Pregenerated sensors for RAB37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020732Ensembl transcript IDs: ENSMUST00000021076.6, ENSMUST00000067754.11
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCTGCCCACTGAGCCCCCAGCTTCTCCTAGTTGGTGTGGCAGTTaGAGTACTGCATCCCCAAGGGTCTCTGGGCCTCCTCTTAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GLPTEPPASPSWCGS*STASPRVSGPPLSP Trigger: GGGGCTAAGAGGAGGCCCAGAGACCCTTGGGGATGCAGTACTCCAACTGCCACACCAACTAGGAGAAGCTGGGGGCTCAGTGGGCAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR TCA 90 bp | TTCCAGACTCTGACCTCTGGTTGTCTAGGAACCCAGGTGGAAAGTTaGCAAGAGAGGTTCCATGGGAGAGCGGGGCATCCCCTGGGATGT | + |
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Preference number: 1 (lower is better) Translates to: FQTLTSGCLGTQVES*QERFHGRAGHPLGC Trigger: ACATCCCAGGGGATGCCCCGCTCTCCCATGGAACCTCTCTTGTCAACTTTCCACCTGGGTTCCTAGACAACCAGAGGTCAGAGTCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 90 bp | GGAGAGAGAGAGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTaGCCTATGGCTTTGTTCAGTTCTGCCTCCCACCCATTCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: GERERASKLGLSGKN*PMALFSSASHPFQE Trigger: CTCCTGGAATGGGTGGGAGGCAGAACTGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCTCTCTCTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 90 bp | GAGAGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTGGCCTATaGCTTTGTTCAGTTCTGCCTCCCACCCATTCCAGGAGCCAACAA | + |
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Preference number: 1 (lower is better) Translates to: ERERASWGLVGKTGL*LCSVLPPTHSRSQQ Trigger: TTGTTGGCTCCTGGAATGGGTGGGAGGCAGAACTGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR GCA 90 bp | ATCAGAGCTTTGGGAGACACATGGCCTTGGGCCTACAGGGCTTGTTaGCCCTCTCCGTACCCCAGACTTGCTCATACTTCCTTGTTTTGT | + |
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Preference number: 1 (lower is better) Translates to: IRALGDTWPWAYRAC*PSPYPRLAHTSLFC Trigger: ACAAAACAAGGAAGTATGAGCAAGTCTGGGGTACGGAGAGGGGCAACAAGCCCTGTAGGCCCAAGGCCATGTGTCTCCCAAAGCTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR GCA 90 bp | GACAATCTCCATGTTTATCTTGCCCAAGGCTTTGGGCTAGCTCCCTaGATGAGGGCCCTTATTATCTTTCTGGGAGCTGGGAGAGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: DNLHVYLAQGFGLAP*MRALIIFLGAGRGE Trigger: TTCTCCTCTCCCAGCTCCCAGAAAGATAATAAGGGCCCTCATGCAGGGAGCTAGCCCAAAGCCTTGGGCAAGATAAACATGGAGATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR GCA 90 bp | CACCCATTCCAGGAGCCAACAAGTTCTTTATCTGGCTCTGACCTCTaGCTTAAATATCCGTGGTGCTGTACACCTTGTCTCGGGATTGGG | + |
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Preference number: 1 (lower is better) Translates to: HPFQEPTSSLSGSDL*LKYPWCCTPCLGIG Trigger: CCCAATCCCGAGACAAGGTGTACAGCACCACGGATATTTAAGGCAGAGGTCAGAGCCAGATAAAGAACTTGTTGGCTCCTGGAATGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 90 bp | CTGAAGTTAAAGAGAGAGAGGGAGAGAGAGAGAGAGCGAGCAAGCTaGGGCTTAGTGGGAAAAACTGGCCTATGGCTTTGTTCAGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LKLKRERERERERAS*GLVGKTGLWLCSVL Trigger: CAGAACTGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCTCTCTCTCTCCCTCTCTCTCTTTAACTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CCA 90 bp | GCCCCACTGCTCGTGTGTGCTGAAGAAAAAGCCCGTGCACGCTTCCAGAAGGAGGGGAGAGGAGAAGTCTaGGGTCTCCTTCACCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: APLLVCAEEKARARFQKEGRGEV*GLLHPL Trigger: AAGGGGGTGAAGGAGACCCCAGACTTCTCCTCTCCC...CTCCTTCTGGAAGCGTGCACGGGCTTTTTCTTCAGCACACACGAGCAGTGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CAA 90 bp | TTTCCAGACTCTGACCTCTGGTTGTCTAGGAACCCAGGTGGAAAGTaGACAAGAGAGGTTCCATGGGAGAGCGGGGCATCCCCTGGGATG | + |
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Preference number: 2 (lower is better) Translates to: FPDSDLWLSRNPGGK*TREVPWESGASPGM Trigger: CATCCCAGGGGATGCCCCGCTCTCCCATGGAACCTCTCTTGTCAACTTTCCACCTGGGTTCCTAGACAACCAGAGGTCAGAGTCTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CAA 90 bp | AGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTGGCCTATGGCTTaGTTCAGTTCTGCCTCCCACCCATTCCAGGAGCCAACAAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RASKLGLSGKNWPMA*FSSASHPFQEPTSS Trigger: AGAACTTGTTGGCTCCTGGAATGGGTGGGAGGCAGAACTGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR TCA 90 bp | AAAAACTGGCCTATGGCTTTGTTCAGTTCTGCCTCCCACCCATTCCAGGAGCCAACCCAGGTGGAAAGTTaGCAAGAGAGGTTCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: KNWPMALFSSASHPFQEPTQVES*QERFHG Trigger: CCCATGGAACCTCTCTTGTCAACTTTCCACCTGGGT...TGGCTCCTGGAATGGGTGGGAGGCAGAACTGAACAAAGCCATAGGCCAGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGAGGCCCAGCCTTTTAGAACTTAGTCCCAGAAAGCAAAGGACCACCGAGCCAGCTTCTCCTAGTTaGTGTGGCAGTTGGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: GERPSLLELSPRKQRTTEPASPS*CGSWST Trigger: AGTACTCCAACTGCCACACCAACTAGGAGAAGCTGG...CTCGGTGGTCCTTTGCTTTCTGGGACTAAGTTCTAAAAGGCTGGGCCTCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTTCAGTTCTGCCTCCCACCCATTCCAGGAGCCAACAAGTTCTTTATCTGTGGCAGTTGGAGTACTaGATCCCCAAGGGTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LCSVLPPTHSRSQQVLYLWQLEY*IPKGLW Trigger: CCAGAGACCCTTGGGGATGCAGTACTCCAACTGCCA...CAGATAAAGAACTTGTTGGCTCCTGGAATGGGTGGGAGGCAGAACTGAACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTGGCCTATGGCTTTGTTCATTTGGGCTAGCTCCCTaGATGAGGGCCCTTATTATC | + |
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Preference number: 2 (lower is better) Translates to: RERASWGLVGKTGLWLCSFGLAP*MRALII Trigger: GATAATAAGGGCCCTCATGCAGGGAGCTAGCCCAAA...TGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR TCA 90 bp | GTTGGGAAAGCCAGAGGTAGCCAAGCAGACTCAGTACCTAGTAATTGCTATTCCCTTAGTGAGGATTGGTaGTGGGGTCACAACCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: VGKARGSQADSVPSNCYSLSEDW*WGHNQL Trigger: GAGCTGGTTGTGACCCCATCACCAATCCTCACTAAG...GGAATAGCAATTACTAGGTACTGAGTCTGCTTGGCTACCTCTGGCTTTCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CCA 90 bp | CTATATAGATGTAGTAAAGCTTCCTTTGGTCATGGATCTGCACACCTCCGAGTGGGGAGAGGAGAAGTCTaGGGTCTCCTTCACCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LYRCSKASFGHGSAHLRVGRGEV*GLLHPL Trigger: AAGGGGGTGAAGGAGACCCCAGACTTCTCCTCTCCC...CACTCGGAGGTGTGCAGATCCATGACCAAAGGAAGCTTTACTACATCTATATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CCA 90 bp | CTATATAGATGTAGTAAAGCTTCCTTTGGTCATGGATCTGCACACCTCCGAGTGGCTTTGGGAGACACATaGCCTTGGGCCTACAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LYRCSKASFGHGSAHLRVALGDT*PWAYRA Trigger: AGCCCTGTAGGCCCAAGGCCATGTGTCTCCCAAAGC...CACTCGGAGGTGTGCAGATCCATGACCAAAGGAAGCTTTACTACATCTATATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR TCA 90 bp | CTATATAGATGTAGTAAAGCTTCCTTTGGTCATGGATCTGCACACCTCCGAGTGACTGCTCGTGTGTGCTaGAGAAAAAGCCCGTGCACG | + |
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Preference number: 2 (lower is better) Translates to: LYRCSKASFGHGSAHLRVTARVC*RKSPCT Trigger: CGTGCACGGGCTTTTTCTTCAGCACACACGAGCAGT...CACTCGGAGGTGTGCAGATCCATGACCAAAGGAAGCTTTACTACATCTATATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR GCA 90 bp | CATTCCAGGAGCCAACAAGTTCTTTATCTGGCTCTGACCTCTGCCTTAAATATCTGGCAGTTGGAGTACTaGATCCCCAAGGGTCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: HSRSQQVLYLALTSALNIWQLEY*IPKGLW Trigger: CCAGAGACCCTTGGGGATGCAGTACTCCAACTGCCA...GATATTTAAGGCAGAGGTCAGAGCCAGATAAAGAACTTGTTGGCTCCTGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR GCA 90 bp | AATATAGTAACCTCAGATATGTGTAATGCATACTTTCTTGGAGCCTCACTCGCTGCCTACAGGGCTTGTTaGCCCTCTCCGTACCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: NIVTSDMCNAYFLGASLAAYRAC*PSPYPR Trigger: TCTGGGGTACGGAGAGGGGCAACAAGCCCTGTAGGC...AGCGAGTGAGGCTCCAAGAAAGTATGCATTACACATATCTGAGGTTACTATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR GCA 90 bp | CTATATAGATGTAGTAAAGCTTCCTTTGGTCATGGATCTGCACACCTCCGAGTGTTTGGGCTAGCTCCCTaGATGAGGGCCCTTATTATC | + |
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Preference number: 2 (lower is better) Translates to: LYRCSKASFGHGSAHLRVFGLAP*MRALII Trigger: GATAATAAGGGCCCTCATGCAGGGAGCTAGCCCAAA...CACTCGGAGGTGTGCAGATCCATGACCAAAGGAAGCTTTACTACATCTATATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CCA 90 bp | TTGCTATTCCTCTTAGGACAATCTCCATGTTTATCTTGCCCAAGGCTTTGGGCTCCAGCTTCTCCTAGTTaGTGTGGCAGTTGGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: LLFLLGQSPCLSCPRLWAPASPS*CGSWST Trigger: AGTACTCCAACTGCCACACCAACTAGGAGAAGCTGG...AGCCCAAAGCCTTGGGCAAGATAAACATGGAGATTGTCCTAAGAGGAATAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CCA 90 bp | CATTCCAGGAGCCAACAAGTTCTTTATCTGGCTCTGACCTCTGCCTTAAATATCCCCTTATTATCTTTCTaGGAGCTGGGAGAGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: HSRSQQVLYLALTSALNIPLLSF*ELGEEK Trigger: CTTCTCCTCTCCCAGCTCCCAGAAAGATAATAAGGG...GATATTTAAGGCAGAGGTCAGAGCCAGATAAAGAACTTGTTGGCTCCTGGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR TCA 90 bp | AATATAGTAACCTCAGATATGTGTAATGCATACTTTCTTGGAGCCTCACTCGCTCTTAGTGAGGATTGGTaGTGGGGTCACAACCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: NIVTSDMCNAYFLGASLALSEDW*WGHNQL Trigger: GAGCTGGTTGTGACCCCATCACCAATCCTCACTAAG...AGCGAGTGAGGCTCCAAGAAAGTATGCATTACACATATCTGAGGTTACTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CCA 