Pregenerated sensors for RAB3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003411Ensembl transcript IDs: ENSMUST00000003502.4, ENSMUST00000106650.9, ENSMUST00000106651.9
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGATTAGCACTGTCCTGTCACCACAGCAACTGCCCGGGGCCCTGTaGGCATCCGTGGTAACAGGCTCAGGGCTCTACAAATCAAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: GISTVLSPQQLPGAL*ASVVTGSGLYKSKL Trigger: AAGCTTTGATTTGTAGAGCCCTGAGCCTGTTACCACGGATGCCCACAGGGCCCCGGGCAGTTGCTGTGGTGACAGGACAGTGCTAATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR CCA 90 bp | ACCGCAGGGGCTGGCAAAGAACTCATCTTGCTTGGGATTGGGGAATaGACAGTAATGGAGAGAAGCGGAGGAGAAACAGGGCACGACATG | + |
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Preference number: 1 (lower is better) Translates to: TAGAGKELILLGIGE*TVMERSGGETGHDM Trigger: CATGTCGTGCCCTGTTTCTCCTCCGCTTCTCTCCATTACTGTCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCCTGCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR CCA 90 bp | GCAGAGAACCGCAGGGGCTGGCAAAGAACTCATCTTGCTTGGGATTaGGGAATGGACAGTAATGGAGAGAAGCGGAGGAGAAACAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: AENRRGWQRTHLAWD*GMDSNGEKRRRNRA Trigger: TGCCCTGTTTCTCCTCCGCTTCTCTCCATTACTGTCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCCTGCGGTTCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR CCA 90 bp | CCATCTGCAGAGAACCGCAGGGGCTGGCAAAGAACTCATCTTGCTTaGGATTGGGGAATGGACAGTAATGGAGAGAAGCGGAGGAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: PSAENRRGWQRTHLA*DWGMDSNGEKRRRN Trigger: GTTTCTCCTCCGCTTCTCTCCATTACTGTCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCCTGCGGTTCTCTGCAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR TCA 90 bp | GCAGAAAATACCAACCACAGCTTCCTGCTCCTGGCCACTACAGCCTaGGCCTGCTTCCCTATAGAGCTCCCTTTACCTAGATCAGCTAAC | + |
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Preference number: 1 (lower is better) Translates to: AENTNHSFLLLATTA*ACFPIELPLPRSAN Trigger: GTTAGCTGATCTAGGTAAAGGGAGCTCTATAGGGAAGCAGGCTCAGGCTGTAGTGGCCAGGAGCAGGAAGCTGTGGTTGGTATTTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR GCA 90 bp | TGGGCATCCGTGGTAACAGGCTCAGGGCTCTACAAATCAAAGCTTTaGTTGCCCCACAGGGAGCCTGATAGGAAACAAGCAGGTTGTACT | + |
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Preference number: 1 (lower is better) Translates to: WASVVTGSGLYKSKL*LPHREPDRKQAGCT Trigger: AGTACAACCTGCTTGTTTCCTATCAGGCTCCCTGTGGGGCAAGCAAAGCTTTGATTTGTAGAGCCCTGAGCCTGTTACCACGGATGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR GCA 90 bp | CAGGCTGCCCTGGAACAGTTGATCCTTCTGCCTCAACCTTCAATATaGTGGAATTACAGTCCTGAGCCACCGCTCCCATCTCATAGAAGG | + |
|
Preference number: 1 (lower is better) Translates to: QAALEQLILLPQPSI*WNYSPEPPLPSHRR Trigger: CCTTCTATGAGATGGGAGCGGTGGCTCAGGACTGTAATTCCAGCATATTGAAGGTTGAGGCAGAAGGATCAACTGTTCCAGGGCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR TCA 90 bp | GACTGCAACATGTCCACAGAGCTGACTCTATTTGGCCCTTTCATTTaGTCACTGGGCCTGATACCAGCTGTGTGCCTTTCCAGGACAACG | + |
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Preference number: 1 (lower is better) Translates to: DCNMSTELTLFGPFI*SLGLIPAVCLSRTT Trigger: CGTTGTCCTGGAAAGGCACACAGCTGGTATCAGGCCCAGTGATCAAATGAAAGGGCCAAATAGAGTCAGCTCTGTGGACATGTTGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR GCA 90 bp | ATAACCAAGCCTTCCCCTGGTCCACTAAGGATGTTGACAAGAGTGTaGAGAAAATACCAACCACAGCTTCCTGCTCCTGGCCACTACAGC | + |
