Pregenerated sensors for RAB3IL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024663Ensembl transcript IDs: ENSMUST00000113161.10, ENSMUST00000117641.8, ENSMUST00000121418.8, ENSMUST00000131407.2, ENSMUST00000137637.8, ENSMUST00000144788.8, ENSMUST00000149967.9, ENSMUST00000238672.2
Found 402 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGAAGTCTGGATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTaGTGGCACACTTTAGGAAGAAAGGGCCCAGACTTCCTGGCAACT | + |
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Preference number: 1 (lower is better) Translates to: PEVWMAAQGYVLRLP*WHTLGRKGPDFLAT Trigger: AGTTGCCAGGAAGTCTGGGCCCTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCATCCAGACTTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR CCA 90 bp | GTAGAAGCAGGACAAGTCAGGGGAGTAAGGTCCTCTGTGGGCCTCTaGGTGTTTCCTGGTGGCTTTGTGGTCCTGCATATGGCTGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: VEAGQVRGVRSSVGL*VFPGGFVVLHMAGP Trigger: GGGCCCAGCCATATGCAGGACCACAAAGCCACCAGGAAACACCCAGAGGCCCACAGAGGACCTTACTCCCCTGACTTGTCCTGCTTCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR CCA 90 bp | CCACTGGGGCAGTCTAATGAGGCCACTTGGAAACAGAGTGAGAAATaGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: PLGQSNEATWKQSEK*PQGGAGVPGLEIQP Trigger: TGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGACTGCCCCAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR TCA 90 bp | GATTGTGTGAGGGTACTGGCTACTCAAGGGTCCTCTCCCCAGGGCTaGGCTCCTTGCTCCGAGCACCTTGGTCTTTGGTGCTTTCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: DCVRVLATQGSSPQG*APCSEHLGLWCFLE Trigger: CTCAAGAAAGCACCAAAGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACCCTTGAGTAGCCAGTACCCTCACACAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR TCA 90 bp | GTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTaGAGATGTGGCAGCAAGAGAGCATTGGTAAGCAGCAGGGGATTG | + |
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Preference number: 1 (lower is better) Translates to: VSQGWKSSHPRAAPF*RCGSKRALVSSRGL Trigger: CAATCCCCTGCTGCTTACCAATGCTCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR TCA 90 bp | AGTACACCTGGGCCTCAGGCCAATAGAGAAATCTCTGTGGGCTACTaGCAACCTCTGCCCCAGCCCAGAATCTGCTGCACCTTCCTAACA | + |
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Preference number: 1 (lower is better) Translates to: STPGPQANREISVGY*QPLPQPRICCTFLT Trigger: TGTTAGGAAGGTGCAGCAGATTCTGGGCTGGGGCAGAGGTTGTCAGTAGCCCACAGAGATTTCTCTATTGGCCTGAGGCCCAGGTGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR CCA 90 bp | TTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTaGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGGTGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: LETFALPLGQSNEAT*KQSEKWPQGGAGVP Trigger: TGGGACACCAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR CCA 90 bp | AAGTCCAGGCCAGGCTGTCCTTTTGTCTGTCTCAGGACGGATGGGTaGTACGGGCTCAGAACTGTCTCTACAGCCTGGTTGTTTATCTGT | + |
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Preference number: 1 (lower is better) Translates to: KSRPGCPFVCLRTDG*YGLRTVSTAWLFIC Trigger: ACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAGCCCGTACCACCCATCCGTCCTGAGACAGACAAAAGGACAGCCTGGCCTGGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR CCA 90 bp | GATGAAGTCCAGGCCAGGCTGTCCTTTTGTCTGTCTCAGGACGGATaGGTGGTACGGGCTCAGAACTGTCTCTACAGCCTGGTTGTTTAT | + |
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Preference number: 1 (lower is better) Translates to: DEVQARLSFCLSQDG*VVRAQNCLYSLVVY Trigger: ATAAACAACCAGGCTGTAGAGACAGTTCTGAGCCCGTACCACCCATCCGTCCTGAGACAGACAAAAGGACAGCCTGGCCTGGACTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR TCA 90 bp | TGGGAAGGTGGGAGGCAGAGATGGCACAGTTCCCAGAAGCTAGCCTaGCCTATGCTTCAAGGGTCAATGAGAGAGACTTCCTCAAACAAG | + |
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Preference number: 1 (lower is better) Translates to: WEGGRQRWHSSQKLA*PMLQGSMRETSSNK Trigger: CTTGTTTGAGGAAGTCTCTCTCATTGACCCTTGAAGCATAGGTCAGGCTAGCTTCTGGGAACTGTGCCATCTCTGCCTCCCACCTTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR CCA 90 bp | CCCAGAATCTGCTGCACCTTCCTAACAGAAAGCACAAAGCCCTACTaGCTGGGCAGAGGCAAGAACCACAAGACATCTCTCTCCTCATTC | + |
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Preference number: 1 (lower is better) Translates to: PRICCTFLTESTKPY*LGRGKNHKTSLSSF Trigger: GAATGAGGAGAGAGATGTCTTGTGGTTCTTGCCTCTGCCCAGCCAGTAGGGCTTTGTGCTTTCTGTTAGGAAGGTGCAGCAGATTCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR TCA 90 bp | TCACAGCCCTGGCAGGATTCAAATCAGGGCAGGTTTGGCAGATGGTaGAGTGAGATATCTCAGGTGCTGCACCAAGATGGTAAAGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: SQPWQDSNQGRFGRW*SEISQVLHQDGKVR Trigger: TCTCACTTTACCATCTTGGTGCAGCACCTGAGATATCTCACTTCACCATCTGCCAAACCTGCCCTGATTTGAATCCTGCCAGGGCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR CCA 90 bp | AGAACTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTaGCTCAGAGCTGGCTCCAGGATTTCTTGTCTGTCTGTCCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: RTVSTAWLFICPFSF*LRAGSRISCLSVPR Trigger: CCTTGGGACAGACAGACAAGAAATCCTGGAGCCAGCTCTGAGCCAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR TCA 90 bp | CCATGCCTAGAAGCCAGACTCAGGACTAGCCAAGGAGAGCTCAGATaGTTTCTATGTGCCAAGACTTCAAACCCAAATGGGTTATCTAGA | + |
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Preference number: 1 (lower is better) Translates to: PCLEARLRTSQGELR*FLCAKTSNPNGLSR Trigger: TCTAGATAACCCATTTGGGTTTGAAGTCTTGGCACATAGAAATCATCTGAGCTCTCCTTGGCTAGTCCTGAGTCTGGCTTCTAGGCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR GCA 90 bp | AACAAGGGGGAAGATGAGGACCAAGACAATATAAGAGTTGTCTTCTaGCTTGTGAACCATGGCACATGTGCATTCACACATGCACAGCTC | + |
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Preference number: 1 (lower is better) Translates to: NKGEDEDQDNIRVVF*LVNHGTCAFTHAQL Trigger: GAGCTGTGCATGTGTGAATGCACATGTGCCATGGTTCACAAGGCAGAAGACAACTCTTATATTGTCTTGGTCCTCATCTTCCCCCTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR GCA 90 bp | TCCCTCCATCCAGTAACCTGGATGCAGATATATTACTGGTATGCATaGTGTGGCCAATGTCCAGCAGAGAAAACCCCAGTATTAGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: SLHPVTWMQIYYWYA*CGQCPAEKTPVLVS Trigger: ACTAACTAATACTGGGGTTTTCTCTGCTGGACATTGGCCACAGCATGCATACCAGTAATATATCTGCATCCAGGTTACTGGATGGAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR GCA 90 bp | TACTTCCCTCCATCCAGTAACCTGGATGCAGATATATTACTGGTATaGATGCTGTGGCCAATGTCCAGCAGAGAAAACCCCAGTATTAGT | + |
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Preference number: 1 (lower is better) Translates to: YFPPSSNLDADILLV*MLWPMSSRENPSIS Trigger: ACTAATACTGGGGTTTTCTCTGCTGGACATTGGCCACAGCATGCATACCAGTAATATATCTGCATCCAGGTTACTGGATGGAGGGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR TCA 90 bp | TTCTTTTGTTTTGTGTGTGTGGTTCTGGGACCAAACCTCAGACCTTaGATTAAGCACTCTAGCACTGATCTACACTCACACCCTTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: FFCFVCVVLGPNLRP*IKHSSTDLHSHPSA Trigger: TGCAGAAGGGTGTGAGTGTAGATCAGTGCTAGAGTGCTTAATTCAAGGTCTGAGGTTTGGTCCCAGAACCACACACACAAAACAAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR GCA 90 bp | AGACAATATAAGAGTTGTCTTCTGCCTTGTGAACCATGGCACATGTaGATTCACACATGCACAGCTCACAAACACCAAATGCATGCATTG | + |
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Preference number: 1 (lower is better) Translates to: RQYKSCLLPCEPWHM*IHTCTAHKHQMHAL Trigger: CAATGCATGCATTTGGTGTTTGTGAGCTGTGCATGTGTGAATGCACATGTGCCATGGTTCACAAGGCAGAAGACAACTCTTATATTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR TCA 90 bp | AAAATAAGTATGGCAGAGATTGCTTCGTGGGTAAAGCACCTCCTGTaGAAGTCTGATGACCTGAGTCCAGAACTGCAGAAATCTTATAAA | + |
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Preference number: 1 (lower is better) Translates to: KISMAEIASWVKHLL*KSDDLSPELQKSYK Trigger: TTTATAAGATTTCTGCAGTTCTGGACTCAGGTCATCAGACTTTCACAGGAGGTGCTTTACCCACGAAGCAATCTCTGCCATACTTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCTCCTCTCCCCAGGGCTaGGCTCCTTGCTCCGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: TRGCWCPRAGNPATLEQPSSPQG*APCSEH Trigger: GTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGA...GGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTTCCTCTCCCCAGGGCTaGGCTCCTTGCTCCGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GCWCPRAGNPATLEQPLSSSPQG*APCSEH Trigger: GTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGA...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGCTGGTGTCCCAGGGCTaGAAATCCAGCCACCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: RAPEVWMAAQGYVLRLPWLVSQG*KSSHPR Trigger: TCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAG...CCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGAGGGCCCAGACTTCCTaGCAACTTCAGGAACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RAPEVWMAAQGYVLRLPWRAQTS*QLQEQG Trigger: GCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCT...CCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | CGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAAGGGCCCAGACTTCCTTCCTCTCCCCAGGGCTaGGCTCCTTGCTCCGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RPEAPLVAHFRKKGPRLPSSPQG*APCSEH Trigger: GTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGA...AGGAAGTCTGGGCCCTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | CCGGTAGTCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTGGGAGGCAGATCCTCTCCCCAGGGCTaGGCTCCTTGCTCCGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: PVVHACNPYAPSGKVGGRSSPQG*APCSEH Trigger: GTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGA...TCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGACTACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | CACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCAGCAGGGGATTGTGTaGGGGTACTGGCTACTCAAG | + |
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Preference number: 2 (lower is better) Translates to: HKGVLVSQGWKSSHPRAAQQGIV*GYWLLK Trigger: CTTGAGTAGCCAGTACCCTCACACAATCCCCTGCTG...GGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCAGCAGGGGATTGTGTaGGGGTACTGGCTACTCAAG | + |
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Preference number: 2 (lower is better) Translates to: TRGCWCPRAGNPATLEQPQQGIV*GYWLLK Trigger: CTTGAGTAGCCAGTACCCTCACACAATCCCCTGCTG...GGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | CCGGTAGTCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTGGGAGGCAGAGGCGGCAGAGGACCTTaGCAAAGCTCTGGCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: PVVHACNPYAPSGKVGGRGGRGP*QSSGQP Trigger: GGGCTGGCCAGAGCTTTGTCAAGGTCCTCTGCCGCC...TCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGACTACCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTCTGGTGTCCCAGGGCTaGAAATCCAGCCACCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SPSRPTSRAPEVWMAAQGLVSQG*KSSHPR Trigger: TCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAG...ACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTCCTGGAGATGGTGTTaGAGTGGAGAGGAAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SPSRPTSRAPEVWMAAQGSWRWC*SGEEGE Trigger: CTCCCCTTCCTCTCCACTTCAACACCATCTCCAGGA...ACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACAGAGCAGCCCCTTTCTaGAGATGTGGCAGCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PSRPTSRAPEVWMAAQGYRAAPF*RCGSKR Trigger: TCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCT...GTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACCTGAGGCTCCCCTGGTaGCACACTTTAGGAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PSRPTSRAPEVWMAAQGYLRLPW*HTLGRK Trigger: CTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAG...GTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | TCTATGGGGGCTGGGGACACAGCAAAGGATTCTAGTCATAGTGGAGCAGGGAGGGGTCCATGTCCTGCTTaGCCCAGCCTCTCCATCCCG | + |
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Preference number: 2 (lower is better) Translates to: SMGAGDTAKDSSHSGAGRGPCPA*PSLSIP Trigger: CGGGATGGAGAGGCTGGGCCAAGCAGGACATGGACC...CCTCCCTGCTCCACTATGACTAGAATCCTTTGCTGTGTCCCCAGCCCCCATAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCTCCTCTCCCCAGGGCTaGGCTCCTTGCTCCGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: TLFRLETFALPLGQSNEASSPQG*APCSEH Trigger: GTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGA...GGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTCCAAGGTCACAGCCCTGGCAGGATTCAAATCAGGGCAGGTTTGGCAGATGTACATCCAGGGCCCCTaGAGTCTGGATGGCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: CSKVTALAGFKSGQVWQMYIQGP*SLDGCP Trigger: TGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTA...CATCTGCCAAACCTGCCCTGATTTGAATCCTGCCAGGGCTGTGACCTTGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCACCCTAGAGCAGCCCCTTTCTGAAGATGTGGCAGCAAGAGAGCATTGGCAGCAGGGGATTGTGTaGGGGTACTGGCTACTCAAG | + |
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Preference number: 2 (lower is better) Translates to: PATLEQPLSEDVAAREHWQQGIV*GYWLLK Trigger: CTTGAGTAGCCAGTACCCTCACACAATCCCCTGCTG...CCAATGCTCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCTAGGGTGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTCCTGGTGGCTTTGTGGTCCTGCATATGGCTGGGCCCAGAACCCAGAAGGGTGTCTATGGGGGCTaGGGACACAGCAAAGGATTC | + |
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Preference number: 2 (lower is better) Translates to: VFPGGFVVLHMAGPRTQKGVYGG*GHSKGF Trigger: GAATCCTTTGCTGTGTCCCCAGCCCCCATAGACACC...CTTCTGGGTTCTGGGCCCAGCCATATGCAGGACCACAAAGCCACCAGGAAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR GCA 90 bp | CACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCACCTTGGTCTTTGGTaGTTTCTTGAGATTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: HKGVLVSQGWKSSHPRAAHLGLW*FLEILL Trigger: CAAGAGAATCTCAAGAAAGCACCAAAGACCAAGGTG...GGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGAAAAGCAACTTGCTCCAAGGTCACAGCCCTGGCAGGATTCAAATCAGGATGGCCACAAGGGGGTaGTGGTGTCCCAGGGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TEKSNLLQGHSPGRIQIRMATRG*WCPRAG Trigger: TCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCAT...CCTGATTTGAATCCTGCCAGGGCTGTGACCTTGGAGCAAGTTGCTTTTCTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGGCCACAAGGGGGTaGTGGTGTCCCAGGGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ISPPCSDWRHLPYHWGSLMATRG*WCPRAG Trigger: TCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCAT...TAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTGGCTACAGAGCTCAGTaGGCAAGAGGGTCATCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: RKGPDFLATSGTGPPGDGGYRAQ*ARGSSD Trigger: ATCAGATGACCCTCTTGCCCACTGAGCTCTGTAGCC...