGCATGAGCACGATACGGGAGAGCTCAGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KTRLGLQIFSMP*RMSTIRESSVK Trigger: CTTCACTGAGCTCTCCCGTATCGTGCTCATGCGGCATGGCATGGAGAAGATCTGGAGACCCAATCGAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGGTCCCCGGGAGAGGAGGAGCATaGTGGGGGAACAGTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: PSNIHGKMILGNVHLEVPGRGGA*WGNSPW Trigger: CCATGGACTGTTCCCCCACAATGCTCCTCCTCTCCC...GGGGACCTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTCCCTCCCTACAGGCATaGACTCAATCTCCCAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: SKCSVDGVHAGQSRSSKSPSLQA*TQSPRT Trigger: TGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAGGG...AGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAAAGCTAGACCAGACGTaGAGACAGGTAAATAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: SQVAQASESLRRGLVFQRKLDQT*RQVNNP Trigger: TGGGTTATTTACCTGTCTCAACGTCTGGTCTAGCTT...TCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGGTCACAGGTAGTGGGAGCTaGTCGATGAGGTGCACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CPSNIHGKMILGNVHLEVTGSGS*SMRCTG Trigger: CCCTGTGCACCTCATCGACAAGCTCCCACTACCTGT...GACCTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR CCA 72 bp | TTCCAGAGAAAAGGTCTCTGTCAACAGCAACAGGACTaGTGGGGAAAGGTGATGCTTGATTGTACCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: FQRKGLCQQQQD*WGKVMLDCTQP Trigger: AGGCTGGGTACAATCAAGCATCACCTTTCCCCACCAGTCCTGTTGCTGTTGACAGAGACCTTTTCTCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR CCA 72 bp | CACATAGGCAGTCCAGAAATGGAGGCTCCAAAGCTCTaGATTATTTTTCCTATTCAGATGGGCTCTGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HIGSPEMEAPKL*IIFPIQMGSGR Trigger: TCTCCCAGAGCCCATCTGAATAGGAAAAATAATCCAGAGCTTTGGAGCCTCCATTTCTGGACTGCCTATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR CCA 72 bp | AAAGCTCTGGATTATTTTTCCTATTCAGATGGGCTCTaGGAGACCCGATGTCCAGATGTCAAAATACTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KALDYFSYSDGL*ETRCPDVKILQ Trigger: CTGAAGTATTTTGACATCTGGACATCGGGTCTCCCAGAGCCCATCTGAATAGGAAAAATAATCCAGAGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGGAGTCCAGGACTGGCTCACCCCTGGTCCCGTAGCACCAGCAGCCCTGCTGCCCCCGGCCCCACTTaGCAGGGAGTAGGAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VWSPGLAHPWSRSTSSPAAPGPT*QGVGAA Trigger: GGCCGCTCCTACTCCCTGGCAAGTGGGGCCGGGGGC...AGCAGGGCTGCTGGTGCTACGGGACCAGGGGTGAGCCAGTCCTGGACTCCAGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCCGTAGCACCAGCAGCCCTGCTGCCTGGTTTGCGGAGCATGTTCTCTCCTTGCCCTTGCTGCCACTaGCCCCGGCCCCACTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPVAPAALLPGLRSMFSPCPCCH*PRPHLP Trigger: TGGCAAGTGGGGCCGGGGGCAGTGGCAGCAAGGGCA...AGGAGAGAACATGCTCCGCAAACCAGGCAGCAGGGCTGCTGGTGCTACGGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGTGTCACCAGGCAAGGACAGGGAAGCAGTCACACAGGACATCCACTGGGGGCTGTTGCCCTTGCTaGCACTGCCCCCGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLCHQARTGKQSHRTSTGGCCPC*HCPRPH Trigger: GTGGGGCCGGGGGCAGTGGCAGCAAGGGCAACAGCC...CCCAGTGGATGTCCTGTGTGACTGCTTCCCTGTCCTTGCCTGGTGACACAGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGGGCTGTTGCCCTTGCTaGCACTGCCCCCGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGIDSISQNSRLAQRLPVGCCPC*HCPRPH Trigger: GTGGGGCCGGGGGCAGTGGCAGCAAGGGCAACAGCC...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTGGCTGTTGCCCTTGCTaGCACTGCCCCCGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AASVVLMVCTQANPGPQSGCCPC*HCPRPH Trigger: GTGGGGCCGGGGGCAGTGGCAGCAAGGGCAACAGCC...ACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCGCTTGAAGGCCAGGTaGAGCCGGTTCCCAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGIDSISQNSRLAQRLPVRLKAR*SRFPTR Trigger: CCTGGTTGGGAACCGGCTGCACCTGGCCTTCAAGCG...