Pregenerated sensors for RAB3GAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036104Ensembl transcript IDs: ENSMUST00000037649.6, ENSMUST00000212506.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTGACTCCTaGTGCTGGTTCCACAAGGGCGTCTCAGGTGCCCACGGCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LKLGTGHASGCWCDS*CWFHKGVSGAHGRS Trigger: GCTCCTGCCGTGGGCACCTGAGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR TCA 90 bp | CATCTGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTaGCTCCTGCTGCTGGTTCCACAAGGGCGTCTCAGGTGCCCACGG | + |
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Preference number: 1 (lower is better) Translates to: HLAQAWYWTCFWMLV*LLLLVPQGRLRCPR Trigger: CCGTGGGCACCTGAGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR GCA 90 bp | TTCAGCCCACTCACAGCCTCGGCACACACACCACAGCTCACTAACTaGATGGTGATCTATGTTCCCAGGATGTGTGTTCAACATGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: FSPLTASAHTPQLTN*MVIYVPRMCVQHVL Trigger: GAGCACATGTTGAACACACATCCTGGGAACATAGATCACCATGCAGTTAGTGAGCTGTGGTGTGTGTGCCGAGGCTGTGAGTGGGCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR TCA 90 bp | GCATATGGAATACTAGTAAGGATAGCTACTAAGTGTCTACACAGATaGCTGTCACAGGAGAATGAACAAACTCTGTCCCCCAAGGTAAGA | + |
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Preference number: 1 (lower is better) Translates to: AYGILVRIATKCLHR*LSQENEQTLSPKVR Trigger: TCTTACCTTGGGGGACAGAGTTTGTTCATTCTCCTGTGACAGTCATCTGTGTAGACACTTAGTAGCTATCCTTACTAGTATTCCATATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR GCA 90 bp | CAGACAGACAGACACACAGACAGACACACAGAGAGAGCTCTAATCTaGAGCTACATTTCATGTACAGATTTATCAGAAGAAATGCATTTG | + |
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Preference number: 1 (lower is better) Translates to: QTDRHTDRHTERALI*SYISCTDLSEEMHL Trigger: CAAATGCATTTCTTCTGATAAATCTGTACATGAAATGTAGCTGCAGATTAGAGCTCTCTCTGTGTGTCTGTCTGTGTGTCTGTCTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR TCA 90 bp | ATGCTCATGAAACAGCATAATAAAGCTGACCATCCATCTGGTGACTaGATAAACAGAATGCTACGTGGCAGTTTAAAAACACAGATCCTG | + |
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Preference number: 1 (lower is better) Translates to: MLMKQHNKADHPSGD*INRMLRGSLKTQIL Trigger: CAGGATCTGTGTTTTTAAACTGCCACGTAGCATTCTGTTTATTCAGTCACCAGATGGATGGTCAGCTTTATTATGCTGTTTCATGAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR TCA 90 bp | AGGACAGAGCCATCACCCCTGCACCGGGTGCTTCAGCCCACTCACAGCCTCGGCAGAGGCCTGCTGATGTaGGGTTCCCCTAACACAGGC | + |
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Preference number: 2 (lower is better) Translates to: RTEPSPLHRVLQPTHSLGRGLLM*GSPNTG Trigger: GCCTGTGTTAGGGGAACCTCACATCAGCAGGCCTCT...GCCGAGGCTGTGAGTGGGCTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR TCA 90 bp | CATCACCCCTGCACCGGGTGCTTCAGCCCACTCACAGCCTCGGCACACACACCACATCCATCTGGTGACTaGATAAACAGAATGCTACGT | + |
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Preference number: 2 (lower is better) Translates to: HHPCTGCFSPLTASAHTPHPSGD*INRMLR Trigger: ACGTAGCATTCTGTTTATTCAGTCACCAGATGGATG...TGGTGTGTGTGCCGAGGCTGTGAGTGGGCTGAAGCACCCGGTGCAGGGGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGAGTGCAAAGCAGGGGTaGAACCAAGAGGACCGAGAG | + |
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Preference number: 2 (lower is better) Translates to: KANTVLSCICSGPSCLSPSAKQG*NQEDRE Trigger: CTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACT...CGGGCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCGTACTGATGCATTCTaGGCTGCAGAGGACAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: TQESKHCPVLYLFWPLMPRTDAF*AAEDRA Trigger: GGCTCTGTCCTCTGCAGCTCAGAATGCATCAGTACG...AGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR GCA 90 bp | CCAACCCCACACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCTTTCAGAGGAAAGAGTaGTCGCTGGGAAGTCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: PTPHCRVLSSIPRKANTVFQRKE*SLGSLG Trigger: CCCTAGACTTCCCAGCGAGCACTCTTTCCTCTGAAA...GACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGTGTGGGGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTAGGGAAGTCTAGGGGTTaGCCCCTGGCCCTCATATAC | + |
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Preference number: 2 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVGKSRG*PLALIY Trigger: GTATATGAGGGCCAGGGGCCAACCCCTAGACTTCCC...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR GCA 90 bp | AAACAATGCCATTTTAGACCAACCCCACACTGTAGAGTTCTGTCATCAATACCCCGCAGAGAAGTAAAGTaGAAAGCAGGGGTGCAACCA | + |
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Preference number: 2 (lower is better) Translates to: KQCHFRPTPHCRVLSSIPRREVK*KAGVQP Trigger: TGGTTGCACCCCTGCTTTGCACTTTACTTCTCTGCG...GGGTATTGATGACAGAACTCTACAGTGTGGGGTTGGTCTAAAATGGCATTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR CCA 90 bp | AAACAATGCCATTTTAGACCAACCCCACACTGTAGAGTTCTGTCATCAATACCCGCTCAAGCTTGGTACTaGACATGCTTCTGGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: KQCHFRPTPHCRVLSSIPAQAWY*TCFWML Trigger: CAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGC...GGGTATTGATGACAGAACTCTACAGTGTGGGGTTGGTCTAAAATGGCATTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAACTCTACCTTGCATATaGAATACTAGTAAGGATAGC | + |
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Preference number: 2 (lower is better) Translates to: SKVQSRGATKRTERSYQTTLPCI*NTSKDS Trigger: GCTATCCTTACTAGTATTCCATATGCAAGGTAGAGT...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR GCA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTAGAGAGAGCTCTAATCTaGAGCTACATTTCATGTACA | + |
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Preference number: 2 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVERALI*SYISCT Trigger: TGTACATGAAATGTAGCTGCAGATTAGAGCTCTCTC...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTGGGAATTTTAGGTCCCAAAATAATTTACAATCACCAAGGAGAGGTCCCAAACAGAATGCTACGTaGCAGTTTAAAAACACAGAT | + |
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Preference number: 2 (lower is better) Translates to: SSGNFRSQNNLQSPRRGPKQNAT*QFKNTD Trigger: ATCTGTGTTTTTAAACTGCCACGTAGCATTCTGTTT...GGGACCTCTCCTTGGTGATTGTAAATTATTTTGGGACCTAAAATTCCCACTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR GCA 72 bp | AGCTGCAGAGGACAGAGCCATCACCCCTGCACCGGGTaGTTCAGCCCACTCACAGCCTCGGCACACACACCA | + |
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Preference number: 3 (lower is better) Translates to: SCRGQSHHPCTG*FSPLTASAHTP Trigger: TGGTGTGTGTGCCGAGGCTGTGAGTGGGCTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCTCTGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR GCA 72 bp | TGCATTCTGAGCTGCAGAGGACAGAGCCATCACCCCTaGACCGGGTGCTTCAGCCCACTCACAGCCTCGGCA | + |
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Preference number: 3 (lower is better) Translates to: CILSCRGQSHHP*TGCFSPLTASA Trigger: TGCCGAGGCTGTGAGTGGGCTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCTCTGCAGCTCAGAATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR CCA 72 bp | GGACATGCTTCTGGATGCTGGTGTGACTCCTGCTGCTaGTTCCACAAGGGCGTCTCAGGTGCCCACGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GHASGCWCDSCC*FHKGVSGAHGR Trigger: CCTGCCGTGGGCACCTGAGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAGCATGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR TCA 72 bp | CAAGGAGAGGTCCCGCAGCAGCGTACTGATGCATTCTaGGCTGCAGAGGACAGAGCCATCACCCCTGCACCG | + |