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAAAAACAGAGTGAGAAATaGCCACAAGGGGGTGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GCPGLRPEAPLVAHFRKKKQSEK*PQGGAG Trigger: ACCAGCACCCCCTTGTGGCCATTTCTCACTCTGTTT...TTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCTACTAGCAGGGTGTGGCTGTGTTGATGGCCCCACCTGGCATCAGATCATGGGTCCTGCATATGGCTaGGCCCAGAACCCAGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LLLAGCGCVDGPTWHQIMGPAYG*AQNPEV Trigger: AACTTCTGGGTTCTGGGCCCAGCCATATGCAGGACC...CATGATCTGATGCCAGGTGGGGCCATCAACACAGCCACACCCTGCTAGTAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTCTTTGGTGCTTTCTTaGGATTCTCTTGTTGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SPSRPTSRAPEVWMAAQGSLVLS*DSLVGY Trigger: GTAGCCAACAAGAGAATCTCAAGAAAGCACCAAAGA...ACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACAAAGCCCTACTGGCTGGGCAGAGGCAAGAACCACAAGACATCTCTCTCCAGAGCAGCCCCTTTCTaGAGATGTGGCAGCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: STKPYWLGRGKNHKTSLSRAAPF*RCGSKR Trigger: TCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCT...GGAGAGAGATGTCTTGTGGTTCTTGCCTCTGCCCAGCCAGTAGGGCTTTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGACCCTTTCTGAAGATGTaGCAGCAAGAGAGCATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: MAAQGYVLRLPWWHTLGRPFLKM*QQESIG Trigger: ACCAATGCTCTCTTGCTGCCACATCTTCAGAAAGGG...TCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAACCACCTTGTTCAGATTaGAGACATTTGCCCTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: GCPGLRPEAPLVAHFRKKPPCSD*RHLPYH Trigger: GTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGG...TTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | TCGCGTTACATTCCATTGGAAGGAAATAGGGGCGTGGTGAAGGATATGTCCAGGCCCCTGAAGTCTGGATaGCTGCCCAGGGTTACGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SRYIPLEGNRGVVKDMSRPLKSG*LPRVTS Trigger: GGACGTAACCCTGGGCAGCCATCCAGACTTCAGGGG...CCTGGACATATCCTTCACCACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGCAGTTATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGCAGCAGGGGATTGTGTaGGGGTACTGGCTACTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: GQLSLHLVQIGDICPTTGQQGIV*GYWLLK Trigger: CTTGAGTAGCCAGTACCCTCACACAATCCCCTGCTG...CCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATGGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTACACCTTGGTCTTTGGTaGTTTCTTGAGATTCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: EMATRGCWCPRAGNPATLHLGLW*FLEILL Trigger: CAAGAGAATCTCAAGAAAGCACCAAAGACCAAGGTG...TAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGAAAAGCAACTTGCTCCAAGGTCACAGCCCTGGCAGGATTCAAATCAGGCTGGTGTCCCAGGGCTaGAAATCCAGCCACCCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: TEKSNLLQGHSPGRIQIRLVSQG*KSSHPR Trigger: TCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAG...CCTGATTTGAATCCTGCCAGGGCTGTGACCTTGGAGCAAGTTGCTTTTCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | TCGCGTTACATTCCATTGGAAGGAAATAGGGGCGTGGTGAAGGATATGTCCAGGCTGGTGTCCCAGGGCTaGAAATCCAGCCACCCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SRYIPLEGNRGVVKDMSRLVSQG*KSSHPR Trigger: TCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAG...CCTGGACATATCCTTCACCACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTGTTGAAGTGGAGAAACAGAGTGAGAAATaGCCACAAGGGGGTGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: DFLATSGTGPPGDGVEVEKQSEK*PQGGAG Trigger: ACCAGCACCCCCTTGTGGCCATTTCTCACTCTGTTT...CTCCACTTCAACACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGTAGTCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTGGGAGGCAGACCACCTTGTTCAGATTaGAGACATTTGCCCTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: PVVHACNPYAPSGKVGGRPPCSD*RHLPYH Trigger: GTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGG...TCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGACTACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTACAGCAGGGGATTGTGTaGGGGTACTGGCTACTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: ISPPCSDWRHLPYHWGSLQQGIV*GYWLLK Trigger: CTTGAGTAGCCAGTACCCTCACACAATCCCCTGCTG...TAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGTTATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGAGAGCAGCCCCTTTCTaGAGATGTGGCAGCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GQLSLHLVQIGDICPTTGRAAPF*RCGSKR Trigger: TCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCT...CCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGAAAAGCAACTTGCTCCAAGGTCACAGCCCTGGCAGGATTCAAATCAGGACCTCCACTTGTGCCTaGCATGCCTGGCACTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TEKSNLLQGHSPGRIQIRTSTCA*HAWHFC Trigger: ACAGAAGTGCCAGGCATGGCAGGCACAAGTGGAGGT...CCTGATTTGAATCCTGCCAGGGCTGTGACCTTGGAGCAAGTTGCTTTTCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCAAGGTCACAGCCCTGGCAGGATTCAAATCAGGGCAGGTTTGGCAGATGCCCTTTCTGAAGATGTaGCAGCAAGAGAGCATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: CSKVTALAGFKSGQVWQMPFLKM*QQESIG Trigger: ACCAATGCTCTCTTGCTGCCACATCTTCAGAAAGGG...CATCTGCCAAACCTGCCCTGATTTGAATCCTGCCAGGGCTGTGACCTTGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGAAAAGCAACTTGCTCCAAGGTCACAGCCCTGGCAGGATTCAAATCAGGGGTCCTGCATATGGCTaGGCCCAGAACCCAGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TEKSNLLQGHSPGRIQIRGPAYG*AQNPEV Trigger: AACTTCTGGGTTCTGGGCCCAGCCATATGCAGGACC...CCTGATTTGAATCCTGCCAGGGCTGTGACCTTGGAGCAAGTTGCTTTTCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR CAA 90 bp | CTTGGACTCACCTTCAGAGCACTTCGGGGCAGTTATCTCTCCACCTaGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: LGLTFRALRGSYLST*FRLETFALPLGQSN Trigger: ATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCCCGAAGTGCTCTGAAGGTGAGTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTTCTTTGGTGCTTTCTTaGGATTCTCTTGTTGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: RKGPDFLATSGTGPPGDGSLVLS*DSLVGY Trigger: GTAGCCAACAAGAGAATCTCAAGAAAGCACCAAAGA...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTAGAGCAGCCCCTTTCTaGAGATGTGGCAGCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: CSDWRHLPYHWGSLMRPLRAAPF*RCGSKR Trigger: TCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCT...AAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR TCA 90 bp | TCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGAGAGCAGCCCCTTTCTaGAGATGTGGCAGCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: STLFRLETFALPLGQSNERAAPF*RCGSKR Trigger: TCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCT...CTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGGCTACAGAGCTCAGTaGGCAAGAGGGTCATCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: STLFRLETFALPLGQSNEGYRAQ*ARGSSD Trigger: ATCAGATGACCCTCTTGCCCACTGAGCTCTGTAGCC...CTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAAGCTGGTGTCCCAGGGCTaGAAATCCAGCCACCCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: AASIYSKSLEESDSRRQKLVSQG*KSSHPR Trigger: TCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAG...CTTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGTAGTCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTGGGAGGCAGATTTGTTTTGTGTGTGTaGTTCTGGGACCAAACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PVVHACNPYAPSGKVGGRFVLCV*FWDQTS Trigger: TGAGGTTTGGTCCCAGAACCACACACACAAAACAAA...TCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGACTACCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR CAA 90 bp | ATGTCCACAGTCTTCAGAGCACTTCGGGGCAGTTATCTCTCCACCTaGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: MSTVFRALRGSYLST*FRLETFALPLGQSN Trigger: ATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCCCGAAGTGCTCTGAAGACTGTGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144788.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCGCCTAGCCCCTACCAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTAGAGCAGCCCCTTTCTaGAGATGTGGCAGCAAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LPPSPYQQSLPLLNRDRVRAAPF*RCGSKR Trigger: TCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCT...AACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTGGTAGGGGCTAGGCGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTAAACAGAGTGAGAAATaGCCACAAGGGGGTGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: CSDWRHLPYHWGSLMRPLKQSEK*PQGGAG Trigger: ACCAGCACCCCCTTGTGGCCATTTCTCACTCTGTTT...AAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGAAACAGAGTGAGAAATaGCCACAAGGGGGTGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: STLFRLETFALPLGQSNEKQSEK*PQGGAG Trigger: ACCAGCACCCCCTTGTGGCCATTTCTCACTCTGTTT...CTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTATGGGGGCTGGGGACACAGCAAAGGATTCTAGTCATAGTGGAGCAGGGAGGTCTAATGAGGCCACTTaGAAACAGAGTGAGAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: SMGAGDTAKDSSHSGAGRSNEAT*KQSEKW Trigger: CCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGA...CCTCCCTGCTCCACTATGACTAGAATCCTTTGCTGTGTCCCCAGCCCCCATAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | ATATCTCAGGTGCTGCACCAAGATGGTAAAGTGAGACATCTCAGGGTCCTGCACCTCCATGCAGAAGAATaGAGGAGGGATCTTGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: ISQVLHQDGKVRHLRVLHLHAEE*RRDLGL Trigger: GAGTCCAAGATCCCTCCTCCATTCTTCTGCATGGAG...GTGCAGGACCCTGAGATGTCTCACTTTACCATCTTGGTGCAGCACCTGAGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCCAAGGTCACAGCCCTGGCAGGATTCAAATCAGGGCAGGTTTGGCAGATGTTTGTTTTGTGTGTGTaGTTCTGGGACCAAACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: CSKVTALAGFKSGQVWQMFVLCV*FWDQTS Trigger: TGAGGTTTGGTCCCAGAACCACACACACAAAACAAA...CATCTGCCAAACCTGCCCTGATTTGAATCCTGCCAGGGCTGTGACCTTGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCTAATGAGGCCACTTGGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGTCTTTGGTGCTTTCTTaGGATTCTCTTGTTGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SLMRPLGNRVRNGHKGVLSLVLS*DSLVGY Trigger: GTAGCCAACAAGAGAATCTCAAGAAAGCACCAAAGA...CAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGTAACCCGCAGCAGGGGATTGTGTaGGGGTACTGGCTACTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: MQGLQEIFAYTLTGTSNPQQGIV*GYWLLK Trigger: CTTGAGTAGCCAGTACCCTCACACAATCCCCTGCTG...CGGGTTACTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAGTTATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGCACCTTGGTCTTTGGTaGTTTCTTGAGATTCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GQLSLHLVQIGDICPTTGHLGLW*FLEILL Trigger: CAAGAGAATCTCAAGAAAGCACCAAAGACCAAGGTG...CCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | CAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTACATTCCATTGGAAGGAAGGTCCATGTCCTGCTTaGCCCAGCCTCTCCATCCCG | + |
|
Preference number: 2 (lower is better) Translates to: QQSLPLLNRDRVTFHWKEGPCPA*PSLSIP Trigger: CGGGATGGAGAGGCTGGGCCAAGCAGGACATGGACC...TTCCTTCCAATGGAATGTAACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTTCTTTGGTGCTTTCTTaGGATTCTCTTGTTGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: CSDWRHLPYHWGSLMRPLSLVLS*DSLVGY Trigger: GTAGCCAACAAGAGAATCTCAAGAAAGCACCAAAGA...AAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | GGACTCTATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGGGCTACAGAGCTCAGTaGGCAAGAGGGTCATCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: GLYAGSPRDICIYINRYQGYRAQ*ARGSSD Trigger: ATCAGATGACCCTCTTGCCCACTGAGCTCTGTAGCC...CTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCATAGAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCGCCTAGCCCCTACCAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTGAGCACCTTGGTCTTTaGTGCTTTCTTGAGATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LPPSPYQQSLPLLNRDRVEHLGL*CFLEIL Trigger: GAGAATCTCAAGAAAGCACCAAAGACCAAGGTGCTC...AACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTGGTAGGGGCTAGGCGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000238672.2 |
||
| 3UTR CAA 90 bp | CAAGCCTCTACCACTGAGGTAAATAAACCCAACCTCAGGACCTCTTaGTGTTCTCCAGTGCCTCTATCCATTTACATGAGGGATAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: QASTTEVNKPNLRTS*CSPVPLSIYMRDNS Trigger: GCTATTATCCCTCATGTAAATGGATAGAGGCACTGGAGAACACAAAGAGGTCCTGAGGTTGGGTTTATTTACCTCAGTGGTAGAGGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTGCAAGATGCAAAATGTTTGTAGCTTGGTTTCATGGCAGTATGAATGTGCCTGCTACTGACAACCTCTaGCCCAGCCCAGAATCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: FARCKMFVAWFHGSMNVPATDNL*PSPESA Trigger: AGCAGATTCTGGGCTGGGGCAGAGGTTGTCAGTAGC...AGGCACATTCATACTGCCATGAAACCAAGCTACAAACATTTTGCATCTTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAAGGTGGACCACCTTGTTCAGATTaGAGACATTTGCCCTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: FHLQQISRGIRFTEAEGGPPCSD*RHLPYH Trigger: GTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGG...TCCACCTTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | GGACTCTATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGCCACCTTGTTCAGATTaGAGACATTTGCCCTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: GLYAGSPRDICIYINRYQPPCSD*RHLPYH Trigger: GTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGG...CTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCATAGAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR CAA 90 bp | AGGAACCTAGGTTACAATTCGATCCCAGTCTCTGTTTCTTTTGTTTaGTGTGTGTGGTTCTGGGACCAAACCTCAGACCTTGAATTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RNLGYNSIPVSVSFV*CVWFWDQTSDLELS Trigger: GCTTAATTCAAGGTCTGAGGTTTGGTCCCAGAACCACACACACAAAACAAAAGAAACAGAGACTGGGATCGAATTGTAACCTAGGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR CCA 90 bp | CAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTACATTCCATTGGAAGGAACTGAGGCTCCCCTGGTaGCACACTTTAGGAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QQSLPLLNRDRVTFHWKELRLPW*HTLGRK Trigger: CTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAG...TTCCTTCCAATGGAATGTAACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | CAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTACATTCCATTGGAAGGAACTCCATGCAGAAGAATaGAGGAGGGATCTTGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: QQSLPLLNRDRVTFHWKELHAEE*RRDLGL Trigger: GAGTCCAAGATCCCTCCTCCATTCTTCTGCATGGAG...TTCCTTCCAATGGAATGTAACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR TCA 90 bp | GGACTCTATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGCATGCATTGTATGAATaGGTGAATGAGGGAAGATTG | + |
|
Preference number: 2 (lower is better) Translates to: GLYAGSPRDICIYINRYQHALYE*VNEGRL Trigger: CAATCTTCCCTCATTCACTCATTCATACAATGCATG...CTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCATAGAGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | CAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTACATTCCATTGGAAGGAACCCTTTCTGAAGATGTaGCAGCAAGAGAGCATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: QQSLPLLNRDRVTFHWKEPFLKM*QQESIG Trigger: ACCAATGCTCTCTTGCTGCCACATCTTCAGAAAGGG...TTCCTTCCAATGGAATGTAACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | AAATTTACTAACGGTAATTTATTCAAAGGACTCTATGCAGGGTCTCCAAGAGATCTCCATGCAGAAGAATaGAGGAGGGATCTTGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: KFTNGNLFKGLYAGSPRDLHAEE*RRDLGL Trigger: GAGTCCAAGATCCCTCCTCCATTCTTCTGCATGGAG...ATCTCTTGGAGACCCTGCATAGAGTCCTTTGAATAAATTACCGTTAGTAAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CCA 90 bp | CAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTACATTCCATTGGAAGGAAGAGCACCTTGGTCTTTaGTGCTTTCTTGAGATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QQSLPLLNRDRVTFHWKEEHLGL*CFLEIL Trigger: GAGAATCTCAAGAAAGCACCAAAGACCAAGGTGCTC...TTCCTTCCAATGGAATGTAACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR GCA 90 bp | CAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTACATTCCATTGGAAGGAACACCTTGGTCTTTGGTaGTTTCTTGAGATTCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QQSLPLLNRDRVTFHWKEHLGLW*FLEILL Trigger: CAAGAGAATCTCAAGAAAGCACCAAAGACCAAGGTG...TTCCTTCCAATGGAATGTAACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGATAAACACAGTGGGCTGTTACACATACATCAGAATATTACCAAGTCTTAAATCTTTGGTGCTTTCTTaGGATTCTCTTGTTGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: WINTVGCYTYIRILPSLKSLVLS*DSLVGY Trigger: GTAGCCAACAAGAGAATCTCAAGAAAGCACCAAAGA...TTTAAGACTTGGTAATATTCTGATGTATGTGTAACAGCCCACTGTGTTTATCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGATAAACACAGTGGGCTGTTACACATACATCAGAATATTACCAAGTCTTAAACACCTTGGTCTTTGGTaGTTTCTTGAGATTCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: WINTVGCYTYIRILPSLKHLGLW*FLEILL Trigger: CAAGAGAATCTCAAGAAAGCACCAAAGACCAAGGTG...TTTAAGACTTGGTAATATTCTGATGTATGTGTAACAGCCCACTGTGTTTATCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTCCAGGGCTGAGCTCCTaGCTCCGAGCACCTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GCWCPRAGNPATLEQPLSPGLSS*LRAPWS Trigger: AGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGG...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTTCCTGGTGGCTTTGTGGTCCTGCATATGGCTGGGCCCAGAACCCAGAAGGCCCCGCACCTCCACTaGTGCCTGCCATGCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VFPGGFVVLHMAGPRTQKAPHLH*CLPCLA Trigger: TGCCAGGCATGGCAGGCACAAGTGGAGGTGCGGGGC...CTTCTGGGTTCTGGGCCCAGCCATATGCAGGACCACAAAGCCACCAGGAAACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCACCTTGGTCTTTGGTGCTGGCCAGGCTGTCCTTTaGTCTGTCTCAGGACGGATG | + |
