Pregenerated sensors for RAB34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002059Ensembl transcript IDs: ENSMUST00000002128.14, ENSMUST00000056241.12, ENSMUST00000108322.9, ENSMUST00000150941.8, ENSMUST00000156435.2, ENSMUST00000207728.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTaGGGGCAGCAAATGACTAGCATGGTCCCTGTCACCTTCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: EPQRNRGSSSLWHGA*GQQMTSMVPVTFWG Trigger: CCCCCAGAAGGTGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR CCA 90 bp | AGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTaGCATGGTGCCTGGGGGCAGCAAATGACTAGCATGGTCCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: RHPGEPQRNRGSSSL*HGAWGQQMTSMVPV Trigger: GACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCCCTGGGGGCAGCAAATaGCTAGCATGGTCCCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: CPSPGTLESPRGTEGHPVPGGSK*LAWSLS Trigger: TGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGG...GACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCCCTGTCACCTTCTaGGGGGCACTGACATCAATG | + |
|
Preference number: 2 (lower is better) Translates to: HCPSPGTLESPRGTEGHPVPVTF*GALTSM Trigger: CATTGATGTCAGTGCCCCCCAGAAGGTGACAGGGAC...TGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCAAATGTCCAGGGGTTaGGTTCTGGAGCAGTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPLTRHPGEPQRNRGSSSQMSRG*VLEQLQ Trigger: CTGCAACTGCTCCAGAACTCAACCCCTGGACATTTG...ACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAACAAATGTCCAGGGGTTaGGTTCTGGAGCAGTTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PRGTEGHPVFGMVPGGSKQMSRG*VLEQLQ Trigger: CTGCAACTGCTCCAGAACTCAACCCCTGGACATTTG...TTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAATGACTCAAATGTCCAGGGGTTaGGTTCTGGAGCAGTTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RNRGSSSLWHGAWGQQMTQMSRG*VLEQLQ Trigger: CTGCAACTGCTCCAGAACTCAACCCCTGGACATTTG...AGTCATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGATAGCTCTTTGGTCTaGAAAAAGTCAGTGCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: HCPSPGTLESPRGTEGHPDSSLV*KKSVQM Trigger: CATTTGCACTGACTTTTTCCAGACCAAAGAGCTATC...TGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCCAATGGATAGCTCTTTaGTCTGGAAAAAGTCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: HPGEPQRNRGSSSLWHGAQWIAL*SGKSQC Trigger: GCACTGACTTTTTCCAGACCAAAGAGCTATCCATTG...GGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAACAATGGATAGCTCTTTaGTCTGGAAAAAGTCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PRGTEGHPVFGMVPGGSKQWIAL*SGKSQC Trigger: GCACTGACTTTTTCCAGACCAAAGAGCTATCCATTG...TTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGCATGGTGCCTGGGGGCAGCAAATGACTAGCATGGTCCCTGTCACCTTCGATAGCTCTTTGGTCTaGAAAAAGTCAGTGCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: LWHGAWGQQMTSMVPVTFDSSLV*KKSVQM Trigger: CATTTGCACTGACTTTTTCCAGACCAAAGAGCTATC...GAAGGTGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR CCA 72 bp | AGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTaGGGGCAGCAAATGACTAGCATGGTCCCTGTCACC | + |
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Preference number: 3 (lower is better) Translates to: RNRGSSSLWHGA*GQQMTSMVPVT Trigger: GGTGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR CAA 90 bp | CACTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCATCAATGGATAGCTCTTaGGTCTGGAAAAAGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: HCPSPGTLESPRGTEGHPSMDSS*VWKKSV Trigger: CACTGACTTTTTCCAGACCAAAGAGCTATCCATTGA...TGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTCAATGGATAGCTCTTaGGTCTGGAAAAAGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CPSPGTLESPRGTEGHPVSMDSS*VWKKSV Trigger: CACTGACTTTTTCCAGACCAAAGAGCTATCCATTGA...GACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR CAA 90 bp | CACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTCAATGGATAGCTCTTaGGTCTGGAAAAAGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HPGEPQRNRGSSSLWHGASMDSS*VWKKSV Trigger: CACTGACTTTTTCCAGACCAAAGAGCTATCCATTGA...GGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR TCA 72 bp | TTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTaGGTTCTGGAGCAGTTGCAGGTAGCACGGTACCCC | + |
