Pregenerated sensors for RAB35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029518Ensembl transcript IDs: ENSMUST00000031492.15, ENSMUST00000138885.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGTCCTCACCAGGTCCATGCGCCTCGGCAGGGAAGAGGGCACCGTaGGGAAGGGCGGGCTCGTCCAACACCTTCTTGGCACTCAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: ASSPGPCASAGKRAP*GRAGSSNTFLALKG Trigger: CCCCTTGAGTGCCAAGAAGGTGTTGGACGAGCCCGCCCTTCCCCACGGTGCCCTCTTCCCTGCCGAGGCGCATGGACCTGGTGAGGACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| 3UTR GCA 90 bp | CTGGTTAATCAGTCCACTCAGCTGGCAGCGTCCTCACCAGGTCCATaGGCCTCGGCAGGGAAGAGGGCACCGTGGGGAAGGGCGGGCTCG | + |
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Preference number: 1 (lower is better) Translates to: LVNQSTQLAASSPGP*ASAGKRAPWGRAGS Trigger: CGAGCCCGCCCTTCCCCACGGTGCCCTCTTCCCTGCCGAGGCGCATGGACCTGGTGAGGACGCTGCCAGCTGAGTGGACTGATTAACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| 3UTR CCA 90 bp | CGTCGAGCTGGGACGGAGGGCTGGGGAGGGTCTGTTGCAGCAGGTTaGCAGGAAGGAGCCAAAAGCCAGAGCAGGCTGAGGGTGTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RRAGTEGWGGSVAAG*QEGAKSQSRLRVCS Trigger: GCTGCACACCCTCAGCCTGCTCTGGCTTTTGGCTCCTTCCTGCCAACCTGCTGCAACAGACCCTCCCCAGCCCTCCGTCCCAGCTCGACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR TCA 90 bp | CCTGTTGTCCAAAAGGGCAGGACTGAGTTCCTCTGTGGAAGGAACTaGAGGCCTAGCGGCCAGCAGAGGGCAGGGCCTGTGTGGAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: PVVQKGRTEFLCGRN*RPSGQQRAGPVWSQ Trigger: CTGGCTCCACACAGGCCCTGCCCTCTGCTGGCCGCTAGGCCTTCAGTTCCTTCCACAGAGGAACTCAGTCCTGCCCTTTTGGACAACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR GCA 90 bp | CCTTCCCAGAGCCCAGCAACCCCTGGCTCTGGCACAGGCGCCTGGTaGTACATTACAGACTTTCTTTCTCCAGTGGGAGGCCCTCGAGCA | + |
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Preference number: 1 (lower is better) Translates to: PSQSPATPGSGTGAW*YITDFLSPVGGPRA Trigger: TGCTCGAGGGCCTCCCACTGGAGAAAGAAAGTCTGTAATGTAGCACCAGGCGCCTGTGCCAGAGCCAGGGGTTGCTGGGCTCTGGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR GCA 90 bp | GTCACTTGCCCAGAACAACAGGCCCTGGGTCAGCCAAGGCAGGCCTaGAGACAGTCTCTGCCTCAACTCCCAGCTCACCGGAACCATGTG | + |
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Preference number: 1 (lower is better) Translates to: VTCPEQQALGQPRQA*RQSLPQLPAHRNHV Trigger: CACATGGTTCCGGTGAGCTGGGAGTTGAGGCAGAGACTGTCTGCAGGCCTGCCTTGGCTGACCCAGGGCCTGTTGTTCTGGGCAAGTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CCA 90 bp | AGCCAGGTTCCCAGCTCCCAGAGCAGCTGTAGGGTAGGAGCCATGTaGAGTGCACTCCATGGGCCAGGGATGAATGGCCAAAGACTCGGC | + |
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Preference number: 1 (lower is better) Translates to: SQVPSSQSSCRVGAM*SALHGPGMNGQRLG Trigger: GCCGAGTCTTTGGCCATTCATCCCTGGCCCATGGAGTGCACTCCACATGGCTCCTACCCTACAGCTGCTCTGGGAGCTGGGAACCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CCA 90 bp | GTGCCTTCCCAGAGCCCAGCAACCCCTGGCTCTGGCACAGGCGCCTaGTGCTACATTACAGACTTTCTTTCTCCAGTGGGAGGCCCTCGA | + |
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Preference number: 1 (lower is better) Translates to: VPSQSPATPGSGTGA*CYITDFLSPVGGPR Trigger: TCGAGGGCCTCCCACTGGAGAAAGAAAGTCTGTAATGTAGCACCAGGCGCCTGTGCCAGAGCCAGGGGTTGCTGGGCTCTGGGAAGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR GCA 90 bp | CATCTGTCAGTAATGCAAAAACCACCAGTCGGTCCCAGCTTGAGGTaGCTTCCCAGAGCCCAGCAACCCCTGGCTCTGGCACAGGCGCCT | + |
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Preference number: 1 (lower is better) Translates to: HLSVMQKPPVGPSLR*LPRAQQPLALAQAP Trigger: AGGCGCCTGTGCCAGAGCCAGGGGTTGCTGGGCTCTGGGAAGGCACCTCAAGCTGGGACCGACTGGTGGTTTTTGCATTACTGACAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR GCA 90 bp | AACAACAGGCCCTGGGTCAGCCAAGGCAGGCCTGCAGACAGTCTCTaGCTCAACTCCCAGCTCACCGGAACCATGTGGAGTCGCCTAATG | + |
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Preference number: 1 (lower is better) Translates to: NNRPWVSQGRPADSL*LNSQLTGTMWSRLM Trigger: CATTAGGCGACTCCACATGGTTCCGGTGAGCTGGGAGTTGAGGCAGAGACTGTCTGCAGGCCTGCCTTGGCTGACCCAGGGCCTGTTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CCA 90 bp | GCCCTCGAGCACACAGGTATGAGGGTGCAAAGCCAGCCTTTCCCATaGAAGGGAGAGCGCCTAGCCCTGCACTCAACAGAAGCCATACAC | + |
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Preference number: 1 (lower is better) Translates to: ALEHTGMRVQSQPFP*KGERLALHSTEAIH Trigger: GTGTATGGCTTCTGTTGAGTGCAGGGCTAGGCGCTCTCCCTTCCATGGGAAAGGCTGGCTTTGCACCCTCATACCTGTGTGCTCGAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CCA 90 bp | CTGGCACAGGCGCCTGGTGCTACATTACAGACTTTCTTTCTCCAGTaGGAGGCCCTCGAGCACACAGGTATGAGGGTGCAAAGCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: LAQAPGATLQTFFLQ*EALEHTGMRVQSQP Trigger: AGGCTGGCTTTGCACCCTCATACCTGTGTGCTCGAGGGCCTCCCACTGGAGAAAGAAAGTCTGTAATGTAGCACCAGGCGCCTGTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CCA 90 bp | TCCCATGTGTTCAGAAGCATGTCACTTGCCCAGAACAACAGGCCCTaGGTCAGCCAAGGCAGGCCTGCAGACAGTCTCTGCCTCAACTCC | + |