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Preference number: 1 (lower is better) Translates to: ITKPSPGPLRMLTRV*RKYQPQLPAPGHYS Trigger: GCTGTAGTGGCCAGGAGCAGGAAGCTGTGGTTGGTATTTTCTGCACACTCTTGTCAACATCCTTAGTGGACCAGGGGAAGGCTTGGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR CCA 90 bp | GCTGCCCTGGAACAGTTGATCCTTCTGCCTCAACCTTCAATATGCTaGAATTACAGTCCTGAGCCACCGCTCCCATCTCATAGAAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: AALEQLILLPQPSIC*NYSPEPPLPSHRRC Trigger: ACACCTTCTATGAGATGGGAGCGGTGGCTCAGGACTGTAATTCCAGCATATTGAAGGTTGAGGCAGAAGGATCAACTGTTCCAGGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR TCA 90 bp | GGCCTGATACCAGCTGTGTGCCTTTCCAGGACAACGAGATGCCCTTaGGTCGCTATATTAGCATTTGTTCAGGACTATGTCCCCTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: GLIPAVCLSRTTRCP*VAILAFVQDYVPLS Trigger: AGACAAGGGGACATAGTCCTGAACAAATGCTAATATAGCGACTCAAGGGCATCTCGTTGTCCTGGAAAGGCACACAGCTGGTATCAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR TCA 90 bp | GCTTGCCCCACAGGGAGCCTGATAGGAAACAAGCAGGTTGTACTTTaGGACATTTTCTTTAATAGTATTAGCTGTGCAGGTGGGCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: ACPTGSLIGNKQVVL*DIFFNSISCAGGPH Trigger: GTGAGGCCCACCTGCACAGCTAATACTATTAAAGAAAATGTCTCAAAGTACAACCTGCTTGTTTCCTATCAGGCTCCCTGTGGGGCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR CCA 90 bp | TCAAAGACAATGCCTTGGGCCTGTGGAAATAACCAAGCCTTCCCCTaGTCCACTAAGGATGTTGACAAGAGTGTGCAGAAAATACCAACC | + |
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Preference number: 1 (lower is better) Translates to: SKTMPWACGNNQAFP*STKDVDKSVQKIPT Trigger: GGTTGGTATTTTCTGCACACTCTTGTCAACATCCTTAGTGGACCAGGGGAAGGCTTGGTTATTTCCACAGGCCCAAGGCATTGTCTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGCCAGTCACCGTGGGCAAGTCAGTCCCAAAGCCATGCAGGCCACGTGCCAGGTTAGTATCTGTAGCTaGGGCCATCTGCAGAGAACC | + |
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Preference number: 2 (lower is better) Translates to: IASHRGQVSPKAMQATCQVSICS*GHLQRT Trigger: GGTTCTCTGCAGATGGCCCCAGCTACAGATACTAAC...CTGGCACGTGGCCTGCATGGCTTTGGGACTGACTTGCCCACGGTGACTGGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGCCAGTCACCGTGGGCAAGTCAGTCCCAAAGCCATGCAGGCCACGTGCCAGCTTGGGATTGGGGAATaGACAGTAATGGAGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: IASHRGQVSPKAMQATCQLGIGE*TVMERS Trigger: GCTTCTCTCCATTACTGTCCATTCCCCAATCCCAAG...CTGGCACGTGGCCTGCATGGCTTTGGGACTGACTTGCCCACGGTGACTGGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTTTAATAGTATTAGCTGTGCAGGTGGGCCTCACTTTACACACTGGCCAGGTAGCTGGGGCCATCTaGAGAGAACCGCAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: FSLIVLAVQVGLTLHTGQVAGAI*REPQGL Trigger: CAGCCCCTGCGGTTCTCTGCAGATGGCCCCAGCTAC...CTGGCCAGTGTGTAAAGTGAGGCCCACCTGCACAGCTAATACTATTAAAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR CAA 90 bp | GCATCCGTGGTAACAGGCTCAGGGCTCTACAAATCAAAGCTTTGCTaGCCCCACAGGGAGCCTGATAGGAAACAAGCAGGTTGTACTTTG | + |
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Preference number: 2 (lower is better) Translates to: ASVVTGSGLYKSKLC*PHREPDRKQAGCTL Trigger: CAAAGTACAACCTGCTTGTTTCCTATCAGGCTCCCTGTGGGGCAAGCAAAGCTTTGATTTGTAGAGCCCTGAGCCTGTTACCACGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR CAA 90 bp | GGGCCTGTGGAAATAACCAAGCCTTCCCCTGGTCCACTAAGGATGTaGACAAGAGTGTGCAGAAAATACCAACCACAGCTTCCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GPVEITKPSPGPLRM*TRVCRKYQPQLPAP Trigger: AGGAGCAGGAAGCTGTGGTTGGTATTTTCTGCACACTCTTGTCAACATCCTTAGTGGACCAGGGGAAGGCTTGGTTATTTCCACAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR CAA 90 bp | GGGCCTGATACCAGCTGTGTGCCTTTCCAGGACAACGAGATGCCCTaGAGTCGCTATATTAGCATTTGTTCAGGACTATGTCCCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: GPDTSCVPFQDNEMP*SRYISICSGLCPLV Trigger: GACAAGGGGACATAGTCCTGAACAAATGCTAATATAGCGACTCAAGGGCATCTCGTTGTCCTGGAAAGGCACACAGCTGGTATCAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR GCA 90 bp | CTGACTCCCCCTTTCCAGGTGGGCTGTGGAGGAGTGCCTGACAGGTTAGAAAAGCTATGTCAAAGACAATaGCTTGGGCCTGTGGAAATA | + |
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Preference number: 2 (lower is better) Translates to: LTPPFQVGCGGVPDRLEKLCQRQ*LGPVEI Trigger: TATTTCCACAGGCCCAAGGCATTGTCTTTGACATAG...CTTTTCTAACCTGTCAGGCACTCCTCCACAGCCCACCTGGAAAGGGGGAGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR GCA 90 bp | TGTTGTAAAAGCACAGACCTAGGGATGCACTCCCTGCCTTTGGATCCCCACTCTTGGCAGCAGAATTGGTaGAAATGGGGTGAGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: CCKSTDLGMHSLPLDPHSWQQNW*KWGEKV Trigger: CACCTTCTCACCCCATTTGCACCAATTCTGCTGCCA...AGAGTGGGGATCCAAAGGCAGGGAGTGCATCCCTAGGTCTGTGCTTTTACAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR CAA 90 bp | AGACTGCAACATGTCCACAGAGCTGACTCTATTTGGCCCTTTCATTaGATCACTGGGCCTGATACCAGCTGTGTGCCTTTCCAGGACAAC | + |