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Preference number: 3 (lower is better) Translates to: QGEVPQQRTDAF*AAEDRAITPAP Trigger: CGGTGCAGGGGTGATGGCTCTGTCCTCTGCAGCTCAGAATGCATCAGTACGCTGCTGCGGGACCTCTCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR CAA 90 bp | ATGCATTCTGAGCTGCAGAGGACAGAGCCATCACCCCTGCACCGGGTGCTTCAGCCATCTGGCTCAAGCTaGGTACTGGACATGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: MHSELQRTEPSPLHRVLQPSGSS*VLDMLL Trigger: CAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGG...CTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCTCTGCAGCTCAGAATGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR CCA 72 bp | TGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTaGTGTGACTCCTGCTGCTGGTTCCACAAGGGCGTC | + |
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Preference number: 3 (lower is better) Translates to: WLKLGTGHASGC*CDSCCWFHKGV Trigger: GACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR GCA 72 bp | TCTAAGAAGCAAAGTCCAGCATTTCAGAGGAAAGAGTaGTCGCTGGGAAGTCTAGGGGTTGGCCCCTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: SKKQSPAFQRKE*SLGSLGVGPWP Trigger: GGGCCAGGGGCCAACCCCTAGACTTCCCAGCGAGCACTCTTTCCTCTGAAATGCTGGACTTTGCTTCTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR GCA 72 bp | CTCACAGCCTCGGCACACACACCACAGCTCACTAACTaGATGGTGATCTATGTTCCCAGGATGTGTGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: LTASAHTPQLTN*MVIYVPRMCVQ Trigger: TTGAACACACATCCTGGGAACATAGATCACCATGCAGTTAGTGAGCTGTGGTGTGTGTGCCGAGGCTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR GCA 72 bp | AATACCATCCCTAACCAGCAACGCAGAGAAGTAAAGTaGAAAGCAGGGGTGCAACCAAGAGGACCGAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: NTIPNQQRREVK*KAGVQPRGPRD Trigger: ATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACTTCTCTGCGTTGCTGGTTAGGGATGGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR CCA 72 bp | ATTTGTTCTGGCCCCTCATGCCTCAGCCCGTATCTATaGGTTTCTAAGAAGCAAAGTCCAGCATTTCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: ICSGPSCLSPYL*VSKKQSPAFQR Trigger: CCTCTGAAATGCTGGACTTTGCTTCTTAGAAACCCATAGATACGGGCTGAGGCATGAGGGGCCAGAACAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR GCA 72 bp | AACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATaGCTCAGCCCGTATCTATGGGTTTCTAAGAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: NTVLSCICSGPS*LSPYLWVSKKQ Trigger: TTGCTTCTTAGAAACCCATAGATACGGGCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGTCAGAAGAAATGCATTaGGTTAGTGGCATGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: KANTVLSCICSGPSCLSPSEEMH*VSGMEK Trigger: TTTTTCCATGCCACTAACCAAATGCATTTCTTCTGA...CGGGCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR TCA 72 bp | ATACTAGTAAGGATAGCTACTAAGTGTCTACACAGATaGCTGTCACAGGAGAATGAACAAACTCTGTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: ILVRIATKCLHR*LSQENEQTLSP Trigger: GGGGGACAGAGTTTGTTCATTCTCCTGTGACAGTCATCTGTGTAGACACTTAGTAGCTATCCTTACTAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR GCA 72 bp | AGACACACAGACAGACACACAGAGAGAGCTCTAATCTaGAGCTACATTTCATGTACAGATTTATCAGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: RHTDRHTERALI*SYISCTDLSEE Trigger: TTCTTCTGATAAATCTGTACATGAAATGTAGCTGCAGATTAGAGCTCTCTCTGTGTGTCTGTCTGTGTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| 3UTR TCA 72 bp | AAACAGCATAATAAAGCTGACCATCCATCTGGTGACTaGATAAACAGAATGCTACGTGGCAGTTTAAAAACA | + |
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Preference number: 3 (lower is better) Translates to: KQHNKADHPSGD*INRMLRGSLKT Trigger: TGTTTTTAAACTGCCACGTAGCATTCTGTTTATTCAGTCACCAGATGGATGGTCAGCTTTATTATGCTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR GCA 90 bp | GACATGCTTCTGGATGCTGGTGTGACTCCTGCTGCTGGTTCCACAAGGGCGTCTGGCACTCTGCATGCGTaGGCGGAGGTGCGCCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: DMLLDAGVTPAAGSTRASGTLHA*AEVRPL Trigger: GAGGGGGCGCACCTCCGCGCACGCATGCAGAGTGCC...AGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAGCATGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR GCA 90 bp | CTTCTGGATGCTGGTGTGACTCCTGCTGCTGGTTCCACAAGGGCGTCTCAGGTGGACAGGCACTCTGCATaGGTGCGCGGAGGTGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: LLDAGVTPAAGSTRASQVDRHSA*VRGGAP Trigger: GGGCGCACCTCCGCGCACGCATGCAGAGTGCCTGTC...CACCTGAGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR GCA 90 bp | ATGCATTCTGAGCTGCAGAGGACAGAGCCATCACCCCTGCACCGGGTGCTTCAGTTCCTGCCAGAGATGTaGCACTCCCTTCAGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: MHSELQRTEPSPLHRVLQFLPEM*HSLQPS Trigger: GGAGGGCTGAAGGGAGTGGCACATCTCTGGCAGGAA...CTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCTCTGCAGCTCAGAATGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CCA 90 bp | CCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCCAGGCCGCGGCACAGTaGCCCTCAGGATCAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PRKANTVLSCICSGPSCLQAAAQ*PSGSAP Trigger: GGGAGCTGATCCTGAGGGCCACTGTGCCGCGGCCTG...GAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR GCA 90 bp | CCATCTGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTGACTCCTCTCTGGCAGAGCCACTaGCGCAGCCCGCTGAGCATT | + |
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Preference number: 4 (lower is better) Translates to: PSGSSLVLDMLLDAGVTPLWQSH*RSPLSI Trigger: AATGCTCAGCGGGCTGCGGCAGTGGCTCTGCCAGAG...AGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR GCA 90 bp | AAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGAGGAGACAGGCACTCTaGATGCGTGCGCGGAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KANTVLSCICSGPSCLSPRRQAL*MRARRC Trigger: GCACCTCCGCGCACGCATGCAGAGTGCCTGTCTCCT...CGGGCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR TCA 90 bp | CATCACCCCTGCACCGGGTGCTTCAGCCCACTCACAGCCTCGGCACACACACCAGAAACTGATAATTTATaGATTGGAACTGGCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HHPCTGCFSPLTASAHTPETDNL*IGTGAG Trigger: GCCAGCGCCAGTTCCAATTCATAAATTATCAGTTTC...TGGTGTGTGTGCCGAGGCTGTGAGTGGGCTGAAGCACCCGGTGCAGGGGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR GCA 90 bp | CCAACCCCACACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCATGCGTGCGCGGAGGTaGGCCCCCTCAGCAGATGTC | + |
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Preference number: 4 (lower is better) Translates to: PTPHCRVLSSIPRKANTVMRARR*APSADV Trigger: GACATCTGCTGAGGGGGCGCACCTCCGCGCACGCAT...GACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGTGTGGGGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CCA 90 bp | CCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCTGGTCCAGGCCCAGCTaGCCTCCAGTTTTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PRKANTVLSCICSGPSCLWSRPS*PPVFPA Trigger: TGCTGGGAAAACTGGAGGCCAGCTGGGCCTGGACCA...GAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR TCA 90 bp | ATGCATTCTGAGCTGCAGAGGACAGAGCCATCACCCCTGCACCGGGTGCTTCAGGACCAATGGGGAGCTTaGACAGGATCCAAATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: MHSELQRTEPSPLHRVLQDQWGA*TGSKSE Trigger: TTCTGATTTGGATCCTGTTCAAGCTCCCCATTGGTC...CTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCTCTGCAGCTCAGAATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR TCA 90 bp | CTTCTGGATGCTGGTGTGACTCCTGCTGCTGGTTCCACAAGGGCGTCTCAGGTGCGGAAGGCGCAGACTTaGACTGATTGTAGAGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: LLDAGVTPAAGSTRASQVRKAQT*TDCREY Trigger: ATACTCTCTACAATCAGTTCAAGTCTGCGCCTTCCG...CACCTGAGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR TCA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAACTGCCGCAGCCCGCTaGGCATTCACAAACAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SKVQSRGATKRTERSYQTTAAAR*AFTNSL Trigger: CAAGCTGTTTGTGAATGCTCAGCGGGCTGCGGCAGT...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR GCA 90 bp | AGGACAGAGCCATCACCCCTGCACCGGGTGCTTCAGCCCACTCACAGCCTCGGCATACATAGCAAATCTTaGATTGACTGTGGAATAGCG | + |