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Preference number: 1 (lower is better) Translates to: SHVFRSMSLAQNNRP*VSQGRPADSLCLNS Trigger: GGAGTTGAGGCAGAGACTGTCTGCAGGCCTGCCTTGGCTGACCCAGGGCCTGTTGTTCTGGGCAAGTGACATGCTTCTGAACACATGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CCA 90 bp | AGGCCTCCAGGCCTCAGGCTGGGAGGGATGCAGTGCAGTCTCTGCTaGGGCTGGGGCATTAGCAGCAGCGTTTCTTTCGTTTACTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: RPPGLRLGGMQCSLC*GWGISSSVSFVYCF Trigger: AAAACAGTAAACGAAAGAAACGCTGCTGCTAATGCCCCAGCCCCAGCAGAGACTGCACTGCATCCCTCCCAGCCTGAGGCCTGGAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| 3UTR GCA 90 bp | AAACACTCCCATCCTGGCTTCCCATGTGTTCAGAAGCATGTCACTTaGCCAGAACAACAGGCCCTGGGTCAGCCAAGGCAGGCCTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: KHSHPGFPCVQKHVT*PEQQALGQPRQACR Trigger: TCTGCAGGCCTGCCTTGGCTGACCCAGGGCCTGTTGTTCTGGGCAAGTGACATGCTTCTGAACACATGGGAAGCCAGGATGGGAGTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CCA 90 bp | CCTGCAGACAGTCTCTGCCTCAACTCCCAGCTCACCGGAACCATGTaGAGTCGCCTAATGCTTGACCCTGAAGTGTCTTCCCCAAACCCA | + |
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Preference number: 1 (lower is better) Translates to: PADSLCLNSQLTGTM*SRLMLDPEVSSPNP Trigger: TGGGTTTGGGGAAGACACTTCAGGGTCAAGCATTAGGCGACTCCACATGGTTCCGGTGAGCTGGGAGTTGAGGCAGAGACTGTCTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR TCA 90 bp | AAATCACCCACCACCCAGGCCTTAACAGGCTGGTGCCAGAAGCCATaGAGGCATCCAACTTGGGCTGATGCTCCGAGATCACCCTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: KSPTTQALTGWCQKP*RHPTWADAPRSPFY Trigger: ATAAAAGGGTGATCTCGGAGCATCAGCCCAAGTTGGATGCCTTCATGGCTTCTGGCACCAGCCTGTTAAGGCCTGGGTGGTGGGTGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CCA 90 bp | TCTTTACAGATGTCCCACTACCTTTCTGCGGGAACTGAAACATGTTaGGTAAGTGAGAAGCCATGGCTCTCCTGGGTCTGTAGCAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: SLQMSHYLSAGTETC*VSEKPWLSWVCSRG Trigger: GCCTCTGCTACAGACCCAGGAGAGCCATGGCTTCTCACTTACCCAACATGTTTCAGTTCCCGCAGAAAGGTAGTGGGACATCTGTAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR TCA 90 bp | GGCATCCAACTTGGGCTGATGCTCCGAGATCACCCTTTTATTGCTTaGATTGGCAAACACTCCCATCCTGGCTTCCCATGTGTTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: GIQLGLMLRDHPFIA*IGKHSHPGFPCVQK Trigger: CTTCTGAACACATGGGAAGCCAGGATGGGAGTGTTTGCCAATTCAAGCAATAAAAGGGTGATCTCGGAGCATCAGCCCAAGTTGGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR TCA 90 bp | CCCACTAATATTCGGCACACATCGTCACAGTTCTGGTTGATTTCATaGAGCCATCGCTTGACGTTGACAAAGGACTCGGCACTAGTGACG | + |
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Preference number: 1 (lower is better) Translates to: PTNIRHTSSQFWLIS*SHRLTLTKDSALVT Trigger: CGTCACTAGTGCCGAGTCCTTTGTCAACGTCAAGCGATGGCTTCATGAAATCAACCAGAACTGTGACGATGTGTGCCGAATATTAGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| 3UTR GCA 90 bp | GCAGGTTGGCAGGAAGGAGCCAAAAGCCAGAGCAGGCTGAGGGTGTaGAGCTGGTTAATGCAATATACACTATGTACAAACTGGTTAATC | + |
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Preference number: 1 (lower is better) Translates to: AGWQEGAKSQSRLRV*SWLMQYTLCTNWLI Trigger: GATTAACCAGTTTGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTGGCTTTTGGCTCCTTCCTGCCAACCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| 3UTR CCA 90 bp | CTGAGGGTGTGCAGCTGGTTAATGCAATATACACTATGTACAAACTaGTTAATCAGTCCACTCAGCTGGCAGCGTCCTCACCAGGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: LRVCSWLMQYTLCTN*LISPLSWQRPHQVH Trigger: ATGGACCTGGTGAGGACGCTGCCAGCTGAGTGGACTGATTAACCAGTTTGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| 3UTR GCA 90 bp | CGTTTACTGTTTTTGGTGAGCTTCACCACATCGTTCTGTTGTTGCTaGTGCTGTTTCGCCAAGTTGTCTTTCTTTGCTCGCAGAACCAGC | + |
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Preference number: 1 (lower is better) Translates to: RLLFLVSFTTSFCCC*CCFAKLSFFARRTS Trigger: GCTGGTTCTGCGAGCAAAGAAAGACAACTTGGCGAAACAGCAGCAGCAACAACAGAACGATGTGGTGAAGCTCACCAAAAACAGTAAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| 3UTR CCA 90 bp | TGGCAGGAAGGAGCCAAAAGCCAGAGCAGGCTGAGGGTGTGCAGCTaGTTAATGCAATATACACTATGTACAAACTGGTTAATCAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: WQEGAKSQSRLRVCS*LMQYTLCTNWLISP Trigger: TGGACTGATTAACCAGTTTGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTGGCTTTTGGCTCCTTCCTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| 3UTR CCA 90 bp | CCGAGATCACCCTTTTATTGCTTGAATTGGCAAACACTCCCATCCTaGCTTCCCATGTGTTCAGAAGCATGTCACTTGCCCAGAACAACA | + |
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Preference number: 1 (lower is better) Translates to: PRSPFYCLNWQTLPS*LPMCSEACHLPRTT Trigger: TGTTGTTCTGGGCAAGTGACATGCTTCTGAACACATGGGAAGCCAGGATGGGAGTGTTTGCCAATTCAAGCAATAAAAGGGTGATCTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR GCA 90 bp | TTACTGTTTTTGGTGAGCTTCACCACATCGTTCTGTTGTTGCTGCTaGTGTTTCGCCAAGTTGTCTTTCTTTGCTCGCAGAACCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LLFLVSFTTSFCCCC*CFAKLSFFARRTSS Trigger: AGAGCTGGTTCTGCGAGCAAAGAAAGACAACTTGGCGAAACAGCAGCAGCAACAACAGAACGATGTGGTGAAGCTCACCAAAAACAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| 3UTR GCA 90 bp | AACTTAGTTCATTTGATTTGGCTTCATTGGCTGTATTTGTTAAAATaGTCCTCCTTGCGAGCTCCGTCTCTTTACAGATGTCCCACTACC | + |
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Preference number: 1 (lower is better) Translates to: NLVHLIWLHWLYLLK*SSLRAPSLYRCPTT Trigger: GGTAGTGGGACATCTGTAAAGAGACGGAGCTCGCAAGGAGGAGCATTTTAACAAATACAGCCAATGAAGCCAAATCAAATGAACTAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CCA 90 bp | AAGGAAATAATCGTGAGGAACTTAGTTCATTTGATTTGGCTTCATTaGCTGTATTTGTTAAAATGCTCCTCCTTGCGAGCTCCGTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: KEIIVRNLVHLIWLH*LYLLKCSSLRAPSL Trigger: AAGAGACGGAGCTCGCAAGGAGGAGCATTTTAACAAATACAGCCAATGAAGCCAAATCAAATGAACTAAGTTCCTCACGATTATTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCGTCCTCACCAGGTCCATGCGCCTCGGCAGGGAAGAGGGCACCGTGGGGCTCCAGGCCTCAGGCTaGGAGGGATGCAGTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: GSVLTRSMRLGREEGTVGLQASG*EGCSAV Trigger: GACTGCACTGCATCCCTCCCAGCCTGAGGCCTGGAG...CCCCACGGTGCCCTCTTCCCTGCCGAGGCGCATGGACCTGGTGAGGACGCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCCTGCAGACAGTCTCTGCCTCAACTCCCAGCTCACCGGAACCATGTGGAGAGCCCAGCAACCCCTaGCTCTGGCACAGGCGCCTG | + |