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Preference number: 2 (lower is better) Translates to: RLQHVHRADSIWPFH*ITGPDTSCVPFQDN Trigger: GTTGTCCTGGAAAGGCACACAGCTGGTATCAGGCCCAGTGATCAAATGAAAGGGCCAAATAGAGTCAGCTCTGTGGACATGTTGCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTTAATAGTATTAGCTGTGCAGGTGGGCCTCACTTTACACACTGGCCAGAAACAGGGCACGACATaGGGAAACAGGAGGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: FSLIVLAVQVGLTLHTGQKQGTT*GNRRVG Trigger: GCCCACCCTCCTGTTTCCCCATGTCGTGCCCTGTTT...CTGGCCAGTGTGTAAAGTGAGGCCCACCTGCACAGCTAATACTATTAAAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR CAA 90 bp | GACCTGACAGCTTGGGCAGGATTCCAAGCGACGGGATCACACTTATaGGAAAAGAGCTGTGGTGCAGAATGTTGTAAAAGCACAGACCTA | + |
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Preference number: 2 (lower is better) Translates to: DLTAWAGFQATGSHL*EKSCGAECCKSTDL Trigger: TAGGTCTGTGCTTTTACAACATTCTGCACCACAGCTCTTTTCCAATAAGTGTGATCCCGTCGCTTGGAATCCTGCCCAAGCTGTCAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTGTAAAAGCACAGACCTAGGGATGCACTCCCTGCCTTTGGATCCCCACTCTCATCTTGCTTGGGATTaGGGAATGGACAGTAATGGA | + |
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Preference number: 2 (lower is better) Translates to: CCKSTDLGMHSLPLDPHSHLAWD*GMDSNG Trigger: TCCATTACTGTCCATTCCCCAATCCCAAGCAAGATG...AGAGTGGGGATCCAAAGGCAGGGAGTGCATCCCTAGGTCTGTGCTTTTACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCTTCCCTATAGAGCTCCCTTTACCTAGATCAGCTAACCTCTCTCCTCATAGAACTCATCTTGCTTaGGATTGGGGAATGGACAGT | + |
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Preference number: 2 (lower is better) Translates to: ACFPIELPLPRSANLSPHRTHLA*DWGMDS Trigger: ACTGTCCATTCCCCAATCCCAAGCAAGATGAGTTCT...ATGAGGAGAGAGGTTAGCTGATCTAGGTAAAGGGAGCTCTATAGGGAAGCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTGTAAAAGCACAGACCTAGGGATGCACTCCCTGCCTTTGGATCCCCACTCTAGACCCTCTGCAGAATaGCAAATGGATATGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: CCKSTDLGMHSLPLDPHSRPSAE*QMDMQL Trigger: TAACTGCATATCCATTTGCCATTCTGCAGAGGGTCT...AGAGTGGGGATCCAAAGGCAGGGAGTGCATCCCTAGGTCTGTGCTTTTACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR CAA 90 bp | TGTACTTGTGTTTGTAGGTTCTTCATTGCATTTATAGGTTCTTCATaGCCAGTCACCGTGGGCAAGTCAGTCCCAAAGCCATGCAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: CTCVCRFFIAFIGSS*PVTVGKSVPKPCRP Trigger: TGGCCTGCATGGCTTTGGGACTGACTTGCCCACGGTGACTGGCAATGAAGAACCTATAAATGCAATGAAGAACCTACAAACACAAGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR CAA 90 bp | CCACCGCTCCCATCTCATAGAAGGTGTGCTTTAAAAGAAAGAGGGTaGTGGGGAGCTAGTGAAGTCCAGGGTGAATGTAAATTGTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PPLPSHRRCALKERG*WGASEVQGECKLLN Trigger: GTTCAACAATTTACATTCACCCTGGACTTCACTAGCTCCCCACAACCCTCTTTCTTTTAAAGCACACCTTCTATGAGATGGGAGCGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTATCTTGAACCTTCTTCATAAGAGGGAGTTTTCTGTTGTAAAAGGAGTGAAACAGGGCACGACATaGGGAAACAGGAGGGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VSILNLLHKREFSVVKGVKQGTT*GNRRVG Trigger: GCCCACCCTCCTGTTTCCCCATGTCGTGCCCTGTTT...CACTCCTTTTACAACAGAAAACTCCCTCTTATGAAGAAGGTTCAAGATAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTTAATAGTATTAGCTGTGCAGGTGGGCCTCACTTTACACACTGGCCAGGTTAGTATCTGTAGCTaGGGCCATCTGCAGAGAACC | + |