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Preference number: 3 (lower is better) Translates to: LVWKKSVQMSRG*VLEQLQVARYP Trigger: GGGGTACCGTGCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTGGCATGGTGCCTGGGGGCAGCAAATGACTAGCATGGTCCCTGTCACCTTCTCAATGGATAGCTCTTaGGTCTGGAAAAAGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LWHGAWGQQMTSMVPVTFSMDSS*VWKKSV Trigger: CACTGACTTTTTCCAGACCAAAGAGCTATCCATTGA...GAAGGTGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CCA 90 bp | CACTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCACCTGTCCGGTGCTCCTaGCAGGCGCAAGTGACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HCPSPGTLESPRGTEGHPPVRCS*QAQVTR Trigger: CCGCGTCACTTGCGCCTGCCAGGAGCACCGGACAGG...TGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR TCA 90 bp | TGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCCCTGGCAGGCGCAAGTaGCGCGGGGGTGGAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CPSPGTLESPRGTEGHPVPGRRK*RGGGSL Trigger: AAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGG...GACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CCA 90 bp | CACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCCCTGTCCGGTGCTCCTaGCAGGCGCAAGTGACGCGG | + |
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Preference number: 4 (lower is better) Translates to: HPGEPQRNRGSSSLWHGAPVRCS*QAQVTR Trigger: CCGCGTCACTTGCGCCTGCCAGGAGCACCGGACAGG...GGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR TCA 90 bp | TGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCGGACATTCTCACCAGTaGGGGAGGACACCGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPSPGTLESPRGTEGHPVGHSHQ*GRTPPS Trigger: ACTGGGCGGTGTCCTCCCTCACTGGTGAGAATGTCC...GACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR GCA 90 bp | AGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: RAPEEQRVIQSLAWCLGATVPVR*SWQAQV Trigger: CACTTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...TGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CCA 90 bp | GCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTCTTTCTTCAGGCACTaGGGCAGCTCCGCCAGGACG | + |
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Preference number: 4 (lower is better) Translates to: APHQAPWRAPEEQRVIQSSFFRH*GSSART Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAAGAAAGA...AGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CCA 90 bp | CTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCAAGTGACGCGGGGGTaGAAGTCTTTGCGCACGTGC | + |
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Preference number: 4 (lower is better) Translates to: LPLTRHPGEPQRNRGSSSQVTRG*KSLRTC Trigger: GCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTG...ACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAATCCTGTCCGGTGCTCCTaGCAGGCGCAAGTGACGCGG | + |
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Preference number: 4 (lower is better) Translates to: PEEQRVIQSLAWCLGAANPVRCS*QAQVTR Trigger: CCGCGTCACTTGCGCCTGCCAGGAGCACCGGACAGG...ATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR TCA 90 bp | AGTCTTTGGCATGGTGCCTGGGGGCAGCAAATGACTAGCATGGTCCCTGTCACCCCTGGCAGGCGCAAGTaGCGCGGGGGTGGAAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SLWHGAWGQQMTSMVPVTPGRRK*RGGGSL Trigger: AAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGG...GGTGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR TCA 90 bp | CACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCGGACATTCTCACCAGTaGGGGAGGACACCGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HPGEPQRNRGSSSLWHGAGHSHQ*GRTPPS Trigger: ACTGGGCGGTGTCCTCCCTCACTGGTGAGAATGTCC...GGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR GCA 90 bp | CCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAATACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: PEEQRVIQSLAWCLGAANTVPVR*SWQAQV Trigger: CACTTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...ATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR GCA 90 bp | CTTTGGCATGGTGCCTGGGGGCAGCAAATGACTAGCATGGTCCCTGTCACCTTCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LWHGAWGQQMTSMVPVTFTVPVR*SWQAQV Trigger: CACTTGCGCCTGCCAGGAGCACCGGACAGGCACCGT...GAAGGTGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CCA 90 bp | GCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTCGGCCTTAATCTCTTaGGCCACCTTGAGGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: APHQAPWRAPEEQRVIQSSALIS*ATLRAS Trigger: GGATGCCCTCAAGGTGGCCCAAGAGATTAAGGCCGA...AGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CCA 90 bp | ACTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCGGCCTTAATCTCTTaGGCCACCTTGAGGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: TAPHQAPWRAPEEQRVIQSALIS*ATLRAS Trigger: GGATGCCCTCAAGGTGGCCCAAGAGATTAAGGCCGA...CTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CCA 90 bp | CTTTGGCATGGTGCCTGGGGGCAGCAAATGACTAGCATGGTCCCTGTCACCTTCTCTTTCTTCAGGCACTaGGGCAGCTCCGCCAGGACG | + |