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Preference number: 2 (lower is better) Translates to: AGLQTVSASTPSSPEPCGEPSNP*LWHRRL Trigger: CAGGCGCCTGTGCCAGAGCCAGGGGTTGCTGGGCTC...TCCACATGGTTCCGGTGAGCTGGGAGTTGAGGCAGAGACTGTCTGCAGGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR-3UTR TCA 90 bp | CGGGCCCACCAGGGTACCAGTGTAGCCCTGATTCTCCCACCCTTATCCCCACCCTCCCCAAACCCAGCCTaGTGCTCAGAAACACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RAHQGTSVALILPPLSPPSPNPA*CSETQN Trigger: GTTCTGTGTTTCTGAGCATCAGGCTGGGTTTGGGGA...GGGTGGGGATAAGGGTGGGAGAATCAGGGCTACACTGGTACCCTGGTGGGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCCCATGGAAGGGAGAGCGCCTAGCCCTGCACTCAACAGAAGCCATACACCTGGGAGGGATGCAGTaGAGTCTCTGCTGGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PFPWKGERLALHSTEAIHLGGMQ*SLCWGW Trigger: CCAGCCCCAGCAGAGACTGCACTGCATCCCTCCCAG...GTGTATGGCTTCTGTTGAGTGCAGGGCTAGGCGCTCTCCCTTCCATGGGAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR-3UTR CCA 90 bp | CAAAGAGCTGGATCCCCATCTGCCCGGCAAATTTGTAGGCATCTTCTGTCTCTAGGGAAGAGGGCACCGTaGGGAAGGGCGGGCTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: QRAGSPSARQICRHLLSLGKRAP*GRAGSS Trigger: GGACGAGCCCGCCCTTCCCCACGGTGCCCTCTTCCC...TAGAGACAGAAGATGCCTACAAATTTGCCGGGCAGATGGGGATCCAGCTCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| 3UTR CAA 90 bp | CAAACACTCCCATCCTGGCTTCCCATGTGTTCAGAAGCATGTCACTaGCCCAGAACAACAGGCCCTGGGTCAGCCAAGGCAGGCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QTLPSWLPMCSEACH*PRTTGPGSAKAGLQ Trigger: CTGCAGGCCTGCCTTGGCTGACCCAGGGCCTGTTGTTCTGGGCAAGTGACATGCTTCTGAACACATGGGAAGCCAGGATGGGAGTGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAAATAACGGCACTAAACTGAGACTGTCCCCCGAGGCCTCCAGGCCTCAGCTCCAGGCCTCAGGCTaGGAGGGATGCAGTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SLNNGTKLRLSPEASRPQLQASG*EGCSAV Trigger: GACTGCACTGCATCCCTCCCAGCCTGAGGCCTGGAG...CTGAGGCCTGGAGGCCTCGGGGGACAGTCTCAGTTTAGTGCCGTTATTTAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGATGTCCCACTACCTTTCTGCGGGAACTGAAACATGTTGGGTAAGTGAGGGGAAGAGGGCACCGTaGGGAAGGGCGGGCTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: LQMSHYLSAGTETCWVSEGKRAP*GRAGSS Trigger: GGACGAGCCCGCCCTTCCCCACGGTGCCCTCTTCCC...CTCACTTACCCAACATGTTTCAGTTCCCGCAGAAAGGTAGTGGGACATCTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGAGCAGGCTGAGGGTGTGCAGCTGGTTAATGCAATATACACTATGTACAAAGCTGCCGTCGAGCTaGGACGGAGGGCTGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SQSRLRVCSWLMQYTLCTKLPSS*DGGLGR Trigger: CCTCCCCAGCCCTCCGTCCCAGCTCGACGGCAGCTT...TGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTAATCAGTCCACTCAGCTGGCAGCGTCCTCACCAGGTCCATGCGCCTCGACATCGTTCTGTTGTTaGTGCTGCTGTTTCGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LVNQSTQLAASSPGPCASTSFCC*CCCFAK Trigger: CTTGGCGAAACAGCAGCAGCAACAACAGAACGATGT...CGAGGCGCATGGACCTGGTGAGGACGCTGCCAGCTGAGTGGACTGATTAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAAATTTGTAGGCATCTTCTGTCTCTACCACCTTCCGCTCAGGGTCATCATTCTGGGAGGGATGCAGTaGAGTCTCTGCTGGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GKFVGIFCLYHLPLRVIILGGMQ*SLCWGW Trigger: CCAGCCCCAGCAGAGACTGCACTGCATCCCTCCCAG...AATGATGACCCTGAGCGGAAGGTGGTAGAGACAGAAGATGCCTACAAATTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| 3UTR-3UTR GCA 90 bp | GGCGAGAATTCTTTAAATAACGGCACTAAACTGAGACTGTCCCCCGAGGCCTCCATGCAGTGCAGTCTCTaGTGGGGCTGGGGCATTAGC | + |
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Preference number: 2 (lower is better) Translates to: GENSLNNGTKLRLSPEASMQCSL*WGWGIS Trigger: GCTAATGCCCCAGCCCCAGCAGAGACTGCACTGCAT...GGAGGCCTCGGGGGACAGTCTCAGTTTAGTGCCGTTATTTAAAGAATTCTCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGAGAATTCTTTAAATAACGGCACTAAACTGAGACTGTCCCCCGAGGCCTCCATAACGGCACTAAACTaGGACTGTCCCCCGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GENSLNNGTKLRLSPEASITALN*DCPPRP Trigger: AGGCCTCGGGGGACAGTCTCAGTTTAGTGCCGTTAT...GGAGGCCTCGGGGGACAGTCTCAGTTTAGTGCCGTTATTTAAAGAATTCTCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGAGCTGGATCCCCATCTGCCCGGCAAATTTGTAGGCATCTTCTGTCTCTACGTCGTAAACCACAATaGCCCCATGGGTCCCCCGAT | + |
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Preference number: 2 (lower is better) Translates to: QRAGSPSARQICRHLLSLRRKPQ*PHGSPD Trigger: ATCGGGGGACCCATGGGGTCATTGTGGTTTACGACG...TAGAGACAGAAGATGCCTACAAATTTGCCGGGCAGATGGGGATCCAGCTCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| 3UTR-3UTR GCA 90 bp | CGGGCCCACCAGGGTACCAGTGTAGCCCTGATTCTCCCACCCTTATCCCCACCCAGATCACCCTTTTATTaGTTGAATTGGCAAACACTC | + |
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Preference number: 2 (lower is better) Translates to: RAHQGTSVALILPPLSPPRSPFY*LNWQTL Trigger: GAGTGTTTGCCAATTCAAGCAATAAAAGGGTGATCT...GGGTGGGGATAAGGGTGGGAGAATCAGGGCTACACTGGTACCCTGGTGGGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR-3UTR CCA 90 bp | GGCGAGAATTCTTTAAATAACGGCACTAAACTGAGACTGTCCCCCGAGGCCTCCGGGAGGAAGTGCCGATaGCGCCTCCCCATACAAAAA | + |