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Preference number: 2 (lower is better) Translates to: FSLIVLAVQVGLTLHTGQVSICS*GHLQRT Trigger: GGTTCTCTGCAGATGGCCCCAGCTACAGATACTAAC...CTGGCCAGTGTGTAAAGTGAGGCCCACCTGCACAGCTAATACTATTAAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR-3UTR GCA 90 bp | CTACATCGTGAGACAAAAGAGCAGGCTAGAAAGGTAAGAACCTGTGTCCATCTATACAAATCAAAGCTTTaGTTGCCCCACAGGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LHRETKEQARKVRTCVHLYKSKL*LPHREP Trigger: AGGCTCCCTGTGGGGCAAGCAAAGCTTTGATTTGTA...TAGATGGACACAGGTTCTTACCTTTCTAGCCTGCTCTTTTGTCTCACGATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR-3UTR CCA 90 bp | GAGACATTTTCTTTAATAGTATTAGCTGTGCAGGTGGGCCTCACTTTACACACTGAGAACCGCAGGGGCTaGCAAAGAACTCATCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: ETFSLIVLAVQVGLTLHTENRRG*QRTHLA Trigger: AGCAAGATGAGTTCTTTGCCAGCCCCTGCGGTTCTC...AGTGTGTAAAGTGAGGCCCACCTGCACAGCTAATACTATTAAAGAAAATGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTTAATAGTATTAGCTGTGCAGGTGGGCCTCACTTTACACACTGGCCAGAGAACTCATCTTGCTTaGGATTGGGGAATGGACAGT | + |
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Preference number: 2 (lower is better) Translates to: FSLIVLAVQVGLTLHTGQRTHLA*DWGMDS Trigger: ACTGTCCATTCCCCAATCCCAAGCAAGATGAGTTCT...CTGGCCAGTGTGTAAAGTGAGGCCCACCTGCACAGCTAATACTATTAAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR-3UTR GCA 90 bp | GAGACATTTTCTTTAATAGTATTAGCTGTGCAGGTGGGCCTCACTTTACACACTGCAAAGAACTCATCTTaGTTGGGATTGGGGAATGGA | + |
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Preference number: 2 (lower is better) Translates to: ETFSLIVLAVQVGLTLHTAKNSS*LGLGNG Trigger: TCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGC...AGTGTGTAAAGTGAGGCCCACCTGCACAGCTAATACTATTAAAGAAAATGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAAAGATTCTTTCCAAGTCTCTATCTTGAACCTTCTTCATAAGAGGGAGTTTCTTGGGATTGGGGAATaGACAGTAATGGAGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RKDSFQVSILNLLHKREFLGIGE*TVMERS Trigger: GCTTCTCTCCATTACTGTCCATTCCCCAATCCCAAG...AAACTCCCTCTTATGAAGAAGGTTCAAGATAGAGACTTGGAAAGAATCTTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR-3UTR GCA 90 bp | AGAAAAGATTCTTTCCAAGTCTCTATCTTGAACCTTCTTCATAAGAGGGAGTTTGCAAAGAACTCATCTTaGTTGGGATTGGGGAATGGA | + |
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Preference number: 2 (lower is better) Translates to: RKDSFQVSILNLLHKREFAKNSS*LGLGNG Trigger: TCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGC...AAACTCCCTCTTATGAAGAAGGTTCAAGATAGAGACTTGGAAAGAATCTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR CCA 72 bp | ACTGTCCTGTCACCACAGCAACTGCCCGGGGCCCTGTaGGCATCCGTGGTAACAGGCTCAGGGCTCTACAAA | + |
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Preference number: 3 (lower is better) Translates to: TVLSPQQLPGAL*ASVVTGSGLYK Trigger: TTTGTAGAGCCCTGAGCCTGTTACCACGGATGCCCACAGGGCCCCGGGCAGTTGCTGTGGTGACAGGACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR GCA 72 bp | TTGCCAGTCACCGTGGGCAAGTCAGTCCCAAAGCCATaGAGGCCACGTGCCAGAACTAGAAAGTCTGGAACT | + |
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Preference number: 3 (lower is better) Translates to: LPVTVGKSVPKP*RPRARTRKSGT Trigger: AGTTCCAGACTTTCTAGTTCTGGCACGTGGCCTGCATGGCTTTGGGACTGACTTGCCCACGGTGACTGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR TCA 72 bp | GACCGGCATCTGCAGCCCAGGCTGCCCTGGAACAGTTaGTCCTTCTGCCTCAACCTTCAATATGCTGGAATT | + |
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Preference number: 3 (lower is better) Translates to: DRHLQPRLPWNS*SFCLNLQYAGI Trigger: AATTCCAGCATATTGAAGGTTGAGGCAGAAGGATCAACTGTTCCAGGGCAGCCTGGGCTGCAGATGCCGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR GCA 72 bp | CGTAACCTGCAGTTAGTATCTGTAGCTGGGGCCATCTaGAGAGAACCGCAGGGGCTGGCAAAGAACTCATCT | + |
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Preference number: 3 (lower is better) Translates to: RNLQLVSVAGAI*REPQGLAKNSS Trigger: AGATGAGTTCTTTGCCAGCCCCTGCGGTTCTCTGCAGATGGCCCCAGCTACAGATACTAACTGCAGGTTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR CCA 72 bp | CGCAGGGGCTGGCAAAGAACTCATCTTGCTTGGGATTaGGGAATGGACAGTAATGGAGAGAAGCGGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: RRGWQRTHLAWD*GMDSNGEKRRR Trigger: TCTCCTCCGCTTCTCTCCATTACTGTCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR CCA 72 bp | GAGAACCGCAGGGGCTGGCAAAGAACTCATCTTGCTTaGGATTGGGGAATGGACAGTAATGGAGAGAAGCGG | + |