|
Preference number: 3 (lower is better) Translates to: GPLPRAELLAPSTLVFGAGQAVL*SVSGRM Trigger: CATCCGTCCTGAGACAGACAAAAGGACAGCCTGGCC...AGCACCAAAGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR TCA 72 bp | CCATGCCTGGCACTTCTGTCGTCCCCATCTGTCCTATaGCAGGTGGCATCGATCAGCCCCAGGAAGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PCLALLSSPSVL*QVASISPRKPG Trigger: CCCAGGCTTCCTGGGGCTGATCGATGCCACCTGTCATAGGACAGATGGGGACGACAGAAGTGCCAGGCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR GCA 72 bp | CTGGCCAGAGCCCCAGGGCACAGGAGTGAAGGCCACTaGCGCCTAGCCCCTACCAACAAAGCCTTCCTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LARAPGHRSEGH*RLAPTNKAFLY Trigger: ATAAAGGAAGGCTTTGTTGGTAGGGGCTAGGCGGCAGTGGCCTTCACTCCTGTGCCCTGGGGCTCTGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000238672.2 |
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| 3UTR CCA 72 bp | ATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTaGCACACTTTAGGAAGAAAGGGCCCAGACTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: MAAQGYVLRLPW*HTLGRKGPDFL Trigger: CAGGAAGTCTGGGCCCTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR CCA 72 bp | TGGATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTaGTGGCACACTTTAGGAAGAAAGGGCCCAGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: WMAAQGYVLRLP*WHTLGRKGPDF Trigger: GAAGTCTGGGCCCTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR CCA 72 bp | CCTCTGTGGGCCTCTGGGTGTTTCCTGGTGGCTTTGTaGTCCTGCATATGGCTGGGCCCAGAACCCAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PLWASGCFLVAL*SCIWLGPEPRS Trigger: ACTTCTGGGTTCTGGGCCCAGCCATATGCAGGACCACAAAGCCACCAGGAAACACCCAGAGGCCCACAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR CAA 90 bp | CGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAAGGGCCCAGACTTCCTGGCCAGGCTGTCCTTTaGTCTGTCTCAGGACGGATG | + |
|
Preference number: 3 (lower is better) Translates to: RPEAPLVAHFRKKGPRLPGQAVL*SVSGRM Trigger: CATCCGTCCTGAGACAGACAAAAGGACAGCCTGGCC...AGGAAGTCTGGGCCCTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCTTGAGATTCTCTTGTaGGCTACAGAGCTCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HKGVLVSQGWKSSHPRAALEILL*ATELSG Trigger: CCCACTGAGCTCTGTAGCCAACAAGAGAATCTCAAG...GGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR-3UTR CAA 90 bp | AATGGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGTAAGCAGCAGGGGATaGTGTGAGGGTACTGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: NGHKGVLVSQGWKSSHPRVSSRG*CEGTGY Trigger: GTAGCCAGTACCCTCACACAATCCCCTGCTGCTTAC...TCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACCTTGAGATTCTCTTGTaGGCTACAGAGCTCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PSRPTSRAPEVWMAAQGYLEILL*ATELSG Trigger: CCCACTGAGCTCTGTAGCCAACAAGAGAATCTCAAG...GTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAAGGGCCCAGACTTCCTGTAAGCAGCAGGGGATaGTGTGAGGGTACTGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RPEAPLVAHFRKKGPRLPVSSRG*CEGTGY Trigger: GTAGCCAGTACCCTCACACAATCCCCTGCTGCTTAC...AGGAAGTCTGGGCCCTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | CAGGCCAGGCTGTCCTTTTGTCTGTCTCAGGACGGATaGGTGGTACGGGCTCAGAACTGTCTCTACAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QARLSFCLSQDG*VVRAQNCLYSL Trigger: CAGGCTGTAGAGACAGTTCTGAGCCCGTACCACCCATCCGTCCTGAGACAGACAAAAGGACAGCCTGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR CCA 72 bp | AGTAAGGTCCTCTGTGGGCCTCTGGGTGTTTCCTGGTaGCTTTGTGGTCCTGCATATGGCTGGGCCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SKVLCGPLGVSW*LCGPAYGWAQN Trigger: GTTCTGGGCCCAGCCATATGCAGGACCACAAAGCCACCAGGAAACACCCAGAGGCCCACAGAGGACCTTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR-3UTR CAA 90 bp | GAAATGGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTACTTGAGATTCTCTTGTaGGCTACAGAGCTCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EMATRGCWCPRAGNPATLLEILL*ATELSG Trigger: CCCACTGAGCTCTGTAGCCAACAAGAGAATCTCAAG...TAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAATCTGCTGCACCTTCCTAACAGAAAGCACAAAGCCCTACTGGCTGGGCAGACCAGGGCTGAGCTCCTaGCTCCGAGCACCTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RICCTFLTESTKPYWLGRPGLSS*LRAPWS Trigger: AGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGG...TCTGCCCAGCCAGTAGGGCTTTGTGCTTTCTGTTAGGAAGGTGCAGCAGATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAATACCTCCATGCCTAGAAGCCAGACTCAGGACTAGCCAAGGAGAGCTCAGAGGGTCCATGTCCTGCTaGGCCCAGCCTCTCCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: LIPPCLEARLRTSQGELRGSMSC*AQPLHP Trigger: GGGATGGAGAGGCTGGGCCAAGCAGGACATGGACCC...TCTGAGCTCTCCTTGGCTAGTCCTGAGTCTGGCTTCTAGGCATGGAGGTATTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | CCAGGCTGTCCTTTTGTCTGTCTCAGGACGGATGGGTaGTACGGGCTCAGAACTGTCTCTACAGCCTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PGCPFVCLRTDG*YGLRTVSTAWL Trigger: CAACCAGGCTGTAGAGACAGTTCTGAGCCCGTACCACCCATCCGTCCTGAGACAGACAAAAGGACAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | GGACAAGTCAGGGGAGTAAGGTCCTCTGTGGGCCTCTaGGTGTTTCCTGGTGGCTTTGTGGTCCTGCATATG | + |
|
Preference number: 3 (lower is better) Translates to: GQVRGVRSSVGL*VFPGGFVVLHM Trigger: CATATGCAGGACCACAAAGCCACCAGGAAACACCCAGAGGCCCACAGAGGACCTTACTCCCCTGACTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTATGGGGGCTGGGGACACAGCAAAGGATTCTAGTCATAGTGGAGCAGGGAGGGTAAGCAGCAGGGGATaGTGTGAGGGTACTGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SMGAGDTAKDSSHSGAGRVSSRG*CEGTGY Trigger: GTAGCCAGTACCCTCACACAATCCCCTGCTGCTTAC...CCTCCCTGCTCCACTATGACTAGAATCCTTTGCTGTGTCCCCAGCCCCCATAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTAATGGAGGAGGGATCTaGGACTCACCTTCAGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RKGPDFLATSGTGPPGDGNGGGI*DSPSEH Trigger: GTGCTCTGAAGGTGAGTCCAAGATCCCTCCTCCATT...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | AGAGGAAGGGGAGAGGGAGGCCTCCATGCAGAAGAATaGAGGAGGGATCTTGGACTCACCTTCAGAGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: RGRGEGGLHAEE*RRDLGLTFRAL Trigger: AAGTGCTCTGAAGGTGAGTCCAAGATCCCTCCTCCATTCTTCTGCATGGAGGCCTCCCTCTCCCCTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | GTACACCTGGGCCTCAGGCCAATAGAGAAATCTCTGTaGGCTACTGACAACCTCTGCCCCAGCCCAGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: VHLGLRPIEKSL*ATDNLCPSPES Trigger: AGATTCTGGGCTGGGGCAGAGGTTGTCAGTAGCCCACAGAGATTTCTCTATTGGCCTGAGGCCCAGGTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | GGAGACGACAGGGTCTGGTCAGTGACCAGGTGTCTATaGGGGCTGGGGACACAGCAAAGGATTCTAGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: GDDRVWSVTRCL*GLGTQQRILVI Trigger: TATGACTAGAATCCTTTGCTGTGTCCCCAGCCCCCATAGACACCTGGTCACTGACCAGACCCTGTCGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | GTGGCTGTGTTGATGGCCCCACCTGGCATCAGATCATaGACAATGCTCTGTAGAAGCAGGACAAGTCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VAVLMAPPGIRS*TMLCRSRTSQG Trigger: CCCCTGACTTGTCCTGCTTCTACAGAGCATTGTCCATGATCTGATGCCAGGTGGGGCCATCAACACAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | TCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTaGGAGGCAGAGATGGCACAGTTCCCAGAAGCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SMPVIPMLLVGR*EAEMAQFPEAS Trigger: GCTAGCTTCTGGGAACTGTGCCATCTCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGATCCACCTTGTTCAGATaGGAGACATTTGCCCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: MAAQGYVLRLPWWHTLGRSTLFR*ETFALP Trigger: TGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA...TCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAATCCACCTTGTTCAGATaGGAGACATTTGCCCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: GCPGLRPEAPLVAHFRKKSTLFR*ETFALP Trigger: TGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA...TTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAAGGGCCCAGACTTCCTTCCACCTTGTTCAGATaGGAGACATTTGCCCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: RPEAPLVAHFRKKGPRLPSTLFR*ETFALP Trigger: TGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA...AGGAAGTCTGGGCCCTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR TCA 72 bp | GGGAGGCAGAGATGGCACAGTTCCCAGAAGCTAGCCTaGCCTATGCTTCAAGGGTCAATGAGAGAGACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GRQRWHSSQKLA*PMLQGSMRETS Trigger: GGAAGTCTCTCTCATTGACCCTTGAAGCATAGGTCAGGCTAGCTTCTGGGAACTGTGCCATCTCTGCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR GCA 72 bp | CAGGATTTCTTGTCTGTCTGTCCCAAGGCAGCTGTTTaGTCTAGCTCAGAGCTTACTTCAGGCCTGGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QDFLSVCPKAAV*SSSELTSGLGP Trigger: TGGCCCCAGGCCTGAAGTAAGCTCTGAGCTAGAGCAAACAGCTGCCTTGGGACAGACAGACAAGAAATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | TTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTaGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FALPLGQSNEAT*KQSEKWPQGGA Trigger: AGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGGCCAGGCTGTCCTTTaGTCTGTCTCAGGACGGATG | + |
|
Preference number: 3 (lower is better) Translates to: STLFRLETFALPLGQSNEGQAVL*SVSGRM Trigger: CATCCGTCCTGAGACAGACAAAAGGACAGCCTGGCC...CTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTGGCCAGGCTGTCCTTTaGTCTGTCTCAGGACGGATG | + |
|
Preference number: 3 (lower is better) Translates to: CSDWRHLPYHWGSLMRPLGQAVL*SVSGRM Trigger: CATCCGTCCTGAGACAGACAAAAGGACAGCCTGGCC...AAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGGTAGTCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTGGGAGGCAGATCCACCTTGTTCAGATaGGAGACATTTGCCCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: PVVHACNPYAPSGKVGGRSTLFR*ETFALP Trigger: TGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA...TCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGACTACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR TCA 72 bp | GAGGAATCAGATTCACGGAGGCAGAAGGTGGAATGCTaGTGTCCACAGTCTTCAGAGCACTTCGGGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: EESDSRRQKVEC*CPQSSEHFGAV Trigger: AACTGCCCCGAAGTGCTCTGAAGACTGTGGACATCAGCATTCCACCTTCTGCCTCCGTGAATCTGATTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144788.8 |
||
| 3UTR CCA 72 bp | TGCTGCACCTTCCTAACAGAAAGCACAAAGCCCTACTaGCTGGGCAGAGGCAAGAACCACAAGACATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CCTFLTESTKPY*LGRGKNHKTSL Trigger: GAGAGATGTCTTGTGGTTCTTGCCTCTGCCCAGCCAGTAGGGCTTTGTGCTTTCTGTTAGGAAGGTGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCGCCTAGCCCCTACCAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTGGCCAGGCTGTCCTTTaGTCTGTCTCAGGACGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LPPSPYQQSLPLLNRDRVGQAVL*SVSGRM Trigger: CATCCGTCCTGAGACAGACAAAAGGACAGCCTGGCC...AACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTGGTAGGGGCTAGGCGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGATTTCTTGAGATTCTCTaGTTGGCTACAGAGCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: MAAQGYVLRLPWWHTLGRFLEIL*LATELS Trigger: ACTGAGCTCTGTAGCCAACAAGAGAATCTCAAGAAA...TCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAAGGGCCCAGACTTCCTGTCTTTGGTGCTTTCTaGAGATTCTCTTGTTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RPEAPLVAHFRKKGPRLPVFGAF*RFSCWL Trigger: TAGCCAACAAGAGAATCTCAAGAAAGCACCAAAGAC...AGGAAGTCTGGGCCCTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTGTCTTTGGTGCTTTCTaGAGATTCTCTTGTTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RKGPDFLATSGTGPPGDGVFGAF*RFSCWL Trigger: TAGCCAACAAGAGAATCTCAAGAAAGCACCAAAGAC...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCACCCTAGAGCAGCCCCTTTCTGAAGATGTGGCAGCAAGAGAGCATTGGGTCTTTGGTGCTTTCTaGAGATTCTCTTGTTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PATLEQPLSEDVAAREHWVFGAF*RFSCWL Trigger: TAGCCAACAAGAGAATCTCAAGAAAGCACCAAAGAC...CCAATGCTCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCTAGGGTGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTCTATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGCCAGGGCTGAGCTCCTaGCTCCGAGCACCTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLYAGSPRDICIYINRYQPGLSS*LRAPWS Trigger: AGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGG...CTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCATAGAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAATCTGCTGCACCTTCCTAACAGAAAGCACAAAGCCCTACTGGCTGGGCAGATCGCGTTACATTCCATaGGAAGGAAATAGGGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: RICCTFLTESTKPYWLGRSRYIP*EGNRGV Trigger: CACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA...TCTGCCCAGCCAGTAGGGCTTTGTGCTTTCTGTTAGGAAGGTGCAGCAGATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR TCA 72 bp | GAGGAATCAGATTCACGGAGGCAGAAGGTGGAATGCTaGTGTCCACAGTCTAGGGGCAGGAGAAATAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: EESDSRRQKVEC*CPQSRGRRNRE Trigger: TTCCCTATTTCTCCTGCCCCTAGACTGTGGACATCAGCATTCCACCTTCTGCCTCCGTGAATCTGATTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | CCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTaGGGCAGTCTAATGAGGCCACTTGGAAACAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PPCSDWRHLPYH*GSLMRPLGNRV Trigger: CACTCTGTTTCCAAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | TATAAGAACAGAGGGGTAATGGAGGCAGCAGAGTCCTaGGAACAAGCTACTTGCCGGAGAACATGTGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YKNRGVMEAAES*EQATCRRTCEG Trigger: GCCTTCACATGTTCTCCGGCAAGTAGCTTGTTCCCAGGACTCTGCTGCCTCCATTACCCCTCTGTTCTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTCTTGAGATTCTCTTGTaGGCTACAGAGCTCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CSDWRHLPYHWGSLMRPLLEILL*ATELSG Trigger: CCCACTGAGCTCTGTAGCCAACAAGAGAATCTCAAG...AAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR TCA 72 bp | TGGCAGGATTCAAATCAGGGCAGGTTTGGCAGATGGTaGAGTGAGATATCTCAGGTGCTGCACCAAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: WQDSNQGRFGRW*SEISQVLHQDG Trigger: ACCATCTTGGTGCAGCACCTGAGATATCTCACTTCACCATCTGCCAAACCTGCCCTGATTTGAATCCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR TCA 72 bp | GAAGCCAGACTCAGGACTAGCCAAGGAGAGCTCAGATaGTTTCTATGTGCCAAGACTTCAAACCCAAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: EARLRTSQGELR*FLCAKTSNPNG Trigger: CCCATTTGGGTTTGAAGTCTTGGCACATAGAAATCATCTGAGCTCTCCTTGGCTAGTCCTGAGTCTGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR GCA 72 bp | CCATCCAGTAACCTGGATGCAGATATATTACTGGTATaGATGCTGTGGCCAATGTCCAGCAGAGAAAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: PSSNLDADILLV*MLWPMSSRENP Trigger: GGGGTTTTCTCTGCTGGACATTGGCCACAGCATGCATACCAGTAATATATCTGCATCCAGGTTACTGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTCTATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGGTAAGCAGCAGGGGATaGTGTGAGGGTACTGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GLYAGSPRDICIYINRYQVSSRG*CEGTGY Trigger: GTAGCCAGTACCCTCACACAATCCCCTGCTGCTTAC...CTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCATAGAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAACTTGAGATTCTCTTGTaGGCTACAGAGCTCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CCFHLQQISRGIRFTEAELEILL*ATELSG Trigger: CCCACTGAGCTCTGTAGCCAACAAGAGAATCTCAAG...TTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAAGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGCGTTACATTCCATTGGAAGGAAATAGGGGCGTGGTGAAGGATATGTCCAGGGTCTTTGGTGCTTTCTaGAGATTCTCTTGTTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SRYIPLEGNRGVVKDMSRVFGAF*RFSCWL Trigger: TAGCCAACAAGAGAATCTCAAGAAAGCACCAAAGAC...CCTGGACATATCCTTCACCACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATTTACTAACGGTAATTTATTCAAAGGACTCTATGCAGGGTCTCCAAGAGATCCAGGGCTGAGCTCCTaGCTCCGAGCACCTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KFTNGNLFKGLYAGSPRDPGLSS*LRAPWS Trigger: AGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGG...ATCTCTTGGAGACCCTGCATAGAGTCCTTTGAATAAATTACCGTTAGTAAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | TCCCTCCATCCAGTAACCTGGATGCAGATATATTACTaGTATGCATGCTGTGGCCAATGTCCAGCAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLHPVTWMQIYY*YACCGQCPAEK Trigger: TTTCTCTGCTGGACATTGGCCACAGCATGCATACCAGTAATATATCTGCATCCAGGTTACTGGATGGAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAAGGTGTTTCTTGAGATTCTCTaGTTGGCTACAGAGCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ASIYSKSLEESDSRRQKVFLEIL*LATELS Trigger: ACTGAGCTCTGTAGCCAACAAGAGAATCTCAAGAAA...CACCTTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAAGGTGGTCTTTGGTGCTTTCTaGAGATTCTCTTGTTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: ASIYSKSLEESDSRRQKVVFGAF*RFSCWL Trigger: TAGCCAACAAGAGAATCTCAAGAAAGCACCAAAGAC...CACCTTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCAAGATGCAAAATGTTTGTAGCTTGGTTTCATGGCAGTATGAATGTGCCTGGCTTTCATCCACTCTaGTCTCCAGGTGAACAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FARCKMFVAWFHGSMNVPGFHPL*SPGEQG Trigger: CCCTTGTTCACCTGGAGACAAGAGTGGATGAAAGCC...AGGCACATTCATACTGCCATGAAACCAAGCTACAAACATTTTGCATCTTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR TCA 72 bp | GTCTGTGTGGGAAGAATAATAATCCCAATTCATAACTaGGAAAAGCAACTTGCTCCAAGGTCACAGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VCVGRIIIPIHN*EKQLAPRSQPW Trigger: CCAGGGCTGTGACCTTGGAGCAAGTTGCTTTTCTCAGTTATGAATTGGGATTATTATTCTTCCCACACAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR TCA 72 bp | GTCAATGAGAGAGACTTCCTCAAACAAGGGGGAAGATaGGGACCAAGACAATATAAGAGTTGTCTTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VNERDFLKQGGR*GPRQYKSCLLP Trigger: AGGCAGAAGACAACTCTTATATTGTCTTGGTCCTCATCTTCCCCCTTGTTTGAGGAAGTCTCTCTCATTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR CCA 72 bp | AACCTGGATGCAGATATATTACTGGTATGCATGCTGTaGCCAATGTCCAGCAGAGAAAACCCCAGTATTAGT | + |