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Preference number: 2 (lower is better) Translates to: GENSLNNGTKLRLSPEASGRKCR*RLPIQK Trigger: TTTTTGTATGGGGAGGCGCCATCGGCACTTCCTCCC...GGAGGCCTCGGGGGACAGTCTCAGTTTAGTGCCGTTATTTAAAGAATTCTCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGCAGGCTGAGGGTGTGCAGCTGGTTAATGCAATATACACTATGTACAAATCAGGCTGGGAGGGATaGAGTGCAGTCTCTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PEQAEGVQLVNAIYTMYKSGWEG*SAVSAG Trigger: CCCAGCAGAGACTGCACTGCATCCCTCCCAGCCTGA...TTTGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTGCTGGGGCTGGGGCATTAGCAGCAGCGTTTCTTTCGTTTACTGTTTTTGGGAGGAAGTGCCGATaGCGCCTCCCCATACAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VSAGAGALAAAFLSFTVFGRKCR*RLPIQK Trigger: TTTTTGTATGGGGAGGCGCCATCGGCACTTCCTCCC...AAAAACAGTAAACGAAAGAAACGCTGCTGCTAATGCCCCAGCCCCAGCAGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR-3UTR CCA 90 bp | TACACTATGTACAAACTGGTTAATCAGTCCACTCAGCTGGCAGCGTCCTCACCAGTGGAGTGCACTCCATaGGCCAGGGATGAATGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YTMYKLVNQSTQLAASSPVECTP*ARDEWP Trigger: TGGCCATTCATCCCTGGCCCATGGAGTGCACTCCAC...TGGTGAGGACGCTGCCAGCTGAGTGGACTGATTAACCAGTTTGTACATAGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR TCA 90 bp | ATTTGGCTTCATTGGCTGTATTTGTTAAAATGCTCCTCCTTGCGAGCTCCGTCTCTCTGTGGAAGGAACTaGAGGCCTAGCGGCCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: IWLHWLYLLKCSSLRAPSLCGRN*RPSGQQ Trigger: CTGCTGGCCGCTAGGCCTTCAGTTCCTTCCACAGAG...AGACGGAGCTCGCAAGGAGGAGCATTTTAACAAATACAGCCAATGAAGCCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGCAGGCTGAGGGTGTGCAGCTGGTTAATGCAATATACACTATGTACAAACATAACGGCACTAAACTaGGACTGTCCCCCGAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: QSRLRVCSWLMQYTLCTNITALN*DCPPRP Trigger: AGGCCTCGGGGGACAGTCTCAGTTTAGTGCCGTTAT...GTTTGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTGGCAAACACTCCCATCCTGGCTTCCCATGTGTTCAGAAGCATGTCACTTCCAAAAGGGCAGGACTaGGTTCCTCTGTGGAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ELANTPILASHVFRSMSLPKGQD*VPLWKE Trigger: TTCCTTCCACAGAGGAACTCAGTCCTGCCCTTTTGG...AAGTGACATGCTTCTGAACACATGGGAAGCCAGGATGGGAGTGTTTGCCAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CAA 90 bp | AGGCATCCAACTTGGGCTGATGCTCCGAGATCACCCTTTTATTGCTaGAATTGGCAAACACTCCCATCCTGGCTTCCCATGTGTTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RHPTWADAPRSPFYC*NWQTLPSWLPMCSE Trigger: TTCTGAACACATGGGAAGCCAGGATGGGAGTGTTTGCCAATTCAAGCAATAAAAGGGTGATCTCGGAGCATCAGCCCAAGTTGGATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAGCAGGCTGAGGGTGTGCAGCTGGTTAATGCAATATACACTATGTACAAACGTCCAACACCTTCTTaGCACTCAAGGGGAAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PEQAEGVQLVNAIYTMYKRPTPS*HSRGKG Trigger: CCCTTTTCCCCTTGAGTGCCAAGAAGGTGTTGGACG...TTTGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
||
| 3UTR-3UTR CCA 90 bp | TATACACTATGTACAAACTGGTTAATCAGTCCACTCAGCTGGCAGCGTCCTCACTCTGTTGCAGCAGGTTaGCAGGAAGGAGCCAAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: YTLCTNWLISPLSWQRPHSVAAG*QEGAKS Trigger: GCTTTTGGCTCCTTCCTGCCAACCTGCTGCAACAGA...GTGAGGACGCTGCCAGCTGAGTGGACTGATTAACCAGTTTGTACATAGTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAAACACATCTGTCAGTAATGCAAAAACCACCAGTCGGTCCCAGCTTGAGGTGGTAAGTGAGAAGCCATaGCTCTCCTGGGTCTGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: KNTSVSNAKTTSRSQLEVVSEKP*LSWVCS Trigger: GCTACAGACCCAGGAGAGCCATGGCTTCTCACTTAC...CACCTCAAGCTGGGACCGACTGGTGGTTTTTGCATTACTGACAGATGTGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGCTGGTTAATGCAATATACACTATGTACAAACTGGTTAATCAGTCCACTCCAGTGCAGTCTCTGCTaGGGCTGGGGCATTAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: CSWLMQYTLCTNWLISPLQCSLC*GWGISS Trigger: GCTGCTAATGCCCCAGCCCCAGCAGAGACTGCACTG...GAGTGGACTGATTAACCAGTTTGTACATAGTGTATATTGCATTAACCAGCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR-3UTR TCA 90 bp | TATACACTATGTACAAACTGGTTAATCAGTCCACTCAGCTGGCAGCGTCCTCACCGTCACAGTTCTGGTTaGTTTCATGAAGCCATCGCT | + |
|
Preference number: 2 (lower is better) Translates to: YTLCTNWLISPLSWQRPHRHSSG*FHEAIA Trigger: AGCGATGGCTTCATGAAATCAACCAGAACTGTGACG...GTGAGGACGCTGCCAGCTGAGTGGACTGATTAACCAGTTTGTACATAGTGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCATATCTTTTGCTATTGAGCCAATCAGATCTCAAGGAAATAATCGTGAGGAATCAGGCTGGGAGGGATaGAGTGCAGTCTCTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VISFAIEPIRSQGNNREESGWEG*SAVSAG Trigger: CCCAGCAGAGACTGCACTGCATCCCTCCCAGCCTGA...TTCCTCACGATTATTTCCTTGAGATCTGATTGGCTCAATAGCAAAAGATATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CAA 90 bp | CATTTGATTTGGCTTCATTGGCTGTATTTGTTAAAATGCTCCTCCTaGCGAGCTCCGTCTCTTTACAGATGTCCCACTACCTTTCTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: HLIWLHWLYLLKCSS*RAPSLYRCPTTFLR Trigger: CCGCAGAAAGGTAGTGGGACATCTGTAAAGAGACGGAGCTCGCAAGGAGGAGCATTTTAACAAATACAGCCAATGAAGCCAAATCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAGCAGGCTGAGGGTGTGCAGCTGGTTAATGCAATATACACTATGTACAAATTCTGGTTGATTTCATaGAGCCATCGCTTGACGTTG | + |
|