90 bp | AATATAGTAACCTCAGATATGTGTAATGCATACTTTCTTGGAGCCTCACTCGCTTATCTTTCTGGGAGCTaGGAGAGGAGAAGTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: NIVTSDMCNAYFLGASLAYLSGS*ERRSLG Trigger: CCCCAGACTTCTCCTCTCCCAGCTCCCAGAAAGATA...AGCGAGTGAGGCTCCAAGAAAGTATGCATTACACATATCTGAGGTTACTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 72 bp | ACTGAGCCCCCAGCTTCTCCTAGTTGGTGTGGCAGTTaGAGTACTGCATCCCCAAGGGTCTCTGGGCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: TEPPASPSWCGS*STASPRVSGPP Trigger: AGGAGGCCCAGAGACCCTTGGGGATGCAGTACTCCAACTGCCACACCAACTAGGAGAAGCTGGGGGCTCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 72 bp | CCTTCTAAGGGTCAGATCAGAGCTTTGGGAGACACATaGCCTTGGGCCTACAGGGCTTGTTGCCCCTCTCCG | + |
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Preference number: 3 (lower is better) Translates to: PSKGQIRALGDT*PWAYRACCPSP Trigger: CGGAGAGGGGCAACAAGCCCTGTAGGCCCAAGGCCATGTGTCTCCCAAAGCTCTGATCTGACCCTTAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR TCA 72 bp | CTGACCTCTGGTTGTCTAGGAACCCAGGTGGAAAGTTaGCAAGAGAGGTTCCATGGGAGAGCGGGGCATCCC | + |
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Preference number: 3 (lower is better) Translates to: LTSGCLGTQVES*QERFHGRAGHP Trigger: GGGATGCCCCGCTCTCCCATGGAACCTCTCTTGTCAACTTTCCACCTGGGTTCCTAGACAACCAGAGGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 72 bp | GACAAGAGAGGTTCCATGGGAGAGCGGGGCATCCCCTaGGATGTGAGGTCCAGAGATCAGGAAGGAGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: DKRGSMGERGIP*DVRSRDQEGVF Trigger: AAACACTCCTTCCTGATCTCTGGACCTCACATCCCAGGGGATGCCCCGCTCTCCCATGGAACCTCTCTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR TCA 72 bp | AGCCCCAGAAGAGAACCCGGAGCCCAGGCTCCTCCCTaGTCTTCCTATGAGAGGTCACAGAGAGTTTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: SPRREPGAQAPP*SSYERSQRVSL Trigger: TAAGGAAACTCTCTGTGACCTCTCATAGGAAGATCAGGGAGGAGCCTGGGCTCCGGGTTCTCTTCTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 72 bp | CGAGCAAGCTGGGGCTTAGTGGGAAAAACTGGCCTATaGCTTTGTTCAGTTCTGCCTCCCACCCATTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: RASWGLVGKTGL*LCSVLPPTHSR Trigger: CCTGGAATGGGTGGGAGGCAGAACTGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 72 bp | GAGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTaGCCTATGGCTTTGTTCAGTTCTGCCTCCCACCCA | + |
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Preference number: 3 (lower is better) Translates to: ERASKLGLSGKN*PMALFSSASHP Trigger: TGGGTGGGAGGCAGAACTGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGAGGGAGAGAGAGAGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTCACCTTGTCTCGGGATaGGGAGGGAGGGGAAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: RERERERERASWGLVGKTHLVSG*GGRGSF Trigger: AAAACTTCCCCTCCCTCCCAATCCCGAGACAAGGTG...AGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCTCTCTCTCTCCCTCTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR GCA 72 bp | TTATCTGGCTCTGACCTCTGCCTTAAATATCCGTGGTaGTGTACACCTTGTCTCGGGATTGGGAGGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LSGSDLCLKYPW*CTPCLGIGREG Trigger: CCCCTCCCTCCCAATCCCGAGACAAGGTGTACAGCACCACGGATATTTAAGGCAGAGGTCAGAGCCAGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CAA 90 bp | AAAAACTGGCCTATGGCTTTGTTCAGTTCTGCCTCCCACCCATTCCAGGAGCCACACCTTGTCTCGGGATaGGGAGGGAGGGGAAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: KNWPMALFSSASHPFQEPHLVSG*GGRGSF Trigger: AAAACTTCCCCTCCCTCCCAATCCCGAGACAAGGTG...TGGCTCCTGGAATGGGTGGGAGGCAGAACTGAACAAAGCCATAGGCCAGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR GCA 72 bp | CATGTTTATCTTGCCCAAGGCTTTGGGCTAGCTCCCTaGATGAGGGCCCTTATTATCTTTCTGGGAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: HVYLAQGFGLAP*MRALIIFLGAG Trigger: CCCAGCTCCCAGAAAGATAATAAGGGCCCTCATGCAGGGAGCTAGCCCAAAGCCTTGGGCAAGATAAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 72 bp | AAGAGAGAGAGGGAGAGAGAGAGAGAGCGAGCAAGCTaGGGCTTAGTGGGAAAAACTGGCCTATGGCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: KRERERERERAS*GLVGKTGLWLC Trigger: ACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCTCTCTCTCTCCCTCTCTCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CAA 90 bp | CTTTGTTCAGTTCTGCCTCCCACCCATTCCAGGAGCCAACAAGTTCTTTATCTGCTTCCAGAAGGAGGGTaGGGAAAGCCAGAGGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: LCSVLPPTHSRSQQVLYLLPEGG*GKPEVA Trigger: GGCTACCTCTGGCTTTCCCAACCCTCCTTCTGGAAG...CAGATAAAGAACTTGTTGGCTCCTGGAATGGGTGGGAGGCAGAACTGAACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 72 bp | TCTTTATCTGGCTCTGACCTCTGCCTTAAATATCCGTaGTGCTGTACACCTTGTCTCGGGATTGGGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SLSGSDLCLKYP*CCTPCLGIGRE Trigger: CTCCCTCCCAATCCCGAGACAAGGTGTACAGCACCACGGATATTTAAGGCAGAGGTCAGAGCCAGATAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CAA 90 bp | CTATATAGATGTAGTAAAGCTTCCTTTGGTCATGGATCTGCACACCTCCGAGTGAACTGGCCTATGGCTTaGTTCAGTTCTGCCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: LYRCSKASFGHGSAHLRVNWPMA*FSSASH Trigger: GTGGGAGGCAGAACTGAACAAAGCCATAGGCCAGTT...CACTCGGAGGTGTGCAGATCCATGACCAAAGGAAGCTTTACTACATCTATATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR CCA 72 bp | TTAGGACAATCTCCATGTTTATCTTGCCCAAGGCTTTaGGCTAGCTCCCTGCATGAGGGCCCTTATTATCTT | + |
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Preference number: 3 (lower is better) Translates to: LGQSPCLSCPRL*ASSLHEGPYYL Trigger: AAGATAATAAGGGCCCTCATGCAGGGAGCTAGCCCAAAGCCTTGGGCAAGATAAACATGGAGATTGTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CAA 90 bp | AATATAGTAACCTCAGATATGTGTAATGCATACTTTCTTGGAGCCTCACTCGCTGGTCAGATCAGAGCTTaGGGAGACACATGGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: NIVTSDMCNAYFLGASLAGQIRA*GDTWPW Trigger: CCAAGGCCATGTGTCTCCCAAAGCTCTGATCTGACC...AGCGAGTGAGGCTCCAAGAAAGTATGCATTACACATATCTGAGGTTACTATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| 3UTR-3UTR CAA 90 bp | AATATAGTAACCTCAGATATGTGTAATGCATACTTTCTTGGAGCCTCACTCGCTAACCCAGGTGGAAAGTaGACAAGAGAGGTTCCATGG | + |
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Preference number: 3 (lower is better) Translates to: NIVTSDMCNAYFLGASLANPGGK*TREVPW Trigger: CCATGGAACCTCTCTTGTCAACTTTCCACCTGGGTT...AGCGAGTGAGGCTCCAAGAAAGTATGCATTACACATATCTGAGGTTACTATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| CDS-3UTR TCA 90 bp | CCCCACTGCTCGTGTGTGCTGAAGAAAAAGCCCGTGCACGCTTCCAGAAGGAGGTGCCGACGGTGGCTATaGAGGTTCCGGACAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHCSCVLKKKPVHASRRRCRRWL*RFRTGR Trigger: CCTTCCTGTCCGGAACCTTCATAGCCACCGTCGGCA...CCTCCTTCTGGAAGCGTGCACGGGCTTTTTCTTCAGCACACACGAGCAGTGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
||
| CDS-3UTR TCA 90 bp | GCCCCACTGCTCGTGTGTGCTGAAGAAAAAGCCCGTGCACGCTTCCAGAAGGAGAGAAGGAGCCGGGGATaGACTTCCCCTGGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: APLLVCAEEKARARFQKERRSRG*TSPGQT Trigger: AGTTTGACCAGGGGAAGTTCATCCCCGGCTCCTTCT...CTCCTTCTGGAAGCGTGCACGGGCTTTTTCTTCAGCACACACGAGCAGTGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
||
| CDS-3UTR TCA 90 bp | CCCCACTGCTCGTGTGTGCTGAAGAAAAAGCCCGTGCACGCTTCCAGAAGGAGGGGAAGGCCCCGTCTTTaGATTGGATCAGGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHCSCVLKKKPVHASRRRGRPRL*IGSGNR Trigger: CCTGTTTCCTGATCCAATTCAAAGACGGGGCCTTCC...CCTCCTTCTGGAAGCGTGCACGGGCTTTTTCTTCAGCACACACGAGCAGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
||
| CDS-3UTR TCA 90 bp | CCACTGCTCGTGTGTGCTGAAGAAAAAGCCCGTGCACGCTTCCAGAAGGAGGGTCTCTGGGCATACTCATaGATCTCTGTGAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLVCAEEKARARFQKEGLWAYS*ISVSQA Trigger: GGCCTGGCTCACAGAGATTCATGAGTATGCCCAGAG...ACCCTCCTTCTGGAAGCGTGCACGGGCTTTTTCTTCAGCACACACGAGCAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGGGAGAGAGAGAGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTGATACCCACGGTGGCTaGGAAGGAGCCGGGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERASWGLVGKTDTHGG*EGAGDE Trigger: TTCATCCCCGGCTCCTTCTCAGCCACCGTGGGTATC...AGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCTCTCTCTCTCCCTCTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCTAGTTGGTGTGGCAGTTGGAGTACTGCATCCCCAAGGGTCTCTGGGCCAAAGGAGCAGCAGCTaGAGCGCTTCTTCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLLVGVAVGVLHPQGSLGQRSSS*SASSGT Trigger: AGTCCCAGAAGAAGCGCTCCAGCTGCTGCTCCTTTG...GCCCAGAGACCCTTGGGGATGCAGTACTCCAACTGCCACACCAACTAGGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTGTGGCAGTTGGAGTACTGCATCCCCAAGGGTCTCTGGGCCTCCTCTTTCTGAAGCTTCACCCTaGCACCATCCACTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SWCGSWSTASPRVSGPPLSEASP*HHPLSP Trigger: TGGTGACAGTGGATGGTGCCAGGGTGAAGCTTCAGA...AAGAGGAGGCCCAGAGACCCTTGGGGATGCAGTACTCCAACTGCCACACCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| 3UTR CAA 72 bp | TCTGACCTCTGGTTGTCTAGGAACCCAGGTGGAAAGTaGACAAGAGAGGTTCCATGGGAGAGCGGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SDLWLSRNPGGK*TREVPWESGAS Trigger: GGATGCCCCGCTCTCCCATGGAACCTCTCTTGTCAACTTTCCACCTGGGTTCCTAGACAACCAGAGGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| 3UTR CAA 72 bp | CCGAGTGTCCTTCCTTCTAAGGGTCAGATCAGAGCTTaGGGAGACACATGGCCTTGGGCCTACAGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSVLPSKGQIRA*GDTWPWAYRAC Trigger: ACAAGCCCTGTAGGCCCAAGGCCATGTGTCTCCCAAAGCTCTGATCTGACCCTTAGAAGGAAGGACACTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR TCA 90 bp | CAAGTTCTTTATCTGGCTCTGACCTCTGCCTTAAATATCCGTGGTGCTGTACACGATCGTAGTTCGGGCTaGAGGGCGGGGAGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVLYLALTSALNIRGAVHDRSSG*RAGSAQ Trigger: CTGAGCGCTCCCCGCCCTTCAGCCCGAACTACGATC...GTGTACAGCACCACGGATATTTAAGGCAGAGGTCAGAGCCAGATAAAGAACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