|
Preference number: 3 (lower is better) Translates to: NLDADILLVCML*PMSSRENPSIS Trigger: ACTAATACTGGGGTTTTCTCTGCTGGACATTGGCCACAGCATGCATACCAGTAATATATCTGCATCCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR GCA 72 bp | GAAGATGAGGACCAAGACAATATAAGAGTTGTCTTCTaGCTTGTGAACCATGGCACATGTGCATTCACACAT | + |
|
Preference number: 3 (lower is better) Translates to: EDEDQDNIRVVF*LVNHGTCAFTH Trigger: ATGTGTGAATGCACATGTGCCATGGTTCACAAGGCAGAAGACAACTCTTATATTGTCTTGGTCCTCATCTTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| 3UTR TCA 72 bp | ACAGCTCACAAACACCAAATGCATGCATTGTATGAATaGGTGAATGAGGGAAGATTGTTTGTGTCTGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TAHKHQMHALYE*VNEGRLFVSVW Trigger: CCACACAGACACAAACAATCTTCCCTCATTCACTCATTCATACAATGCATGCATTTGGTGTTTGTGAGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACGGGGCTCAGCAGCTGTaGGTGGAGCTCACGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRPTSRAPEVWMAAQGYGAQQL*VELTVG Trigger: CCCAACCGTGAGCTCCACCCACAGCTGCTGAGCCCC...GTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGAGCGGGCAGTGTCTGTaGAGCCACAGGCTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAPEVWMAAQGYVLRLPWSGQCL*SHRLNG Trigger: ACCATTGAGCCTGTGGCTTCACAGACACTGCCCGCT...CCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGCTGCTGGTGCTCTTTTaGCGTGAGTGGCCCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPEVWMAAQGYVLRLPWLLVLF*REWPFR Trigger: CCGAAAGGGCCACTCACGTCAAAAGAGCACCAGCAG...CCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACGGGTGTTCCTCACCCTaGGCCTCCTCCCAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSRPTSRAPEVWMAAQGYGCSSP*ASSQEV Trigger: CACTTCCTGGGAGGAGGCCCAGGGTGAGGAACACCC...GTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTCTCTCGGATCTCCATaGAGGAACTGCGCAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RAPEVWMAAQGYVLRLPWSLGSP*RNCAGV Trigger: CACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGA...CCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | GGGTACTGGCTACTCAAGGGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCCTCAGCAGCTGTGGGTaGAGCTCACGGTTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GYWLLKGPLPRAELLAPSLSSCG*SSRLGE Trigger: CTCTCCCAACCGTGAGCTCCACCCACAGCTGCTGAG...GCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACCCTTGAGTAGCCAGTACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | AATGGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGGGGCTCAGCAGCTGTaGGTGGAGCTCACGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGHKGVLVSQGWKSSHPRGAQQL*VELTVG Trigger: CCCAACCGTGAGCTCCACCCACAGCTGCTGAGCCCC...TCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTGGGGTCCAGCTTTGGTaGGGCTCAGCAGCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GCWCPRAGNPATLEQPLSGVQLW*GSAAVG Trigger: ACCCACAGCTGCTGAGCCCCACCAAAGCTGGACCCC...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGCCACAGGCTCAATGGTaGGTGTGTTGTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RAPEVWMAAQGYVLRLPWPQAQW*VCCPPQ Trigger: CTGTGGAGGACAACACACTCACCATTGAGCCTGTGG...CCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCAGCGGGCAGTGTCTGTaGAGCCACAGGCTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKGVLVSQGWKSSHPRAASGQCL*SHRLNG Trigger: ACCATTGAGCCTGTGGCTTCACAGACACTGCCCGCT...GGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GGGTACTGGCTACTCAAGGGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCCTGCTGGTGCTCTTTTaGCGTGAGTGGCCCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GYWLLKGPLPRAELLAPSLLVLF*REWPFR Trigger: CCGAAAGGGCCACTCACGTCAAAAGAGCACCAGCAG...GCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACCCTTGAGTAGCCAGTACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGAGCTCCTCAAGCTCCTaGTCCAGCTGTGCACGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RAPEVWMAAQGYVLRLPWSSSSS*SSCART Trigger: AGTACGTGCACAGCTGGAGCAGGAGCTTGAGGAGCT...CCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCAGTCCGAACCAGAGCTaGGAGCTCCTGCACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRGCWCPRAGNPATLEQPSPNQS*ELLHCE Trigger: TTCACAGTGCAGGAGCTCTCAGCTCTGGTTCGGACT...GGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCAGTCCGAACCAGAGCTaGGAGCTCCTGCACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HKGVLVSQGWKSSHPRAASPNQS*ELLHCE Trigger: TTCACAGTGCAGGAGCTCTCAGCTCTGGTTCGGACT...GGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTCTGCTGGTGCTCTTTTaGCGTGAGTGGCCCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GCWCPRAGNPATLEQPLSLLVLF*REWPFR Trigger: CCGAAAGGGCCACTCACGTCAAAAGAGCACCAGCAG...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCAGCTCCTCAAGCTCCTaGTCCAGCTGTGCACGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TRGCWCPRAGNPATLEQPSSSSS*SSCART Trigger: AGTACGTGCACAGCTGGAGCAGGAGCTTGAGGAGCT...GGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | GGGTACTGGCTACTCAAGGGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCAGCTCCTCAAGCTCCTaGTCCAGCTGTGCACGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GYWLLKGPLPRAELLAPSSSSSS*SSCART Trigger: AGTACGTGCACAGCTGGAGCAGGAGCTTGAGGAGCT...GCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACCCTTGAGTAGCCAGTACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | CGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAAGGGCCCAGACTTCCTGGGTGTTCCTCACCCTaGGCCTCCTCCCAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPEAPLVAHFRKKGPRLPGCSSP*ASSQEV Trigger: CACTTCCTGGGAGGAGGCCCAGGGTGAGGAACACCC...AGGAAGTCTGGGCCCTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTGGGGCTCAGCAGCTGTaGGTGGAGCTCACGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKGPDFLATSGTGPPGDGGAQQL*VELTVG Trigger: CCCAACCGTGAGCTCCACCCACAGCTGCTGAGCCCC...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR CAA 72 bp | GGTCCTCTGTGGGCCTCTGGGTGTTTCCTGGTGGCTTaGTGGTCCTGCATATGGCTGGGCCCAGAACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPLWASGCFLVA*WSCIWLGPEPR Trigger: TCTGGGTTCTGGGCCCAGCCATATGCAGGACCACAAAGCCACCAGGAAACACCCAGAGGCCCACAGAGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCTCCCGAACCATCTTGTaGGCTTCCTCAAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKGVLVSQGWKSSHPRAASRTIL*ASSNRL Trigger: CAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGGGA...GGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTCCACAGGCTCAATGGTaGGTGTGTTGTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GCWCPRAGNPATLEQPLSPQAQW*VCCPPQ Trigger: CTGTGGAGGACAACACACTCACCATTGAGCCTGTGG...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTCCACAGGCTCAATGGTaGGTGTGTTGTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SPSRPTSRAPEVWMAAQGPQAQW*VCCPPQ Trigger: CTGTGGAGGACAACACACTCACCATTGAGCCTGTGG...ACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTCCTTCCGAAGCCTCATaGTCTCCCAGAACATCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCWCPRAGNPATLEQPLSPSEAS*SPRTSA Trigger: AGCCGATGTTCTGGGAGATCATGAGGCTTCGGAAGG...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCACCTTGGTCTTTGGTGCTCCTTCCGAAGCCTCATaGTCTCCCAGAACATCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLPRAELLAPSTLVFGAPSEAS*SPRTSA Trigger: AGCCGATGTTCTGGGAGATCATGAGGCTTCGGAAGG...AGCACCAAAGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCAAGCCTCCTTCAACTaGTTTTCCGATGTCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRGCWCPRAGNPATLEQPQASFN*FSDVAC Trigger: GCAGGCGACATCGGAAAAGCAGTTGAAGGAGGCTTG...GGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAACTCAGCAGCTGTGGGTaGAGCTCACGGTTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCPGLRPEAPLVAHFRKKLSSCG*SSRLGE Trigger: CTCTCCCAACCGTGAGCTCCACCCACAGCTGCTGAG...TTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCTTCTACCAGGCCTCCTaGGGACTCCCTGTTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TRGCWCPRAGNPATLEQPFYQAS*GLPVTF Trigger: AAAAGTAACAGGGAGTCCTCAGGAGGCCTGGTAGAA...GGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GAAATGGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAAGTCCGAACCAGAGCTaGGAGCTCCTGCACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EMATRGCWCPRAGNPATLSPNQS*ELLHCE Trigger: TTCACAGTGCAGGAGCTCTCAGCTCTGGTTCGGACT...TAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAAAGCGGGCAGTGTCTGTaGAGCCACAGGCTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GCPGLRPEAPLVAHFRKKSGQCL*SHRLNG Trigger: ACCATTGAGCCTGTGGCTTCACAGACACTGCCCGCT...TTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | CCGGTAGTCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTGGGAGGCAGAGGTGCTCTTTTGACGTaGGTGGCCCTTTCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVVHACNPYAPSGKVGGRGALLT*VALSGS Trigger: GGACCCCGAAAGGGCCACTCACGTCAAAAGAGCACC...TCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGACTACCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCACCCTAGAGCAGCCCCTTTCTGAAGATGTGGCAGCAAGAGAGCATTGGGGTGCTCTTTTGACGTaGGTGGCCCTTTCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PATLEQPLSEDVAAREHWGALLT*VALSGS Trigger: GGACCCCGAAAGGGCCACTCACGTCAAAAGAGCACC...CCAATGCTCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCTAGGGTGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCTTTTCCGATGTCGCCTaGTTCATGTTGGCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TRGCWCPRAGNPATLEQPFSDVA*FMLASR Trigger: TCGGGAAGCCAACATGAAGCAGGCGACATCGGAAAA...GGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTCAAGCCTCCTTCAACTaGTTTTCCGATGTCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCWCPRAGNPATLEQPLSQASFN*FSDVAC Trigger: GCAGGCGACATCGGAAAAGCAGTTGAAGGAGGCTTG...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCACCTTGGTCTTTGGTGCTCAAGCCTCCTTCAACTaGTTTTCCGATGTCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLPRAELLAPSTLVFGAQASFN*FSDVAC Trigger: GCAGGCGACATCGGAAAAGCAGTTGAAGGAGGCTTG...AGCACCAAAGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGATCAGGGGTAGGGATATaGCCTGCAGTGGGGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: MAAQGYVLRLPWWHTLGRSGVGI*PAVGHT Trigger: TGTGTGCCCCACTGCAGGGCATATCCCTACCCCTGA...TCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGTTTTTCCAGGGGACTaGGATAGCAGAGAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EMATRGCWCPRAGNPATLVFPGD*DSREAH Trigger: GTGGGCCTCTCTGCTATCCCAGTCCCCTGGAAAAAC...TAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCCCTGTTACTTTTGCTaGGGCCTAGGTTTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRGCWCPRAGNPATLEQPPCYFC*GLGFSR Trigger: CCTGGAAAAACCTAGGCCCCAGCAAAAGTAACAGGG...GGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | CACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCCTGTTACTTTTGCTaGGGCCTAGGTTTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKGVLVSQGWKSSHPRAAPCYFC*GLGFSR Trigger: CCTGGAAAAACCTAGGCCCCAGCAAAAGTAACAGGG...GGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | GGGTACTGGCTACTCAAGGGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCCCCTGTTACTTTTGCTaGGGCCTAGGTTTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GYWLLKGPLPRAELLAPSPCYFC*GLGFSR Trigger: CCTGGAAAAACCTAGGCCCCAGCAAAAGTAACAGGG...GCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACCCTTGAGTAGCCAGTACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | TGCTCCAAGGTCACAGCCCTGGCAGGATTCAAATCAGGGCAGGTTTGGCAGATGGGGTGTTCCTCACCCTaGGCCTCCTCCCAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSKVTALAGFKSGQVWQMGCSSP*ASSQEV Trigger: CACTTCCTGGGAGGAGGCCCAGGGTGAGGAACACCC...CATCTGCCAAACCTGCCCTGATTTGAATCCTGCCAGGGCTGTGACCTTGGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | CCGGTAGTCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTGGGAGGCAGACTCAGCAGCTGTGGGTaGAGCTCACGGTTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVVHACNPYAPSGKVGGRLSSCG*SSRLGE Trigger: CTCTCCCAACCGTGAGCTCCACCCACAGCTGCTGAG...TCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGACTACCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | ATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGACCACAGGCTCAATGGTaGGTGTGTTGTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MAAQGYVLRLPWWHTLGRPQAQW*VCCPPQ Trigger: CTGTGGAGGACAACACACTCACCATTGAGCCTGTGG...TCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | GGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAACCTTCCGAAGCCTCATaGTCTCCCAGAACATCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCPGLRPEAPLVAHFRKKPSEAS*SPRTSA Trigger: AGCCGATGTTCTGGGAGATCATGAGGCTTCGGAAGG...TTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | CCGGTAGTCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTGGGAGGCAGACTGCTGGTGCTCTTTTaGCGTGAGTGGCCCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVVHACNPYAPSGKVGGRLLVLF*REWPFR Trigger: CCGAAAGGGCCACTCACGTCAAAAGAGCACCAGCAG...TCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGACTACCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | AATGGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGACAAGCCTCCTTCAACTaGTTTTCCGATGTCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NGHKGVLVSQGWKSSHPRQASFN*FSDVAC Trigger: GCAGGCGACATCGGAAAAGCAGTTGAAGGAGGCTTG...TCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTCCCTGTTACTTTTGCTaGGGCCTAGGTTTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCWCPRAGNPATLEQPLSPCYFC*GLGFSR Trigger: CCTGGAAAAACCTAGGCCCCAGCAAAAGTAACAGGG...