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Preference number: 3 (lower is better) Translates to: ENRRGWQRTHLA*DWGMDSNGEKR Trigger: CCGCTTCTCTCCATTACTGTCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCCTGCGGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
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| 3UTR CCA 72 bp | AAAGGTGAGCAAGATGGGGGAAGACCCTCTGCAGAATaGCAAATGGATATGCAGTTAGGGCTGCCCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: KGEQDGGRPSAE*QMDMQLGLPLG Trigger: TCCCAGGGGCAGCCCTAACTGCATATCCATTTGCCATTCTGCAGAGGGTCTTCCCCCATCTTGCTCACCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
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| 3UTR TCA 72 bp | CACAGACATACATCTTTTCTCAGGTGGACTTGGACCTaGCAGCTTGGGCAGGATTCCAAGCGACGGGATCAC | + |
|
Preference number: 3 (lower is better) Translates to: HRHTSFLRWTWT*QLGQDSKRRDH Trigger: GTGATCCCGTCGCTTGGAATCCTGCCCAAGCTGTCAGGTCCAAGTCCACCTGAGAAAAGATGTATGTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR GCA 72 bp | GTGGTAACAGGCTCAGGGCTCTACAAATCAAAGCTTTaGTTGCCCCACAGGGAGCCTGATAGGAAACAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VVTGSGLYKSKL*LPHREPDRKQA Trigger: TGCTTGTTTCCTATCAGGCTCCCTGTGGGGCAAGCAAAGCTTTGATTTGTAGAGCCCTGAGCCTGTTACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR CCA 72 bp | ATGCCTTGGGCCTGTGGAAATAACCAAGCCTTCCCCTaGTCCACTAAGGATGTTGACAAGAGTGTGCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: MPWACGNNQAFP*STKDVDKSVQK Trigger: TTTCTGCACACTCTTGTCAACATCCTTAGTGGACCAGGGGAAGGCTTGGTTATTTCCACAGGCCCAAGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGTAAAAGCACAGACCTAGGGATGCACTCCCTGCCTTTGGATCCCCACTCTCTGTGTCCATCTATGTaGCTTTTTCTCCTTCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CCKSTDLGMHSLPLDPHSLCPSM*LFLLLV Trigger: GACCAGAAGGAGAAAAAGCAACATAGATGGACACAG...AGAGTGGGGATCCAAAGGCAGGGAGTGCATCCCTAGGTCTGTGCTTTTACAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR TCA 72 bp | CCAGCTGTGTGCCTTTCCAGGACAACGAGATGCCCTTaGGTCGCTATATTAGCATTTGTTCAGGACTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: PAVCLSRTTRCP*VAILAFVQDYV Trigger: GACATAGTCCTGAACAAATGCTAATATAGCGACTCAAGGGCATCTCGTTGTCCTGGAAAGGCACACAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR CCA 72 bp | GAACAGTTGATCCTTCTGCCTCAACCTTCAATATGCTaGAATTACAGTCCTGAGCCACCGCTCCCATCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: EQLILLPQPSIC*NYSPEPPLPSH Trigger: ATGAGATGGGAGCGGTGGCTCAGGACTGTAATTCCAGCATATTGAAGGTTGAGGCAGAAGGATCAACTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGCTTCCCTATAGAGCTCCCTTTACCTAGATCAGCTAACCTCTCTCCTCATCGTAGGAGGAGGGGCTaGGTAAATGAAAGGAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: ACFPIELPLPRSANLSPHRRRRG*VNERNF Trigger: AAAATTCCTTTCATTTACCAAGCCCCTCCTCCTACG...ATGAGGAGAGAGGTTAGCTGATCTAGGTAAAGGGAGCTCTATAGGGAAGCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGACATTTTCTTTAATAGTATTAGCTGTGCAGGTGGGCCTCACTTTACACACTGGCAAAGAACTCATCTaGCTTGGGATTGGGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: ETFSLIVLAVQVGLTLHTGKELI*LGIGEW Trigger: CCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGCC...AGTGTGTAAAGTGAGGCCCACCTGCACAGCTAATACTATTAAAGAAAATGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| 3UTR TCA 72 bp | GCCTTTGGATCCCCACTCTACCATTTGCTAATTAGTTaGCCTTATGCAAACCAGAGCCTTGATTCCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: AFGSPLYHLLIS*PYANQSLDSSS Trigger: AGATGAGGAATCAAGGCTCTGGTTTGCATAAGGTCAACTAATTAGCAAATGGTAGAGTGGGGATCCAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR TCA 72 bp | GGGGAGCTAGTGAAGTCCAGGGTGAATGTAAATTGTTaGACTAACACAACTATGTCAAAGACAATGCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GELVKSRVNVNC*TNTTMSKTMPW