||
| CDS-3UTR TCA 90 bp | GGAGAGAGGCCCAGCCTTTTAGAACTTAGTCCCAGAAAGCAAAGGACCACCGAGCTCTGGGCATACTCATaGATCTCTGTGAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GERPSLLELSPRKQRTTELWAYS*ISVSQA Trigger: GGCCTGGCTCACAGAGATTCATGAGTATGCCCAGAG...CTCGGTGGTCCTTTGCTTTCTGGGACTAAGTTCTAAAAGGCTGGGCCTCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | CCCCACTGCTCGTGTGTGCTGAAGAAAAAGCCCGTGCACGCTTCCAGAAGGAGGGAACACCATATTCCCTaGCCAGTGTCTCTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHCSCVLKKKPVHASRRREHHIP*PVSLHL Trigger: AAGATGGAGAGACACTGGCCAGGGAATATGGTGTTC...CCTCCTTCTGGAAGCGTGCACGGGCTTTTTCTTCAGCACACACGAGCAGTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| 3UTR CAA 72 bp | AAGCTGGGGCTTAGTGGGAAAAACTGGCCTATGGCTTaGTTCAGTTCTGCCTCCCACCCATTCCAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLGLSGKNWPMA*FSSASHPFQEP Trigger: TGGCTCCTGGAATGGGTGGGAGGCAGAACTGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | CTTTGTTCAGTTCTGCCTCCCACCCATTCCAGGAGCCAACAAGTTCTTTATCTGCTCGGATCTGGAAGCTaGGCTCATCAGGCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCSVLPPTHSRSQQVLYLLGSGS*AHQAAS Trigger: GGAGGCAGCCTGATGAGCCCAGCTTCCAGATCCGAG...CAGATAAAGAACTTGTTGGCTCCTGGAATGGGTGGGAGGCAGAACTGAACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR TCA 90 bp | CAAGTTCTTTATCTGGCTCTGACCTCTGCCTTAAATATCCGTGGTGCTGTACACGCAGTGTCCCAGATCTaGAGCTTCACCCTGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QVLYLALTSALNIRGAVHAVSQI*SFTLAP Trigger: TGGTGCCAGGGTGAAGCTTCAGATCTGGGACACTGC...GTGTACAGCACCACGGATATTTAAGGCAGAGGTCAGAGCCAGATAAAGAACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | CTATATAGATGTAGTAAAGCTTCCTTTGGTCATGGATCTGCACACCTCCGAGTGCTCGGATCTGGAAGCTaGGCTCATCAGGCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYRCSKASFGHGSAHLRVLGSGS*AHQAAS Trigger: GGAGGCAGCCTGATGAGCCCAGCTTCCAGATCCGAG...CACTCGGAGGTGTGCAGATCCATGACCAAAGGAAGCTTTACTACATCTATATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR TCA 90 bp | AGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTGGCCTATGGCTTTGTTCATTCCCCTGGTCAAACTaGACCAGTAGAGATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RERASWGLVGKTGLWLCSFPWSN*TSRDVF Trigger: GAAGACATCTCTACTGGTTCAGTTTGACCAGGGGAA...TGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | AGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTGGCCTATGGCTTTGTTCAGAACACCATATTCCCTaGCCAGTGTCTCTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RERASWGLVGKTGLWLCSEHHIP*PVSLHL Trigger: AAGATGGAGAGACACTGGCCAGGGAATATGGTGTTC...TGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | GGAGAGAGGCCCAGCCTTTTAGAACTTAGTCCCAGAAAGCAAAGGACCACCGAGGGTATTTCAGTTCCTTaGCAATTGCCAGAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GERPSLLELSPRKQRTTEGISVP*QLPERP Trigger: TGGCCTTTCTGGCAATTGCCAAGGAACTGAAATACC...CTCGGTGGTCCTTTGCTTTCTGGGACTAAGTTCTAAAAGGCTGGGCCTCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| 3UTR CAA 72 bp | CGCTGCCCAACCTATATAGATGTAGTAAAGCTTCCTTaGGTCATGGATCTGCACACCTCCGAGTGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCPTYIDVVKLP*VMDLHTSECPS Trigger: GGAAGGACACTCGGAGGTGTGCAGATCCATGACCAAAGGAAGCTTTACTACATCTATATAGGTTGGGCAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | TTGCTATTCCTCTTAGGACAATCTCCATGTTTATCTTGCCCAAGGCTTTGGGCTCAAAGGAGCAGCAGCTaGAGCGCTTCTTCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLFLLGQSPCLSCPRLWAQRSSS*SASSGT Trigger: AGTCCCAGAAGAAGCGCTCCAGCTGCTGCTCCTTTG...AGCCCAAAGCCTTGGGCAAGATAAACATGGAGATTGTCCTAAGAGGAATAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR GCA 90 bp | CATTCCAGGAGCCAACAAGTTCTTTATCTGGCTCTGACCTCTGCCTTAAATATCCCAACTCCACGTTCATaGCAGTCTTGGCACTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSRSQQVLYLALTSALNIPTPRS*QSWHWS Trigger: AGACCAGTGCCAAGACTGGCATGAACGTGGAGTTGG...GATATTTAAGGCAGAGGTCAGAGCCAGATAAAGAACTTGTTGGCTCCTGGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR GCA 90 bp | TTGCTATTCCTCTTAGGACAATCTCCATGTTTATCTTGCCCAAGGCTTTGGGCTCCAACTCCACGTTCATaGCAGTCTTGGCACTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLFLLGQSPCLSCPRLWAPTPRS*QSWHWS Trigger: AGACCAGTGCCAAGACTGGCATGAACGTGGAGTTGG...AGCCCAAAGCCTTGGGCAAGATAAACATGGAGATTGTCCTAAGAGGAATAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | CTATATAGATGTAGTAAAGCTTCCTTTGGTCATGGATCTGCACACCTCCGAGTGTCTGAAGCTTCACCCTaGCACCATCCACTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LYRCSKASFGHGSAHLRVSEASP*HHPLSP Trigger: TGGTGACAGTGGATGGTGCCAGGGTGAAGCTTCAGA...CACTCGGAGGTGTGCAGATCCATGACCAAAGGAAGCTTTACTACATCTATATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAGGGAGAGAGAGAGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTTTGTCAAAAGAGGACTaGTTGGTGATGTCATACAAC | + |