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | TCTCCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTCGCCTGCTTCATGTTaGCTTCCCGAACCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSRPTSRAPEVWMAAQGSPASC*LPEPSC Trigger: ACAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGA...ACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | AGAATCTGCTGCACCTTCCTAACAGAAAGCACAAAGCCCTACTGGCTGGGCAGAGGGGCTCAGCAGCTGTaGGTGGAGCTCACGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RICCTFLTESTKPYWLGRGAQQL*VELTVG Trigger: CCCAACCGTGAGCTCCACCCACAGCTGCTGAGCCCC...TCTGCCCAGCCAGTAGGGCTTTGTGCTTTCTGTTAGGAAGGTGCAGCAGATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | AATGAGGCCACTTGGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGGTGTCGGGGTCCAGCTTTGGTaGGGCTCAGCAGCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NEATWKQSEKWPQGGAGVGVQLW*GSAAVG Trigger: ACCCACAGCTGCTGAGCCCCACCAAAGCTGGACCCC...GACACCAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | AATGGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGATTCTACCAGGCCTCCTaGGGACTCCCTGTTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGHKGVLVSQGWKSSHPRFYQAS*GLPVTF Trigger: AAAAGTAACAGGGAGTCCTCAGGAGGCCTGGTAGAA...TCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | ATGGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGATCCCGAACCATCTTGTaGGCTTCCTCAAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MAAQGYVLRLPWWHTLGRSRTIL*ASSNRL Trigger: CAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGGGA...TCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GGGTACTGGCTACTCAAGGGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCTGTAGCGAATATAGGTaGAGAAGTTGCATACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GYWLLKGPLPRAELLAPSCSEYR*RSCILR Trigger: CCGCAGTATGCAACTTCTTCACCTATATTCGCTACA...GCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACCCTTGAGTAGCCAGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR GCA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTAGCTCCTCAAGCTCCTaGTCCAGCTGTGCACGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RKGPDFLATSGTGPPGDGSSSSS*SSCART Trigger: AGTACGTGCACAGCTGGAGCAGGAGCTTGAGGAGCT...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR GCA 90 bp | AATGGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGATTTTCCGATGTCGCCTaGTTCATGTTGGCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NGHKGVLVSQGWKSSHPRFSDVA*FMLASR Trigger: TCGGGAAGCCAACATGAAGCAGGCGACATCGGAAAA...TCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTACTAGCAGGGTGTGGCTGTGTTGATGGCCCCACCTGGCATCAGATCATGTCAGGGGTAGGGATATaGCCTGCAGTGGGGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLAGCGCVDGPTWHQIMSGVGI*PAVGHT Trigger: TGTGTGCCCCACTGCAGGGCATATCCCTACCCCTGA...CATGATCTGATGCCAGGTGGGGCCATCAACACAGCCACACCCTGCTAGTAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTGTTTTTCCAGGGGACTaGGATAGCAGAGAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKGPDFLATSGTGPPGDGVFPGD*DSREAH Trigger: GTGGGCCTCTCTGCTATCCCAGTCCCCTGGAAAAAC...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | GAAATGGCCACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAAGCTTCAGCTCCTTCTaGGCTTTGTATAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EMATRGCWCPRAGNPATLSFSSF*ALYSSS Trigger: GGAGGAGCTATACAAAGCCCAGAAGGAGCTGAAGCT...TAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTGGCCATTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | TCGCGTTACATTCCATTGGAAGGAAATAGGGGCGTGGTGAAGGATATGTCCAGGGGGGCTCAGCAGCTGTaGGTGGAGCTCACGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRYIPLEGNRGVVKDMSRGAQQL*VELTVG Trigger: CCCAACCGTGAGCTCCACCCACAGCTGCTGAGCCCC...CCTGGACATATCCTTCACCACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | TCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGGGCAGGGCACTTCCTaGGCTCCTCAGAGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STLFRLETFALPLGQSNEGQGTS*APQRRP Trigger: TGGACGCCTCTGAGGAGCCCAGGAAGTGCCCTGCCC...CTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS-3UTR TCA 90 bp | GTGTTTCCTGGTGGCTTTGTGGTCCTGCATATGGCTGGGCCCAGAACCCAGAAGTCCCGAACCATCTTGTaGGCTTCCTCAAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFPGGFVVLHMAGPRTQKSRTIL*ASSNRL Trigger: CAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGGGA...CTTCTGGGTTCTGGGCCCAGCCATATGCAGGACCACAAAGCCACCAGGAAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | GACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTGTTGAAGTGGAGCCACAGGCTCAATGGTaGGTGTGTTGTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DFLATSGTGPPGDGVEVEPQAQW*VCCPPQ Trigger: CTGTGGAGGACAACACACTCACCATTGAGCCTGTGG...CTCCACTTCAACACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | GACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTGTTGAAGTGGAGCCTTCCGAAGCCTCATaGTCTCCCAGAACATCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DFLATSGTGPPGDGVEVEPSEAS*SPRTSA Trigger: AGCCGATGTTCTGGGAGATCATGAGGCTTCGGAAGG...CTCCACTTCAACACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR GCA 90 bp | GACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTGTTGAAGTGGAGAGCTCCTCAAGCTCCTaGTCCAGCTGTGCACGTACT | + |
|
Preference number: 4 (lower is better) Translates to: DFLATSGTGPPGDGVEVESSSSS*SSCART Trigger: AGTACGTGCACAGCTGGAGCAGGAGCTTGAGGAGCT...CTCCACTTCAACACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | TTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTGGGTGTTCCTCACCCTaGGCCTCCTCCCAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFRLETFALPLGQSNEATGCSSP*ASSQEV Trigger: CACTTCCTGGGAGGAGGCCCAGGGTGAGGAACACCC...AGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAGGGTGTTCCTCACCCTaGGCCTCCTCCCAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPPCSDWRHLPYHWGSLGCSSP*ASSQEV Trigger: CACTTCCTGGGAGGAGGCCCAGGGTGAGGAACACCC...TAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | GGCCAGGCTGTCCTTTTGTCTGTCTCAGGACGGATGGGTGGTACGGGCTCAGAAAGCTTCAGCTCCTTCTaGGCTTTGTATAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQAVLLSVSGRMGGTGSESFSSF*ALYSSS Trigger: GGAGGAGCTATACAAAGCCCAGAAGGAGCTGAAGCT...TTCTGAGCCCGTACCACCCATCCGTCCTGAGACAGACAAAAGGACAGCCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | AGTCTAATGAGGCCACTTGGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGCTCAGCAGCTGTGGGTaGAGCTCACGGTTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLMRPLGNRVRNGHKGVLLSSCG*SSRLGE Trigger: CTCTCCCAACCGTGAGCTCCACCCACAGCTGCTGAG...CAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | CGGGCTCAGAACTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGGGGGTCCAGCTTTGGTaGGGCTCAGCAGCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAQNCLYSLVVYLSFQLLGVQLW*GSAAVG Trigger: ACCCACAGCTGCTGAGCCCCACCAAAGCTGGACCCC...CAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAGCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | TCTATGGGGGCTGGGGACACAGCAAAGGATTCTAGTCATAGTGGAGCAGGGAGGGGCAGAGGGAGCTGCTaGTGCTCTTTTGACGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SMGAGDTAKDSSHSGAGRGRGSC*CSFDVS Trigger: ACTCACGTCAAAAGAGCACCAGCAGCTCCCTCTGCC...CCTCCCTGCTCCACTATGACTAGAATCCTTTGCTGTGTCCCCAGCCCCCATAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| 3UTR CAA 72 bp | TGTGGCAGCAAGAGAGCATTGGTAAGCAGCAGGGGATaGTGTGAGGGTACTGGCTACTCAAGGGTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CGSKRALVSSRG*CEGTGYSRVLS Trigger: GGAGAGGACCCTTGAGTAGCCAGTACCCTCACACAATCCCCTGCTGCTTACCAATGCTCTCTTGCTGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | AGGCTGTCCTTTTGTCTGTCTCAGGACGGATGGGTGGTACGGGCTCAGAACTGTTCCCGAACCATCTTGTaGGCTTCCTCAAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLSFCLSQDGWVVRAQNCSRTIL*ASSNRL Trigger: CAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGGGA...ACAGTTCTGAGCCCGTACCACCCATCCGTCCTGAGACAGACAAAAGGACAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTGGTGCTCTTTTGACGTaGGTGGCCCTTTCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFRLETFALPLGQSNEATGALLT*VALSGS Trigger: GGACCCCGAAAGGGCCACTCACGTCAAAAGAGCACC...AGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | GCTTTCTTGAGATTCTCTTGTTGGCTACAGAGCTCAGTGGGCAAGAGGGTCATCGGTGCTCTTTTGACGTaGGTGGCCCTTTCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AFLRFSCWLQSSVGKRVIGALLT*VALSGS Trigger: GGACCCCGAAAGGGCCACTCACGTCAAAAGAGCACC...GATGACCCTCTTGCCCACTGAGCTCTGTAGCCAACAAGAGAATCTCAAGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCCACCCTAGAGCAGCCCCTTTCTGAAGATGTGGCAGCAAGAGAGCATTGGTTTTCCGATGTCGCCTaGTTCATGTTGGCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PATLEQPLSEDVAAREHWFSDVA*FMLASR Trigger: TCGGGAAGCCAACATGAAGCAGGCGACATCGGAAAA...CCAATGCTCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCTAGGGTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | CCGGTAGTCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTGGGAGGCAGACCCTGTTACTTTTGCTaGGGCCTAGGTTTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVVHACNPYAPSGKVGGRPCYFC*GLGFSR Trigger: CCTGGAAAAACCTAGGCCCCAGCAAAAGTAACAGGG...TCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGACTACCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCACCCTAGAGCAGCCCCTTTCTGAAGATGTGGCAGCAAGAGAGCATTGGAGCTTCAGCTCCTTCTaGGCTTTGTATAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PATLEQPLSEDVAAREHWSFSSF*ALYSSS Trigger: GGAGGAGCTATACAAAGCCCAGAAGGAGCTGAAGCT...CCAATGCTCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCTAGGGTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTTCGCCTGCTTCATGTTaGCTTCCCGAACCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKGPDFLATSGTGPPGDGSPASC*LPEPSC Trigger: ACAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGA...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTCTCAGCAGCTGTGGGTaGAGCTCACGGTTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSDWRHLPYHWGSLMRPLLSSCG*SSRLGE Trigger: CTCTCCCAACCGTGAGCTCCACCCACAGCTGCTGAG...AAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GGGCAGTTATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGAGTCCGAACCAGAGCTaGGAGCTCCTGCACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GQLSLHLVQIGDICPTTGSPNQS*ELLHCE Trigger: TTCACAGTGCAGGAGCTCTCAGCTCTGGTTCGGACT...CCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCCCACAGGCTCAATGGTaGGTGTGTTGTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TLFRLETFALPLGQSNEAPQAQW*VCCPPQ Trigger: CTGTGGAGGACAACACACTCACCATTGAGCCTGTGG...GGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | CGGGCTCAGAACTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGAGCGGGCAGTGTCTGTaGAGCCACAGGCTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAQNCLYSLVVYLSFQLLSGQCL*SHRLNG Trigger: ACCATTGAGCCTGTGGCTTCACAGACACTGCCCGCT...CAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAGCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCCCTTCCGAAGCCTCATaGTCTCCCAGAACATCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLFRLETFALPLGQSNEAPSEAS*SPRTSA Trigger: AGCCGATGTTCTGGGAGATCATGAGGCTTCGGAAGG...GGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | GACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTGTTGAAGTGGAGTTTTCCGATGTCGCCTaGTTCATGTTGGCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DFLATSGTGPPGDGVEVEFSDVA*FMLASR Trigger: TCGGGAAGCCAACATGAAGCAGGCGACATCGGAAAA...CTCCACTTCAACACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCTTGGGGTTGGCTGTGTaGATCCCAGGTCTCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLFRLETFALPLGQSNEALGLAV*IPGLLS Trigger: AGAGAGGAGACCTGGGATGCACACAGCCAACCCCAA...GGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
||
| CDS-3UTR CCA 90 bp | ACTGAGAAAAGCAACTTGCTCCAAGGTCACAGCCCTGGCAGGATTCAAATCAGGTCTCTCGGATCTCCATaGAGGAACTGCGCAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TEKSNLLQGHSPGRIQIRSLGSP*RNCAGV Trigger: CACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGA...CCTGATTTGAATCCTGCCAGGGCTGTGACCTTGGAGCAAGTTGCTTTTCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTAATGAGGCCACTTGGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGGGCAGAGGGAGCTGCTaGTGCTCTTTTGACGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLMRPLGNRVRNGHKGVLGRGSC*CSFDVS Trigger: ACTCACGTCAAAAGAGCACCAGCAGCTCCCTCTGCC...CAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR CAA 72 bp | GGGTGGTACGGGCTCAGAACTGTCTCTACAGCCTGGTaGTTTATCTGTCCTTTCAGCTTCTGGCTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWYGLRTVSTAW*FICPFSFWLRA Trigger: AGCTCTGAGCCAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAGCCCGTACCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| 3UTR CAA 72 bp | ACCTTCAGAGCACTTCGGGGCAGTTATCTCTCCACCTaGTTCAGATTGGAGACATTTGCCCTACCACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFRALRGSYLST*FRLETFALPLG Trigger: CCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCCCGAAGTGCTCTGAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR CAA 72 bp | GTCTTCAGAGCACTTCGGGGCAGTTATCTCTCCACCTaGTTCAGATTGGAGACATTTGCCCTACCACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFRALRGSYLST*FRLETFALPLG Trigger: CCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCCCGAAGTGCTCTGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144788.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTAATGAGGCCACTTGGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGTCCCGAACCATCTTGTaGGCTTCCTCAAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLMRPLGNRVRNGHKGVLSRTIL*ASSNRL Trigger: CAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGGGA...CAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | TGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTAGTCCGAACCAGAGCTaGGAGCTCCTGCACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSDWRHLPYHWGSLMRPLSPNQS*ELLHCE Trigger: TTCACAGTGCAGGAGCTCTCAGCTCTGGTTCGGACT...AAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCGCCTAGCCCCTACCAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTAGCGGGCAGTGTCTGTaGAGCCACAGGCTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPSPYQQSLPLLNRDRVSGQCL*SHRLNG Trigger: ACCATTGAGCCTGTGGCTTCACAGACACTGCCCGCT...AACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTGGTAGGGGCTAGGCGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTTGTAGCGAATATAGGTaGAGAAGTTGCATACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RKGPDFLATSGTGPPGDGCSEYR*RSCILR Trigger: CCGCAGTATGCAACTTCTTCACCTATATTCGCTACA...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | TCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGATAGCGGACAGTGCCTaGGCTCATGGCCAAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: STLFRLETFALPLGQSNEIADSA*AHGQEH Trigger: GTGTTCTTGGCCATGAGCTCAGGCACTGTCCGCTAT...CTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS-3UTR GCA 90 bp | CTGCCGCCTAGCCCCTACCAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTTCAGGGGTAGGGATATaGCCTGCAGTGGGGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: LPPSPYQQSLPLLNRDRVSGVGI*PAVGHT Trigger: TGTGTGCCCCACTGCAGGGCATATCCCTACCCCTGA...AACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTGGTAGGGGCTAGGCGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | ATATCTCAGGTGCTGCACCAAGATGGTAAAGTGAGACATCTCAGGGTCCTGCACGTTTTTCCAGGGGACTaGGATAGCAGAGAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISQVLHQDGKVRHLRVLHVFPGD*DSREAH Trigger: GTGGGCCTCTCTGCTATCCCAGTCCCCTGGAAAAAC...GTGCAGGACCCTGAGATGTCTCACTTTACCATCTTGGTGCAGCACCTGAGATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | CGGGCTCAGAACTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGGTTTTTCCAGGGGACTaGGATAGCAGAGAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RAQNCLYSLVVYLSFQLLVFPGD*DSREAH Trigger: GTGGGCCTCTCTGCTATCCCAGTCCCCTGGAAAAAC...CAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAGCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | CTCAGAACTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGGCTCTCTCTCGGATCTCCATaGAGGAACTGCGCAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRTVSTAWLFICPFSFWLSLGSP*RNCAGV Trigger: CACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGA...GAGCCAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | AATGAGGCCACTTGGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGGTGTCAGCTTCAGCTCCTTCTaGGCTTTGTATAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NEATWKQSEKWPQGGAGVSFSSF*ALYSSS Trigger: GGAGGAGCTATACAAAGCCCAGAAGGAGCTGAAGCT...GACACCAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | TCGCGTTACATTCCATTGGAAGGAAATAGGGGCGTGGTGAAGGATATGTCCAGGGGCAGAGGGAGCTGCTaGTGCTCTTTTGACGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRYIPLEGNRGVVKDMSRGRGSC*CSFDVS Trigger: ACTCACGTCAAAAGAGCACCAGCAGCTCCCTCTGCC...CCTGGACATATCCTTCACCACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | TCGCGTTACATTCCATTGGAAGGAAATAGGGGCGTGGTGAAGGATATGTCCAGGCAGTGCCTGAGCTCATaGCCAAGAACACTGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRYIPLEGNRGVVKDMSRQCLSS*PRTLGM Trigger: CATGCCCAGTGTTCTTGGCCATGAGCTCAGGCACTG...CCTGGACATATCCTTCACCACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS-3UTR TCA 90 bp | TCGCGTTACATTCCATTGGAAGGAAATAGGGGCGTGGTGAAGGATATGTCCAGGTCCCGAACCATCTTGTaGGCTTCCTCAAACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRYIPLEGNRGVVKDMSRSRTIL*ASSNRL Trigger: CAGCCTGTTTGAGGAAGCTCACAAGATGGTTCGGGA...CCTGGACATATCCTTCACCACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR TCA 90 bp | GCTTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAAGGTGAGCGGGCAGTGTCTGTaGAGCCACAGGCTCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASIYSKSLEESDSRRQKVSGQCL*SHRLNG Trigger: ACCATTGAGCCTGTGGCTTCACAGACACTGCCCGCT...CACCTTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