Preference number: 2 (lower is better) Translates to: PEQAEGVQLVNAIYTMYKFWLIS*SHRLTL Trigger: CAACGTCAAGCGATGGCTTCATGAAATCAACCAGAA...TTTGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR-3UTR CCA 90 bp | AACACATTATGTGTCCAAATCAGTTCTTCTGAGTTACGTGATCCTTCAGGGGAAACTTTCTTTCTCCAGTaGGAGGCCCTCGAGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: NTLCVQISSSELRDPSGETFFLQ*EALEHT Trigger: TGTGTGCTCGAGGGCCTCCCACTGGAGAAAGAAAGT...TTCCCCTGAAGGATCACGTAACTCAGAAGAACTGATTTGGACACATAATGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR TCA 90 bp | TATACACTATGTACAAACTGGTTAATCAGTCCACTCAGCTGGCAGCGTCCTCACGTTTACTGTTTTTGGTaGGCTTCACCACATCGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: YTLCTNWLISPLSWQRPHVYCFW*ASPHRS Trigger: AGAACGATGTGGTGAAGCTCACCAAAAACAGTAAAC...GTGAGGACGCTGCCAGCTGAGTGGACTGATTAACCAGTTTGTACATAGTGTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGCAGGCTGAGGGTGTGCAGCTGGTTAATGCAATATACACTATGTACAAACCTGAGGGTGTGCAGCTaGTTAATGCAATATACACTA | + |
|
Preference number: 2 (lower is better) Translates to: QSRLRVCSWLMQYTLCTNLRVCS*LMQYTL Trigger: TAGTGTATATTGCATTAACCAGCTGCACACCCTCAG...GTTTGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
||
| 3UTR CAA 90 bp | ATCGTGAGGAACTTAGTTCATTTGATTTGGCTTCATTGGCTGTATTaGTTAAAATGCTCCTCCTTGCGAGCTCCGTCTCTTTACAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: IVRNLVHLIWLHWLY*LKCSSLRAPSLYRC Trigger: ACATCTGTAAAGAGACGGAGCTCGCAAGGAGGAGCATTTTAACAAATACAGCCAATGAAGCCAAATCAAATGAACTAAGTTCCTCACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CAA 90 bp | CAAGGAAATAATCGTGAGGAACTTAGTTCATTTGATTTGGCTTCATaGGCTGTATTTGTTAAAATGCTCCTCCTTGCGAGCTCCGTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: QGNNREELSSFDLAS*AVFVKMLLLASSVS Trigger: AGAGACGGAGCTCGCAAGGAGGAGCATTTTAACAAATACAGCCAATGAAGCCAAATCAAATGAACTAAGTTCCTCACGATTATTTCCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CAA 90 bp | ACCTTTTCTAAAAATACTGAGCCCGATGTGGGACAGTCATATCTTTaGCTATTGAGCCAATCAGATCTCAAGGAAATAATCGTGAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: TFSKNTEPDVGQSYL*LLSQSDLKEIIVRN Trigger: GTTCCTCACGATTATTTCCTTGAGATCTGATTGGCTCAATAGCAAAAGATATGACTGTCCCACATCGGGCTCAGTATTTTTAGAAAAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR CCA 90 bp | GTCATATCTTTTGCTATTGAGCCAATCAGATCTCAAGGAAATAATCGTGAGGAACTGAGGGTGTGCAGCTaGTTAATGCAATATACACTA | + |
|
Preference number: 2 (lower is better) Translates to: VISFAIEPIRSQGNNREELRVCS*LMQYTL Trigger: TAGTGTATATTGCATTAACCAGCTGCACACCCTCAG...TTCCTCACGATTATTTCCTTGAGATCTGATTGGCTCAATAGCAAAAGATATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CCA 72 bp | CCAGGTCCATGCGCCTCGGCAGGGAAGAGGGCACCGTaGGGAAGGGCGGGCTCGTCCAACACCTTCTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PGPCASAGKRAP*GRAGSSNTFLA Trigger: TGCCAAGAAGGTGTTGGACGAGCCCGCCCTTCCCCACGGTGCCCTCTTCCCTGCCGAGGCGCATGGACCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
||
| 3UTR CCA 72 bp | ACACGAGGTTGGCTCCTCCGGAAGCTGCCGTCGAGCTaGGACGGAGGGCTGGGGAGGGTCTGTTGCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TRGWLLRKLPSS*DGGLGRVCCSR Trigger: CCTGCTGCAACAGACCCTCCCCAGCCCTCCGTCCCAGCTCGACGGCAGCTTCCGGAGGAGCCAACCTCGTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR GCA 72 bp | CCAGAACAACAGGCCCTGGGTCAGCCAAGGCAGGCCTaGAGACAGTCTCTGCCTCAACTCCCAGCTCACCGG | + |
|
Preference number: 3 (lower is better) Translates to: PEQQALGQPRQA*RQSLPQLPAHR Trigger: CCGGTGAGCTGGGAGTTGAGGCAGAGACTGTCTGCAGGCCTGCCTTGGCTGACCCAGGGCCTGTTGTTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR TCA 72 bp | CAAAAGGGCAGGACTGAGTTCCTCTGTGGAAGGAACTaGAGGCCTAGCGGCCAGCAGAGGGCAGGGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QKGRTEFLCGRN*RPSGQQRAGPV Trigger: CACAGGCCCTGCCCTCTGCTGGCCGCTAGGCCTTCAGTTCCTTCCACAGAGGAACTCAGTCCTGCCCTTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CCA 72 bp | CCCAGCTCCCAGAGCAGCTGTAGGGTAGGAGCCATGTaGAGTGCACTCCATGGGCCAGGGATGAATGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PSSQSSCRVGAM*SALHGPGMNGQ Trigger: TTGGCCATTCATCCCTGGCCCATGGAGTGCACTCCACATGGCTCCTACCCTACAGCTGCTCTGGGAGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CCA 72 bp | GGCCTCAGGCTGGGAGGGATGCAGTGCAGTCTCTGCTaGGGCTGGGGCATTAGCAGCAGCGTTTCTTTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: GLRLGGMQCSLC*GWGISSSVSFV Trigger: AACGAAAGAAACGCTGCTGCTAATGCCCCAGCCCCAGCAGAGACTGCACTGCATCCCTCCCAGCCTGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR GCA 72 bp | AGCCCAGCAACCCCTGGCTCTGGCACAGGCGCCTGGTaGTACATTACAGACTTTCTTTCTCCAGTGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SPATPGSGTGAW*YITDFLSPVGG Trigger: GCCTCCCACTGGAGAAAGAAAGTCTGTAATGTAGCACCAGGCGCCTGTGCCAGAGCCAGGGGTTGCTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR GCA 72 bp | GTAATGCAAAAACCACCAGTCGGTCCCAGCTTGAGGTaGCTTCCCAGAGCCCAGCAACCCCTGGCTCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VMQKPPVGPSLR*LPRAQQPLALA Trigger: TGCCAGAGCCAGGGGTTGCTGGGCTCTGGGAAGGCACCTCAAGCTGGGACCGACTGGTGGTTTTTGCATTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CCA 72 bp | AGCCATGTGGAGTGCACTCCATGGGCCAGGGATGAATaGCCAAAGACTCGGCTAGGACACGAGGTTGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SHVECTPWARDE*PKTRLGHEVGS Trigger: GGAGCCAACCTCGTGTCCTAGCCGAGTCTTTGGCCATTCATCCCTGGCCCATGGAGTGCACTCCACATGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CCA 72 bp | CAGAGCCCAGCAACCCCTGGCTCTGGCACAGGCGCCTaGTGCTACATTACAGACTTTCTTTCTCCAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QSPATPGSGTGA*CYITDFLSPVG Trigger: TCCCACTGGAGAAAGAAAGTCTGTAATGTAGCACCAGGCGCCTGTGCCAGAGCCAGGGGTTGCTGGGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR TCA 72 bp | ACCACCCAGGCCTTAACAGGCTGGTGCCAGAAGCCATaGAGGCATCCAACTTGGGCTGATGCTCCGAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: TTQALTGWCQKP*RHPTWADAPRS Trigger: TGATCTCGGAGCATCAGCCCAAGTTGGATGCCTTCATGGCTTCTGGCACCAGCCTGTTAAGGCCTGGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR GCA 72 bp | CATCCTGGCTTCCCATGTGTTCAGAAGCATGTCACTTaGCCAGAACAACAGGCCCTGGGTCAGCCAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HPGFPCVQKHVT*PEQQALGQPRQ Trigger: CTGCCTTGGCTGACCCAGGGCCTGTTGTTCTGGGCAAGTGACATGCTTCTGAACACATGGGAAGCCAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CCA 72 bp | CACACAGGTATGAGGGTGCAAAGCCAGCCTTTCCCATaGAAGGGAGAGCGCCTAGCCCTGCACTCAACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HTGMRVQSQPFP*KGERLALHSTE Trigger: TTCTGTTGAGTGCAGGGCTAGGCGCTCTCCCTTCCATGGGAAAGGCTGGCTTTGCACCCTCATACCTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CCA 72 bp | GCGCCTGGTGCTACATTACAGACTTTCTTTCTCCAGTaGGAGGCCCTCGAGCACACAGGTATGAGGGTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: APGATLQTFFLQ*EALEHTGMRVQ Trigger: TTGCACCCTCATACCTGTGTGCTCGAGGGCCTCCCACTGGAGAAAGAAAGTCTGTAATGTAGCACCAGGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR CCA 72 bp | AGTCTCTGCCTCAACTCCCAGCTCACCGGAACCATGTaGAGTCGCCTAATGCTTGACCCTGAAGTGTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLCLNSQLTGTM*SRLMLDPEVSS Trigger: GGAAGACACTTCAGGGTCAAGCATTAGGCGACTCCACATGGTTCCGGTGAGCTGGGAGTTGAGGCAGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR CAA 90 bp | TACACTATGTACAAACTGGTTAATCAGTCCACTCAGCTGGCAGCGTCCTCACCAGCTGGGGAGGGTCTGTaGCAGCAGGTTGGCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: YTMYKLVNQSTQLAASSPAGEGL*QQVGRK Trigger: CTTCCTGCCAACCTGCTGCAACAGACCCTCCCCAGC...TGGTGAGGACGCTGCCAGCTGAGTGGACTGATTAACCAGTTTGTACATAGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCTTTCCCATGGAAGGGAGAGCGCCTAGCCCTGCACTCAACAGAAGCCATAGAATGAGAAACCTGTaGTCCAAAAGGGCAGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: PAFPMEGRAPSPALNRSHRMRNL*SKRAGL Trigger: CAGTCCTGCCCTTTTGGACAACAGGTTTCTCATTCT...ATGGCTTCTGTTGAGTGCAGGGCTAGGCGCTCTCCCTTCCATGGGAAAGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTGCTGGGGCTGGGGCATTAGCAGCAGCGTTTCTTTCGTTTACTGTTTTTTCGTCCAACACCTTCTaGGCACTCAAGGGGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSAGAGALAAAFLSFTVFSSNTF*ALKGKR Trigger: CCTTTTCCCCTTGAGTGCCAAGAAGGTGTTGGACGA...AAAAACAGTAAACGAAAGAAACGCTGCTGCTAATGCCCCAGCCCCAGCAGAGAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCGAGAATTCTTTAAATAACGGCACTAAACTGAGACTGTCCCCCGAGGCCTCCCACATCGTTCTGTTGTaGCTGCTGCTGTTTCGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GENSLNNGTKLRLSPEASHIVLL*LLLFRQ Trigger: TTGGCGAAACAGCAGCAGCAACAACAGAACGATGTG...GGAGGCCTCGGGGGACAGTCTCAGTTTAGTGCCGTTATTTAAAGAATTCTCGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCAAATTTGTAGGCATCTTCTGTCTCTACCACCTTCCGCTCAGGGTCATCATTAGCCATCGCTTGACGTaGACAAAGGACTCGGCACTA | + |
|
Preference number: 3 (lower is better) Translates to: GKFVGIFCLYHLPLRVIISHRLT*TKDSAL Trigger: TAGTGCCGAGTCCTTTGTCAACGTCAAGCGATGGCT...AATGATGACCCTGAGCGGAAGGTGGTAGAGACAGAAGATGCCTACAAATTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR TCA 72 bp | CTTGGGCTGATGCTCCGAGATCACCCTTTTATTGCTTaGATTGGCAAACACTCCCATCCTGGCTTCCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: LGLMLRDHPFIA*IGKHSHPGFPC Trigger: ACATGGGAAGCCAGGATGGGAGTGTTTGCCAATTCAAGCAATAAAAGGGTGATCTCGGAGCATCAGCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGATGTCCCACTACCTTTCTGCGGGAACTGAAACATGTTGGGTAAGTGAGTCGTCCAACACCTTCTaGGCACTCAAGGGGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQMSHYLSAGTETCWVSESSNTF*ALKGKR Trigger: CCTTTTCCCCTTGAGTGCCAAGAAGGTGTTGGACGA...CTCACTTACCCAACATGTTTCAGTTCCCGCAGAAAGGTAGTGGGACATCTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR-3UTR CAA 90 bp | TACACTATGTACAAACTGGTTAATCAGTCCACTCAGCTGGCAGCGTCCTCACCAACATTGACGTTCTCCTaGGCACTGGTCTCAAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: YTMYKLVNQSTQLAASSPTLTFS*ALVSKS Trigger: GCTCTTTGAGACCAGTGCCAAGGAGAACGTCAATGT...TGGTGAGGACGCTGCCAGCTGAGTGGACTGATTAACCAGTTTGTACATAGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR CCA 72 bp | CCCTTTTATTGCTTGAATTGGCAAACACTCCCATCCTaGCTTCCCATGTGTTCAGAAGCATGTCACTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PFYCLNWQTLPS*LPMCSEACHLP Trigger: GGGCAAGTGACATGCTTCTGAACACATGGGAAGCCAGGATGGGAGTGTTTGCCAATTCAAGCAATAAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
||
| 3UTR GCA 72 bp | TTTTTGGTGAGCTTCACCACATCGTTCTGTTGTTGCTaGTGCTGTTTCGCCAAGTTGTCTTTCTTTGCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: FLVSFTTSFCCC*CCFAKLSFFAR Trigger: GCGAGCAAAGAAAGACAACTTGGCGAAACAGCAGCAGCAACAACAGAACGATGTGGTGAAGCTCACCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR GCA 72 bp | CTGTTTTTGGTGAGCTTCACCACATCGTTCTGTTGTTaGTGCTGCTGTTTCGCCAAGTTGTCTTTCTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LFLVSFTTSFCC*CCCFAKLSFFA Trigger: AGCAAAGAAAGACAACTTGGCGAAACAGCAGCAGCAACAACAGAACGATGTGGTGAAGCTCACCAAAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
||
| 3UTR CCA 72 bp | TGCAGCTGGTTAATGCAATATACACTATGTACAAACTaGTTAATCAGTCCACTCAGCTGGCAGCGTCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CSWLMQYTLCTN*LISPLSWQRPH Trigger: GTGAGGACGCTGCCAGCTGAGTGGACTGATTAACCAGTTTGTACATAGTGTATATTGCATTAACCAGCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
||