|
Preference number: 4 (lower is better) Translates to: RERERERERASWGLVGKTLSKED*LVMSYN Trigger: GTTGTATGACATCACCAACCAGTCCTCTTTTGACAA...AGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCTCTCTCTCTCCCTCTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR TCA 90 bp | TTGCTATTCCTCTTAGGACAATCTCCATGTTTATCTTGCCCAAGGCTTTGGGCTTCACCACTTTATTCCTaGAGTCTATGCCGACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFLLGQSPCLSCPRLWASPLYS*SLCRRW Trigger: CCACCGTCGGCATAGACTTCAGGAATAAAGTGGTGA...AGCCCAAAGCCTTGGGCAAGATAAACATGGAGATTGTCCTAAGAGGAATAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
||
| CDS-3UTR CCA 90 bp | AGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTGGCCTATGGCTTTGTTCATTGTCAAAAGAGGACTaGTTGGTGATGTCATACAAC | + |
|
Preference number: 4 (lower is better) Translates to: RERASWGLVGKTGLWLCSLSKED*LVMSYN Trigger: GTTGTATGACATCACCAACCAGTCCTCTTTTGACAA...TGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | CAAGTTCTTTATCTGGCTCTGACCTCTGCCTTAAATATCCGTGGTGCTGTACACTGTCACCAACCAGAATaGTCTTGTGTAGGACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLYLALTSALNIRGAVHCHQPE*SCVGHA Trigger: AGCATGTCCTACACAAGACCATTCTGGTTGGTGACA...GTGTACAGCACCACGGATATTTAAGGCAGAGGTCAGAGCCAGATAAAGAACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | CATTCCAGGAGCCAACAAGTTCTTTATCTGGCTCTGACCTCTGCCTTAAATATCGGTATTTCAGTTCCTTaGCAATTGCCAGAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSRSQQVLYLALTSALNIGISVP*QLPERP Trigger: TGGCCTTTCTGGCAATTGCCAAGGAACTGAAATACC...GATATTTAAGGCAGAGGTCAGAGCCAGATAAAGAACTTGTTGGCTCCTGGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CCA 90 bp | AATATAGTAACCTCAGATATGTGTAATGCATACTTTCTTGGAGCCTCACTCGCTGCCCCGTCTTTGAATTaGATCAGGAAACAGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NIVTSDMCNAYFLGASLAAPSLN*IRKQVL Trigger: CAAAACCTGTTTCCTGATCCAATTCAAAGACGGGGC...AGCGAGTGAGGCTCCAAGAAAGTATGCATTACACATATCTGAGGTTACTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
||
| CDS TCA 90 bp | CGCCGCTGTCACCAACCAGAATGGTCTTGTGTAGGACATGCTCGCTaGAATGAGGGCCAGCTCCGCCCTGGTAGGAGTCCGGTCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRCHQPEWSCVGHAR*NEGQLRPGRSPVSA Trigger: TGCAGAGACCGGACTCCTACCAGGGCGGAGCTGGCCCTCATTTCAGCGAGCATGTCCTACACAAGACCATTCTGGTTGGTGACAGCGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
||
| CDS CCA 90 bp | TGGAGCGCTTCTTCTGGGACTCCACATAGTCTCGGATCTGGAAGCTaGGCTCATCAGGCTGCCTCCCTGCACGGTATTTCAGTTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WSASSGTPHSLGSGS*AHQAASLHGISVPW Trigger: CCAAGGAACTGAAATACCGTGCAGGGAGGCAGCCTGATGAGCCCAGCTTCCAGATCCGAGACTATGTGGAGTCCCAGAAGAAGCGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CAA 90 bp | AGTTGGTGTGGCAGTTGGAGTACTGCATCCCCAAGGGTCTCTGGGCCTCCTCTTATCAGGAAACAGGTTTaGCCGACGCCCGAGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SWCGSWSTASPRVSGPPLIRKQV*PTPESP Trigger: TGGAGACTCGGGCGTCGGCAAAACCTGTTTCCTGAT...AAGAGGAGGCCCAGAGACCCTTGGGGATGCAGTACTCCAACTGCCACACCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
||
| CDS CCA 90 bp | ACGGTGGCTATGAAGGTTCCGGACAGGAAGGCCCCGTCTTTGAATTaGATCAGGAAACAGGTTTTGCCGACGCCCGAGTCTCCAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVAMKVPDRKAPSLN*IRKQVLPTPESPRS Trigger: GCTTCTTGGAGACTCGGGCGTCGGCAAAACCTGTTTCCTGATCCAATTCAAAGACGGGGCCTTCCTGTCCGGAACCTTCATAGCCACCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
||
| CDS-3UTR CAA 90 bp | CCACTGCTCGTGTGTGCTGAAGAAAAAGCCCGTGCACGCTTCCAGAAGGAGGGTCCAACCAGAATGGTCTaGTGTAGGACATGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLVCAEEKARARFQKEGPTRMV*CRTCSL Trigger: CAGCGAGCATGTCCTACACAAGACCATTCTGGTTGG...ACCCTCCTTCTGGAAGCGTGCACGGGCTTTTTCTTCAGCACACACGAGCAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
||