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Preference number: 4 (lower is better) Translates to: LWHGAWGQQMTSMVPVTFSFFRH*GSSART Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAAGAAAGA...GAAGGTGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CCA 90 bp | AGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCTCCGCCAGGACATTaGCCTCAAAGGTTAGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RAPEEQRVIQSLAWCLGAAPPGH*PQRLVL Trigger: CAGCACTAACCTTTGAGGCCAATGTCCTGGCGGAGC...TGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR GCA 90 bp | AGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAATGACTGGGGGTGGAAGTCTTTaGGCACGTGCAAAGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RNRGSSSLWHGAWGQQMTGGGSL*ARAKRP Trigger: AGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCC...AGTCATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR GCA 90 bp | AGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGGTAGCACGGTACCCGGGGGTGGAAGTCTTTaGGCACGTGCAAAGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SANVQGLSSGAVAGSTVPGGGSL*ARAKRP Trigger: AGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCC...GGGTACCGTGCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CCA 90 bp | CTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTTACTCAGGTCCTTCTTaGAACCCACAAGGAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LPLTRHPGEPQRNRGSSSYSGPS*NPQGRG Trigger: TCCTCTTCCTTGTGGGTTCCAAGAAGGACCTGAGTA...ACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CCA 90 bp | TGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTACTCAGGTCCTTCTTaGAACCCACAAGGAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: CPSPGTLESPRGTEGHPVYSGPS*NPQGRG Trigger: TCCTCTTCCTTGTGGGTTCCAAGAAGGACCTGAGTA...GACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR GCA 90 bp | CACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCAAGTCTTTGCGCACGTaGAAAGCGGCCTCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HPGEPQRNRGSSSLWHGAKSLRT*KAASFF Trigger: GAAGAAAGAGGCCGCTTTGCACGTGCGCAAAGACTT...GGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR GCA 90 bp | CTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTATGTGGCCTTTTTCTTaGTGGCAGTTAGGTACAGGT | + |
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Preference number: 4 (lower is better) Translates to: LPLTRHPGEPQRNRGSSSMWPFS*WQLGTG Trigger: ACCTGTACCTAACTGCCAGCAAGAAAAAGGCCACAT...ACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CCA 90 bp | CTTTGGCATGGTGCCTGGGGGCAGCAAATGACTAGCATGGTCCCTGTCACCTTCTCGGCCTTAATCTCTTaGGCCACCTTGAGGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: LWHGAWGQQMTSMVPVTFSALIS*ATLRAS Trigger: GGATGCCCTCAAGGTGGCCCAAGAGATTAAGGCCGA...GAAGGTGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR TCA 90 bp | CTTTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTCCTGGCAGGCGCAAGTaGCGCGGGGGTGGAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWSGKSQCKCPGVEFWSSPGRRK*RGGGSL Trigger: AAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGG...ACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGGTAGCACGCAAGTGACGCGGGGGTaGAAGTCTTTGCGCACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVSANVQGLSSGAVAGSTQVTRG*KSLRTC Trigger: GCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTG...CGTGCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
||
| CDS-3UTR CCA 90 bp | AGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAATGACTGCTCCGCCAGGACATTaGCCTCAAAGGTTAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNRGSSSLWHGAWGQQMTAPPGH*PQRLVL Trigger: CAGCACTAACCTTTGAGGCCAATGTCCTGGCGGAGC...AGTCATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTGGCCTTTTTCTTGCTaGCAGTTAGGTACAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPSPGTLESPRGTEGHPVWPFSC*QLGTGF Trigger: AAAACCTGTACCTAACTGCCAGCAAGAAAAAGGCCA...GACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGGTAGCGGGGGTGGAAGTCTTTaGGCACGTGCAAAGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKVSANVQGLSSGAVAGSGGGSL*ARAKRP Trigger: AGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCC...GCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
||