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCTACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTAGTGGGAGCTTGTCGATaGGGTGCACAGGGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPTGIDSISQNSRLAQRLVGACR*GAQGYR Trigger: CCTGTACCCCTGTGCACCTCATCGACAAGCTCCCAC...TAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GGAATAGTGGAGTCCACAGCAGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCCGCTTGAAGGCCAGGTaGAGCCGGTTCCCAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIVESTAASVVLMVCTQARLKAR*SRFPTR Trigger: CCTGGTTGGGAACCGGCTGCACCTGGCCTTCAAGCG...GGCCTGCGTGCACACCATCAACACTACACTTGCTGCTGTGGACTCCACTATTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR TCA 90 bp | TCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAAGCGGCCGTGCATCATaGCAGCGTTCATGCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQVAQASESLRRGLVFQRSGRAS*QRSCRW Trigger: CCAACGGCATGAACGCTGTCATGATGCACGGCCGCT...TCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | TTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCCCTAGTTGCTCCGTTGGAACTTaGCGCTTGAAGGCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTQSPRTAGWRSVYQCPSCSVGT*RLKARC Trigger: GCACCTGGCCTTCAAGCGGCAAGTTCCAACGGAGCA...ACTAGGGCACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTGCACACAGCAGGGCCTAGCGCATGGTCAGGAGTGCTCCAGCGTAAGCCATGCAGTTCTTCTCTaGATAGGCTCTGGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSCTQQGLAHGQECSSVSHAVLL*IGSGLL Trigger: GAGCAGGCCAGAGCCTATGCAGAGAAGAACTGCATG...GCTTACGCTGGAGCACTCCTGACCATGCGCTAGGCCCTGCTGTGTGCAGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTGCACACAGCAGGGCCTAGCGCATGGTCAGGAGTGCTCCAGCGTAAGCAGCTTGTCGATGAGGTaGACAGGGGTACAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSCTQQGLAHGQECSSVSSLSMR*TGVQET Trigger: TGTCTCCTGTACCCCTGTGCACCTCATCGACAAGCT...GCTTACGCTGGAGCACTCCTGACCATGCGCTAGGCCCTGCTGTGTGCAGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGGTCCCCGCCCCCGGCCCCACTTaGCAGGGAGTAGGAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSNIHGKMILGNVHLEVPAPGPT*QGVGAA Trigger: GGCCGCTCCTACTCCCTGGCAAGTGGGGCCGGGGGC...GGGGACCTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | TGCACGCAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCATGCCCTTGCTGCCACTaGCCCCGGCCCCACTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CTQANPGPQSLYHSIAIPCPCCH*PRPHLP Trigger: TGGCAAGTGGGGCCGGGGGCAGTGGCAGCAAGGGCA...TGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTGCGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAGGGGAGCCTGGCTCACTTCCAGTCTGGAGTCCAGGACTGGCTCACCCCGTACAGAACCTTCCCTaGCCCGATGTGTCCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKGEPGSLPVWSPGLAHPVQNLP*PDVSHS Trigger: GCTATGGGACACATCGGGCCAGGGAAGGTTCTGTAC...GGGGTGAGCCAGTCCTGGACTCCAGACTGGAAGTGAGCCAGGCTCCCCTTTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAGTGTCAGGGTACAGGAGACAATaGCACGGCAGCAGAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAQASESLRRGLVFQRVSGYRRQ*HGSRGP Trigger: AGGACCTCTGCTGCCGTGCCATTGTCTCCTGTACCC...TGACACTCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR GCA 90 bp | CTCCCTACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCGGGGAACACCAGGTaGATGCTCATCGATCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPTGIDSISQNSRLAQRLPGNTR*MLIDLL Trigger: AAGGAGATCGATGAGCATGCACCTGGTGTTCCCCGG...TAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | TTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCCCTAGTCCGGGGAACACCAGGTaGATGCTCATCGATCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTQSPRTAGWRSVYQCPSPGNTR*MLIDLL Trigger: AAGGAGATCGATGAGCATGCACCTGGTGTTCCCCGG...ACTAGGGCACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GGAATAGTGGAGTCCACAGCAGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCTGCTCCGTTGGAACTTaGCGCTTGAAGGCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GIVESTAASVVLMVCTQACSVGT*RLKARC Trigger: GCACCTGGCCTTCAAGCGGCAAGTTCCAACGGAGCA...GGCCTGCGTGCACACCATCAACACTACACTTGCTGCTGTGGACTCCACTATTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGGAGCATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCATGCTCCGTTGGAACTTaGCGCTTGAAGGCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGGALWGNSPWLHKLLRPCSVGT*RLKARC Trigger: GCACCTGGCCTTCAAGCGGCAAGTTCCAACGGAGCA...TGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTGTGTAGCCAAGTCTTCCTGCACACAGCAGGGCCTAGCGCATGGTCAGGAATCTTCTCCATGCCATaGCGCATGAGCACGATACGG | + |
|
Preference number: 4 (lower is better) Translates to: GLCSQVFLHTAGPSAWSGIFSMP*RMSTIR Trigger: CCGTATCGTGCTCATGCGGCATGGCATGGAGAAGAT...TCCTGACCATGCGCTAGGCCCTGCTGTGTGCAGGAAGACTTGGCTACACAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCGGCAGCAGAGGTCCTaGAGGCTGAAAACTCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: TGIDSISQNSRLAQRLPVRQQRS*RLKTRL Trigger: CAATCGAGTTTTCAGCCTGCAGGACCTCTGCTGCCG...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGTGTCACCAGGCAAGGACAGGGAAGCAGTCACACAGGACATCCACTGGGAGGAGATCTTGCAGTTaGTCCGAGAGCAGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLCHQARTGKQSHRTSTGRRSCS*SESSSE Trigger: CTCAGAACTGCTCTCGGAGCAACTGCAAGATCTCCT...CCCAGTGGATGTCCTGTGTGACTGCTTCCCTGTCCTTGCCTGGTGACACAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGGCTTCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGGTACAGAACCTTCCCTaGCCCGATGTGTCCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SMASQVAQASESLRRGLVVQNLP*PDVSHS Trigger: GCTATGGGACACATCGGGCCAGGGAAGGTTCTGTAC...CACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGAAGCCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTAGTGGGAGCTTGTCGATaGGGTGCACAGGGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASVVLMVCTQANPGPQSLVGACR*GAQGYR Trigger: CCTGTACCCCTGTGCACCTCATCGACAAGCTCCCAC...TAGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGAGCATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCAGCATGCAGTTCTTCTCTaGATAGGCTCTGGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EEEHCGGTVHGFTSCSGQHAVLL*IGSGLL Trigger: GAGCAGGCCAGAGCCTATGCAGAGAAGAACTGCATG...CTGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR GCA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGATCTTCTCCATGCCATaGCGCATGAGCACGATACGG | + |
|
Preference number: 4 (lower is better) Translates to: TGIDSISQNSRLAQRLPVIFSMP*RMSTIR Trigger: CCGTATCGTGCTCATGCGGCATGGCATGGAGAAGAT...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GTCTACCAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTGCCCTTGCTGCCACTaGCCCCGGCCCCACTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VYQCPSNIHGKMILGNVHCPCCH*PRPHLP Trigger: TGGCAAGTGGGGCCGGGGGCAGTGGCAGCAAGGGCA...GTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTGGTAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGGCTTCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGCCCTTGAGTAGGACCTaGAGATGGTACAGAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SMASQVAQASESLRRGLVPLSRT*RWYRTF Trigger: GAAGGTTCTGTACCATCTTCAGGTCCTACTCAAGGG...CACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGAAGCCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGTGGAGGAAAGCAGGAGATCTTGCAGTTaGTCCGAGAGCAGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACSLLHAPPSTSSDVEESRRSCS*SESSSE Trigger: CTCAGAACTGCTCTCGGAGCAACTGCAAGATCTCCT...GCTTTCCTCCACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGTATAGTCTATCCCGTTaGTGTAGGCGTACGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TGIDSISQNSRLAQRLPVYSLSR*CRRTGI Trigger: AATCCCCGTACGCCTACAGCAACGGGATAGACTATA...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTGTACAGAACCTTCCCTaGCCCGATGTGTCCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKCSVDGVHAGQSRSSKSVQNLP*PDVSHS Trigger: GCTATGGGACACATCGGGCCAGGGAAGGTTCTGTAC...AGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTGATGCTTGATTGTACCCAGCCTCTGGGTCAGGCTCCCAGGTCAGGCTGCGAAAAGGACTTGAGGTaGCTTTTGATGGTGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVMLDCTQPLGQAPRSGCEKDLR*LLMVTG Trigger: ACCTGTCACCATCAAAAGCCACCTCAAGTCCTTTTC...GCAGCCTGACCTGGGAGCCTGACCCAGAGGCTGGGTACAATCAAGCATCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR CAA 72 bp | CAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTaGGTGTTCCAGAGAGTGTCACTAAGAAACAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVAQASESLRRG*VFQRVSLRNRS Trigger: TGACCTGTTTCTTAGTGACACTCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026826.14 ENSMUST00000166146.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR TCA 90 bp | CAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCAGAGAAAAGCGGCCGTGCATCATaGCAGCGTTCATGCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QANPGPQSLYHSIAIPEKSGRAS*QRSCRW Trigger: CCAACGGCATGAACGCTGTCATGATGCACGGCCGCT...TTTCTCTGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR TCA 90 bp | GTCTACCAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACAGCGGCCGTGCATCATaGCAGCGTTCATGCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VYQCPSNIHGKMILGNVHSGRAS*QRSCRW Trigger: CCAACGGCATGAACGCTGTCATGATGCACGGCCGCT...GTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTGGTAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR GCA 90 bp | GGAATAGTGGAGTCCACAGCAGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCTATAGTCTATCCCGTTaGTGTAGGCGTACGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GIVESTAASVVLMVCTQAYSLSR*CRRTGI Trigger: AATCCCCGTACGCCTACAGCAACGGGATAGACTATA...GGCCTGCGTGCACACCATCAACACTACACTTGCTGCTGTGGACTCCACTATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR GCA 90 bp | TGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGGTCCGCTTGAAGGCCAGGTaGAGCCGGTTCCCAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSNIHGKMILGNVHLEVRLKAR*SRFPTR Trigger: CCTGGTTGGGAACCGGCTGCACCTGGCCTTCAAGCG...GACCTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTCATGCAGTTCTTCTCTaGATAGGCTCTGGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKCSVDGVHAGQSRSSKSHAVLL*IGSGLL Trigger: GAGCAGGCCAGAGCCTATGCAGAGAAGAACTGCATG...AGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CCA 90 bp | GCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGTGGAGGAAAGCGAAAAGGACTTGAGGTaGCTTTTGATGGTGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ACSLLHAPPSTSSDVEESEKDLR*LLMVTG Trigger: ACCTGTCACCATCAAAAGCCACCTCAAGTCCTTTTC...GCTTTCCTCCACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGCGGAGCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGTGGAAAAGGACTTGAGGTaGCTTTTGATGGTGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VCGACSLLHAPPSTSSDVEKDLR*LLMVTG