| 3UTR TCA 72 bp | ATTAGCAGCAGCGTTTCTTTCGTTTACTGTTTTTGGTaGGCTTCACCACATCGTTCTGTTGTTGCTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ISSSVSFVYCFW*ASPHRSVVAAA Trigger: AGCAGCAGCAACAACAGAACGATGTGGTGAAGCTCACCAAAAACAGTAAACGAAAGAAACGCTGCTGCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| 3UTR GCA 72 bp | CATTTGATTTGGCTTCATTGGCTGTATTTGTTAAAATaGTCCTCCTTGCGAGCTCCGTCTCTTTACAGATGT | + |
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Preference number: 3 (lower is better) Translates to: HLIWLHWLYLLK*SSLRAPSLYRC Trigger: ACATCTGTAAAGAGACGGAGCTCGCAAGGAGGAGCATTTTAACAAATACAGCCAATGAAGCCAAATCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR TCA 90 bp | CTCACCAGGTCCATGCGCCTCGGCAGGGAAGAGGGCACCGTGGGGAAGGGCGGGCCACAGTCCGAATCTTaGAATCCACTCCGATTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LTRSMRLGREEGTVGKGGPQSES*NPLRLW Trigger: CCACAATCGGAGTGGATTTCAAGATTCGGACTGTGG...CCCGCCCTTCCCCACGGTGCCCTCTTCCCTGCCGAGGCGCATGGACCTGGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| CDS-3UTR TCA 90 bp | ATCAGTCCACTCAGCTGGCAGCGTCCTCACCAGGTCCATGCGCCTCGGCAGGGATCACCTTCTCCCCGTTaGTCTCCACAGTCCGAATCT | + |
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Preference number: 4 (lower is better) Translates to: ISPLSWQRPHQVHAPRQGSPSPR*SPQSES Trigger: AGATTCGGACTGTGGAGATCAACGGGGAGAAGGTGA...TCCCTGCCGAGGCGCATGGACCTGGTGAGGACGCTGCCAGCTGAGTGGACTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| CDS-3UTR GCA 90 bp | CGGGCCCACCAGGGTACCAGTGTAGCCCTGATTCTCCCACCCTTATCCCCACCCACATCGTTCTGTTGTTaGTGCTGCTGTTTCGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RAHQGTSVALILPPLSPPTSFCC*CCCFAK Trigger: CTTGGCGAAACAGCAGCAGCAACAACAGAACGATGT...GGGTGGGGATAAGGGTGGGAGAATCAGGGCTACACTGGTACCCTGGTGGGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR GCA 90 bp | GTGTGGAGCCAGGTTCCCAGCTCCCAGAGCAGCTGTAGGGTAGGAGCCATGTGGTCGTTCTGTTGTTGCTaGTGCTGTTTCGCCAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: VWSQVPSSQSSCRVGAMWSFCCC*CCFAKL Trigger: CAACTTGGCGAAACAGCAGCAGCAACAACAGAACGA...CCACATGGCTCCTACCCTACAGCTGCTCTGGGAGCTGGGAACCTGGCTCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CAA 72 bp | CCATCCTGGCTTCCCATGTGTTCAGAAGCATGTCACTaGCCCAGAACAACAGGCCCTGGGTCAGCCAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: PSWLPMCSEACH*PRTTGPGSAKA Trigger: TGCCTTGGCTGACCCAGGGCCTGTTGTTCTGGGCAAGTGACATGCTTCTGAACACATGGGAAGCCAGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR TCA 90 bp | CCTTTCCCATGGAAGGGAGAGCGCCTAGCCCTGCACTCAACAGAAGCCATACACCCACAGTCCGAATCTTaGAATCCACTCCGATTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PFPWKGERLALHSTEAIHPQSES*NPLRLW Trigger: CCACAATCGGAGTGGATTTCAAGATTCGGACTGTGG...GTGTATGGCTTCTGTTGAGTGCAGGGCTAGGCGCTCTCCCTTCCATGGGAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR TCA 90 bp | GGCGAGAATTCTTTAAATAACGGCACTAAACTGAGACTGTCCCCCGAGGCCTCCCCACTCCGATTGTGGTaGTGTAGCTGCCTGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GENSLNNGTKLRLSPEASPLRLW*CSCLRR Trigger: CCTTCTCAGGCAGCTACATCACCACAATCGGAGTGG...GGAGGCCTCGGGGGACAGTCTCAGTTTAGTGCCGTTATTTAAAGAATTCTCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR GCA 90 bp | CCAGCCTTTCCCATGGAAGGGAGAGCGCCTAGCCCTGCACTCAACAGAAGCCATTTCTGTTGTTGCTGCTaGTGTTTCGCCAAGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: PAFPMEGRAPSPALNRSHFCCCC*CFAKLS Trigger: AGACAACTTGGCGAAACAGCAGCAGCAACAACAGAA...ATGGCTTCTGTTGAGTGCAGGGCTAGGCGCTCTCCCTTCCATGGGAAAGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR GCA 90 bp | GACGTTGACAAAGGACTCGGCACTAGTGACGTCGTAAACCACAATGACCCCATGATCGTAACAGCAAGCTaGTCTTGCCCACACCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DVDKGLGTSDVVNHNDPMIVTAS*SCPHRC Trigger: ACAGCGGTGTGGGCAAGAGCAGCTTGCTGTTACGAT...CATGGGGTCATTGTGGTTTACGACGTCACTAGTGCCGAGTCCTTTGTCAACGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138885.2 |
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| CDS-3UTR TCA 90 bp | ATTTGGCTTCATTGGCTGTATTTGTTAAAATGCTCCTCCTTGCGAGCTCCGTCTCGTCGTAAACCACAATaGCCCCATGGGTCCCCCGAT | + |
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Preference number: 4 (lower is better) Translates to: IWLHWLYLLKCSSLRAPSRRKPQ*PHGSPD Trigger: ATCGGGGGACCCATGGGGTCATTGTGGTTTACGACG...AGACGGAGCTCGCAAGGAGGAGCATTTTAACAAATACAGCCAATGAAGCCAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR CCA 90 bp | ATTTGGCTTCATTGGCTGTATTTGTTAAAATGCTCCTCCTTGCGAGCTCCGTCTCTGGTCTCAAAGAGCTaGATCCCCATCTGCCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: IWLHWLYLLKCSSLRAPSLVSKS*IPICPA Trigger: TGCCGGGCAGATGGGGATCCAGCTCTTTGAGACCAG...AGACGGAGCTCGCAAGGAGGAGCATTTTAACAAATACAGCCAATGAAGCCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR TCA 90 bp | CCAGAGCAGGCTGAGGGTGTGCAGCTGGTTAATGCAATATACACTATGTACAAACGTCACAGTTCTGGTTaGTTTCATGAAGCCATCGCT | + |
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Preference number: 4 (lower is better) Translates to: PEQAEGVQLVNAIYTMYKRHSSG*FHEAIA Trigger: AGCGATGGCTTCATGAAATCAACCAGAACTGTGACG...TTTGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CAA 72 bp | TGGCTTCATTGGCTGTATTTGTTAAAATGCTCCTCCTaGCGAGCTCCGTCTCTTTACAGATGTCCCACTACC | + |