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Preference number: 4 (lower is better) Translates to: RTEPSPLHRVLQPTHSLGIHSKS*IDCGIA Trigger: CGCTATTCCACAGTCAATGCAAGATTTGCTATGTAT...GCCGAGGCTGTGAGTGGGCTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR GCA 90 bp | AAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAGACCACCAAATGGCAACTTaGCGAACTCCAGGCCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: KVQSRGATKRTERSYQTDHQMAT*RTPGPQ Trigger: TTGGGGGCCTGGAGTTCGGCAAGTTGCCATTTGGTG...GTCTGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR GCA 90 bp | ATGCATTCTGAGCTGCAGAGGACAGAGCCATCACCCCTGCACCGGGTGCTTCAGAGCATCCCCTGGATATaGACTAGTCGTACTATCCGA | + |
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Preference number: 4 (lower is better) Translates to: MHSELQRTEPSPLHRVLQSIPWI*TSRTIR Trigger: TCGGATAGTACGACTAGTGCATATCCAGGGGATGCT...CTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCTCTGCAGCTCAGAATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | CTTCTGGATGCTGGTGTGACTCCTGCTGCTGGTTCCACAAGGGCGTCTCAGGTGACAAACAGTGGTACCTaGCAGCCAGTGTTTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLDAGVTPAAGSTRASQVTNSGT*QPVFPK Trigger: TTTGGGAAACACTGGCTGCCAGGTACCACTGTTTGT...CACCTGAGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | AAGCAAAGTCCAGCATTTCAGAGGAAAGAGTGCTCGCTGGGAAGTCTAGGGGTTGTAAGTTTCCCGTGCTaGTGCAGGCGGCCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQSPAFQRKECSLGSLGVVSFPC*CRRPSG Trigger: GCCAGAAGGCCGCCTGCACCAGCACGGGAAACTTAC...AACCCCTAGACTTCCCAGCGAGCACTCTTTCCTCTGAAATGCTGGACTTTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGCTGCAGGCTTCTGCATaGCCAGGTAGTGCAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KANTVLSCICSGPSCLSPLQASA*PGSAGP Trigger: AGGTCCTGCACTACCTGGCCATGCAGAAGCCTGCAG...CGGGCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGGCTGTACATACGCTGTaGCAGGGCCTTGGAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KANTVLSCICSGPSCLSPAVHTL*QGLGVG Trigger: CCCTACTCCAAGGCCCTGCCACAGCGTATGTACAGC...CGGGCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | CTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGTATCTATGGGTTTCTAAGATCCTGCCCCAGTGACTaGTACCTCAGGCTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVFVLAPHASARIYGFLRSCPSD*YLRLLQ Trigger: CTGGAGCAGCCTGAGGTATCAGTCACTGGGGCAGGA...TCTTAGAAACCCATAGATACGGGCTGAGGCATGAGGGGCCAGAACAAATACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | ATGCATTCTGAGCTGCAGAGGACAGAGCCATCACCCCTGCACCGGGTGCTTCAGGACTCTTCCCCTCTGTaGTTCCGTATCTTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MHSELQRTEPSPLHRVLQDSSPL*FRIFFF Trigger: AAAGAAGAAGATACGGAAGCACAGAGGGGAAGAGTC...CTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCTCTGCAGCTCAGAATGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | CCATCTGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTGACTCCTATCTTCTGTCATGGGTaGTGGTTCCTGGGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGSSLVLDMLLDAGVTPIFCHG*WFLGHW Trigger: CCAGTGACCCAGGAACCAGCACCCATGACAGAAGAT...AGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | AAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAGACTGGTTCCTGGGTCACTaGAATGTAGAGAGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVQSRGATKRTERSYQTDWFLGH*NVERLS Trigger: GGAGAGCCTCTCTACATTCCAGTGACCCAGGAACCA...GTCTGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | CCATCTGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTGACTCCTGCAGATCTTCTGTCATaGGTGCTGGTTCCTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGSSLVLDMLLDAGVTPADLLS*VLVPGS Trigger: TGACCCAGGAACCAGCACCCATGACAGAAGATCTGC...AGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | CTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGTATCTATGGGTTTCTAAGACTTAAGCTCCTCCTCTaGCAGAGCCACTGCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVFVLAPHASARIYGFLRLKLLL*QSHCRS Trigger: GCTGCGGCAGTGGCTCTGCCAGAGGAGGAGCTTAAG...TCTTAGAAACCCATAGATACGGGCTGAGGCATGAGGGGCCAGAACAAATACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | GTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAGGATGTCCAGCAGGCCTaGCAAATGAGTGTACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: VKCKAGVQPRGPRDPTRQDVQQA*QMSVLT Trigger: AGTCAGTACACTCATTTGTCAGGCCTGCTGGACATC...CTGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | CTTCTGGATGCTGGTGTGACTCCTGCTGCTGGTTCCACAAGGGCGTCTCAGGTGCTCCATGGTAGAAGTTaGTCATACAAAGACACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLDAGVTPAAGSTRASQVLHGRS*SYKDTR Trigger: CCTTGTGTCTTTGTATGATCAACTTCTACCATGGAG...CACCTGAGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | AGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCTTCTCTGTATCTCTaGGATGGTCCAGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKANTVLSCICSGPSCLSPSLYL*DGPGPA Trigger: AGCTGGGCCTGGACCATCTCAGAGATACAGAGAAGG...GCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAAACAGCTTGTGGATaGTGCGGCCAGCATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQESKHCPVLYLFWPLMPQTACG*CGQHVL Trigger: GAGGACATGCTGGCCGCATCATCCACAAGCTGTTTG...AGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | CCATCTGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTGACTCCTAACTGCATCACTGTGTaGAGCAGGAGCAATCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSGSSLVLDMLLDAGVTPNCITV*SRSNHH Trigger: GTGGTGATTGCTCCTGCTGCACACAGTGATGCAGTT...AGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | GACATGCTTCTGGATGCTGGTGTGACTCCTGCTGCTGGTTCCACAAGGGCGTCTTTTATGAATTGGAACTaGCGCTGGCTCAGTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DMLLDAGVTPAAGSTRASFMNWN*RWLSQL Trigger: AAGCTGACTGAGCCAGCGCCAGTTCCAATTCATAAA...AGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAGCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACATCTCAGTTCCAAATTTaGCCTTCAGGGACCGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKVQSRGATKRTERSYQTSQFQI*PSGTGL Trigger: GAGCCCGGTCCCTGAAGGCCAAATTTGGAACTGAGA...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACATTGAGAACAGCTGCATaGATCACACAAGGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKVQSRGATKRTERSYQTLRTAA*ITQGRR Trigger: CCTCCTGCCTTGTGTGATTCATGCAGCTGTTCTCAA...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAAGAGGCTCTCCATTATaGAGCAGGGTAAGTTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SKVQSRGATKRTERSYQTRGSPL*SRVSFP Trigger: CGGGAAACTTACCCTGCTGCATAATGGAGAGCCTCT...