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| CDS-3UTR GCA 90 bp | ACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCTTTTCCGATGTCGCCTaGTTCATGTTGGCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLFRLETFALPLGQSNEAFSDVA*FMLASR Trigger: TCGGGAAGCCAACATGAAGCAGGCGACATCGGAAAA...GGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR GCA 90 bp | CGGGCTCAGAACTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGCAAGCCTCCTTCAACTaGTTTTCCGATGTCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAQNCLYSLVVYLSFQLLQASFN*FSDVAC Trigger: GCAGGCGACATCGGAAAAGCAGTTGAAGGAGGCTTG...CAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | AGAATCTGCTGCACCTTCCTAACAGAAAGCACAAAGCCCTACTGGCTGGGCAGATCGCCTGCTTCATGTTaGCTTCCCGAACCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RICCTFLTESTKPYWLGRSPASC*LPEPSC Trigger: ACAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGA...TCTGCCCAGCCAGTAGGGCTTTGTGCTTTCTGTTAGGAAGGTGCAGCAGATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | AGTCTAATGAGGCCACTTGGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGTCGCCTGCTTCATGTTaGCTTCCCGAACCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLMRPLGNRVRNGHKGVLSPASC*LPEPSC Trigger: ACAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGA...CAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGTTATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGTCGCCTGCTTCATGTTaGCTTCCCGAACCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQLSLHLVQIGDICPTTGSPASC*LPEPSC Trigger: ACAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGA...CCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | GGACTCTATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGGGGGTCCAGCTTTGGTaGGGCTCAGCAGCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLYAGSPRDICIYINRYQGVQLW*GSAAVG Trigger: ACCCACAGCTGCTGAGCCCCACCAAAGCTGGACCCC...CTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCATAGAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| 3UTR CAA 72 bp | GCACTTCGGGGCAGTTATCTCTCCACCTTGTTCAGATaGGAGACATTTGCCCTACCACTGGGGCAGTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALRGSYLSTLFR*ETFALPLGQSN Trigger: ATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCCCGAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGGCTCAGAGCTGTTCTACCAGGCCTCCTaGGGACTCCCTGTTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLQPGCLSVLSASGSELFYQAS*GLPVTF Trigger: AAAAGTAACAGGGAGTCCTCAGGAGGCCTGGTAGAA...CAGCTCTGAGCCAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | TGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTTTCTACCAGGCCTCCTaGGGACTCCCTGTTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSDWRHLPYHWGSLMRPLFYQAS*GLPVTF Trigger: AAAAGTAACAGGGAGTCCTCAGGAGGCCTGGTAGAA...AAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTTGAGATTCTCTTGTTGGCTACAGAGCTCAGTGGGCAAGAGGGTCATCTTTTCCGATGTCGCCTaGTTCATGTTGGCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: AFLRFSCWLQSSVGKRVIFSDVA*FMLASR Trigger: TCGGGAAGCCAACATGAAGCAGGCGACATCGGAAAA...GATGACCCTCTTGCCCACTGAGCTCTGTAGCCAACAAGAGAATCTCAAGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | CGGGCTCAGAACTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGAGCTTCAGCTCCTTCTaGGCTTTGTATAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAQNCLYSLVVYLSFQLLSFSSF*ALYSSS Trigger: GGAGGAGCTATACAAAGCCCAGAAGGAGCTGAAGCT...CAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAGCCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTAGCTTCAGCTCCTTCTaGGCTTTGTATAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFRLETFALPLGQSNEATSFSSF*ALYSSS Trigger: GGAGGAGCTATACAAAGCCCAGAAGGAGCTGAAGCT...AGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | CGGGCTCAGAACTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGTCGCCTGCTTCATGTTaGCTTCCCGAACCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAQNCLYSLVVYLSFQLLSPASC*LPEPSC Trigger: ACAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGA...CAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAGCCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTAATGAGGCCACTTGGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGTGTAGCGAATATAGGTaGAGAAGTTGCATACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLMRPLGNRVRNGHKGVLCSEYR*RSCILR Trigger: CCGCAGTATGCAACTTCTTCACCTATATTCGCTACA...CAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GGACTCTATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGCTGCTGGTGCTCTTTTaGCGTGAGTGGCCCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLYAGSPRDICIYINRYQLLVLF*REWPFR Trigger: CCGAAAGGGCCACTCACGTCAAAAGAGCACCAGCAG...CTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCATAGAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAAGGCAGAGGGAGCTGCTaGTGCTCTTTTGACGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CCFHLQQISRGIRFTEAEGRGSC*CSFDVS Trigger: ACTCACGTCAAAAGAGCACCAGCAGCTCCCTCTGCC...TTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAAGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GGACTCTATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGAGTCCGAACCAGAGCTaGGAGCTCCTGCACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLYAGSPRDICIYINRYQSPNQS*ELLHCE Trigger: TTCACAGTGCAGGAGCTCTCAGCTCTGGTTCGGACT...CTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCATAGAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTCTTGAGATTCTCTTGTTGGCTACAGAGCTCAGTGGGCAAGAGGGTCATCTGTAGCGAATATAGGTaGAGAAGTTGCATACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AFLRFSCWLQSSVGKRVICSEYR*RSCILR Trigger: CCGCAGTATGCAACTTCTTCACCTATATTCGCTACA...GATGACCCTCTTGCCCACTGAGCTCTGTAGCCAACAAGAGAATCTCAAGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTATGTAGCGAATATAGGTaGAGAAGTTGCATACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISPPCSDWRHLPYHWGSLCSEYR*RSCILR Trigger: CCGCAGTATGCAACTTCTTCACCTATATTCGCTACA...TAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | TTTGCAAGATGCAAAATGTTTGTAGCTTGGTTTCATGGCAGTATGAATGTGCCTGGTGCTCTTTTGACGTaGGTGGCCCTTTCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FARCKMFVAWFHGSMNVPGALLT*VALSGS Trigger: GGACCCCGAAAGGGCCACTCACGTCAAAAGAGCACC...AGGCACATTCATACTGCCATGAAACCAAGCTACAAACATTTTGCATCTTGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | GGACTCTATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGGTTTTTCCAGGGGACTaGGATAGCAGAGAGGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLYAGSPRDICIYINRYQVFPGD*DSREAH Trigger: GTGGGCCTCTCTGCTATCCCAGTCCCCTGGAAAAAC...CTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCATAGAGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | TGGATAAACACAGTGGGCTGTTACACATACATCAGAATATTACCAAGTCTTAAAAGGTCGGCTCGTAGGTaGGGTGGATGGCCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WINTVGCYTYIRILPSLKRSARR*GGWPCW Trigger: CCAGCAAGGCCATCCACCTCACCTACGAGCCGACCT...TTTAAGACTTGGTAATATTCTGATGTATGTGTAACAGCCCACTGTGTTTATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | CAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTACATTCCATTGGAAGGAATCTCTCGGATCTCCATaGAGGAACTGCGCAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQSLPLLNRDRVTFHWKESLGSP*RNCAGV Trigger: CACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGA...TTCCTTCCAATGGAATGTAACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| 3UTR CAA 72 bp | ACCACTGAGGTAAATAAACCCAACCTCAGGACCTCTTaGTGTTCTCCAGTGCCTCTATCCATTTACATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTEVNKPNLRTS*CSPVPLSIYMR Trigger: CCTCATGTAAATGGATAGAGGCACTGGAGAACACAAAGAGGTCCTGAGGTTGGGTTTATTTACCTCAGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | CAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTACATTCCATTGGAAGGAAGCGTCGTATCCACCTTaGCCCAAGCCTCCTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: QQSLPLLNRDRVTFHWKEASYPP*PKPPST Trigger: AGTTGAAGGAGGCTTGGGGCAAGGTGGATACGACGC...TTCCTTCCAATGGAATGTAACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117641.8 |
||
| CDS-3UTR GCA 90 bp | TGGATAAACACAGTGGGCTGTTACACATACATCAGAATATTACCAAGTCTTAAATCAGGGGTAGGGATATaGCCTGCAGTGGGGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: WINTVGCYTYIRILPSLKSGVGI*PAVGHT Trigger: TGTGTGCCCCACTGCAGGGCATATCCCTACCCCTGA...TTTAAGACTTGGTAATATTCTGATGTATGTGTAACAGCCCACTGTGTTTATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| CDS-3UTR GCA 90 bp | CAACAAAGCCTTCCTTTATTAAATAGAGATCGCGTTACATTCCATTGGAAGGAAGAGCATAGCGGACAGTaGCTGAGCTCATGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QQSLPLLNRDRVTFHWKEEHSGQ*LSSWPR Trigger: TCTTGGCCATGAGCTCAGGCACTGTCCGCTATGCTC...TTCCTTCCAATGGAATGTAACGCGATCTCTATTTAATAAAGGAAGGCTTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
||
| CDS-3UTR CCA 90 bp | AAATTTACTAACGGTAATTTATTCAAAGGACTCTATGCAGGGTCTCCAAGAGATTCTCTCGGATCTCCATaGAGGAACTGCGCAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KFTNGNLFKGLYAGSPRDSLGSP*RNCAGV Trigger: CACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGA...ATCTCTTGGAGACCCTGCATAGAGTCCTTTGAATAAATTACCGTTAGTAAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | TTTGCAAGATGCAAAATGTTTGTAGCTTGGTTTCATGGCAGTATGAATGTGCCTTTCTACCAGGCCTCCTaGGGACTCCCTGTTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FARCKMFVAWFHGSMNVPFYQAS*GLPVTF Trigger: AAAAGTAACAGGGAGTCCTCAGGAGGCCTGGTAGAA...AGGCACATTCATACTGCCATGAAACCAAGCTACAAACATTTTGCATCTTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR CCA 90 bp | AAATTTACTAACGGTAATTTATTCAAAGGACTCTATGCAGGGTCTCCAAGAGATGGCAGAGGGAGCTGCTaGTGCTCTTTTGACGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KFTNGNLFKGLYAGSPRDGRGSC*CSFDVS Trigger: ACTCACGTCAAAAGAGCACCAGCAGCTCCCTCTGCC...ATCTCTTGGAGACCCTGCATAGAGTCCTTTGAATAAATTACCGTTAGTAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| CDS-3UTR TCA 90 bp | TGGATAAACACAGTGGGCTGTTACACATACATCAGAATATTACCAAGTCTTAAATGTAGCGAATATAGGTaGAGAAGTTGCATACTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WINTVGCYTYIRILPSLKCSEYR*RSCILR Trigger: CCGCAGTATGCAACTTCTTCACCTATATTCGCTACA...TTTAAGACTTGGTAATATTCTGATGTATGTGTAACAGCCCACTGTGTTTATCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| CDS TCA 90 bp | CTCGGAGCCCTTCTCTCGGATCTCCATGGAGGAACTGCGCAGGCGTaGCACATCCAGTGGAGCAGGTGCCGGGTGTTCCTCACCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGALLSDLHGGTAQA*HIQWSRCRVFLTLG Trigger: GCCCAGGGTGAGGAACACCCGGCACCTGCTCCACTGGATGTGTCACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGAAGGGCTCCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS CCA 90 bp | AGGCGTGACACATCCAGTGGAGCAGGTGCCGGGTGTTCCTCACCCTaGGCCTCCTCCCAGGAAGTGGAGGCTTCTACCAGGCCTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRDTSSGAGAGCSSP*ASSQEVEASTRPPE Trigger: CTCAGGAGGCCTGGTAGAAGCCTCCACTTCCTGGGAGGAGGCCCAGGGTGAGGAACACCCGGCACCTGCTCCACTGGATGTGTCACGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS CCA 90 bp | GAGCAGGTGCCGGGTGTTCCTCACCCTGGGCCTCCTCCCAGGAAGTaGAGGCTTCTACCAGGCCTCCTGAGGACTCCCTGTTACTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EQVPGVPHPGPPPRK*RLLPGLLRTPCYFC Trigger: GCAAAAGTAACAGGGAGTCCTCAGGAGGCCTGGTAGAAGCCTCCACTTCCTGGGAGGAGGCCCAGGGTGAGGAACACCCGGCACCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS CCA 90 bp | CAGGACCCACACCTGATGGAGCATAGCGGACAGTGCCTGAGCTCATaGCCAAGAACACTGGGCATGACCCTCGGGCAGGGCACTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QDPHLMEHSGQCLSS*PRTLGMTLGQGTSW Trigger: CCAGGAAGTGCCCTGCCCGAGGGTCATGCCCAGTGTTCTTGGCCATGAGCTCAGGCACTGTCCGCTATGCTCCATCAGGTGTGGGTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTTTTCGGGGTCCAGCTTaGGTGGGGCTCAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GCWCPRAGNPATLEQPLSFRGPA*VGLSSC Trigger: ACAGCTGCTGAGCCCCACCAAAGCTGGACCCCGAAA...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CAA 90 bp | GGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCACCTTGGTCTTTGGTGCTTTTCGGGGTCCAGCTTaGGTGGGGCTCAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPLPRAELLAPSTLVFGAFRGPA*VGLSSC Trigger: ACAGCTGCTGAGCCCCACCAAAGCTGGACCCCGAAA...AGCACCAAAGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS GCA 90 bp | CAGCCCAGGCTCCTTGCCTTCTTTGTCAGGGGTAGGGATATGCCCTaGAGTGGGGCACACAACAGGGCAGAGGGAGCTGCTGGTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QPRLLAFFVRGRDMP*SGAHNRAEGAAGAL Trigger: AAGAGCACCAGCAGCTCCCTCTGCCCTGTTGTGTGCCCCACTGCAGGGCATATCCCTACCCCTGACAAAGAAGGCAAGGAGCCTGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238672.2 |
||
| CDS GCA 90 bp | CCTTTAGGAACTCGGAGCCCTTCTCTCGGATCTCCATGGAGGAACTaGGCAGGCGTGACACATCCAGTGGAGCAGGTGCCGGGTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGTRSPSLGSPWRN*AGVTHPVEQVPGVP Trigger: AGGAACACCCGGCACCTGCTCCACTGGATGTGTCACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGAAGGGCTCCGAGTTCCTAAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS GCA 90 bp | AGCGTCGTATCCACCTCCTTGCCTTCTTTGTCAGGGGTAGGGATATaGCCTGCAGTGGGGCACACAACAGGGCAGAGGGAGCTGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVVSTSLPSLSGVGI*PAVGHTTGQRELLV Trigger: CACCAGCAGCTCCCTCTGCCCTGTTGTGTGCCCCACTGCAGGGCATATCCCTACCCCTGACAAAGAAGGCAAGGAGGTGGATACGACGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 |
||
| CDS GCA 90 bp | TCCTCTCAGGTACAGGACCCACACCTGATGGAGCATAGCGGACAGTaGCTGAGCTCATGGCCAAGAACACTGGGCATGACCCTCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSQVQDPHLMEHSGQ*LSSWPRTLGMTLGQ Trigger: CTGCCCGAGGGTCATGCCCAGTGTTCTTGGCCATGAGCTCAGGCACTGTCCGCTATGCTCCATCAGGTGTGGGTCCTGTACCTGAGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
||