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Preference number: 4 (lower is better) Translates to: WLHWLYLLKCSS*RAPSLYRCPTT Trigger: GGTAGTGGGACATCTGTAAAGAGACGGAGCTCGCAAGGAGGAGCATTTTAACAAATACAGCCAATGAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR GCA 90 bp | AACACATTATGTGTCCAAATCAGTTCTTCTGAGTTACGTGATCCTTCAGGGGAAATCGTAACAGCAAGCTaGTCTTGCCCACACCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NTLCVQISSSELRDPSGEIVTAS*SCPHRC Trigger: ACAGCGGTGTGGGCAAGAGCAGCTTGCTGTTACGAT...TTCCCCTGAAGGATCACGTAACTCAGAAGAACTGATTTGGACACATAATGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CAA 72 bp | ACTGAGCCCGATGTGGGACAGTCATATCTTTTGCTATaGAGCCAATCAGATCTCAAGGAAATAATCGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TEPDVGQSYLLL*SQSDLKEIIVR Trigger: CCTCACGATTATTTCCTTGAGATCTGATTGGCTCAATAGCAAAAGATATGACTGTCCCACATCGGGCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR TCA 90 bp | GTCATATCTTTTGCTATTGAGCCAATCAGATCTCAAGGAAATAATCGTGAGGAATCACCTTCTCCCCGTTaGTCTCCACAGTCCGAATCT | + |
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Preference number: 4 (lower is better) Translates to: VISFAIEPIRSQGNNREESPSPR*SPQSES Trigger: AGATTCGGACTGTGGAGATCAACGGGGAGAAGGTGA...TTCCTCACGATTATTTCCTTGAGATCTGATTGGCTCAATAGCAAAAGATATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR GCA 90 bp | CAGAGCAGGCTGAGGGTGTGCAGCTGGTTAATGCAATATACACTATGTACAAACGGTCATCATTCTTATTaGCCACTAATATTCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: QSRLRVCSWLMQYTLCTNGHHSY*PLIFGT Trigger: TGTGCCGAATATTAGTGGGCAATAAGAATGATGACC...GTTTGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR TCA 90 bp | AACACATTATGTGTCCAAATCAGTTCTTCTGAGTTACGTGATCCTTCAGGGGAATTCTGGTTGATTTCATaGAGCCATCGCTTGACGTTG | + |
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Preference number: 4 (lower is better) Translates to: NTLCVQISSSELRDPSGEFWLIS*SHRLTL Trigger: CAACGTCAAGCGATGGCTTCATGAAATCAACCAGAA...TTCCCCTGAAGGATCACGTAACTCAGAAGAACTGATTTGGACACATAATGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR TCA 90 bp | TGGTTAATGCAATATACACTATGTACAAACTGGTTAATCAGTCCACTCAGCTGGGTTTACTGTTTTTGGTaGGCTTCACCACATCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: WLMQYTLCTNWLISPLSWVYCFW*ASPHRS Trigger: AGAACGATGTGGTGAAGCTCACCAAAAACAGTAAAC...CCAGCTGAGTGGACTGATTAACCAGTTTGTACATAGTGTATATTGCATTAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| 3UTR CAA 72 bp | AAAAATACTGAGCCCGATGTGGGACAGTCATATCTTTaGCTATTGAGCCAATCAGATCTCAAGGAAATAATC | + |
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Preference number: 4 (lower is better) Translates to: KNTEPDVGQSYL*LLSQSDLKEII Trigger: GATTATTTCCTTGAGATCTGATTGGCTCAATAGCAAAAGATATGACTGTCCCACATCGGGCTCAGTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR CAA 90 bp | GGCAGGCCTGCAGACAGTCTCTGCCTCAACTCCCAGCTCACCGGAACCATGTGGAGCCATCGCTTGACGTaGACAAAGGACTCGGCACTA | + |
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Preference number: 5 (lower is better) Translates to: GRPADSLCLNSQLTGTMWSHRLT*TKDSAL Trigger: TAGTGCCGAGTCCTTTGTCAACGTCAAGCGATGGCT...CCACATGGTTCCGGTGAGCTGGGAGTTGAGGCAGAGACTGTCTGCAGGCCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR CAA 90 bp | CGGGCCCACCAGGGTACCAGTGTAGCCCTGATTCTCCCACCCTTATCCCCACCCTGCTGTTTCGCCAAGTaGTCTTTCTTTGCTCGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RAHQGTSVALILPPLSPPCCFAK*SFFARR Trigger: TCTGCGAGCAAAGAAAGACAACTTGGCGAAACAGCA...GGGTGGGGATAAGGGTGGGAGAATCAGGGCTACACTGGTACCCTGGTGGGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR CAA 90 bp | CCTTTCCCATGGAAGGGAGAGCGCCTAGCCCTGCACTCAACAGAAGCCATACACACATTGACGTTCTCCTaGGCACTGGTCTCAAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PFPWKGERLALHSTEAIHTLTFS*ALVSKS Trigger: GCTCTTTGAGACCAGTGCCAAGGAGAACGTCAATGT...GTGTATGGCTTCTGTTGAGTGCAGGGCTAGGCGCTCTCCCTTCCATGGGAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR CAA 90 bp | TTGCTTGAATTGGCAAACACTCCCATCCTGGCTTCCCATGTGTTCAGAAGCATGCCAAGTTGTCTTTCTTaGCTCGCAGAACCAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LLELANTPILASHVFRSMPSCLS*LAEPAL Trigger: CAGAGCTGGTTCTGCGAGCAAAGAAAGACAACTTGG...CATGCTTCTGAACACATGGGAAGCCAGGATGGGAGTGTTTGCCAATTCAAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR CAA 90 bp | TTGCTTGAATTGGCAAACACTCCCATCCTGGCTTCCCATGTGTTCAGAAGCATGCACATCGTTCTGTTGTaGCTGCTGCTGTTTCGCCAA | + |
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Preference number: 5 (lower is better) Translates to: LLELANTPILASHVFRSMHIVLL*LLLFRQ Trigger: TTGGCGAAACAGCAGCAGCAACAACAGAACGATGTG...CATGCTTCTGAACACATGGGAAGCCAGGATGGGAGTGTTTGCCAATTCAAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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| CDS-3UTR CAA 90 bp | AGCCAGAGCAGGCTGAGGGTGTGCAGCTGGTTAATGCAATATACACTATGTACATCCACAGTCCGAATCTaGAAATCCACTCCGATTGTG | + |
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Preference number: 5 (lower is better) Translates to: SQSRLRVCSWLMQYTLCTSTVRI*KSTPIV Trigger: CACAATCGGAGTGGATTTCAAGATTCGGACTGTGGA...TGTACATAGTGTATATTGCATTAACCAGCTGCACACCCTCAGCCTGCTCTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031492.15 ENSMUST00000138885.2 |
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| CDS-3UTR CAA 90 bp | AACACATTATGTGTCCAAATCAGTTCTTCTGAGTTACGTGATCCTTCAGGGGAATCCACAGTCCGAATCTaGAAATCCACTCCGATTGTG | + |
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Preference number: 5 (lower is better) Translates to: NTLCVQISSSELRDPSGESTVRI*KSTPIV Trigger: CACAATCGGAGTGGATTTCAAGATTCGGACTGTGGA...TTCCCCTGAAGGATCACGTAACTCAGAAGAACTGATTTGGACACATAATGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031492.15 |
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