Trigger: CCAAGGCATTGTCTTTGACATAGTTGTGTTAGTTCAACAATTTACATTCACCCTGGACTTCACTAGCTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR CCA 72 bp | TCTCATAGAAGGTGTGCTTTAAAAGAAAGAGGGTTGTaGGGAGCTAGTGAAGTCCAGGGTGAATGTAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: SHRRCALKERGL*GASEVQGECKL Trigger: CAATTTACATTCACCCTGGACTTCACTAGCTCCCCACAACCCTCTTTCTTTTAAAGCACACCTTCTATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR TCA 72 bp | ACAGGGAGCCTGATAGGAAACAAGCAGGTTGTACTTTaGGACATTTTCTTTAATAGTATTAGCTGTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TGSLIGNKQVVL*DIFFNSISCAG Trigger: ACCTGCACAGCTAATACTATTAAAGAAAATGTCTCAAAGTACAACCTGCTTGTTTCCTATCAGGCTCCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGCAGAGAACCGCAGGGGCTGGCAAAGAACTCATCTTGCTTGGGATTGGGGAGGCCTGCCTCACACTaGTGTTCTCCTTGGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ICREPQGLAKNSSCLGLGRPASH*CSPWRW Trigger: CCAGCGCCAAGGAGAACATCAGTGTGAGGCAGGCCT...CCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCCTGCGGTTCTCTGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR TCA 90 bp | TGTTGTAAAAGCACAGACCTAGGGATGCACTCCCTGCCTTTGGATCCCCACTCTAGGCCTGCCTCACACTaGTGTTCTCCTTGGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCKSTDLGMHSLPLDPHSRPASH*CSPWRW Trigger: CCAGCGCCAAGGAGAACATCAGTGTGAGGCAGGCCT...AGAGTGGGGATCCAAAGGCAGGGAGTGCATCCCTAGGTCTGTGCTTTTACAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR CAA 72 bp | GGACCGGCATCTGCAGCCCAGGCTGCCCTGGAACAGTaGATCCTTCTGCCTCAACCTTCAATATGCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GPASAAQAALEQ*ILLPQPSICWN Trigger: ATTCCAGCATATTGAAGGTTGAGGCAGAAGGATCAACTGTTCCAGGGCAGCCTGGGCTGCAGATGCCGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGCAGAGAACCGCAGGGGCTGGCAAAGAACTCATCTTGCTTGGGATTGGGGTATTTCCCACGAGAATaGCCTGTGCGTTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ICREPQGLAKNSSCLGLGYFPRE*PVRCPR Trigger: CCTGGGACAACGCACAGGTCATTCTCGTGGGAAATA...CCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCCTGCGGTTCTCTGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR CCA 90 bp | GACAGTAATGGAGAGAAGCGGAGGAGAAACAGGGCACGACATGGGGAAACAGGACCGGCCCTTCTCAGTTaGGACCACTCTTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSNGEKRRRNRARHGETGPALLS*DHSFLF Trigger: GAAGAGGAAAGAGTGGTCCCAACTGAGAAGGGCCGG...TCCTGTTTCCCCATGTCGTGCCCTGTTTCTCCTCCGCTTCTCTCCATTACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR TCA 90 bp | ATCTGCAGAGAACCGCAGGGGCTGGCAAAGAACTCATCTTGCTTGGGATTGGGGGGTCGGAGGCATCTTTaGTTCCAGTCTTACCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICREPQGLAKNSSCLGLGGRRHL*FQSYHQ Trigger: CTGATGGTAAGACTGGAATCAAAGATGCCTCCGACC...CCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCCTGCGGTTCTCTGCAGAT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGTAAAAGCACAGACCTAGGGATGCACTCCCTGCCTTTGGATCCCCACTCTCCGGCCCTTCTCAGTTaGGACCACTCTTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCKSTDLGMHSLPLDPHSPALLS*DHSFLF Trigger: GAAGAGGAAAGAGTGGTCCCAACTGAGAAGGGCCGG...AGAGTGGGGATCCAAAGGCAGGGAGTGCATCCCTAGGTCTGTGCTTTTACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| CDS-3UTR CCA 90 bp | ACTCATCTTGCTTGGGATTGGGGAATGGACAGTAATGGAGAGAAGCGGAGGAGACCGGCCCTTCTCAGTTaGGACCACTCTTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: THLAWDWGMDSNGEKRRRPALLS*DHSFLF Trigger: GAAGAGGAAAGAGTGGTCCCAACTGAGAAGGGCCGG...TCTCCTCCGCTTCTCTCCATTACTGTCCATTCCCCAATCCCAAGCAAGATGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR TCA 90 bp | CCGAGGAGTGTGCGTAGGAGGAGGGGCTTGGTAAATGAAAGGAATTTTATTATAAGGCCTGCCTCACACTaGTGTTCTCCTTGGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSVRRRRGLVNERNFIIRPASH*CSPWRW Trigger: CCAGCGCCAAGGAGAACATCAGTGTGAGGCAGGCCT...TATAATAAAATTCCTTTCATTTACCAAGCCCCTCCTCCTACGCACACTCCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCAAAGAACTCATCTTGCTTGGGATTGGGGAATGGACAGTAATGGAGAGACATCTTATCGCAGATaGCATCCACCAGCCGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GWQRTHLAWDWGMDSNGETSYRR*HPPAAR