| CDS CCA 90 bp | GGGACTGGGATAGCAGAGAGGCCCACAGGGAGGCCCTCGTCTTGTTaGGGTTGGCTGTGTGCATCCCAGGTCTCCTCTCTAAAGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTGIAERPTGRPSSC*GWLCASQVSSLKFL Trigger: GAGGAACTTTAGAGAGGAGACCTGGGATGCACACAGCCAACCCCAACAAGACGAGGGCCTCCCTGTGGGCCTCTCTGCTATCCCAGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTGTCGCCTGCTTCATGTaGGCTTCCCGAACCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCWCPRAGNPATLEQPLSVACFM*ASRTIL Trigger: CAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGAC...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTGGGAAGAAGCCAAGCTaGGCTAGTGACATGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GCWCPRAGNPATLEQPLSGKKPS*ASDMPF Trigger: GAAGGGCATGTCACTAGCCAAGCTTGGCTTCTTCCC...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | CACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCTGTAGCATGTCGATCTaGCCCCAAGCCTCCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HKGVLVSQGWKSSHPRAACSMSI*PQASFN Trigger: GTTGAAGGAGGCTTGGGGCAAGATCGACATGCTACA...GGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS TCA 90 bp | TGTCCTCCACAGCAGTCCGAACCAGAGCTGAGAGCTCCTGCACTGTaGAGTCAAGGCAAGGGCCCACGTCCTCCCGGTACACCCTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CPPQQSEPELRAPAL*SQGKGPRPPGTPFL Trigger: TAGAAAGGGTGTACCGGGAGGACGTGGGCCCTTGCCTTGACTTCACAGTGCAGGAGCTCTCAGCTCTGGTTCGGACTGCTGTGGAGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS GCA 90 bp | GTGGCTGTCAGAGTCCCCCAGGCGGATTCGATGGTGGCAGGTACGTaGCAGGCCACTCAGGGCACATGTGTTGGTGTTGTTACACTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VAVRVPQADSMVAGT*QATQGTCVGVVTLN Trigger: GTTGAGTGTAACAACACCAACACATGTGCCCTGAGTGGCCTGGCACGTACCTGCCACCATCGAATCCGCCTGGGGGACTCTGACAGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS GCA 90 bp | CGTATCCACCTCCTTGCCTTCTTTGTCAGGGGTAGGGATATGCCCTaGAGTGGGGCACACAACAGGGCAGAGGGAGCTGCTGGTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RIHLLAFFVRGRDMP*SGAHNRAEGAAGAL Trigger: AAGAGCACCAGCAGCTCCCTCTGCCCTGTTGTGTGCCCCACTGCAGGGCATATCCCTACCCCTGACAAAGAAGGCAAGGAGGTGGATACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 |
||
| CDS GCA 90 bp | AGAGAGGCCCACAGGGAGGCCCTCGTCTTGTTGGGGTTGGCTGTGTaGATCCCAGGTCTCCTCTCTAAAGTTCCTCTCAGGTACAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: REAHREALVLLGLAV*IPGLLSKVPLRYRT Trigger: GGTCCTGTACCTGAGAGGAACTTTAGAGAGGAGACCTGGGATGCACACAGCCAACCCCAACAAGACGAGGGCCTCCCTGTGGGCCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
||
| CDS CCA 90 bp | ATAGCTCCTCCTTTAGGAACTCGGAGCCCTTCTCTCGGATCTCCATaGAGGAACTGCGCAGGCGTGACACATCCAGTGGAGCAGGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IAPPLGTRSPSLGSP*RNCAGVTHPVEQVP Trigger: CGGCACCTGCTCCACTGGATGTGTCACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGAAGGGCTCCGAGTTCCTAAAGGAGGAGCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS CCA 90 bp | GGGATAGCAGAGAGGCCCACAGGGAGGCCCTCGTCTTGTTGGGGTTaGCTGTGTGCATCCCAGGTCTCCTCTCTAAAGTTCCTCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GIAERPTGRPSSCWG*LCASQVSSLKFLSG Trigger: ACCTGAGAGGAACTTTAGAGAGGAGACCTGGGATGCACACAGCCAACCCCAACAAGACGAGGGCCTCCCTGTGGGCCTCTCTGCTATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTTCAATGGTGAGTGTGTaGTCCTCCACAGCAGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GCWCPRAGNPATLEQPLSSMVSV*SSTAVR Trigger: TCGGACTGCTGTGGAGGACAACACACTCACCATTGA...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | CACAAGGGGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCGCACATGTGTTGGTGTaGTTACACTCAACAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HKGVLVSQGWKSSHPRAAAHVLV*LHSTVG Trigger: GCCCACTGTTGAGTGTAACAACACCAACACATGTGC...GGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCCCCTTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GGGTACTGGCTACTCAAGGGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCCTGCCGAACCAGACCTaGCTGGATGTAGCGAATATA | + |
|
Preference number: 5 (lower is better) Translates to: GYWLLKGPLPRAELLAPSLPNQT*LDVANI Trigger: TATATTCGCTACATCCAGCAAGGTCTGGTTCGGCAG...GCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACCCTTGAGTAGCCAGTACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCACCTTGGTCTTTGGTGCTTGTAGCATGTCGATCTaGCCCCAAGCCTCCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GPLPRAELLAPSTLVFGACSMSI*PQASFN Trigger: GTTGAAGGAGGCTTGGGGCAAGATCGACATGCTACA...AGCACCAAAGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTGTCGTATCCACCTCCTaGCCTTCTTTGTCAGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GCWCPRAGNPATLEQPLSVVSTS*PSLSGV Trigger: TACCCCTGACAAAGAAGGCAAGGAGGTGGATACGAC...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 |
||
| CDS CCA 90 bp | TTCGATGGTGGCAGGTACGTGCCAGGCCACTCAGGGCACATGTGTTaGTGTTGTTACACTCAACAGTGGGCACCTTCACAGCGGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FDGGRYVPGHSGHMC*CCYTQQWAPSQRAV Trigger: CACTGCCCGCTGTGAAGGTGCCCACTGTTGAGTGTAACAACACCAACACATGTGCCCTGAGTGGCCTGGCACGTACCTGCCACCATCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCTCTCCCCAGGGCTGAGCTCCTTGCTCCGAGCACCTTGGTCTTTGGTGCTGACTCCCTGTTACTTTaGCTGGGGCCTAGGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPLPRAELLAPSTLVFGADSLLL*LGPRFF Trigger: GAAAAACCTAGGCCCCAGCAAAAGTAACAGGGAGTC...AGCACCAAAGACCAAGGTGCTCGGAGCAAGGAGCTCAGCCCTGGGGAGAGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACGACTCCCTGTTACTTTaGCTGGGGCCTAGGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSRPTSRAPEVWMAAQGYDSLLL*LGPRFF Trigger: GAAAAACCTAGGCCCCAGCAAAAGTAACAGGGAGTC...GTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGCCCAGGGTTACGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAAGTCGCCTGCTTCATGTaGGCTTCCCGAACCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCPGLRPEAPLVAHFRKKVACFM*ASRTIL Trigger: CAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGAC...TTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACGTAACCCTGGGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | CGTCCTGAGGCTCCCCTGGTGGCACACTTTAGGAAGAAAGGGCCCAGACTTCCTGTCGCCTGCTTCATGTaGGCTTCCCGAACCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPEAPLVAHFRKKGPRLPVACFM*ASRTIL Trigger: CAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGAC...AGGAAGTCTGGGCCCTTTCTTCCTAAAGTGTGCCACCAGGGGAGCCTCAGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTGCACATGTGTTGGTGTaGTTACACTCAACAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCWCPRAGNPATLEQPLSAHVLV*LHSTVG Trigger: GCCCACTGTTGAGTGTAACAACACCAACACATGTGC...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTGGTGTCCCAGGGCTGGAAATCCAGCCACCCTAGAGCAGCCCCTTTCTCTGCCGAACCAGACCTaGCTGGATGTAGCGAATATA | + |
|
Preference number: 5 (lower is better) Translates to: GCWCPRAGNPATLEQPLSLPNQT*LDVANI Trigger: TATATTCGCTACATCCAGCAAGGTCTGGTTCGGCAG...AGAAAGGGGCTGCTCTAGGGTGGCTGGATTTCCAGCCCTGGGACACCAGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS CCA 90 bp | AGGAAGGGGCAGCTCTTATCCAGGGTAGGTGAAGCTCTCCAAGCTTaGAACTCTGCAAACAGCGTCGTATCCACCTTGCCCCAAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKGQLLSRVGEALQA*NSANSVVSTLPQAS Trigger: GGAGGCTTGGGGCAAGGTGGATACGACGCTGTTTGCAGAGTTCCAAGCTTGGAGAGCTTCACCTACCCTGGATAAGAGCTGCCCCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117641.8 |
||
| CDS CCA 90 bp | CCAGGCCACTCAGGGCACATGTGTTGGTGTTGTTACACTCAACAGTaGGCACCTTCACAGCGGGCAGTGTCTGTGAAGCCACAGGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PGHSGHMCWCCYTQQ*APSQRAVSVKPQAQ Trigger: TTGAGCCTGTGGCTTCACAGACACTGCCCGCTGTGAAGGTGCCCACTGTTGAGTGTAACAACACCAACACATGTGCCCTGAGTGGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTGTCGCCTGCTTCATGTaGGCTTCCCGAACCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKGPDFLATSGTGPPGDGVACFM*ASRTIL Trigger: CAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGAC...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCCGTCCTACATCCAGGGCCCCTGAAGTCTGGATGGCTGCCCAGGGTTACCTCAGGGCACATGTGTaGGTGTTGTTACACTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: PSRPTSRAPEVWMAAQGYLRAHV*VLLHST Trigger: TGTTGAGTGTAACAACACCAACACATGTGCCCTGAG...GTAACCCTGGGCAGCCATCCAGACTTCAGGGGCCCTGGATGTAGGACGGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | CCAGCCACCCTAGAGCAGCCCCTTTCTGAAGATGTGGCAGCAAGAGAGCATTGGGGGAAGAAGCCAAGCTaGGCTAGTGACATGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PATLEQPLSEDVAAREHWGKKPS*ASDMPF Trigger: GAAGGGCATGTCACTAGCCAAGCTTGGCTTCTTCCC...CCAATGCTCTCTTGCTGCCACATCTTCAGAAAGGGGCTGCTCTAGGGTGGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | AATGAGGCCACTTGGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGGTGTCTTTCGGGGTCCAGCTTaGGTGGGGCTCAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NEATWKQSEKWPQGGAGVFRGPA*VGLSSC Trigger: ACAGCTGCTGAGCCCCACCAAAGCTGGACCCCGAAA...GACACCAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS TCA 90 bp | GGAAGAAGCCAAGCTTGGCTAGTGACATGCCCTTCCGAAGCCTCATaGTCTCCCAGAACATCGGCTCAGCATCCTGCCGAACCAGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRSQAWLVTCPSEAS*SPRTSAQHPAEPDL Trigger: AAGGTCTGGTTCGGCAGGATGCTGAGCCGATGTTCTGGGAGATCATGAGGCTTCGGAAGGGCATGTCACTAGCCAAGCTTGGCTTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGTCCTTTTGTCTGTCTCAGGACGGATGGGTGGTACGGGCTCAGAACTGTGTCGCCTGCTTCATGTaGGCTTCCCGAACCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLSFCLSQDGWVVRAQNCVACFM*ASRTIL Trigger: CAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGAC...ACAGTTCTGAGCCCGTACCACCCATCCGTCCTGAGACAGACAAAAGGACAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTTCAATGGTGAGTGTGTaGTCCTCCACAGCAGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RKGPDFLATSGTGPPGDGSMVSV*SSTAVR Trigger: TCGGACTGCTGTGGAGGACAACACACTCACCATTGA...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTTGTAGCATGTCGATCTaGCCCCAAGCCTCCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RKGPDFLATSGTGPPGDGCSMSI*PQASFN Trigger: GTTGAAGGAGGCTTGGGGCAAGATCGACATGCTACA...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS GCA 90 bp | TCTGCAAACAGCGTCGTATCCACCTTGCCCCAAGCCTCCTTCAACTaGTTTTCCGATGTCGCCTGCTTCATGTTGGCTTCCCGAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: SANSVVSTLPQASFN*FSDVACFMLASRTI Trigger: GATGGTTCGGGAAGCCAACATGAAGCAGGCGACATCGGAAAAGCAGTTGAAGGAGGCTTGGGGCAAGGTGGATACGACGCTGTTTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117641.8 |
||
| CDS CCA 90 bp | AGGAAGGGGCAGCTCTTATCCAGGGTAGGTGAAGCTCTCCAAGCTTaGAACTCTGCAAACAGCGTCGTATCCACCTGTCGGGAAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RKGQLLSRVGEALQA*NSANSVVSTCREKE Trigger: CTCCTTTTCCCGACAGGTGGATACGACGCTGTTTGCAGAGTTCCAAGCTTGGAGAGCTTCACCTACCCTGGATAAGAGCTGCCCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | CCGGTAGTCCATGCCTGTAATCCCTATGCTCCTAGTGGGAAGGTGGGAGGCAGAGCACATGTGTTGGTGTaGTTACACTCAACAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PVVHACNPYAPSGKVGGRAHVLV*LHSTVG Trigger: GCCCACTGTTGAGTGTAACAACACCAACACATGTGC...TCTGCCTCCCACCTTCCCACTAGGAGCATAGGGATTACAGGCATGGACTACCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTCTGCCGAACCAGACCTaGCTGGATGTAGCGAATATA | + |
|
Preference number: 5 (lower is better) Translates to: RKGPDFLATSGTGPPGDGLPNQT*LDVANI Trigger: TATATTCGCTACATCCAGCAAGGTCTGGTTCGGCAG...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCCTGGTGGCTTTGTGGTCCTGCATATGGCTGGGCCCAGAACCCAGAAGCTGCCGAACCAGACCTaGCTGGATGTAGCGAATATA | + |
|
Preference number: 5 (lower is better) Translates to: VFPGGFVVLHMAGPRTQKLPNQT*LDVANI Trigger: TATATTCGCTACATCCAGCAAGGTCTGGTTCGGCAG...CTTCTGGGTTCTGGGCCCAGCCATATGCAGGACCACAAAGCCACCAGGAAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGGCTCAGAGCTGTTTCGGGGTCCAGCTTaGGTGGGGCTCAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLQPGCLSVLSASGSELFRGPA*VGLSSC Trigger: ACAGCTGCTGAGCCCCACCAAAGCTGGACCCCGAAA...CAGCTCTGAGCCAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTATTTCGGGGTCCAGCTTaGGTGGGGCTCAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ISPPCSDWRHLPYHWGSLFRGPA*VGLSSC Trigger: ACAGCTGCTGAGCCCCACCAAAGCTGGACCCCGAAA...TAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | TCGCGTTACATTCCATTGGAAGGAAATAGGGGCGTGGTGAAGGATATGTCCAGGGGCAGCCCAGGCTCCTaGCCTTCTTTGTCAGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRYIPLEGNRGVVKDMSRGSPGS*PSLSGV Trigger: TACCCCTGACAAAGAAGGCAAGGAGCCTGGGCTGCC...CCTGGACATATCCTTCACCACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGTCCTTTTGTCTGTCTCAGGACGGATGGGTGGTACGGGCTCAGAACTGTGACTCCCTGTTACTTTaGCTGGGGCCTAGGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLSFCLSQDGWVVRAQNCDSLLL*LGPRFF Trigger: GAAAAACCTAGGCCCCAGCAAAAGTAACAGGGAGTC...ACAGTTCTGAGCCCGTACCACCCATCCGTCCTGAGACAGACAAAAGGACAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGTTATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGTCGCCTGCTTCATGTaGGCTTCCCGAACCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GQLSLHLVQIGDICPTTGVACFM*ASRTIL Trigger: CAAGATGGTTCGGGAAGCCAACATGAAGCAGGCGAC...CCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGCCCAGACTTCCTGGCAACTTCAGGAACAGGGCCTCCTGGAGATGGTCTCAGGGCACATGTGTaGGTGTTGTTACACTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: RKGPDFLATSGTGPPGDGLRAHV*VLLHST Trigger: TGTTGAGTGTAACAACACCAACACATGTGCCCTGAG...ACCATCTCCAGGAGGCCCTGTTCCTGAAGTTGCCAGGAAGTCTGGGCCCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS GCA 90 bp | TGGCTGTCAGCTCCTCAAGCTCCTGCTCCAGCTGTGCACGTACTTTaGAAAGCCGTTCACACTCTTCATCCTTTAGCTTCAGCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLSAPQAPAPAVHVL*KAVHTLHPLASAPS Trigger: AGAAGGAGCTGAAGCTAAAGGATGAAGAGTGTGAACGGCTTTGCAAAGTACGTGCACAGCTGGAGCAGGAGCTTGAGGAGCTGACAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000131407.2 ENSMUST00000137637.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCTCAATGGTGAGTGTGTaGTCCTCCACAGCAGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: TLFRLETFALPLGQSNEASMVSV*SSTAVR Trigger: TCGGACTGCTGTGGAGGACAACACACTCACCATTGA...GGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGTCCTTTTGTCTGTCTCAGGACGGATGGGTGGTACGGGCTCAGAACTGTCTCAGGGCACATGTGTaGGTGTTGTTACACTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: RLSFCLSQDGWVVRAQNCLRAHV*VLLHST Trigger: TGTTGAGTGTAACAACACCAACACATGTGCCCTGAG...ACAGTTCTGAGCCCGTACCACCCATCCGTCCTGAGACAGACAAAAGGACAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTGGGAAGAAGCCAAGCTaGGCTAGTGACATGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSDWRHLPYHWGSLMRPLGKKPS*ASDMPF Trigger: GAAGGGCATGTCACTAGCCAAGCTTGGCTTCTTCCC...AAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | CGGGCTCAGAACTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGGGGAAGAAGCCAAGCTaGGCTAGTGACATGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAQNCLYSLVVYLSFQLLGKKPS*ASDMPF Trigger: GAAGGGCATGTCACTAGCCAAGCTTGGCTTCTTCCC...CAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAGCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGTTATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGTGTAGCATGTCGATCTaGCCCCAAGCCTCCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GQLSLHLVQIGDICPTTGCSMSI*PQASFN Trigger: GTTGAAGGAGGCTTGGGGCAAGATCGACATGCTACA...CCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTAATGAGGCCACTTGGAAACAGAGTGAGAAATGGCCACAAGGGGGTGCTGTGTAGCATGTCGATCTaGCCCCAAGCCTCCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLMRPLGNRVRNGHKGVLCSMSI*PQASFN Trigger: GTTGAAGGAGGCTTGGGGCAAGATCGACATGCTACA...CAGCACCCCCTTGTGGCCATTTCTCACTCTGTTTCCAAGTGGCCTCATTAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CAA 90 bp | GGGCAGTTATCTCTCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGACTCCCTGTTACTTTaGCTGGGGCCTAGGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQLSLHLVQIGDICPTTGDSLLL*LGPRFF Trigger: GAAAAACCTAGGCCCCAGCAAAAGTAACAGGGAGTC...CCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAGAGATAACTGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | TCCACCTTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGTCAATGGTGAGTGTGTaGTCCTCCACAGCAGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: STLFRLETFALPLGQSNESMVSV*SSTAVR Trigger: TCGGACTGCTGTGGAGGACAACACACTCACCATTGA...CTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CAA 90 bp | TCGCGTTACATTCCATTGGAAGGAAATAGGGGCGTGGTGAAGGATATGTCCAGGGTCGTATCCACCTCCTaGCCTTCTTTGTCAGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRYIPLEGNRGVVKDMSRVVSTS*PSLSGV Trigger: TACCCCTGACAAAGAAGGCAAGGAGGTGGATACGAC...CCTGGACATATCCTTCACCACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000149967.9 |