| CDS-3UTR CCA 90 bp | GAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGGTAGCTCTTTCTTCAGGCACTaGGGCAGCTCCGCCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: EKVSANVQGLSSGAVAGSSFFRH*GSSART Trigger: CGTCCTGGCGGAGCTGCCCCAGTGCCTGAAGAAAGA...GCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
||
| CDS-3UTR TCA 90 bp | CTTTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTGGACATTCTCACCAGTaGGGGAGGACACCGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LWSGKSQCKCPGVEFWSSGHSHQ*GRTPPS Trigger: ACTGGGCGGTGTCCTCCCTCACTGGTGAGAATGTCC...ACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGGTAGCACGGCTCCGCCAGGACATTaGCCTCAAAGGTTAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVSANVQGLSSGAVAGSTAPPGH*PQRLVL Trigger: CAGCACTAACCTTTGAGGCCAATGTCCTGGCGGAGC...CGTGCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCATGGCCTTTTTCTTGCTaGCAGTTAGGTACAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAPEEQRVIQSLAWCLGAWPFSC*QLGTGF Trigger: AAAACCTGTACCTAACTGCCAGCAAGAAAAAGGCCA...TGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGGTAGCACGGCTCCGCCAGGACATTaGCCTCAAAGGTTAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVSANVQGLSSGAVAGSTAPPGH*PQRLVQ Trigger: CTGCACTAACCTTTGAGGCCAATGTCCTGGCGGAGC...CGTGCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156435.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTTTGGCATGGTGCCTGGGGGCAGCAAATGACTAGCATGGTCCCTGTCACCATGTGGCCTTTTTCTTaGTGGCAGTTAGGTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLWHGAWGQQMTSMVPVTMWPFS*WQLGTG Trigger: ACCTGTACCTAACTGCCAGCAAGAAAAAGGCCACAT...GGTGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAATGGCCTTTTTCTTGCTaGCAGTTAGGTACAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRGTEGHPVFGMVPGGSKWPFSC*QLGTGF Trigger: AAAACCTGTACCTAACTGCCAGCAAGAAAAAGGCCA...TTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCTCTCTTGGGCCACCTTaGGGGCATCCTTCTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: WSGKSQCKCPGVEFWSSCSLGPP*GHPSPL Trigger: TAATGGAGAAGGATGCCCTCAAGGTGGCCCAAGAGA...GCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTCGGCCTTAATCTCTTaGGCCACCTTGAGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LWSGKSQCKCPGVEFWSSSALIS*ATLRAS Trigger: GGATGCCCTCAAGGTGGCCCAAGAGATTAAGGCCGA...ACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR TCA 90 bp | CTTTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTCTCTTGGGCCACCTTaGGGGCATCCTTCTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LWSGKSQCKCPGVEFWSSSLGPP*GHPSPL Trigger: TAATGGAGAAGGATGCCCTCAAGGTGGCCCAAGAGA...ACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGGTAGCAAGTCTTTGCGCACGTaGAAAGCGGCCTCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EKVSANVQGLSSGAVAGSKSLRT*KAASFF Trigger: GAAGAAAGAGGCCGCTTTGCACGTGCGCAAAGACTT...GCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCATACTCAGGTCCTTCTTaGAACCCACAAGGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLEKVSANVQGLSSGAVAYSGPS*NPQGRG Trigger: TCCTCTTCCTTGTGGGTTCCAAGAAGGACCTGAGTA...TGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR GCA 90 bp | GGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAATGTGGCCTTTTTCTTaGTGGCAGTTAGGTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLEKVSANVQGLSSGAVAMWPFS*WQLGTG Trigger: ACCTGTACCTAACTGCCAGCAAGAAAAAGGCCACAT...TGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTATGTGGCCTTTTTCTTaGTGGCAGTTAGGTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWSGKSQCKCPGVEFWSSMWPFS*WQLGTG Trigger: ACCTGTACCTAACTGCCAGCAAGAAAAAGGCCACAT...ACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CCA 90 bp | TTTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTTGGCCTTTTTCTTGCTaGCAGTTAGGTACAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGLEKVSANVQGLSSGAVWPFSC*QLGTGF Trigger: AAAACCTGTACCTAACTGCCAGCAAGAAAAAGGCCA...AACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS CCA 90 bp | GCGGCCGCGGGGTACCGACAATCACCCGGGGCCACGGAGAGCCTGTaGGAGCCCTCGGCCTTGGAGACGCTACGACCACCGCGGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AAAGYRQSPGATESL*EPSALETLRPPRAK Trigger: CTTGGCCCGCGGTGGTCGTAGCGTCTCCAAGGCCGAGGGCTCCCACAGGCTCTCCGTGGCCCCGGGTGATTGTCGGTACCCCGCGGCCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207728.2 |