| CDS GCA 90 bp | CACATAGTCTCGGATCTGGAAGCTGGGCTCATCAGGCTGCCTCCCTaGACGGTATTTCAGTTCCTTGGCAATTGCCAGAAAGGCCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: HIVSDLEAGLIRLPP*TVFQFLGNCQKGQL Trigger: GAGTTGGCCTTTCTGGCAATTGCCAAGGAACTGAAATACCGTGCAGGGAGGCAGCCTGATGAGCCCAGCTTCCAGATCCGAGACTATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CAA 90 bp | CCCCACTGCTCGTGTGTGCTGAAGAAAAAGCCCGTGCACGCTTCCAGAAGGAGGGGCCCCGTCTTTGAATaGGATCAGGAAACAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PHCSCVLKKKPVHASRRRGPVFE*DQETGF Trigger: AAAACCTGTTTCCTGATCCAATTCAAAGACGGGGCC...CCTCCTTCTGGAAGCGTGCACGGGCTTTTTCTTCAGCACACACGAGCAGTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
||
| CDS TCA 90 bp | ATCCACTGTCACCACTTTATTTGTGAATCCGATACCCACGGTGGCTaGGAAGGAGCCGGGGATGAACTTCCCCTGGTCAAACTGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: IHCHHFICESDTHGG*EGAGDELPLVKLNQ Trigger: CTGGTTCAGTTTGACCAGGGGAAGTTCATCCCCGGCTCCTTCTCAGCCACCGTGGGTATCGGATTCACAAATAAAGTGGTGACAGTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
||
| CDS-3UTR CAA 90 bp | AGTTGGTGTGGCAGTTGGAGTACTGCATCCCCAAGGGTCTCTGGGCCTCCTCTTTCAAAAGAGGACTGGTaGGTGATGTCATACAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWCGSWSTASPRVSGPPLSKEDW*VMSYNR Trigger: CCTGTTGTATGACATCACCAACCAGTCCTCTTTTGA...AAGAGGAGGCCCAGAGACCCTTGGGGATGCAGTACTCCAACTGCCACACCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CAA 90 bp | AAAAACTGGCCTATGGCTTTGTTCAGTTCTGCCTCCCACCCATTCCAGGAGCCAAGGAAGGCCCCGTCTTaGAATTGGATCAGGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: KNWPMALFSSASHPFQEPRKAPS*NWIRKQ Trigger: CTGTTTCCTGATCCAATTCAAAGACGGGGCCTTCCT...TGGCTCCTGGAATGGGTGGGAGGCAGAACTGAACAAAGCCATAGGCCAGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
||
| CDS-3UTR CAA 90 bp | AGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTGGCCTATGGCTTTGTTCATCAGTTCCTTGGCAATaGCCAGAAAGGCCAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RERASWGLVGKTGLWLCSSVPWQ*PERPTP Trigger: TGGAGTTGGCCTTTCTGGCAATTGCCAAGGAACTGA...TGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CAA 90 bp | TTAGTCCCAGAAAGCAAAGGACCACCGAGTCCCGACCTATTTTGGTTTTGGGGGTCAGTTCCTTGGCAATaGCCAGAAAGGCCAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVPESKGPPSPDLFWFWGSVPWQ*PERPTP Trigger: TGGAGTTGGCCTTTCTGGCAATTGCCAAGGAACTGA...CCCCCAAAACCAAAATAGGTCGGGACTCGGTGGTCCTTTGCTTTCTGGGACTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS TCA 90 bp | TTGTTGCCTAGAAGCATAATCACCACGTCTCTCTGGGCATACTCATaGATCTCTGTGAGCCAGGCCCTGATGTTGTCAAAAGAGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPRSIITTSLWAYS*ISVSQALMLSKEDW Trigger: CCAGTCCTCTTTTGACAACATCAGGGCCTGGCTCACAGAGATTCATGAGTATGCCCAGAGAGACGTGGTGATTATGCTTCTAGGCAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS-3UTR CAA 90 bp | AGAGAGCGAGCAAGCTGGGGCTTAGTGGGAAAAACTGGCCTATGGCTTTGTTCATCAAAAGAGGACTGGTaGGTGATGTCATACAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RERASWGLVGKTGLWLCSSKEDW*VMSYNR Trigger: CCTGTTGTATGACATCACCAACCAGTCCTCTTTTGA...TGAACAAAGCCATAGGCCAGTTTTTCCCACTAAGCCCCAGCTTGCTCGCTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
||
| CDS TCA 72 bp | CACCAACCAGAATGGTCTTGTGTAGGACATGCTCGCTaGAATGAGGGCCAGCTCCGCCCTGGTAGGAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: HQPEWSCVGHAR*NEGQLRPGRSP Trigger: CGGACTCCTACCAGGGCGGAGCTGGCCCTCATTTCAGCGAGCATGTCCTACACAAGACCATTCTGGTTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
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| CDS CAA 90 bp | CCGGACAGGAAGGCCCCGTCTTTGAATTGGATCAGGAAACAGGTTTaGCCGACGCCCGAGTCTCCAAGAAGCATCACCTTGCCGGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PDRKAPSLNWIRKQV*PTPESPRSITLPVR Trigger: TCTCACCGGCAAGGTGATGCTTCTTGGAGACTCGGGCGTCGGCAAAACCTGTTTCCTGATCCAATTCAAAGACGGGGCCTTCCTGTCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
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| CDS CAA 90 bp | ATGCCGACGGTGGCTATGAAGGTTCCGGACAGGAAGGCCCCGTCTTaGAATTGGATCAGGAAACAGGTTTTGCCGACGCCCGAGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: MPTVAMKVPDRKAPS*NWIRKQVLPTPESP Trigger: TGGAGACTCGGGCGTCGGCAAAACCTGTTTCCTGATCCAATTCAAAGACGGGGCCTTCCTGTCCGGAACCTTCATAGCCACCGTCGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
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| CDS CAA 90 bp | GACGGTGGCTATGAAGGTTCCGGACAGGAAGGCCCCGTCTTTGAATaGGATCAGGAAACAGGTTTTGCCGACGCCCGAGTCTCCAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: DGGYEGSGQEGPVFE*DQETGFADARVSKK Trigger: CTTCTTGGAGACTCGGGCGTCGGCAAAACCTGTTTCCTGATCCAATTCAAAGACGGGGCCTTCCTGTCCGGAACCTTCATAGCCACCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