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| CDS-3UTR CAA 90 bp | TTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTGTCGTATCCACCTCCTaGCCTTCTTTGTCAGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LFRLETFALPLGQSNEATVVSTS*PSLSGV Trigger: TACCCCTGACAAAGAAGGCAAGGAGGTGGATACGAC...AGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTTGCACATGTGTTGGTGTaGTTACACTCAACAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSDWRHLPYHWGSLMRPLAHVLV*LHSTVG Trigger: GCCCACTGTTGAGTGTAACAACACCAACACATGTGC...AAGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTCAGATTGGAGACATTTGCCCTACCACTGGGGCAGTCTAATGAGGCCACTCTGCCGAACCAGACCTaGCTGGATGTAGCGAATATA | + |
|
Preference number: 5 (lower is better) Translates to: LFRLETFALPLGQSNEATLPNQT*LDVANI Trigger: TATATTCGCTACATCCAGCAAGGTCTGGTTCGGCAG...AGTGGCCTCATTAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS-3UTR CAA 90 bp | GCTGCTTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAAGGGGAAGAAGCCAAGCTaGGCTAGTGACATGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AASIYSKSLEESDSRRQKGKKPS*ASDMPF Trigger: GAAGGGCATGTCACTAGCCAAGCTTGGCTTCTTCCC...CTTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGAACTGTCTCTACAGCCTGGTTGTTTATCTGTCCTTTCAGCTTCTGGCTCGTCGTATCCACCTCCTaGCCTTCTTTGTCAGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRTVSTAWLFICPFSFWLVVSTS*PSLSGV Trigger: TACCCCTGACAAAGAAGGCAAGGAGGTGGATACGAC...GAGCCAGAAGCTGAAAGGACAGATAAACAACCAGGCTGTAGAGACAGTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 |
||
| CDS-3UTR CAA 90 bp | TCGCGTTACATTCCATTGGAAGGAAATAGGGGCGTGGTGAAGGATATGTCCAGGCTCAGGGCACATGTGTaGGTGTTGTTACACTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SRYIPLEGNRGVVKDMSRLRAHV*VLLHST Trigger: TGTTGAGTGTAACAACACCAACACATGTGCCCTGAG...CCTGGACATATCCTTCACCACGCCCCTATTTCCTTCCAATGGAATGTAACGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | ATATCTCAGGTGCTGCACCAAGATGGTAAAGTGAGACATCTCAGGGTCCTGCACCTCAGGGCACATGTGTaGGTGTTGTTACACTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: ISQVLHQDGKVRHLRVLHLRAHV*VLLHST Trigger: TGTTGAGTGTAACAACACCAACACATGTGCCCTGAG...GTGCAGGACCCTGAGATGTCTCACTTTACCATCTTGGTGCAGCACCTGAGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAAGGACTCCCTGTTACTTTaGCTGGGGCCTAGGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AASIYSKSLEESDSRRQKDSLLL*LGPRFF Trigger: GAAAAACCTAGGCCCCAGCAAAAGTAACAGGGAGTC...CTTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAAGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
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| CDS-3UTR CAA 90 bp | TTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAAGGTGGATCAATGGTGAGTGTGTaGTCCTCCACAGCAGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FHLQQISRGIRFTEAEGGSMVSV*SSTAVR Trigger: TCGGACTGCTGTGGAGGACAACACACTCACCATTGA...TCCACCTTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
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| CDS-3UTR CAA 90 bp | TTCCATTTACAGCAAATCTCTAGAGGAATCAGATTCACGGAGGCAGAAGGTGGAGCACATGTGTTGGTGTaGTTACACTCAACAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FHLQQISRGIRFTEAEGGAHVLV*LHSTVG Trigger: GCCCACTGTTGAGTGTAACAACACCAACACATGTGC...TCCACCTTCTGCCTCCGTGAATCTGATTCCTCTAGAGATTTGCTGTAAATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
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| CDS-3UTR CAA 90 bp | GGACTCTATGCAGGGTCTCCAAGAGATATTTGCATATACATTAACAGGTACCAGCTCAGGGCACATGTGTaGGTGTTGTTACACTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GLYAGSPRDICIYINRYQLRAHV*VLLHST Trigger: TGTTGAGTGTAACAACACCAACACATGTGCCCTGAG...CTGGTACCTGTTAATGTATATGCAAATATCTCTTGGAGACCCTGCATAGAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
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| CDS-3UTR CAA 90 bp | TTTGCAAGATGCAAAATGTTTGTAGCTTGGTTTCATGGCAGTATGAATGTGCCTCTGCCGAACCAGACCTaGCTGGATGTAGCGAATATA | + |
|
Preference number: 5 (lower is better) Translates to: FARCKMFVAWFHGSMNVPLPNQT*LDVANI Trigger: TATATTCGCTACATCCAGCAAGGTCTGGTTCGGCAG...AGGCACATTCATACTGCCATGAAACCAAGCTACAAACATTTTGCATCTTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113161.10 ENSMUST00000238672.2 |
||
| CDS-3UTR CAA 90 bp | TGGATAAACACAGTGGGCTGTTACACATACATCAGAATATTACCAAGTCTTAAAGGGAAGAAGCCAAGCTaGGCTAGTGACATGCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WINTVGCYTYIRILPSLKGKKPS*ASDMPF Trigger: GAAGGGCATGTCACTAGCCAAGCTTGGCTTCTTCCC...TTTAAGACTTGGTAATATTCTGATGTATGTGTAACAGCCCACTGTGTTTATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113161.10 ENSMUST00000144788.8 ENSMUST00000238672.2 |
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| CDS CCA 72 bp | ACATCCAGTGGAGCAGGTGCCGGGTGTTCCTCACCCTaGGCCTCCTCCCAGGAAGTGGAGGCTTCTACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSGAGAGCSSP*ASSQEVEASTR Trigger: CCTGGTAGAAGCCTCCACTTCCTGGGAGGAGGCCCAGGGTGAGGAACACCCGGCACCTGCTCCACTGGATGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS CAA 90 bp | AGCGTCGTATCCACCTGTCGGGAAAAGGAGAGAGAGGTATCGGAGTaGGGGGTCGTGGGCGGCTCCCTAGATAGGAGCTGCCAGGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SVVSTCREKEREVSE*GVVGGSLDRSCQVG Trigger: GCCGACCTGGCAGCTCCTATCTAGGGAGCCGCCCACGACCCCCAACTCCGATACCTCTCTCTCCTTTTCCCGACAGGTGGATACGACGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238672.2 |
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| CDS GCA 72 bp | ACTCGGAGCCCTTCTCTCGGATCTCCATGGAGGAACTaGGCAGGCGTGACACATCCAGTGGAGCAGGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TRSPSLGSPWRN*AGVTHPVEQVP Trigger: CGGCACCTGCTCCACTGGATGTGTCACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGAAGGGCTCCGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS CCA 72 bp | CACCTGATGGAGCATAGCGGACAGTGCCTGAGCTCATaGCCAAGAACACTGGGCATGACCCTCGGGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HLMEHSGQCLSS*PRTLGMTLGQG Trigger: GCCCTGCCCGAGGGTCATGCCCAGTGTTCTTGGCCATGAGCTCAGGCACTGTCCGCTATGCTCCATCAGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS CAA 72 bp | TGGGATAGCAGAGAGGCCCACAGGGAGGCCCTCGTCTaGTTGGGGTTGGCTGTGTGCATCCCAGGTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WDSREAHREALV*LGLAVCIPGLL Trigger: GAGGAGACCTGGGATGCACACAGCCAACCCCAACAAGACGAGGGCCTCCCTGTGGGCCTCTCTGCTATCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS TCA 72 bp | CTTCTCTCGGATCTCCATGGAGGAACTGCGCAGGCGTaGCACATCCAGTGGAGCAGGTGCCGGGTGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSDLHGGTAQA*HIQWSRCRVFL Trigger: GAGGAACACCCGGCACCTGCTCCACTGGATGTGTCACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS GCA 72 bp | CCAGGCTCCTTGCCTTCTTTGTCAGGGGTAGGGATATaGCCTGCAGTGGGGCACACAACAGGGCAGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGSLPSLSGVGI*PAVGHTTGQRE Trigger: CTCCCTCTGCCCTGTTGTGTGCCCCACTGCAGGGCATATCCCTACCCCTGACAAAGAAGGCAAGGAGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238672.2 |
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| CDS CAA 72 bp | GATAGCAGAGAGGCCCACAGGGAGGCCCTCGTCTTGTaGGGGTTGGCTGTGTGCATCCCAGGTCTCCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSREAHREALVL*GLAVCIPGLLS Trigger: AGAGAGGAGACCTGGGATGCACACAGCCAACCCCAACAAGACGAGGGCCTCCCTGTGGGCCTCTCTGCTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS CAA 72 bp | TCCACCTGTCGGGAAAAGGAGAGAGAGGTATCGGAGTaGGGGGTCGTGGGCGGCTCCCTAGATAGGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: STCREKEREVSE*GVVGGSLDRSC Trigger: GCAGCTCCTATCTAGGGAGCCGCCCACGACCCCCAACTCCGATACCTCTCTCTCCTTTTCCCGACAGGTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238672.2 |
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| CDS CAA 90 bp | GGGGACTGGGATAGCAGAGAGGCCCACAGGGAGGCCCTCGTCTTGTaGGGGTTGGCTGTGTGCATCCCAGGTCTCCTCTCTAAAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GDWDSREAHREALVL*GLAVCIPGLLSKVP Trigger: AGGAACTTTAGAGAGGAGACCTGGGATGCACACAGCCAACCCCAACAAGACGAGGGCCTCCCTGTGGGCCTCTCTGCTATCCCAGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS CAA 90 bp | CCAGGGGACTGGGATAGCAGAGAGGCCCACAGGGAGGCCCTCGTCTaGTTGGGGTTGGCTGTGTGCATCCCAGGTCTCCTCTCTAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PGDWDSREAHREALV*LGLAVCIPGLLSKV Trigger: AACTTTAGAGAGGAGACCTGGGATGCACACAGCCAACCCCAACAAGACGAGGGCCTCCCTGTGGGCCTCTCTGCTATCCCAGTCCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS GCA 72 bp | AGAGTCCCCCAGGCGGATTCGATGGTGGCAGGTACGTaGCAGGCCACTCAGGGCACATGTGTTGGTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RVPQADSMVAGT*QATQGTCVGVV Trigger: AACAACACCAACACATGTGCCCTGAGTGGCCTGGCACGTACCTGCCACCATCGAATCCGCCTGGGGGACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS GCA 72 bp | CTCCTTGCCTTCTTTGTCAGGGGTAGGGATATGCCCTaGAGTGGGGCACACAACAGGGCAGAGGGAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLAFFVRGRDMP*SGAHNRAEGAA Trigger: AGCAGCTCCCTCTGCCCTGTTGTGTGCCCCACTGCAGGGCATATCCCTACCCCTGACAAAGAAGGCAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS CCA 72 bp | GAGAGGCCCACAGGGAGGCCCTCGTCTTGTTGGGGTTaGCTGTGTGCATCCCAGGTCTCCTCTCTAAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ERPTGRPSSCWG*LCASQVSSLKF Trigger: GAACTTTAGAGAGGAGACCTGGGATGCACACAGCCAACCCCAACAAGACGAGGGCCTCCCTGTGGGCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS CCA 72 bp | ATAGCAGAGAGGCCCACAGGGAGGCCCTCGTCTTGTTaGGGTTGGCTGTGTGCATCCCAGGTCTCCTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: IAERPTGRPSSC*GWLCASQVSSL Trigger: TAGAGAGGAGACCTGGGATGCACACAGCCAACCCCAACAAGACGAGGGCCTCCCTGTGGGCCTCTCTGCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS CAA 90 bp | TGGGATAGCAGAGAGGCCCACAGGGAGGCCCTCGTCTTGTTGGGGTaGGCTGTGTGCATCCCAGGTCTCCTCTCTAAAGTTCCTCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WDSREAHREALVLLG*AVCIPGLLSKVPLR Trigger: CCTGAGAGGAACTTTAGAGAGGAGACCTGGGATGCACACAGCCAACCCCAACAAGACGAGGGCCTCCCTGTGGGCCTCTCTGCTATCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS CAA 90 bp | TGGTGGCAGGTACGTGCCAGGCCACTCAGGGCACATGTGTTGGTGTaGTTACACTCAACAGTGGGCACCTTCACAGCGGGCAGTGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WWQVRARPLRAHVLV*LHSTVGTFTAGSVC Trigger: ACAGACACTGCCCGCTGTGAAGGTGCCCACTGTTGAGTGTAACAACACCAACACATGTGCCCTGAGTGGCCTGGCACGTACCTGCCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS GCA 72 bp | GTACAGGACCCACACCTGATGGAGCATAGCGGACAGTaGCTGAGCTCATGGCCAAGAACACTGGGCATGACC | + |
|
Preference number: 6 (lower is better) Translates to: VQDPHLMEHSGQ*LSSWPRTLGMT Trigger: GGTCATGCCCAGTGTTCTTGGCCATGAGCTCAGGCACTGTCCGCTATGCTCCATCAGGTGTGGGTCCTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149967.9 |
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| CDS CCA 72 bp | CCTTTAGGAACTCGGAGCCCTTCTCTCGGATCTCCATaGAGGAACTGCGCAGGCGTGACACATCCAGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLGTRSPSLGSP*RNCAGVTHPVE Trigger: CTCCACTGGATGTGTCACGCCTGCGCAGTTCCTCCATGGAGATCCGAGAGAAGGGCTCCGAGTTCCTAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS CAA 72 bp | GTACGTGCCAGGCCACTCAGGGCACATGTGTTGGTGTaGTTACACTCAACAGTGGGCACCTTCACAGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VRARPLRAHVLV*LHSTVGTFTAG Trigger: GCCCGCTGTGAAGGTGCCCACTGTTGAGTGTAACAACACCAACACATGTGCCCTGAGTGGCCTGGCACGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS CAA 90 bp | ATTCGATGGTGGCAGGTACGTGCCAGGCCACTCAGGGCACATGTGTaGGTGTTGTTACACTCAACAGTGGGCACCTTCACAGCGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: IRWWQVRARPLRAHV*VLLHSTVGTFTAGS Trigger: ACTGCCCGCTGTGAAGGTGCCCACTGTTGAGTGTAACAACACCAACACATGTGCCCTGAGTGGCCTGGCACGTACCTGCCACCATCGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS CCA 72 bp | GGCAGGTACGTGCCAGGCCACTCAGGGCACATGTGTTaGTGTTGTTACACTCAACAGTGGGCACCTTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: GRYVPGHSGHMC*CCYTQQWAPSQ Trigger: CTGTGAAGGTGCCCACTGTTGAGTGTAACAACACCAACACATGTGCCCTGAGTGGCCTGGCACGTACCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
||
| CDS CAA 72 bp | TCTGCAAACAGCGTCGTATCCACCTCCTTGCCTTCTTaGTCAGGGGTAGGGATATGCCCTGCAGTGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SANSVVSTSLPS*SGVGICPAVGH Trigger: GTGCCCCACTGCAGGGCATATCCCTACCCCTGACAAAGAAGGCAAGGAGGTGGATACGACGCTGTTTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 |
||
| CDS TCA 72 bp | CAAGCTTGGCTAGTGACATGCCCTTCCGAAGCCTCATaGTCTCCCAGAACATCGGCTCAGCATCCTGCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: QAWLVTCPSEAS*SPRTSAQHPAE Trigger: TTCGGCAGGATGCTGAGCCGATGTTCTGGGAGATCATGAGGCTTCGGAAGGGCATGTCACTAGCCAAGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS GCA 72 bp | GCTGGCTGTCAGCTCCTCAAGCTCCTGCTCCAGCTGTaGACGTACTTTGCAAAGCCGTTCACACTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: AGCQLLKLLLQL*TYFAKPFTLFI Trigger: GATGAAGAGTGTGAACGGCTTTGCAAAGTACGTGCACAGCTGGAGCAGGAGCTTGAGGAGCTGACAGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000131407.2 ENSMUST00000137637.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS GCA 72 bp | AGCGTCGTATCCACCTTGCCCCAAGCCTCCTTCAACTaGTTTTCCGATGTCGCCTGCTTCATGTTGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVVSTLPQASFN*FSDVACFMLAS Trigger: GGAAGCCAACATGAAGCAGGCGACATCGGAAAAGCAGTTGAAGGAGGCTTGGGGCAAGGTGGATACGACGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117641.8 |
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| CDS CCA 72 bp | CAGCTCTTATCCAGGGTAGGTGAAGCTCTCCAAGCTTaGAACTCTGCAAACAGCGTCGTATCCACCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: QLLSRVGEALQA*NSANSVVSTLP Trigger: GGGCAAGGTGGATACGACGCTGTTTGCAGAGTTCCAAGCTTGGAGAGCTTCACCTACCCTGGATAAGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117641.8 |
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| CDS CCA 72 bp | CAGCTCTTATCCAGGGTAGGTGAAGCTCTCCAAGCTTaGAACTCTGCAAACAGCGTCGTATCCACCTGTCGG | + |
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Preference number: 6 (lower is better) Translates to: QLLSRVGEALQA*NSANSVVSTCR Trigger: CCGACAGGTGGATACGACGCTGTTTGCAGAGTTCCAAGCTTGGAGAGCTTCACCTACCCTGGATAAGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238672.2 |
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| CDS CAA 90 bp | CTGGCTGTCAGCTCCTCAAGCTCCTGCTCCAGCTGTGCACGTACTTaGCAAAGCCGTTCACACTCTTCATCCTTTAGCTTCAGCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LAVSSSSSCSSCART*QSRSHSSSFSFSSF Trigger: GAAGGAGCTGAAGCTAAAGGATGAAGAGTGTGAACGGCTTTGCAAAGTACGTGCACAGCTGGAGCAGGAGCTTGAGGAGCTGACAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000131407.2 ENSMUST00000137637.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS GCA 72 bp | TGTAGCATGTCGATCTTGCCCCAAGCCTCCTTCAACTaGTTTTCCGATGTCGCCTGCTTCATGTTGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: CSMSILPQASFN*FSDVACFMLAS Trigger: GGAAGCCAACATGAAGCAGGCGACATCGGAAAAGCAGTTGAAGGAGGCTTGGGGCAAGATCGACATGCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000121418.8 ENSMUST00000131407.2 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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| CDS CAA 72 bp | CCAGAACATCGGCTCAGCATCCTGCCGAACCAGACCTaGCTGGATGTAGCGAATATAGGTGAAGAAGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: PEHRLSILPNQT*LDVANIGEEVA Trigger: TGCAACTTCTTCACCTATATTCGCTACATCCAGCAAGGTCTGGTTCGGCAGGATGCTGAGCCGATGTTCTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000113161.10 ENSMUST00000117641.8 ENSMUST00000121418.8 ENSMUST00000144788.8 ENSMUST00000149967.9 ENSMUST00000238672.2 |
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