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| CDS CCA 90 bp | CCGGGAAGGCGCAGAGGCCTGATCCGCCCCGGCGGCCGGGACCCGTaGAGACCCGACGATTATCCGCGGCCGCGGGGTACCGACAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGRRRGLIRPGGRDP*RPDDYPRPRGTDNH Trigger: GTGATTGTCGGTACCCCGCGGCCGCGGATAATCGTCGGGTCTCCACGGGTCCCGGCCGCCGGGGCGGATCAGGCCTCTGCGCCTTCCCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207728.2 |
||
| CDS GCA 90 bp | TCCTGGCAGGCGCAAGTGACGCGGGGGTGGAAGTCTTTGCGCACGTaGAAAGCGGCCTCTTTCTTCAGGCACTGGGGCAGCTCCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWQAQVTRGWKSLRT*KAASFFRHWGSSAR Trigger: CCTGGCGGAGCTGCCCCAGTGCCTGAAGAAAGAGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000207728.2 |
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| CDS-3UTR CAA 90 bp | GCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTCGGGGGTGGAAGTCTTaGCGCACGTGCAAAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: APHQAPWRAPEEQRVIQSRGWKS*RTCKAA Trigger: GGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCG...AGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS CCA 90 bp | ACGGTGCCTGTCCGGTGCTCCTGGCAGGCGCAAGTGACGCGGGGGTaGAAGTCTTTGCGCACGTGCAAAGCGGCCTCTTTCTTCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVPVRCSWQAQVTRG*KSLRTCKAASFFRH Trigger: GTGCCTGAAGAAAGAGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGGAGCACCGGACAGGCACCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000207728.2 |
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| CDS-3UTR CAA 90 bp | CACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCCGGGGGTGGAAGTCTTaGCGCACGTGCAAAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HPGEPQRNRGSSSLWHGARGWKS*RTCKAA Trigger: GGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCG...GGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CAA 90 bp | TGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCAGGAAGAGGAGCACGTaGGAAGGGTCGTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CPSPGTLESPRGTEGHPVRKRST*EGSFSL Trigger: CAAGGAGAACGACCCTTCCAACGTGCTCCTCTTCCT...GACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS CCA 90 bp | ATGACCTTGGATATCTTAAATCCCACGGTGCCTGTCCGGTGCTCCTaGCAGGCGCAAGTGACGCGGGGGTGGAAGTCTTTGCGCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MTLDILNPTVPVRCS*QAQVTRGWKSLRTC Trigger: GCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGATTTAAGATATCCAAGGTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGAGCCGTGTCCCAAAGTaGGAGACTGAAGGGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: WRAPEEQRVIQSLAWCLGSRVPK*ETEGDT Trigger: GGTGTCCCCTTCAGTCTCCAACTTTGGGACACGGCT...CCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGATCTCTTGGGCCACCTaGAGGGCATCCTTCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: TAPHQAPWRAPEEQRVIQISWAT*RASFSI Trigger: AATGGAGAAGGATGCCCTCAAGGTGGCCCAAGAGAT...CTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS TCA 90 bp | CGCACGTGCAAAGCGGCCTCTTTCTTCAGGCACCAACGGAACTGGTaGTGGGGAACCCGTGATTGTAGCACAGCATCTGGCAAGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RTCKAASFFRHQRNW*WGTRDCSTASGKTR Trigger: CCGGGTCTTGCCAGATGCTGTGCTACAATCACGGGTTCCCCATCACCAGTTCCGTTGGTGCCTGAAGAAAGAGGCCGCTTTGCACGTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150941.8 |
||
| CDS GCA 90 bp | ACAACGATGACCTTGGATATCTTAAATCCCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAAGTGACGCGGGGGTGGAAGTCTTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TTMTLDILNPTVPVR*SWQAQVTRGWKSLR Trigger: GCGCAAAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGATTTAAGATATCCAAGGTCATCGTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGATCTCTTGGGCCACCTaGAGGGCATCCTTCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: WRAPEEQRVIQSLAWCLGISWAT*RASFSI Trigger: AATGGAGAAGGATGCCCTCAAGGTGGCCCAAGAGAT...CCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAATCTCTTGGGCCACCTaGAGGGCATCCTTCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RAPEEQRVIQSLAWCLGAISWAT*RASFSI Trigger: AATGGAGAAGGATGCCCTCAAGGTGGCCCAAGAGAT...TGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGGTAGCCGGGGGTGGAAGTCTTaGCGCACGTGCAAAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EKVSANVQGLSSGAVAGSRGWKS*RTCKAA Trigger: GGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCG...GCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
||