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| CDS CAA 90 bp | GCTCATCAGGCTGCCTCCCTGCACGGTATTTCAGTTCCTTGGCAATaGCCAGAAAGGCCAACTCCACGTTCATGCCAGTCTTGGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: AHQAASLHGISVPWQ*PERPTPRSCQSWHW Trigger: CCAGTGCCAAGACTGGCATGAACGTGGAGTTGGCCTTTCTGGCAATTGCCAAGGAACTGAAATACCGTGCAGGGAGGCAGCCTGATGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| CDS TCA 72 bp | ATCCGATACCCACGGTGGCTGAGAAGGAGCCGGGGATaGACTTCCCCTGGTCAAACTGAACCAGTAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: IRYPRWLRRSRG*TSPGQTEPVEM Trigger: CATCTCTACTGGTTCAGTTTGACCAGGGGAAGTTCATCCCCGGCTCCTTCTCAGCCACCGTGGGTATCGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
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| CDS TCA 72 bp | TCACCCTGGCACCATCCACTGTCACCACTTTATTTGTaGATCCGATACCCACGGTGGCTGAGAAGGAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SPWHHPLSPLYL*IRYPRWLRRSR Trigger: CCGGCTCCTTCTCAGCCACCGTGGGTATCGGATTCACAAATAAAGTGGTGACAGTGGATGGTGCCAGGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
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| CDS CCA 72 bp | TCTTCTGGGACTCCACATAGTCTCGGATCTGGAAGCTaGGCTCATCAGGCTGCCTCCCTGCACGGTATTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSGTPHSLGSGS*AHQAASLHGIS Trigger: TGAAATACCGTGCAGGGAGGCAGCCTGATGAGCCCAGCTTCCAGATCCGAGACTATGTGGAGTCCCAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| CDS CAA 72 bp | GTGGCTATGAAGGTTCCGGACAGGAAGGCCCCGTCTTaGAATTGGATCAGGAAACAGGTTTTGCCGACGCCC | + |
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Preference number: 6 (lower is better) Translates to: VAMKVPDRKAPS*NWIRKQVLPTP Trigger: GGGCGTCGGCAAAACCTGTTTCCTGATCCAATTCAAAGACGGGGCCTTCCTGTCCGGAACCTTCATAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
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| CDS CCA 72 bp | ATGAAGGTTCCGGACAGGAAGGCCCCGTCTTTGAATTaGATCAGGAAACAGGTTTTGCCGACGCCCGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: MKVPDRKAPSLN*IRKQVLPTPES Trigger: AGACTCGGGCGTCGGCAAAACCTGTTTCCTGATCCAATTCAAAGACGGGGCCTTCCTGTCCGGAACCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
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| CDS CCA 72 bp | CATCAGGCTGCCTCCCTGCACGGTATTTCAGTTCCTTaGCAATTGCCAGAAAGGCCAACTCCACGTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: HQAASLHGISVP*QLPERPTPRSC Trigger: GCATGAACGTGGAGTTGGCCTTTCTGGCAATTGCCAAGGAACTGAAATACCGTGCAGGGAGGCAGCCTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| CDS CAA 72 bp | TATGAAGGTTCCGGACAGGAAGGCCCCGTCTTTGAATaGGATCAGGAAACAGGTTTTGCCGACGCCCGAGTC | + |
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Preference number: 6 (lower is better) Translates to: YEGSGQEGPVFE*DQETGFADARV Trigger: GACTCGGGCGTCGGCAAAACCTGTTTCCTGATCCAATTCAAAGACGGGGCCTTCCTGTCCGGAACCTTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
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| CDS CAA 72 bp | GCTGCCTCCCTGCACGGTATTTCAGTTCCTTGGCAATaGCCAGAAAGGCCAACTCCACGTTCATGCCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: AASLHGISVPWQ*PERPTPRSCQS Trigger: AGACTGGCATGAACGTGGAGTTGGCCTTTCTGGCAATTGCCAAGGAACTGAAATACCGTGCAGGGAGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| CDS TCA 72 bp | CACCACTTTATTTGTGAATCCGATACCCACGGTGGCTaGGAAGGAGCCGGGGATGAACTTCCCCTGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: HHFICESDTHGG*EGAGDELPLVK Trigger: TTTGACCAGGGGAAGTTCATCCCCGGCTCCTTCTCAGCCACCGTGGGTATCGGATTCACAAATAAAGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067754.11 |
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| CDS CAA 72 bp | AAGGCCCCGTCTTTGAATTGGATCAGGAAACAGGTTTaGCCGACGCCCGAGTCTCCAAGAAGCATCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: KAPSLNWIRKQV*PTPESPRSITL Trigger: CAAGGTGATGCTTCTTGGAGACTCGGGCGTCGGCAAAACCTGTTTCCTGATCCAATTCAAAGACGGGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021076.6 |
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| CDS CAA 72 bp | TCATCAGGCTGCCTCCCTGCACGGTATTTCAGTTCCTaGGCAATTGCCAGAAAGGCCAACTCCACGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: SSGCLPARYFSS*AIARKANSTFM Trigger: CATGAACGTGGAGTTGGCCTTTCTGGCAATTGCCAAGGAACTGAAATACCGTGCAGGGAGGCAGCCTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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| CDS TCA 72 bp | AGAAGCATAATCACCACGTCTCTCTGGGCATACTCATaGATCTCTGTGAGCCAGGCCCTGATGTTGTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: RSIITTSLWAYS*ISVSQALMLSK Trigger: TTTTGACAACATCAGGGCCTGGCTCACAGAGATTCATGAGTATGCCCAGAGAGACGTGGTGATTATGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021076.6 ENSMUST00000067754.11 |
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