Trigger: ACCTGTCACCATCAAAAGCCACCTCAAGTCCTTTTC...CACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTCCCTTGAGTAGGACCTaGAGATGGTACAGAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKCSVDGVHAGQSRSSKSPLSRT*RWYRTF Trigger: GAAGGTTCTGTACCATCTTCAGGTCCTACTCAAGGG...AGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR CCA 90 bp | GTCTACCAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACGGGTACAGGAGACAATaGCACGGCAGCAGAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VYQCPSNIHGKMILGNVHGYRRQ*HGSRGP Trigger: AGGACCTCTGCTGCCGTGCCATTGTCTCCTGTACCC...GTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTGGTAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCAGAGAAACGGCAGCAGAGGTCCTaGAGGCTGAAAACTCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: QANPGPQSLYHSIAIPEKRQQRS*RLKTRL Trigger: CAATCGAGTTTTCAGCCTGCAGGACCTCTGCTGCCG...TTTCTCTGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGGTCCCCCGGCAGCAGAGGTCCTaGAGGCTGAAAACTCGATTG | + |
|
Preference number: 4 (lower is better) Translates to: PSNIHGKMILGNVHLEVPRQQRS*RLKTRL Trigger: CAATCGAGTTTTCAGCCTGCAGGACCTCTGCTGCCG...GGGGACCTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | TGCACGCAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCAAGGAGATCTTGCAGTTaGTCCGAGAGCAGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CTQANPGPQSLYHSIAIPRRSCS*SESSSE Trigger: CTCAGAACTGCTCTCGGAGCAACTGCAAGATCTCCT...TGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTGCGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCAGAGAAAATCTTCTCCATGCCATaGCGCATGAGCACGATACGG | + |
|
Preference number: 4 (lower is better) Translates to: QANPGPQSLYHSIAIPEKIFSMP*RMSTIR Trigger: CCGTATCGTGCTCATGCGGCATGGCATGGAGAAGAT...TTTCTCTGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GTCTACCAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACAGCTTGTCGATGAGGTaGACAGGGGTACAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VYQCPSNIHGKMILGNVHSLSMR*TGVQET Trigger: TGTCTCCTGTACCCCTGTGCACCTCATCGACAAGCT...GTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTGGTAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| 3UTR CAA 72 bp | TACTTCAGAAAAAGGGCCAAGGATGTAGCTCAGCCGTaGAACCCTCATCTATTAAGCACGAGGCTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YFRKRAKDVAQP*NPHLLSTRLRA Trigger: AGCTCTGAGCCTCGTGCTTAATAGATGAGGGTTCAACGGCTGAGCTACATCCTTGGCCCTTTTTCTGAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| 3UTR CAA 72 bp | TTGATCCACCGGTCAATGCCATCAAAGGACCAACGGTaGGTGATGTCGTACACCAGAAGGATTCCCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LIHRSMPSKDQR*VMSYTRRIPFV Trigger: AACAAAGGGAATCCTTCTGGTGTACGACATCACCAACCGTTGGTCCTTTGATGGCATTGACCGGTGGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166146.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGGTCCCCCCCTTGAGTAGGACCTaGAGATGGTACAGAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSNIHGKMILGNVHLEVPPLSRT*RWYRTF Trigger: GAAGGTTCTGTACCATCTTCAGGTCCTACTCAAGGG...GGGGACCTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGG 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTTAGAGAGCTTGTCGATGAGGTaGACAGGGGTACAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QCPSNIHGKMILGNVHLESLSMR*TGVQET Trigger: TGTCTCCTGTACCCCTGTGCACCTCATCGACAAGCT...CTCTAAGTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR GCA 90 bp | GTCTACCAGTGCCCTAGTAACATCCATGGTAAGATGATCTTAGGAAACGTGCACTATAGTCTATCCCGTTaGTGTAGGCGTACGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VYQCPSNIHGKMILGNVHYSLSR*CRRTGI