| CDS-3UTR CAA 90 bp | AGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAATGACTAGCCGTGTCCCAAAGTaGGAGACTGAAGGGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: RNRGSSSLWHGAWGQQMTSRVPK*ETEGDT Trigger: GGTGTCCCCTTCAGTCTCCAACTTTGGGACACGGCT...AGTCATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAATAGGAAGAGGAGCACGTaGGAAGGGTCGTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PEEQRVIQSLAWCLGAANRKRST*EGSFSL Trigger: CAAGGAGAACGACCCTTCCAACGTGCTCCTCTTCCT...ATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAACATGTGGCCTTTTTCTaGCTGGCAGTTAGGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQRNRGSSSLWHGAWGQQHVAFF*LAVRYR Trigger: CCTGTACCTAACTGCCAGCAAGAAAAAGGCCACATG...TTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCACATGTGGCCTTTTTCTaGCTGGCAGTTAGGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAPEEQRVIQSLAWCLGAHVAFF*LAVRYR Trigger: CCTGTACCTAACTGCCAGCAAGAAAAAGGCCACATG...TGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGGTAGCACGGTACCCAGGAAGAGGAGCACGTaGGAAGGGTCGTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SANVQGLSSGAVAGSTVPRKRST*EGSFSL Trigger: CAAGGAGAACGACCCTTCCAACGTGCTCCTCTTCCT...GGGTACCGTGCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
||
| CDS-3UTR CAA 90 bp | AGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAAATGACTAGCTCCGCCAGGACATaGGCCTCAAAGGTTAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RNRGSSSLWHGAWGQQMTSSART*ASKVSA Trigger: AGCACTAACCTTTGAGGCCAATGTCCTGGCGGAGCT...AGTCATTTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS TCA 90 bp | ATCTCTTGGGCCACCTTGAGGGCATCCTTCTCCATTAGGGAATACTaGGCAGGAGTAAGGAAGAGGAGCACGTTGGAAGGGTCGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: ISWATLRASFSIREY*AGVRKRSTLEGSFS Trigger: GGAGAACGACCCTTCCAACGTGCTCCTCTTCCTTACTCCTGCTCAGTATTCCCTAATGGAGAAGGATGCCCTCAAGGTGGCCCAAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056241.12 |
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| CDS GCA 90 bp | CTCCTTGAGGGCATCAGTGAGCCACTGCTTGGTGTGTTCCAGGGATaGCACGTCATTCAGGTTGAAGACAATGATGATGGCTTGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLEGISEPLLGVFQG*HVIQVEDNDDGLSS Trigger: GGAGCTCAAGCCATCATCATTGTCTTCAACCTGAATGACGTGGCATCCCTGGAACACACCAAGCAGTGGCTCACTGATGCCCTCAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000156435.2 |
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| CDS GCA 90 bp | TACAGGTTTTTGTCATCGCTGTTGATGCGAACAACATCTGCAATGTaGCGAGCCCCGGATTTCTCCAGCTCCGCCAGGACATTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YRFLSSLLMRTTSAM*RAPDFSSSARTLAS Trigger: TGAGGCCAATGTCCTGGCGGAGCTGGAGAAATCCGGGGCTCGGCACATTGCAGATGTTGTTCGCATCAACAGCGATGACAAAAACCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000156435.2 |
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| CDS-3UTR CAA 90 bp | CTTTGGCATGGTGCCTGGGGGCAGCAAATGACTAGCATGGTCCCTGTCACCTTCCCCACAACGATGACCTaGGATATCTTAAATCCCACG | + |
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Preference number: 5 (lower is better) Translates to: LWHGAWGQQMTSMVPVTFPTTMT*DILNPT Trigger: CGTGGGATTTAAGATATCCAAGGTCATCGTTGTGGG...GAAGGTGACAGGGACCATGCTAGTCATTTGCTGCCCCCAGGCACCATGCCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CAA 90 bp | CTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTTTATCGAAGGTGTCTTaGCAGAACCTATTAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: LPLTRHPGEPQRNRGSSSLSKVS*QNLLMR Trigger: TCTCATTAATAGGTTCTGCAAAGACACCTTCGATAA...ACTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CAA 90 bp | ACTGCCCCTCACCAGGCACCCTGGAGAGCCCCAGAGGAACAGAGGGTCATCCAGTTATCGAAGGTGTCTTaGCAGAACCTATTAATGAGA | + |
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Preference number: 5 (lower is better) Translates to: TAPHQAPWRAPEEQRVIQLSKVS*QNLLMR Trigger: TCTCATTAATAGGTTCTGCAAAGACACCTTCGATAA...CTGGATGACCCTCTGTTCCTCTGGGGCTCTCCAGGGTGCCTGGTGAGGGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CAA 90 bp | GGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAAGGAAGAGGAGCACGTaGGAAGGGTCGTTCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: GLEKVSANVQGLSSGAVARKRST*EGSFSL Trigger: CAAGGAGAACGACCCTTCCAACGTGCTCCTCTTCCT...TGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CAA 90 bp | TGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGCTCCGCCAGGACATaGGCCTCAAAGGTTAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WSGKSQCKCPGVEFWSSCSSART*ASKVSA Trigger: AGCACTAACCTTTGAGGCCAATGTCCTGGCGGAGCT...GCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CAA 90 bp | GGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAAGCTCCGCCAGGACATaGGCCTCAAAGGTTAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLEKVSANVQGLSSGAVASSART*ASKVSA Trigger: TGCACTAACCTTTGAGGCCAATGTCCTGGCGGAGCT...TGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156435.2 |