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | CCATCTGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTGACTCCTTCCTTTTCCTCCTCGTaGTCACACTTCTCAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGSSLVLDMLLDAGVTPSFSSS*SHFSVP Trigger: TGGAACTGAGAAGTGTGAGCACGAGGAGGAAAAGGA...AGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | GACATGCTTCTGGATGCTGGTGTGACTCCTGCTGCTGGTTCCACAAGGGCGTCTCTCAGAGACAGCATCTaGGAACAAGAACAAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DMLLDAGVTPAAGSTRASLRDSI*EQEQEN Trigger: ATTCTCTTGTTCTTGTTCCCAGATGCTGTCTCTGAG...AGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAGCATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | CCAACCCCACACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCAGGTGGTGGGAAGTCTaGCACCAAGGTCTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPHCRVLSSIPRKANTVRWWEV*HQGLSS Trigger: AGAAGACAGACCTTGGTGTCAGACTTCCCACCACCT...GACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGTGTGGGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | CCATCTGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTGACTCCTTCTTACCAGGCAATGTaGTCTTGGAGGAAAGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSGSSLVLDMLLDAGVTPSYQAM*SWRKVV Trigger: AACGACTTTCCTCCAAGAGCACATTGCCTGGTAAGA...AGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | CCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCGCTAAGACCTCAGACTaGTCTTCCAGCAGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRKANTVLSCICSGPSCLAKTSD*SSSRSS Trigger: AGAAGATCTGCTGGAAGAGCAGTCTGAGGTCTTAGC...GAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | CCATCTGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTGACTCCTTACCTTGAGAACAGCTaGATGAATCACACAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSGSSLVLDMLLDAGVTPYLENS*MNHTRQ Trigger: CTGCCTTGTGTGATTCATGCAGCTGTTCTCAAGGTA...AGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | CCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAAGGGCATCTATATCTaGAGGCTGCTGAGGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRKANTVLSCICSGPSCLKGIYI*RLLRPK Trigger: TTTTGGCCTCAGCAGCCTCCAGATATAGATGCCCTT...GAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAATAGTCTCCAGCCTCTaGTGCAGGAATGCTATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKVQSRGATKRTERSYQTIVSSL*CRNAIV Trigger: GACAATAGCATTCCTGCACCAGAGGCTGGAGACTAT...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | ATTTTAGGTCCCAAAATAATTTACAATCACCAAGGAGAGGTCCCGCAGCAGCGTAAGGCAGGAGGTGCCTaGCTAGGTCTGCAGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILGPKIIYNHQGEVPQQRKAGGA*LGLQAS Trigger: AGAAGCCTGCAGACCTAGCCAGGCACCTCCTGCCTT...ACGCTGCTGCGGGACCTCTCCTTGGTGATTGTAAATTATTTTGGGACCTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGTTCACAAACAGCTTGTaGATGATGCGGCCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: KANTVLSCICSGPSCLSPFTNSL*MMRPAC Trigger: ACATGCTGGCCGCATCATCCACAAGCTGTTTGTGAA...CGGGCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| 3UTR CAA 72 bp | GTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTaGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: VINTQESKHCPV*YLFWPLMPQPV Trigger: TACGGGCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | AAGCAAAGTCCAGCATTTCAGAGGAAAGAGTGCTCGCTGGGAAGTCTAGGGGTTCGAACACCAGGACCTTaGCATTCTCCCATGTACATT | + |
|
Preference number: 4 (lower is better) Translates to: KQSPAFQRKECSLGSLGVRTPGP*HSPMYI Trigger: AATGTACATGGGAGAATGTCAAGGTCCTGGTGTTCG...AACCCCTAGACTTCCCAGCGAGCACTCTTTCCTCTGAAATGCTGGACTTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | CCATCTGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTGACTCCTTGGCTCAGTCAGCTTTaGCAAAGCATGAGTTATATC | + |
|
Preference number: 4 (lower is better) Translates to: PSGSSLVLDMLLDAGVTPWLSQL*QSMSYI Trigger: GATATAACTCATGCTTTGTCAAAGCTGACTGAGCCA...AGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | CCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCTCAGGATTGGGGAAATaGAGAACTTTGCTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PRKANTVLSCICSGPSCLSGLGK*RTLLEW Trigger: CCATTCCAGCAAAGTTCTGCATTTCCCCAATCCTGA...GAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| 3UTR CAA 72 bp | TCTCTGACACCTCAAATCTATCCATCTGGCTCAAGCTaGGTACTGGACATGCTTCTGGATGCTGGTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SLTPQIYPSGSS*VLDMLLDAGVT Trigger: AGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGGATAGATTTGAGGTGTCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| 3UTR CAA 72 bp | AATACCCAGGAAAGCAAACACTGTCCTGTCTTGTATTaGTTCTGGCCCCTCATGCCTCAGCCCGTATCTATG | + |
|
Preference number: 4 (lower is better) Translates to: NTQESKHCPVLY*FWPLMPQPVSM Trigger: CATAGATACGGGCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | GTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAGAAGAATTTCATCCGTTaGTTCCTTTCGACGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VKCKAGVQPRGPRDPTRQKNFIR*FLSTAN Trigger: ATTTGCCGTCGAAAGGAATCAACGGATGAAATTCTT...CTGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTACTCCTCTGGGCAGCCTaGTTTCTTAAGCTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVLLWAA*FLKLLL Trigger: GAGGAGGAGCTTAAGAAATCAGGCTGCCCAGAGGAG...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTAGAAAAAGGAGGTGTCTaGGGAAAAGGCACCCGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVEKGGV*GKGTRE Trigger: CTCGCGGGTGCCTTTTCCTCAGACACCTCCTTTTTC...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | AAACAATGCCATTTTAGACCAACCCCACACTGTAGAGTTCTGTCATCAATACCCACTGATACCTCAGGCTaGTCCAGCAGGCAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KQCHFRPTPHCRVLSSIPTDTSG*SSRQLT Trigger: TGTCAGCTGCCTGCTGGAGCAGCCTGAGGTATCAGT...GGGTATTGATGACAGAACTCTACAGTGTGGGGTTGGTCTAAAATGGCATTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | GTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAGATGAGTGTACTGACTTaGCACTTTTCGAAGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VKCKAGVQPRGPRDPTRQMSVLT*HFSKMN Trigger: GTTCATCTTCGAAAAGTGCCAAGTCAGTACACTCAT...CTGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGTTCCAGAAAGCAGCCTaGATTAGCTGCCTTAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KANTVLSCICSGPSCLSPFQKAA*ISCLKR Trigger: TCTTTTAAGGCAGCTAATCCAGGCTGCTTTCTGGAA...CGGGCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAATAGTGATGTGTGACTaGAAACCTGAAGTCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKVQSRGATKRTERSYQTIVMCD*KPEVSK Trigger: TTTGCTGACTTCAGGTTTTCAGTCACACATCACTAT...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAATTCGTCGCCATTTGTaGTGTATTTGGACAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKVQSRGATKRTERSYQTIRRHL*CIWTNS Trigger: ACTGTTTGTCCAAATACATCACAAATGGCGACGAAT...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | CCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCGGCACTTTTCGAAGATaGACCATTTCAAAGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PRKANTVLSCICSGPSCLGTFRR*TISKSV Trigger: TACTGACTTTGAAATGGTTCATCTTCGAAAAGTGCC...GAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | TCAAGTGGGAATTTTAGGTCCCAAAATAATTTACAATCACCAAGGAGAGGTCCCTCTGTATCTCTGAGATaGTCCAGGCCCAGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNFRSQNNLQSPRRGPSVSLR*SRPSWP Trigger: AGGCCAGCTGGGCCTGGACCATCTCAGAGATACAGA...GGGACCTCTCCTTGGTGATTGTAAATTATTTTGGGACCTAAAATTCCCACTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | CCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGTTGTTTTCCCATCTaGAACGCATTTCAAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PRKANTVLSCICSGPSCLSCFPI*NAFQEQ Trigger: TTGTTCTTGAAATGCGTTTCAGATGGGAAAACAACT...GAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR GCA 90 bp | AAACAATGCCATTTTAGACCAACCCCACACTGTAGAGTTCTGTCATCAATACCCCTTCTACCCACATGTTaGTGGGGATCTTCATACGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQCHFRPTPHCRVLSSIPLLPTC*WGSSYG Trigger: CCCGTATGAAGATCCCCAGCAACATGTGGGTAGAAG...GGGTATTGATGACAGAACTCTACAGTGTGGGGTTGGTCTAAAATGGCATTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTATTCACAGGCACCAAATaGCAACTTGCCGAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVFTGTK*QLAELQ Trigger: CTGGAGTTCGGCAAGTTGCCATTTGGTGCCTGTGAA...