Trigger: AATCCCCGTACGCCTACAGCAACGGGATAGACTATA...GTGCACGTTTCCTAAGATCATCTTACCATGGATGTTACTAGGGCACTGGTAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGGAGTCCAGGACTGGCTCACCCCTGGTCCCGTAGCACCAGCAGCCCTGCTTGCCCCCGGCCCCACTaGCCAGGGAGTAGGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VWSPGLAHPWSRSTSSPACPRPH*PGSRSG Trigger: GCCGCTCCTACTCCCTGGCAAGTGGGGCCGGGGGCA...AGCAGGGCTGCTGGTGCTACGGGACCAGGGGTGAGCCAGTCCTGGACTCCAGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGCTTATCAGGCAGTTCCCACAACCATAGCCCCGTCCCTCCCTACAGGCTGCCCCCGGCCCCACTaGCCAGGGAGTAGGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AAAYQAVPTTIAPSLPTGCPRPH*PGSRSG Trigger: GCCGCTCCTACTCCCTGGCAAGTGGGGCCGGGGGCA...GCCTGTAGGGAGGGACGGGGCTATGGTTGTGGGAACTGCCTGATAAGCAGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | GTCTGGAGTCCAGGACTGGCTCACCCCTGGTCCCGTAGCACCAGCAGCCCTGCTACAGGTAGTGGGAGCTaGTCGATGAGGTGCACAGGG | + |
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Preference number: 5 (lower is better) Translates to: VWSPGLAHPWSRSTSSPATGSGS*SMRCTG Trigger: CCCTGTGCACCTCATCGACAAGCTCCCACTACCTGT...AGCAGGGCTGCTGGTGCTACGGGACCAGGGGTGAGCCAGTCCTGGACTCCAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | TCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGATGCCCCCGGCCCCACTaGCCAGGGAGTAGGAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: SQVAQASESLRRGLVFQRCPRPH*PGSRSG Trigger: GCCGCTCCTACTCCCTGGCAAGTGGGGCCGGGGGCA...TCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCTCCACTAGCTCAGATGTGGAGGAAAGCCTGGAGAGACCCAGGCAGGGACCTCTTAAGGCTGTaGCCCTTGCTGCCACTGCCC | + |
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Preference number: 5 (lower is better) Translates to: PLPPLAQMWRKAWRDPGRDLLRL*PLLPLP Trigger: GGGCAGTGGCAGCAAGGGCAACAGCCTTAAGAGGTC...CCTGCCTGGGTCTCTCCAGGCTTTCCTCCACATCTGAGCTAGTGGAGGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | AATAAAGGGGAGCCTGGCTCACTTCCAGTCTGGAGTCCAGGACTGGCTCACCCCCTGCTCCGTTGGAACTaGCCGCTTGAAGGCCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: NKGEPGSLPVWSPGLAHPLLRWN*PLEGQV Trigger: CACCTGGCCTTCAAGCGGCAAGTTCCAACGGAGCAG...GGGGTGAGCCAGTCCTGGACTCCAGACTGGAAGTGAGCCAGGCTCCCCTTTATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | TTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGCCCTAGTCTGCTCCGTTGGAACTaGCCGCTTGAAGGCCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: LTQSPRTAGWRSVYQCPSLLRWN*PLEGQV Trigger: CACCTGGCCTTCAAGCGGCAAGTTCCAACGGAGCAG...ACTAGGGCACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | AAGGTGATGCTTGATTGTACCCAGCCTCTGGGTCAGGCTCCCAGGTCAGGCTGCACAGGTAGTGGGAGCTaGTCGATGAGGTGCACAGGG | + |
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Preference number: 5 (lower is better) Translates to: KVMLDCTQPLGQAPRSGCTGSGS*SMRCTG Trigger: CCCTGTGCACCTCATCGACAAGCTCCCACTACCTGT...GCAGCCTGACCTGGGAGCCTGACCCAGAGGCTGGGTACAATCAAGCATCACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | TCTTCCTGCACACAGCAGGGCCTAGCGCATGGTCAGGAGTGCTCCAGCGTAAGCACAGCGTTCATGCCGTaGGCCATGGAAAAGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: SSCTQQGLAHGQECSSVSTAFMP*AMEKDL Trigger: CAAGTCCTTTTCCATGGCCAACGGCATGAACGCTGT...GCTTACGCTGGAGCACTCCTGACCATGCGCTAGGCCCTGCTGTGTGCAGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | AGAGGAGGAGCATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCAGACCTCTTAAGGCTGTaGCCCTTGCTGCCACTGCCC | + |