Trigger: TCGAGCGGCTGGTGGATGCCATCTGCGATAAGATGT...CTCTCCATTACTGTCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| 3UTR CAA 72 bp | GTAACAGGCTCAGGGCTCTACAAATCAAAGCTTTGCTaGCCCCACAGGGAGCCTGATAGGAAACAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTGSGLYKSKLC*PHREPDRKQAG Trigger: ACCTGCTTGTTTCCTATCAGGCTCCCTGTGGGGCAAGCAAAGCTTTGATTTGTAGAGCCCTGAGCCTGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| CDS-3UTR TCA 90 bp | GGGGCTGGCAAAGAACTCATCTTGCTTGGGATTGGGGAATGGACAGTAATGGAGAGACTGTCTTCACTTTaGAGTCGATACCCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAGKELILLGIGEWTVMERLSSL*SRYPQC Trigger: GCACTGTGGGTATCGACTTCAAAGTGAAGACAGTCT...CTCCATTACTGTCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| 3UTR CAA 72 bp | CATGTCCACAGAGCTGACTCTATTTGGCCCTTTCATTaGATCACTGGGCCTGATACCAGCTGTGTGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HVHRADSIWPFH*ITGPDTSCVPF Trigger: GAAAGGCACACAGCTGGTATCAGGCCCAGTGATCAAATGAAAGGGCCAAATAGAGTCAGCTCTGTGGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| CDS-3UTR CCA 90 bp | CTACATCGTGAGACAAAAGAGCAGGCTAGAAAGGTAAGAACCTGTGTCCATCTAACATCTTATCGCAGATaGCATCCACCAGCCGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LHRETKEQARKVRTCVHLTSYRR*HPPAAR Trigger: TCGAGCGGCTGGTGGATGCCATCTGCGATAAGATGT...TAGATGGACACAGGTTCTTACCTTTCTAGCCTGCTCTTTTGTCTCACGATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| 3UTR CAA 72 bp | CAGCACATGGTCGTAAGGAGCAATGGGCATTTTATTTaGCTTAAGCCCATGGGATCTGGTTGCCTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QHMVVRSNGHFI*LKPMGSGCLRN Trigger: GTTTCTGAGGCAACCAGATCCCATGGGCTTAAGCAAAATAAAATGCCCATTGCTCCTTACGACCATGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| CDS-3UTR TCA 90 bp | CCGAGGAGTGTGCGTAGGAGGAGGGGCTTGGTAAATGAAAGGAATTTTATTATAAGACTGTCTTCACTTTaGAGTCGATACCCACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PRSVRRRRGLVNERNFIIRLSSL*SRYPQC Trigger: GCACTGTGGGTATCGACTTCAAAGTGAAGACAGTCT...TATAATAAAATTCCTTTCATTTACCAAGCCCCTCCTCCTACGCACACTCCTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR TCA 90 bp | GAGACATTTTCTTTAATAGTATTAGCTGTGCAGGTGGGCCTCACTTTACACACTTATTTCCCACGAGAATaGCCTGTGCGTTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETFSLIVLAVQVGLTLHTYFPRE*PVRCPR Trigger: CCTGGGACAACGCACAGGTCATTCTCGTGGGAAATA...AGTGTGTAAAGTGAGGCCCACCTGCACAGCTAATACTATTAAAGAAAATGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR TCA 90 bp | TTGAACCTTCTTCATAAGAGGGAGTTTTCTGTTGTAAAAGGAGTGTTCACCCACTATTTCCCACGAGAATaGCCTGTGCGTTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNLLHKREFSVVKGVFTHYFPRE*PVRCPR Trigger: CCTGGGACAACGCACAGGTCATTCTCGTGGGAAATA...GTGGGTGAACACTCCTTTTACAACAGAAAACTCCCTCTTATGAAGAAGGTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR GCA 90 bp | TCTATCTTGAACCTTCTTCATAAGAGGGAGTTTTCTGTTGTAAAAGGAGTGTTCCATACCAAGCTGTTCTaGCAGGAGCCGGCCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SILNLLHKREFSVVKGVFHTKLF*QEPALL Trigger: GAGAAGGGCCGGCTCCTGGCAGAACAGCTTGGTATG...GAACACTCCTTTTACAACAGAAAACTCCCTCTTATGAAGAAGGTTCAAGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106651.9 |
||
| 3UTR CAA 72 bp | GAAATAACCAAGCCTTCCCCTGGTCCACTAAGGATGTaGACAAGAGTGTGCAGAAAATACCAACCACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EITKPSPGPLRM*TRVCRKYQPQL Trigger: AAGCTGTGGTTGGTATTTTCTGCACACTCTTGTCAACATCCTTAGTGGACCAGGGGAAGGCTTGGTTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| CDS-3UTR TCA 90 bp | GAGACATTTTCTTTAATAGTATTAGCTGTGCAGGTGGGCCTCACTTTACACACTGGTCGGAGGCATCTTTaGTTCCAGTCTTACCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETFSLIVLAVQVGLTLHTGRRHL*FQSYHQ Trigger: CTGATGGTAAGACTGGAATCAAAGATGCCTCCGACC...AGTGTGTAAAGTGAGGCCCACCTGCACAGCTAATACTATTAAAGAAAATGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| 3UTR CAA 72 bp | CCATCTCATAGAAGGTGTGCTTTAAAAGAAAGAGGGTaGTGGGGAGCTAGTGAAGTCCAGGGTGAATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSHRRCALKERG*WGASEVQGECK