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CCA 90 bp | ACCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCACGTTGTTGCTAAATaGAGTTCACTGATAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TQESKHCPVLYLFWPLMPHVVAK*SSLIGS Trigger: AGATCCTATCAGTGAACTCCATTTAGCAACAACGTG...AGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | AAACAATGCCATTTTAGACCAACCCCACACTGTAGAGTTCTGTCATCAATACCCAGTTTGCCATCTCCTTaGGACCGCCTTTCTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQCHFRPTPHCRVLSSIPSLPSP*DRLSYH Trigger: GTGGTAAGAAAGGCGGTCCCAAGGAGATGGCAAACT...GGGTATTGATGACAGAACTCTACAGTGTGGGGTTGGTCTAAAATGGCATTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR GCA 90 bp | AAACAATGCCATTTTAGACCAACCCCACACTGTAGAGTTCTGTCATCAATACCCTCAAGAACAAATTCCTaGCAGAGATGTGCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KQCHFRPTPHCRVLSSIPSRTNS*QRCATP Trigger: GGGAGTGGCACATCTCTGGCAGGAATTTGTTCTTGA...GGGTATTGATGACAGAACTCTACAGTGTGGGGTTGGTCTAAAATGGCATTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | ATTTTAGGTCCCAAAATAATTTACAATCACCAAGGAGAGGTCCCGCAGCAGCGTTATTTGGACAAACAGTaGTACCTGGCAGCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILGPKIIYNHQGEVPQQRYLDKQ*YLAASV Trigger: AACACTGGCTGCCAGGTACCACTGTTTGTCCAAATA...ACGCTGCTGCGGGACCTCTCCTTGGTGATTGTAAATTATTTTGGGACCTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CCA 90 bp | TCAAGTGGGAATTTTAGGTCCCAAAATAATTTACAATCACCAAGGAGAGGTCCCTTCTGTCATGGGTGCTaGTTCCTGGGTCACTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNFRSQNNLQSPRRGPFCHGC*FLGHWN Trigger: ATTCCAGTGACCCAGGAACCAGCACCCATGACAGAA...GGGACCTCTCCTTGGTGATTGTAAATTATTTTGGGACCTAAAATTCCCACTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CCA 90 bp | AGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGCAGAACTTTGCTGGAATaGGCTATGATCTGCTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: RKANTVLSCICSGPSCLSRTLLE*AMICFI Trigger: TATAAAGCAGATCATAGCCCATTCCAGCAAAGTTCT...GCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTAAAAGGAAATTTCATCTaGTCGCTCTTCCCATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVKGNFI*SLFPCA Trigger: GGCACATGGGAAGAGCGATCAGATGAAATTTCCTTT...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | CTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGTATCTATGGGTTTCTAAGAAGCTTTGACAAAGCATaGGTTATATCAGCAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVFVLAPHASARIYGFLRSFDKA*VISATS Trigger: AGAAGTTGCTGATATAACTCATGCTTTGTCAAAGCT...TCTTAGAAACCCATAGATACGGGCTGAGGCATGAGGGGCCAGAACAAATACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CCA 90 bp | AAACAATGCCATTTTAGACCAACCCCACACTGTAGAGTTCTGTCATCAATACCCCAGGCAATGTGCTCTTaGAGGAAAGTCGTTATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQCHFRPTPHCRVLSSIPQAMCS*RKVVIH Trigger: ATGAATAACGACTTTCCTCCAAGAGCACATTGCCTG...GGGTATTGATGACAGAACTCTACAGTGTGGGGTTGGTCTAAAATGGCATTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | TCAAGTGGGAATTTTAGGTCCCAAAATAATTTACAATCACCAAGGAGAGGTCCCCTTCTTCCTTTACCTTaGGAACAGCTGCATGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGNFRSQNNLQSPRRGPLLPLP*EQLHES Trigger: TGATTCATGCAGCTGTTCTCAAGGTAAAGGAAGAAG...GGGACCTCTCCTTGGTGATTGTAAATTATTTTGGGACCTAAAATTCCCACTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR TCA 90 bp | TCAAGTGGGAATTTTAGGTCCCAAAATAATTTACAATCACCAAGGAGAGGTCCCTCCACAGTAGTAATCTaGAGGATGATTTCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNFRSQNNLQSPRRGPSTVVI*RMISSS Trigger: ACTGGAAGAAATCATCCTTCAGATTACTACTGTGGA...GGGACCTCTCCTTGGTGATTGTAAATTATTTTGGGACCTAAAATTCCCACTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CAA 90 bp | AGGACAGAGCCATCACCCCTGCACCGGGTGCTTCAGCCCACTCACAGCCTCGGCGCTTCTACCCACATGTaGCTGGGGATCTTCATACGG | + |
|
Preference number: 5 (lower is better) Translates to: RTEPSPLHRVLQPTHSLGASTHM*LGIFIR Trigger: CCGTATGAAGATCCCCAGCAACATGTGGGTAGAAGC...GCCGAGGCTGTGAGTGGGCTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CAA 90 bp | AGGACAGAGCCATCACCCCTGCACCGGGTGCTTCAGCCCACTCACAGCCTCGGCTTCTCAGTTCCAAATTaGGCCTTCAGGGACCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTEPSPLHRVLQPTHSLGFSVPN*AFRDRA Trigger: AGCCCGGTCCCTGAAGGCCAAATTTGGAACTGAGAA...GCCGAGGCTGTGAGTGGGCTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CAA 90 bp | AGGACAGAGCCATCACCCCTGCACCGGGTGCTTCAGCCCACTCACAGCCTCGGCGCATTCACAAACAGCTaGTGGATGATGCGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTEPSPLHRVLQPTHSLGAFTNS*WMMRPA Trigger: TGCTGGCCGCATCATCCACAAGCTGTTTGTGAATGC...GCCGAGGCTGTGAGTGGGCTGAAGCACCCGGTGCAGGGGTGATGGCTCTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS TCA 90 bp | CTTGTGGATGATGCGGCCAGCATGTCCTCTTCCTGCCCCAGTGACTaGTACCTCAGGCTGCTCCAGCAGGCAGCTGACAAACCTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVDDAASMSSSCPSD*YLRLLQQAADKPFQ Trigger: CTGGAAAGGTTTGTCAGCTGCCTGCTGGAGCAGCCTGAGGTATCAGTCACTGGGGCAGGAAGAGGACATGCTGGCCGCATCATCCACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
||
| CDS GCA 90 bp | TCCATATCGGAGAGGAGACAGGCACTCTGCATGCGTGCGCGGAGGTaGGCCCCCTCAGCAGATGTCCCTAATTTTGCTAAGACCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SISERRQALCMRARR*APSADVPNFAKTSD Trigger: GTCTGAGGTCTTAGCAAAATTAGGGACATCTGCTGAGGGGGCGCACCTCCGCGCACGCATGCAGAGTGCCTGTCTCCTCTCCGATATGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CCA 90 bp | TCACACAAGGCAGGAGGTGCCTGGCTAGGTCTGCAGGCTTCTGCATaGCCAGGTAGTGCAGGACCTTTTCAGCCTCTCGGGTGTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SHKAGGAWLGLQASA*PGSAGPFQPLGCHQ Trigger: TTGATGACACCCGAGAGGCTGAAAAGGTCCTGCACTACCTGGCCATGCAGAAGCCTGCAGACCTAGCCAGGCACCTCCTGCCTTGTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS GCA 90 bp | TTAGCTGCCTTAAAAGACTCCATATCGGAGAGGAGACAGGCACTCTaGATGCGTGCGCGGAGGTGCGCCCCCTCAGCAGATGTCCCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LAALKDSISERRQAL*MRARRCAPSADVPN Trigger: ATTAGGGACATCTGCTGAGGGGGCGCACCTCCGCGCACGCATGCAGAGTGCCTGTCTCCTCTCCGATATGGAGTCTTTTAAGGCAGCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS-3UTR CAA 90 bp | CATCACCCCTGCACCGGGTGCTTCAGCCCACTCACAGCCTCGGCACACACACCATTCTTGTCCTCAGGATaGGGGAAATGCAGAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HHPCTGCFSPLTASAHTPFLSSG*GKCRTL Trigger: CAAAGTTCTGCATTTCCCCAATCCTGAGGACAAGAA...TGGTGTGTGTGCCGAGGCTGTGAGTGGGCTGAAGCACCCGGTGCAGGGGTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CAA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACACCCTTCAGGACCACATaGCCCTTCTCGTCAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SKVQSRGATKRTERSYQTPFRTT*PFSSVT Trigger: GGTGACTGACGAGAAGGGCAATGTGGTCCTGAAGGG...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS GCA 90 bp | AGCAGGCAGCTGACAAACCTTTCCAGACCTTCCTTTTCCTCCTCGTaGTCACACTTCTCAGTTCCAAATTTGGCCTTCAGGGACCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRQLTNLSRPSFSSS*SHFSVPNLAFRDRA Trigger: AGCCCGGTCCCTGAAGGCCAAATTTGGAACTGAGAAGTGTGAGCACGAGGAGGAAAAGGAAGGTCTGGAAAGGTTTGTCAGCTGCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS-3UTR CAA 90 bp | CTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGTATCTATGGGTTTCTAAGAGCACCAAATGGCAACTaGCCGAACTCCAGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVFVLAPHASARIYGFLRAPNGN*PNSRPP Trigger: TGGGGGCCTGGAGTTCGGCAAGTTGCCATTTGGTGC...TCTTAGAAACCCATAGATACGGGCTGAGGCATGAGGGGCCAGAACAAATACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CAA 90 bp | CCATCTGGCTCAAGCTTGGTACTGGACATGCTTCTGGATGCTGGTGTGACTCCTAAGTTTGCCATCTCCTaGGGACCGCCTTTCTTACCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGSSLVLDMLLDAGVTPKFAIS*GPPFLP Trigger: TGGTAAGAAAGGCGGTCCCAAGGAGATGGCAAACTT...AGGAGTCACACCAGCATCCAGAAGCATGTCCAGTACCAAGCTTGAGCCAGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS TCA 90 bp | ATTGCCCTTCTCGTCAGTCACCTCCTCCTCAATGTAGTCCCTTGGTaGGTACCACCTCACGAAATCTTCCAGAAAGCAGCCTGGATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: IALLVSHLLLNVVPW*VPPHEIFQKAAWIS Trigger: GCTAATCCAGGCTGCTTTCTGGAAGATTTCGTGAGGTGGTACTCACCAAGGGACTACATTGAGGAGGAGGTGACTGACGAGAAGGGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS-3UTR CAA 90 bp | CCCAGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCACGAACACCAGGACCTaGACATTCTCCCATGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: PRKANTVLSCICSGPSCLTNTRT*TFSHVH Trigger: ATGTACATGGGAGAATGTCAAGGTCCTGGTGTTCGT...GAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CAA 90 bp | GTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACAGTCAAATGAGGCCACGTaGTTGCTAAATGGAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VKCKAGVQPRGPRDPTRQSNEAT*LLNGVH Trigger: GTGAACTCCATTTAGCAACAACGTGGCCTCATTTGA...CTGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CAA 90 bp | CTTCTGGATGCTGGTGTGACTCCTGCTGCTGGTTCCACAAGGGCGTCTCAGGTGAACAAGAGAATAGTATaGAGAACATCACTGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLDAGVTPAAGSTRASQVNKRIV*RTSLFS Trigger: GCTGAACAGTGATGTTCTCAATACTATTCTCTTGTT...CACCTGAGACGCCCTTGTGGAACCAGCAGCAGGAGTCACACCAGCATCCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CAA 90 bp | CTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCGTATCTATGGGTTTCTAAGACTTCTGGCTTTAAGTTaGCCATCTCCTTGGGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: LVFVLAPHASARIYGFLRLLALS*PSPWDR Trigger: GCGGTCCCAAGGAGATGGCAAACTTAAAGCCAGAAG...TCTTAGAAACCCATAGATACGGGCTGAGGCATGAGGGGCCAGAACAAATACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS TCA 90 bp | GACACAAGGCCAGTTTGTATGTTAGACTGTCGGAAGGCGCAGACTTaGACTGATTGTAGAGAGTATAGTCTCCAGCCTCTGGTGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DTRPVCMLDCRKAQT*TDCREYSLQPLVQE Trigger: TTCCTGCACCAGAGGCTGGAGACTATACTCTCTACAATCAGTTCAAGTCTGCGCCTTCCGACAGTCTAACATACAAACTGGCCTTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS-3UTR CAA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACACTGATAATTTATGAATaGGAACTGGCGCTGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKVQSRGATKRTERSYQTLIIYE*ELALAQ Trigger: CTGAGCCAGCGCCAGTTCCAATTCATAAATTATCAG...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CAA 90 bp | CCAACCCCACACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCAGCCAATTTTGGATTaGAAGATGTCCAGCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PTPHCRVLSSIPRKANTVQPILD*KMSSRP Trigger: AGGCCTGCTGGACATCTTCAAATCCAAAATTGGCTG...GACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGTGTGGGGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CAA 90 bp | AGGAAAGCAAACACTGTCCTGTCTTGTATTTGTTCTGGCCCCTCATGCCTCAGCCCTGGAATCAGAAAGTaGTTTTCCCATCTGAAACGC | + |
|
Preference number: 5 (lower is better) Translates to: RKANTVLSCICSGPSCLSPGIRK*FSHLKR Trigger: GCGTTTCAGATGGGAAAACAACTTTCTGATTCCAGG...GCTGAGGCATGAGGGGCCAGAACAAATACAAGACAGGACAGTGTTTGCTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CAA 90 bp | ATTTTAGGTCCCAAAATAATTTACAATCACCAAGGAGAGGTCCCGCAGCAGCGTCCTCAATGTAGTCCCTaGGTGAGTACCACCTCACGA | + |
|
Preference number: 5 (lower is better) Translates to: ILGPKIIYNHQGEVPQQRPQCSP*VSTTSR Trigger: TCGTGAGGTGGTACTCACCAAGGGACTACATTGAGG...ACGCTGCTGCGGGACCTCTCCTTGGTGATTGTAAATTATTTTGGGACCTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS TCA 90 bp | TTCAGGGACCGGGCTCGGGCTATTATAGCTTCCACAGTAGTAATCTaGAGGATGATTTCTTCCAGTTTCTTGTCCTCAGGATTGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FRDRARAIIASTVVI*RMISSSFLSSGLGK Trigger: TTTCCCCAATCCTGAGGACAAGAAACTGGAAGAAATCATCCTTCAGATTACTACTGTGGAAGCTATAATAGCCCGAGCCCGGTCCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS-3UTR CAA 90 bp | AGTAAAGTGCAAAGCAGGGGTGCAACCAAGAGGACCGAGAGATCCTACCAGACATCCGTATCTTCTTCTTaGCAGTGTGTACCATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKVQSRGATKRTERSYQTSVSSS*QCVPYL Trigger: CAAATATGGTACACACTGCAAAGAAGAAGATACGGA...TGTCTGGTAGGATCTCTCGGTCCTCTTGGTTGCACCCCTGCTTTGCACTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS GCA 90 bp | TTCCCATCTGAAACGCATTTCAAGAACAAATTCCTGCCAGAGATGTaGCACTCCCTTCAGCCCTCCATGGTAGAAGTTGATCATACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPSETHFKNKFLPEM*HSLQPSMVEVDHTK Trigger: CTTTGTATGATCAACTTCTACCATGGAGGGCTGAAGGGAGTGGCACATCTCTGGCAGGAATTTGTTCTTGAAATGCGTTTCAGATGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTACTGAGGCCAAAAGTATaGCTGCCAATCCTGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVLRPKV*LPILKH Trigger: GTGCTTCAGGATTGGCAGCAATACTTTTGGCCTCAG...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CAA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTACGACCAATGGGGAGCTaGAACAGGATCCAAATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVRPMGS*NRIQIR Trigger: TCTGATTTGGATCCTGTTCAAGCTCCCCATTGGTCG...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CAA 90 bp | ACAGATCCTGGGACTAAAGGCTCTACCAGCAAGTGTCCAGAATGTGAGTTAACGCAAGAATTTCATCCGTaGATTCCTTTCGACGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TDPGTKGSTSKCPECELTQEFHP*IPFDGK Trigger: TTTGCCGTCGAAAGGAATCAACGGATGAAATTCTTG...CGTTAACTCACATTCTGGACACTTGCTGGTAGAGCCTTTAGTCCCAGGATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CAA 90 bp | CCAACCCCACACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCATTTCTTCCAGTTTCTaGTCCTCAGGATTGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PTPHCRVLSSIPRKANTVISSSF*SSGLGK Trigger: TTTCCCCAATCCTGAGGACAAGAAACTGGAAGAAAT...GACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGTGTGGGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS TCA 90 bp | GTGATCCACTTGCTAGTCCTGGAATCAGAAAGTTGTTTTCCCATCTaGAACGCATTTCAAGAACAAATTCCTGCCAGAGATGTGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: VIHLLVLESESCFPI*NAFQEQIPARDVPL Trigger: GAGTGGCACATCTCTGGCAGGAATTTGTTCTTGAAATGCGTTTCAGATGGGAAAACAACTTTCTGATTCCAGGACTAGCAAGTGGATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGTGGGAATTTTAGGTCCCAAAATAATTTACAATCACCAAGGAGAGGTCCCGATCTGGTGATCCACTaGCTAGTCCTGGAATCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSGNFRSQNNLQSPRRGPDLVIH*LVLESE Trigger: TTCTGATTCCAGGACTAGCAAGTGGATCACCAGATC...GGGACCTCTCCTTGGTGATTGTAAATTATTTTGGGACCTAAAATTCCCACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CAA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTAAAAGGACAGCCAATTTaGGATTTGAAGATGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVKGQPI*DLKMSS Trigger: GCTGGACATCTTCAAATCCAAAATTGGCTGTCCTTT...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
||
| CDS-3UTR CAA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTACTGGCTCAGTCAGCTTaGACAAAGCATGAGTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVLAQSA*TKHELY Trigger: ATATAACTCATGCTTTGTCAAAGCTGACTGAGCCAG...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS-3UTR CAA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTAGGTGCAGGAATGCTATaGTCTATTGAAGTAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVGAGML*SIEVVP Trigger: TGGAACTACTTCAATAGACAATAGCATTCCTGCACC...