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| CDS-3UTR CAA 90 bp | CCCCAGAGGAACAGAGGGTCATCCAGTCTTTGGCATGGTGCCTGGGGGCAGCAATTATCGAAGGTGTCTTaGCAGAACCTATTAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PQRNRGSSSLWHGAWGQQLSKVS*QNLLMR Trigger: TCTCATTAATAGGTTCTGCAAAGACACCTTCGATAA...TTGCTGCCCCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CAA 90 bp | TTTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTAGCCGTGTCCCAAAGTaGGAGACTGAAGGGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: FGLEKVSANVQGLSSGAVSRVPK*ETEGDT Trigger: GGTGTCCCCTTCAGTCTCCAACTTTGGGACACGGCT...AACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CAA 90 bp | TTTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTAGCTCCGCCAGGACATaGGCCTCAAAGGTTAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FGLEKVSANVQGLSSGAVSSART*ASKVSA Trigger: AGCACTAACCTTTGAGGCCAATGTCCTGGCGGAGCT...AACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CAA 90 bp | GGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCACATGTGGCCTTTTTCTaGCTGGCAGTTAGGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLEKVSANVQGLSSGAVAHVAFF*LAVRYR Trigger: CCTGTACCTAACTGCCAGCAAGAAAAAGGCCACATG...TGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CAA 90 bp | GAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTGCAGGTAGCCATGTGGCCTTTTTCTaGCTGGCAGTTAGGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: EKVSANVQGLSSGAVAGSHVAFF*LAVRYR Trigger: CCTGTACCTAACTGCCAGCAAGAAAAAGGCCACATG...GCTACCTGCAACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS-3UTR CAA 90 bp | TTTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTCCCACAACGATGACCTaGGATATCTTAAATCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: FGLEKVSANVQGLSSGAVPTTMT*DILNPT Trigger: CGTGGGATTTAAGATATCCAAGGTCATCGTTGTGGG...AACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 |
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| CDS-3UTR CAA 90 bp | CTTTGGTCTGGAAAAAGTCAGTGCAAATGTCCAGGGGTTGAGTTCTGGAGCAGTTTATCGAAGGTGTCTTaGCAGAACCTATTAATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LWSGKSQCKCPGVEFWSSLSKVS*QNLLMR Trigger: TCTCATTAATAGGTTCTGCAAAGACACCTTCGATAA...ACTGCTCCAGAACTCAACCCCTGGACATTTGCACTGACTTTTTCCAGACCAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000156435.2 |
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| CDS CCA 72 bp | CGCAGAGGCCTGATCCGCCCCGGCGGCCGGGACCCGTaGAGACCCGACGATTATCCGCGGCCGCGGGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: RRGLIRPGGRDP*RPDDYPRPRGT Trigger: GGTACCCCGCGGCCGCGGATAATCGTCGGGTCTCCACGGGTCCCGGCCGCCGGGGCGGATCAGGCCTCTGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207728.2 |
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| CDS GCA 72 bp | GTCCCTCCGCACGGGCGCCAGAATGTTCATCTTGTCTaGGGCCTTGCGGGGCTCCCCGGGAAGGCGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VPPHGRQNVHLV*GLAGLPGKAQR Trigger: CCTCTGCGCCTTCCCGGGGAGCCCCGCAAGGCCGCAGACAAGATGAACATTCTGGCGCCCGTGCGGAGGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207728.2 |
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| CDS CCA 72 bp | GGGTACCGACAATCACCCGGGGCCACGGAGAGCCTGTaGGAGCCCTCGGCCTTGGAGACGCTACGACCACCG | + |
|
Preference number: 6 (lower is better) Translates to: GYRQSPGATESL*EPSALETLRPP Trigger: CGGTGGTCGTAGCGTCTCCAAGGCCGAGGGCTCCCACAGGCTCTCCGTGGCCCCGGGTGATTGTCGGTACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207728.2 |
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| CDS TCA 72 bp | CCACGGTGCCTGTCCGGTGCTCCTGGCAGGCGCAAGTaGCGCGGGGGTGGAAGTCTTTGCGCACGTGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PRCLSGAPGRRK*RGGGSLCARAK Trigger: CTTTGCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000207728.2 |
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| CDS CAA 90 bp | GTCCGGTGCTCCTGGCAGGCGCAAGTGACGCGGGGGTGGAAGTCTTaGCGCACGTGCAAAGCGGCCTCTTTCTTCAGGCACTGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VRCSWQAQVTRGWKS*RTCKAASFFRHWGS Trigger: GCTGCCCCAGTGCCTGAAGAAAGAGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGGAGCACCGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000207728.2 |