Trigger: TTTACATTCACCCTGGACTTCACTAGCTCCCCACAACCCTCTTTCTTTTAAAGCACACCTTCTATGAGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| CDS-3UTR TCA 90 bp | TCTATCTTGAACCTTCTTCATAAGAGGGAGTTTTCTGTTGTAAAAGGAGTGTTCGGTCGGAGGCATCTTTaGTTCCAGTCTTACCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SILNLLHKREFSVVKGVFGRRHL*FQSYHQ Trigger: CTGATGGTAAGACTGGAATCAAAGATGCCTCCGACC...GAACACTCCTTTTACAACAGAAAACTCCCTCTTATGAAGAAGGTTCAAGATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| 3UTR CAA 72 bp | TTTAAGGGCAGAAAAGATTCTTTCCAAGTCTCTATCTaGAACCTTCTTCATAAGAGGGAGTTTTCTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FKGRKDSFQVSI*NLLHKREFSVV Trigger: TACAACAGAAAACTCCCTCTTATGAAGAAGGTTCAAGATAGAGACTTGGAAAGAATCTTTTCTGCCCTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR CAA 90 bp | GAGAACCGCAGGGGCTGGCAAAGAACTCATCTTGCTTGGGATTGGGGAATGGACTTCCCGACGCTGCTGTaGCCAATGATGAGCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ENRRGWQRTHLAWDWGMDFPTLL*PMMSSL Trigger: CAAACTGCTCATCATTGGCAACAGCAGCGTCGGGAA...GTCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCCTGCGGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR CAA 90 bp | ATCTGCAGAGAACCGCAGGGGCTGGCAAAGAACTCATCTTGCTTGGGATTGGGGTTCCCGACGCTGCTGTaGCCAATGATGAGCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ICREPQGLAKNSSCLGLGFPTLL*PMMSSL Trigger: CAAACTGCTCATCATTGGCAACAGCAGCGTCGGGAA...CCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCCCCTGCGGTTCTCTGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR CAA 90 bp | GACAGTAATGGAGAGAAGCGGAGGAGAAACAGGGCACGACATGGGGAAACAGGACAGTCCTGGACAGCATaGAAGGACTCCTCGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DSNGEKRRRNRARHGETGQSWTA*KDSSLV Trigger: CACCAACGAGGAGTCCTTCAATGCTGTCCAGGACTG...TCCTGTTTCCCCATGTCGTGCCCTGTTTCTCCTCCGCTTCTCTCCATTACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR CAA 90 bp | GGCTGGCAAAGAACTCATCTTGCTTGGGATTGGGGAATGGACAGTAATGGAGAGTTCCCGACGCTGCTGTaGCCAATGATGAGCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GWQRTHLAWDWGMDSNGEFPTLL*PMMSSL Trigger: CAAACTGCTCATCATTGGCAACAGCAGCGTCGGGAA...CTCTCCATTACTGTCCATTCCCCAATCCCAAGCAAGATGAGTTCTTTGCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS-3UTR CAA 90 bp | ATGGGCATTTTATTTTGCTTAAGCCCATGGGATCTGGTTGCCTCAGAAACTAATCAGTCCTGGACAGCATaGAAGGACTCCTCGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MGILFCLSPWDLVASETNQSWTA*KDSSLV Trigger: CACCAACGAGGAGTCCTTCAATGCTGTCCAGGACTG...ATTAGTTTCTGAGGCAACCAGATCCCATGGGCTTAAGCAAAATAAAATGCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106650.9 |
||
| CDS CCA 72 bp | GCAGCAGAGGTGGGGTGTCTGAGAGCCGCGTCGTCTTaGAGGCGCCTAGCACGGAGGGGTCTGTGTCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: AAEVGCLRAASS*RRLARRGLCPS Trigger: CGATGGACACAGACCCCTCCGTGCTAGGCGCCTCCAAGACGACGCGGCTCTCAGACACCCCACCTCTGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS CAA 72 bp | TGCAGCAGAGGTGGGGTGTCTGAGAGCCGCGTCGTCTaGGAGGCGCCTAGCACGGAGGGGTCTGTGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: CSRGGVSESRVV*EAPSTEGSVSI Trigger: GATGGACACAGACCCCTCCGTGCTAGGCGCCTCCAAGACGACGCGGCTCTCAGACACCCCACCTCTGCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||
| CDS GCA 72 bp | GGCGCTGGCTTCAAAGAAGTCAAACCCAAGCTGTTCTaGCAGGAGCCGGCCCTTCTCAGTTGGGACCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: GAGFKEVKPKLF*QEPALLSWDHS Trigger: AGAGTGGTCCCAACTGAGAAGGGCCGGCTCCTGGCAGAACAGCTTGGGTTTGACTTCTTTGAAGCCAGCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 |
||
| CDS CCA 72 bp | GGTCTGTGTCCATCGAGTCAGACATCTTATCGCAGATaGCATCCACCAGCCGCTCGAAGGCCTGCCTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GLCPSSQTSYRR*HPPAARRPASH Trigger: GTGTGAGGCAGGCCTTCGAGCGGCTGGTGGATGCCATCTGCGATAAGATGTCTGACTCGATGGACACAGACC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003502.4 ENSMUST00000106650.9 ENSMUST00000106651.9 |
||