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS CCA 90 bp | AAGCATGAGTTATATCAGCAACTTCTCTTCCCTCTTCTTCAAATGTaGATCGTCCAAGAATTTCATCCGTTGATTCCTTTCGACGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KHELYQQLLFPLLQM*IVQEFHPLIPFDGK Trigger: TTTGCCGTCGAAAGGAATCAACGGATGAAATTCTTGGACGATCCACATTTGAAGAAGAGGGAAGAGAAGTTGCTGATATAACTCATGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS-3UTR CAA 90 bp | ACTGTAGAGTTCTGTCATCAATACCCAGGAAAGCAAACACTGTCCTGTCTTGTAAATGAGTGTACTGACTaGGCACTTTTCGAAGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TVEFCHQYPGKQTLSCLVNECTD*ALFEDE Trigger: TTCATCTTCGAAAAGTGCCAAGTCAGTACACTCATT...TACAAGACAGGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS CCA 90 bp | AGTTTCTTGTCCTCAGGATTGGGGAAATGCAGAACTTTGCTGGAATaGGCTATGATCTGCTTTATAATCTTCTTAACAGAAGGAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFLSSGLGKCRTLLE*AMICFIIFLTEGMF Trigger: AAACATTCCTTCTGTTAAGAAGATTATAAAGCAGATCATAGCCCATTCCAGCAAAGTTCTGCATTTCCCCAATCCTGAGGACAAGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTGGGAATTTTAGGTCCCAAAATAATTTACAATCACCAAGGAGAGGTCCCTTTATCAGGAGACTCTaGTACAAGATAGTGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSGNFRSQNNLQSPRRGPFIRRL*YKIVMC Trigger: ACACATCACTATCTTGTACAAGAGTCTCCTGATAAA...GGGACCTCTCCTTGGTGATTGTAAATTATTTTGGGACCTAAAATTCCCACTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS CCA 72 bp | GCAGGAGGTGCCTGGCTAGGTCTGCAGGCTTCTGCATaGCCAGGTAGTGCAGGACCTTTTCAGCCTCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: AGGAWLGLQASA*PGSAGPFQPLG Trigger: CCCGAGAGGCTGAAAAGGTCCTGCACTACCTGGCCATGCAGAAGCCTGCAGACCTAGCCAGGCACCTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS TCA 72 bp | AGCTCCTCCTCTGGCAGAGCCACTGCCGCAGCCCGCTaGGCATTCACAAACAGCTTGTGGATGATGCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSSSGRATAAAR*AFTNSLWMMRP Trigger: TGGCCGCATCATCCACAAGCTGTTTGTGAATGCTCAGCGGGCTGCGGCAGTGGCTCTGCCAGAGGAGGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037649.6 |
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| CDS GCA 72 bp | GAGAGGAGACAGGCACTCTGCATGCGTGCGCGGAGGTaGGCCCCCTCAGCAGATGTCCCTAATTTTGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: ERRQALCMRARR*APSADVPNFAK Trigger: CTTAGCAAAATTAGGGACATCTGCTGAGGGGGCGCACCTCCGCGCACGCATGCAGAGTGCCTGTCTCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS GCA 72 bp | TTAAAAGACTCCATATCGGAGAGGAGACAGGCACTCTaGATGCGTGCGCGGAGGTGCGCCCCCTCAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: LKDSISERRQAL*MRARRCAPSAD Trigger: ATCTGCTGAGGGGGCGCACCTCCGCGCACGCATGCAGAGTGCCTGTCTCCTCTCCGATATGGAGTCTTTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | TCTGAGGAAAAGGCACCCGCGAGTCTGAAGTCCTCCTaGGTGAGTACGCTGTACATACGCTGTGGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SEEKAPASLKSS*VSTLYIRCGRA Trigger: GGCCCTGCCACAGCGTATGTACAGCGTACTCACCAAGGAGGACTTCAGACTCGCGGGTGCCTTTTCCTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | TCCCGTGCTGGTGCAGGCGGCCTTCTGGCTTTAAGTTaGCCATCTCCTTGGGACCGCCTTTCTTACCACTCT | + |
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Preference number: 6 (lower is better) Translates to: SRAGAGGLLALS*PSPWDRLSYHS Trigger: AGAGTGGTAAGAAAGGCGGTCCCAAGGAGATGGCAAACTTAAAGCCAGAAGGCCGCCTGCACCAGCACGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS TCA 72 bp | TTTTCAGCCTCTCGGGTGTCATCAAACAGTCTCCTCTaGCGTCGTGCTGGCACAGGCTTAGCAGTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: FSASRVSSNSLL*RRAGTGLAVSQ Trigger: CTGGGAGACTGCTAAGCCTGTGCCAGCACGACGTCAGAGGAGACTGTTTGATGACACCCGAGAGGCTGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS GCA 72 bp | AGAGGCTCTCCATTATGCAGCAGGGTAAGTTTCCCGTaGTGGTGCAGGCGGCCTTCTGGCTTTAAGTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGSPLCSRVSFP*WCRRPSGFKFA Trigger: GGCAAACTTAAAGCCAGAAGGCCGCCTGCACCAGCACGGGAAACTTACCCTGCTGCATAATGGAGAGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CCA 72 bp | GGCTCTCCATTATGCAGCAGGGTAAGTTTCCCGTGCTaGTGCAGGCGGCCTTCTGGCTTTAAGTTTGCCATC | + |
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Preference number: 6 (lower is better) Translates to: GSPLCSRVSFPC*CRRPSGFKFAI Trigger: GATGGCAAACTTAAAGCCAGAAGGCCGCCTGCACCAGCACGGGAAACTTACCCTGCTGCATAATGGAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS TCA 72 bp | ACTGCCGCAGCCTCATCAGAAGATTCAGTCAGCCGCTaGGCATTCACAAACAGCTTGTGGATGATGCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TAAASSEDSVSR*AFTNSLWMMRP Trigger: TGGCCGCATCATCCACAAGCTGTTTGTGAATGCTCAGCGGCTGACTGAATCTTCTGATGAGGCTGCGGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212506.2 |
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| CDS CAA 72 bp | TGCAGGCGGCCTTCTGGCTTTAAGTTTGCCATCTCCTaGGGACCGCCTTTCTTACCACTCTCCTGTCCGTTT | + |
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Preference number: 6 (lower is better) Translates to: CRRPSGFKFAIS*GPPFLPLSCPF Trigger: AAACGGACAGGAGAGTGGTAAGAAAGGCGGTCCCAAGGAGATGGCAAACTTAAAGCCAGAAGGCCGCCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS TCA 72 bp | CTCGTCAGTCACCTCCTCCTCAATGTAGTCCCTTGGTaGGTACCACCTCACGAAATCTTCCAGAAAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LVSHLLLNVVPW*VPPHEIFQKAA Trigger: GGCTGCTTTCTGGAAGATTTCGTGAGGTGGTACTCACCAAGGGACTACATTGAGGAGGAGGTGACTGACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS GCA 72 bp | CAGCTGGCCTCCAGTTTTCCCAGCATCCCCTGGATATaGACTAGTCGTACTATCCGAGAGGCTCGTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: QLASSFPSIPWI*TSRTIREARLF Trigger: AAAAAGACGAGCCTCTCGGATAGTACGACTAGTGCATATCCAGGGGATGCTGGGAAAACTGGAGGCCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | AAATGGAGTTCACTGATAGGATCTTCACAGGCACCAAATGGCAACTaGCCGAACTCCAGGCCCCCAACTTCTCCTCCCACAAGGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: KWSSLIGSSQAPNGN*PNSRPPTSPPTRAS Trigger: AGATGCCCTTGTGGGAGGAGAAGTTGGGGGCCTGGAGTTCGGCAAGTTGCCATTTGGTGCCTGTGAAGATCCTATCAGTGAACTCCATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | CCACATTGCCCTTCTCGTCAGTCACCTCCTCCTCAATGTAGTCCCTaGGTGAGTACCACCTCACGAAATCTTCCAGAAAGCAGCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PHCPSRQSPPPQCSP*VSTTSRNLPESSLD Trigger: ATCCAGGCTGCTTTCTGGAAGATTTCGTGAGGTGGTACTCACCAAGGGACTACATTGAGGAGGAGGTGACTGACGAGAAGGGCAATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | TCCCACAAGGGCATCTATATCTGGAGGCTGCTGAGGCCAAAAGTATaGCTGCCAATCCTGAAGCACGTATGTGAGCCGAATCGCAATGCT | + |
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Preference number: 6 (lower is better) Translates to: SHKGIYIWRLLRPKV*LPILKHVCEPNRNA Trigger: AGCATTGCGATTCGGCTCACATACGTGCTTCAGGATTGGCAGCAATACTTTTGGCCTCAGCAGCCTCCAGATATAGATGCCCTTGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | AGACCTTCCTTTTCCTCCTCGTGCTCACACTTCTCAGTTCCAAATTaGGCCTTCAGGGACCGGGCTCGGGCTATTATAGCTTCCACAGTA | + |
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Preference number: 6 (lower is better) Translates to: RPSFSSSCSHFSVPN*AFRDRARAIIASTV Trigger: TACTGTGGAAGCTATAATAGCCCGAGCCCGGTCCCTGAAGGCCAAATTTGGAACTGAGAAGTGTGAGCACGAGGAGGAAAAGGAAGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | CCTTCTCGTCAGTCACCTCCTCCTCAATGTAGTCCCTaGGTGAGTACCACCTCACGAAATCTTCCAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: PSRQSPPPQCSP*VSTTSRNLPES Trigger: GCTTTCTGGAAGATTTCGTGAGGTGGTACTCACCAAGGGACTACATTGAGGAGGAGGTGACTGACGAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | TTTTCCTCCTCGTGCTCACACTTCTCAGTTCCAAATTaGGCCTTCAGGGACCGGGCTCGGGCTATTATAGCT | + |
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Preference number: 6 (lower is better) Translates to: FSSSCSHFSVPN*AFRDRARAIIA Trigger: AGCTATAATAGCCCGAGCCCGGTCCCTGAAGGCCAAATTTGGAACTGAGAAGTGTGAGCACGAGGAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS GCA 72 bp | TTTTCCCATCTGAAACGCATTTCAAGAACAAATTCCTaGCAGAGATGTGCCACTCCCTTCAGCCCTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: FSHLKRISRTNS*QRCATPFSPPW Trigger: CCATGGAGGGCTGAAGGGAGTGGCACATCTCTGGCAGGAATTTGTTCTTGAAATGCGTTTCAGATGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS TCA 72 bp | GGAACTGGCGCTGGCTCAGTCAGCTTTGACAAAGCATaGGTTATATCAGCAACTTCTCTTCCCTCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GTGAGSVSFDKA*VISATSLPSSS Trigger: TGAAGAAGAGGGAAGAGAAGTTGCTGATATAACTCATGCTTTGTCAAAGCTGACTGAGCCAGCGCCAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS TCA 72 bp | CCAGTTTGTATGTTAGACTGTCGGAAGGCGCAGACTTaGACTGATTGTAGAGAGTATAGTCTCCAGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PVCMLDCRKAQT*TDCREYSLQPL Trigger: CAGAGGCTGGAGACTATACTCTCTACAATCAGTTCAAGTCTGCGCCTTCCGACAGTCTAACATACAAACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS GCA 72 bp | ACTAAGGAGGAGGTTACACTTGGATTCACTGAGAACTaGATCACTGTGTGCAGCAGGAGCAATCACCACAAA | + |