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Preference number: 5 (lower is better) Translates to: RGGALWGNSPWLHKLLRPDLLRL*PLLPLP Trigger: GGGCAGTGGCAGCAAGGGCAACAGCCTTAAGAGGTC...TGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | GGGCTGTGTCACCAGGCAAGGACAGGGAAGCAGTCACACAGGACATCCACTGGGTCAAAGGACCAACGGTaGGTGATGTCGTACACCAGA | + |
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Preference number: 5 (lower is better) Translates to: GLCHQARTGKQSHRTSTGSKDQR*VMSYTR Trigger: TCTGGTGTACGACATCACCAACCGTTGGTCCTTTGA...CCCAGTGGATGTCCTGTGTGACTGCTTCCCTGTCCTTGCCTGGTGACACAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | AGAGGAGGAGCATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCAACAGGTAGTGGGAGCTaGTCGATGAGGTGCACAGGG | + |
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Preference number: 5 (lower is better) Translates to: RGGALWGNSPWLHKLLRPTGSGS*SMRCTG Trigger: CCCTGTGCACCTCATCGACAAGCTCCCACTACCTGT...TGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | AATAAAGGGGAGCCTGGCTCACTTCCAGTCTGGAGTCCAGGACTGGCTCACCCCGACTTGAGGTGGCTTTaGATGGTGACAGGTAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: NKGEPGSLPVWSPGLAHPDLRWL*MVTGSG Trigger: CCCACTACCTGTCACCATCAAAAGCCACCTCAAGTC...GGGGTGAGCCAGTCCTGGACTCCAGACTGGAAGTGAGCCAGGCTCCCCTTTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | GTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAGTGTCAAAGGACTCAATGACGTaGAAGTTGCACAGGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: VAQASESLRRGLVFQRVSKDSMT*KLHRGL Trigger: CAGCCCCCTGTGCAACTTCAACGTCATTGAGTCCTT...TGACACTCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | GTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAGTGTCAGACTTGAGGTGGCTTTaGATGGTGACAGGTAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: VAQASESLRRGLVFQRVSDLRWL*MVTGSG Trigger: CCCACTACCTGTCACCATCAAAAGCCACCTCAAGTC...TGACACTCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | GTTTGCGGAGCATGTTCTCTCCTGCATGCCCCTCCCTCCACTAGCTCAGATGTGACAGCGTTCATGCCGTaGGCCATGGAAAAGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: VCGACSLLHAPPSTSSDVTAFMP*AMEKDL Trigger: CAAGTCCTTTTCCATGGCCAACGGCATGAACGCTGT...CACATCTGAGCTAGTGGAGGGAGGGGCATGCAGGAGAGAACATGCTCCGCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGGAGCATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCAGTCAAAGGACCAACGGTaGGTGATGTCGTACACCAGA | + |
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Preference number: 5 (lower is better) Translates to: EEEHCGGTVHGFTSCSGQSKDQR*VMSYTR Trigger: TCTGGTGTACGACATCACCAACCGTTGGTCCTTTGA...CTGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGTCAATGACGTTGAAGTaGCACAGGGGGCTGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: TGIDSISQNSRLAQRLPVSMTLK*HRGLTS Trigger: TGAAGTCAGCCCCCTGTGCAACTTCAACGTCATTGA...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | TCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGTTCCAGAGAAAGGACTCAATGACGTaGAAGTTGCACAGGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SQVAQASESLRRGLVFQRKDSMT*KLHRGL Trigger: CAGCCCCCTGTGCAACTTCAACGTCATTGAGTCCTT...TCTCTGGAACACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTACCAGTGAGGCTGAAAACTCGATaGGGTCTCCAGATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TGIDSISQNSRLAQRLPVRLKTR*GLQIFS Trigger: GGAGAAGATCTGGAGACCCAATCGAGTTTTCAGCCT...CACTGGTAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | TCCATGGCTTCACAAGTTGCTCAGGCCAGTGAGTCCCTAAGGAGGGGCTTGGTGAGGCTGAAAACTCGATaGGGTCTCCAGATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SMASQVAQASESLRRGLVRLKTR*GLQIFS Trigger: GGAGAAGATCTGGAGACCCAATCGAGTTTTCAGCCT...CACCAAGCCCCTCCTTAGGGACTCACTGGCCTGAGCAACTTGTGAAGCCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | CTCCCTACAGGCATTGACTCAATCTCCCAGAACAGCAGGCTGGCGCAGCGTCTAAGGCTGAAAACTCGATaGGGTCTCCAGATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LPTGIDSISQNSRLAQRLRLKTR*GLQIFS Trigger: GGAGAAGATCTGGAGACCCAATCGAGTTTTCAGCCT...TAGACGCTGCGCCAGCCTGCTGTTCTGGGAGATTGAGTCAATGCCTGTAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | AGAGGAGGAGCATTGTGGGGGAACAGTCCATGGCTTCACAAGTTGCTCAGGCCATCAATGACGTTGAAGTaGCACAGGGGGCTGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: RGGALWGNSPWLHKLLRPSMTLK*HRGLTS Trigger: TGAAGTCAGCCCCCTGTGCAACTTCAACGTCATTGA...TGGCCTGAGCAACTTGTGAAGCCATGGACTGTTCCCCCACAATGCTCCTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | ACAGCAGCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAAGGACTCAATGACGTaGAAGTTGCACAGGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TAASVVLMVCTQANPGPQKDSMT*KLHRGL Trigger: CAGCCCCCTGTGCAACTTCAACGTCATTGAGTCCTT...TTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGCTGCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | GCAAGTGTAGTGTTGATGGTGTGCACGCAGGCCAATCCAGGTCCTCAAAGTCTATCAAAGGACCAACGGTaGGTGATGTCGTACACCAGA | + |
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Preference number: 5 (lower is better) Translates to: ASVVLMVCTQANPGPQSLSKDQR*VMSYTR Trigger: TCTGGTGTACGACATCACCAACCGTTGGTCCTTTGA...TAGACTTTGAGGACCTGGATTGGCCTGCGTGCACACCATCAACACTACACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | TGCACGCAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCAGACTTGAGGTGGCTTTaGATGGTGACAGGTAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: CTQANPGPQSLYHSIAIPDLRWL*MVTGSG Trigger: CCCACTACCTGTCACCATCAAAAGCCACCTCAAGTC...TGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTGCGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | CAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCAGAGAAAACAGCGTTCATGCCGTaGGCCATGGAAAAGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: QANPGPQSLYHSIAIPEKTAFMP*AMEKDL Trigger: CAAGTCCTTTTCCATGGCCAACGGCATGAACGCTGT...TTTCTCTGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS-3UTR CAA 90 bp | CAGGCCAATCCAGGTCCTCAAAGTCTATACCATTCTATCGCGATTCCAGAGAAATCAATGACGTTGAAGTaGCACAGGGGGCTGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: QANPGPQSLYHSIAIPEKSMTLK*HRGLTS Trigger: TGAAGTCAGCCCCCTGTGCAACTTCAACGTCATTGA...TTTCTCTGGAATCGCGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026826.14 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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| CDS CCA 72 bp | GCAGTTCTTCTCTGCATAGGCTCTGGCCTGCTCCGTTaGAACTTGCCGCTCATCGATCTCCTTGATCCACCG | + |
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Preference number: 6 (lower is better) Translates to: AVLLCIGSGLLR*NLPLIDLLDPP Trigger: CGGTGGATCAAGGAGATCGATGAGCGGCAAGTTCCAACGGAGCAGGCCAGAGCCTATGCAGAGAAGAACTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164982.8 |
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| CDS TCA 72 bp | TCCACCGGTCAATGCCATCAAAGGACCAACGGTTGGTaGTGTCGTACACCAGAAGGATTCCCTGTGCACCCC | + |
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Preference number: 6 (lower is better) Translates to: STGQCHQRTNGW*CRTPEGFPVHP Trigger: GGGGTGCACAGGGAATCCTTCTGGTGTACGACATCACCAACCGTTGGTCCTTTGATGGCATTGACCGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026826.14 ENSMUST00000164738.2 ENSMUST00000164982.8 ENSMUST00000167018.8 ENSMUST00000167626.8 ENSMUST00000179998.8 |
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