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Preference number: 6 (lower is better) Translates to: TKEEVTLGFTEN*ITVCSRSNHHK Trigger: TTTGTGGTGATTGCTCCTGCTGCACACAGTGATGCAGTTCTCAGTGAATCCAAGTGTAACCTCCTCCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | TTCTCCCATGTACATTCGTCGCCATTTGTGATGTATTaGGACAAACAGTGGTACCTGGCAGCCAGTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSHVHSSPFVMY*DKQWYLAASVS Trigger: GGAAACACTGGCTGCCAGGTACCACTGTTTGTCCAAATACATCACAAATGGCGACGAATGTACATGGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | GTGTTTCCCAAAGCAATAGAAATGGAACTAAGGAGGAGGTTACACTaGGATTCACTGAGAACTGCATCACTGTGTGCAGCAGGAGCAATC | + |
|
Preference number: 6 (lower is better) Translates to: VFPKAIEMELRRRLH*DSLRTASLCAAGAI Trigger: GATTGCTCCTGCTGCACACAGTGATGCAGTTCTCAGTGAATCCAAGTGTAACCTCCTCCTTAGTTCCATTTCTATTGCTTTGGGAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | ACCTTGACATTCTCCCATGTACATTCGTCGCCATTTGTGATGTATTaGGACAAACAGTGGTACCTGGCAGCCAGTGTTTCCCAAAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: TLTFSHVHSSPFVMY*DKQWYLAASVSQSN Trigger: ATTGCTTTGGGAAACACTGGCTGCCAGGTACCACTGTTTGTCCAAATACATCACAAATGGCGACGAATGTACATGGGAGAATGTCAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS TCA 72 bp | CGGGCTCGGGCTATTATAGCTTCCACAGTAGTAATCTaGAGGATGATTTCTTCCAGTTTCTTGTCCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RARAIIASTVVI*RMISSSFLSSG Trigger: TCCTGAGGACAAGAAACTGGAAGAAATCATCCTTCAGATTACTACTGTGGAAGCTATAATAGCCCGAGCCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS TCA 72 bp | GAGGCAATGGAGTTAAAGGACAGCCAATTTTGGATTTaGAGATGTCCAGCAGGCCTGACAAATGAGTGTACT | + |
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Preference number: 6 (lower is better) Translates to: EAMELKDSQFWI*RCPAGLTNECT Trigger: AGTACACTCATTTGTCAGGCCTGCTGGACATCTTCAAATCCAAAATTGGCTGTCCTTTAACTCCATTGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | ATGAACCATTTCAAAGTCAGTACGAACACCAGGACCTaGACATTCTCCCATGTACATTCGTCGCCATTTGTG | + |
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Preference number: 6 (lower is better) Translates to: MNHFKVSTNTRT*TFSHVHSSPFV Trigger: CACAAATGGCGACGAATGTACATGGGAGAATGTCAAGGTCCTGGTGTTCGTACTGACTTTGAAATGGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | AGATGTCCAGCAGGCCTGACAAATGAGTGTACTGACTaGGCACTTTTCGAAGATGAACCATTTCAAAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: RCPAGLTNECTD*ALFEDEPFQSQ Trigger: CTGACTTTGAAATGGTTCATCTTCGAAAAGTGCCAAGTCAGTACACTCATTTGTCAGGCCTGCTGGACATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | GATGCAGTAAGCAGCATCTTAGATCTGGTGATCCACTaGCTAGTCCTGGAATCAGAAAGTTGTTTTCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: DAVSSILDLVIH*LVLESESCFPI Trigger: GATGGGAAAACAACTTTCTGATTCCAGGACTAGCAAGTGGATCACCAGATCTAAGATGCTGCTTACTGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | AAAGCAATAGAAATGGAACTAAGGAGGAGGTTACACTaGGATTCACTGAGAACTGCATCACTGTGTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: KAIEMELRRRLH*DSLRTASLCAA Trigger: TGCTGCACACAGTGATGCAGTTCTCAGTGAATCCAAGTGTAACCTCCTCCTTAGTTCCATTTCTATTGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | CATCTTAGATCTGGTGATCCACTTGCTAGTCCTGGAATCAGAAAGTaGTTTTCCCATCTGAAACGCATTTCAAGAACAAATTCCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HLRSGDPLASPGIRK*FSHLKRISRTNSCQ Trigger: CTGGCAGGAATTTGTTCTTGAAATGCGTTTCAGATGGGAAAACAACTTTCTGATTCCAGGACTAGCAAGTGGATCACCAGATCTAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | ATTTATGAATTGGAACTGGCGCTGGCTCAGTCAGCTTaGACAAAGCATGAGTTATATCAGCAACTTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IYELELALAQSA*TKHELYQQLLF Trigger: GAAGAGAAGTTGCTGATATAACTCATGCTTTGTCAAAGCTGACTGAGCCAGCGCCAGTTCCAATTCATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | AGTTTCTTGTCCTCAGGATTGGGGAAATGCAGAACTTaGCTGGAATGGGCTATGATCTGCTTTATAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFLSSGLGKCRT*LEWAMICFIIF Trigger: GAAGATTATAAAGCAGATCATAGCCCATTCCAGCAAAGTTCTGCATTTCCCCAATCCTGAGGACAAGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | TTTTCGAAGATGAACCATTTCAAAGTCAGTACGAACACCAGGACCTaGACATTCTCCCATGTACATTCGTCGCCATTTGTGATGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSKMNHFKVSTNTRT*TFSHVHSSPFVMYL Trigger: CAAATACATCACAAATGGCGACGAATGTACATGGGAGAATGTCAAGGTCCTGGTGTTCGTACTGACTTTGAAATGGTTCATCTTCGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | TGTTCAGCGGCGACTCTTCCCCTCTGTGCTTCCGTATCTTCTTCTTaGCAGTGTGTACCATATTTGAAACTGATAATTTATGAATTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSAATLPLCASVSSS*QCVPYLKLIIYELE Trigger: TTCCAATTCATAAATTATCAGTTTCAAATATGGTACACACTGCAAAGAAGAAGATACGGAAGCACAGAGGGGAAGAGTCGCCGCTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | AAACTGATAATTTATGAATTGGAACTGGCGCTGGCTCAGTCAGCTTaGACAAAGCATGAGTTATATCAGCAACTTCTCTTCCCTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KLIIYELELALAQSA*TKHELYQQLLFPLL Trigger: AAGAAGAGGGAAGAGAAGTTGCTGATATAACTCATGCTTTGTCAAAGCTGACTGAGCCAGCGCCAGTTCCAATTCATAAATTATCAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS TCA 72 bp | TTTGCAGTGTGTACCATATTTGAAACTGATAATTTATaGATTGGAACTGGCGCTGGCTCAGTCAGCTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FAVCTIFETDNL*IGTGAGSVSFD Trigger: GTCAAAGCTGACTGAGCCAGCGCCAGTTCCAATTCATAAATTATCAGTTTCAAATATGGTACACACTGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS TCA 72 bp | TTGCTAGTCCTGGAATCAGAAAGTTGTTTTCCCATCTaGAACGCATTTCAAGAACAAATTCCTGCCAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLVLESESCFPI*NAFQEQIPARD Trigger: ATCTCTGGCAGGAATTTGTTCTTGAAATGCGTTTCAGATGGGAAAACAACTTTCTGATTCCAGGACTAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CCA 72 bp | TCCTCAGGATTGGGGAAATGCAGAACTTTGCTGGAATaGGCTATGATCTGCTTTATAATCTTCTTAACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSGLGKCRTLLE*AMICFIIFLTE Trigger: TTCTGTTAAGAAGATTATAAAGCAGATCATAGCCCATTCCAGCAAAGTTCTGCATTTCCCCAATCCTGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | TCTGGTGATCCACTTGCTAGTCCTGGAATCAGAAAGTaGTTTTCCCATCTGAAACGCATTTCAAGAACAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SGDPLASPGIRK*FSHLKRISRTN Trigger: ATTTGTTCTTGAAATGCGTTTCAGATGGGAAAACAACTTTCTGATTCCAGGACTAGCAAGTGGATCACCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 90 bp | ATTTCTTCCAGTTTCTTGTCCTCAGGATTGGGGAAATGCAGAACTTaGCTGGAATGGGCTATGATCTGCTTTATAATCTTCTTAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: ISSSFLSSGLGKCRT*LEWAMICFIIFLTE Trigger: TTCTGTTAAGAAGATTATAAAGCAGATCATAGCCCATTCCAGCAAAGTTCTGCATTTCCCCAATCCTGAGGACAAGAAACTGGAAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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| CDS CAA 72 bp | CTTCTTCAAATGTGGATCGTCCAAGAATTTCATCCGTaGATTCCTTTCGACGGCAAATTTTTAAAAATTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLQMWIVQEFHP*IPFDGKFLKIQ Trigger: CTGAATTTTTAAAAATTTGCCGTCGAAAGGAATCAACGGATGAAATTCTTGGACGATCCACATTTGAAGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037649.6 ENSMUST00000212506.2 |
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