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| CDS CCA 72 bp | GTCCGGTGCTCCTGGCAGGCGCAAGTGACGCGGGGGTaGAAGTCTTTGCGCACGTGCAAAGCGGCCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRCSWQAQVTRG*KSLRTCKAASF Trigger: GAAAGAGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGGAGCACCGGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000207728.2 |
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| CDS GCA 72 bp | GCGCAAGTGACGCGGGGGTGGAAGTCTTTGCGCACGTaGAAAGCGGCCTCTTTCTTCAGGCACTGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AQVTRGWKSLRT*KAASFFRHWGS Trigger: GCTGCCCCAGTGCCTGAAGAAAGAGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000207728.2 |
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| CDS CAA 90 bp | GTCCGGTGCTCCTGGCAGGCGCAAGTGACGCGGGGGTGGAAGTCTTaGCGCACGTGCAAAGCGGCCTCTTTCTTCAGGCACCAACGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VRCSWQAQVTRGWKS*RTCKAASFFRHQRN Trigger: GTTCCGTTGGTGCCTGAAGAAAGAGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGGAGCACCGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150941.8 |
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| CDS CAA 72 bp | TCCTGGCAGGCGCAAGTGACGCGGGGGTGGAAGTCTTaGCGCACGTGCAAAGCGGCCTCTTTCTTCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SWQAQVTRGWKS*RTCKAASFFRH Trigger: GTGCCTGAAGAAAGAGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000207728.2 |
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| CDS GCA 72 bp | ACCTTGGATATCTTAAATCCCACGGTGCCTGTCCGGTaGTCCTGGCAGGCGCAAGTGACGCGGGGGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TLDILNPTVPVR*SWQAQVTRGWK Trigger: CTTCCACCCCCGCGTCACTTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGATTTAAGATATCCAAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 |
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| CDS GCA 72 bp | GCGCAAGTGACGCGGGGGTGGAAGTCTTTGCGCACGTaGAAAGCGGCCTCTTTCTTCAGGCACCAACGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AQVTRGWKSLRT*KAASFFRHQRN Trigger: GTTCCGTTGGTGCCTGAAGAAAGAGGCCGCTTTGCACGTGCGCAAAGACTTCCACCCCCGCGTCACTTGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150941.8 |
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| CDS CAA 90 bp | TCTGCAATGTGCCGAGCCCCGGATTTCTCCAGCTCCGCCAGGACATaGGCCTCAAAGGTTAGTGCAGTGAGGGAGGACACCGCCCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SAMCRAPDFSSSART*ASKVSAVREDTAQY Trigger: GTACTGGGCGGTGTCCTCCCTCACTGCACTAACCTTTGAGGCCAATGTCCTGGCGGAGCTGGAGAAATCCGGGGCTCGGCACATTGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156435.2 |
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| CDS CCA 72 bp | GATATCTTAAATCCCACGGTGCCTGTCCGGTGCTCCTaGCAGGCGCAAGTGACGCGGGGGTGGAAGTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: DILNPTVPVRCS*QAQVTRGWKSL Trigger: CAAAGACTTCCACCCCCGCGTCACTTGCGCCTGCCAGGAGCACCGGACAGGCACCGTGGGATTTAAGATATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 |
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| CDS CAA 90 bp | TCTGCAATGTGCCGAGCCCCGGATTTCTCCAGCTCCGCCAGGACATaGGCCTCAAAGGTTAGTGCTGCCACACGGAAGAAGAATTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SAMCRAPDFSSSART*ASKVSAATRKKNSR Trigger: CCGGGAATTCTTCTTCCGTGTGGCAGCACTAACCTTTGAGGCCAATGTCCTGGCGGAGCTGGAGAAATCCGGGGCTCGGCACATTGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 |
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| CDS CAA 90 bp | TTGGAACCCACAAGGAAGAGGAGCACGTTGGAAGGGTCGTTCTCCTaGAGGGCATCAGTGAGCCACTGCTTGGTGTGTTCCAGGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LEPTRKRSTLEGSFS*RASVSHCLVCSRDA Trigger: GGCATCCCTGGAACACACCAAGCAGTGGCTCACTGATGCCCTCAAGGAGAACGACCCTTCCAACGTGCTCCTCTTCCTTGTGGGTTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000156435.2 |
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| CDS GCA 72 bp | TTGTCATCGCTGTTGATGCGAACAACATCTGCAATGTaGCGAGCCCCGGATTTCTCCAGCTCCGCCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: LSSLLMRTTSAM*RAPDFSSSART Trigger: TGTCCTGGCGGAGCTGGAGAAATCCGGGGCTCGGCACATTGCAGATGTTGTTCGCATCAACAGCGATGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000156435.2 |
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| CDS CAA 72 bp | ACAAGGAAGAGGAGCACGTTGGAAGGGTCGTTCTCCTaGAGGGCATCAGTGAGCCACTGCTTGGTGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TRKRSTLEGSFS*RASVSHCLVCS Trigger: GGAACACACCAAGCAGTGGCTCACTGATGCCCTCAAGGAGAACGACCCTTCCAACGTGCTCCTCTTCCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000156435.2 |
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| CDS TCA 72 bp | GCCACCTTGAGGGCATCCTTCTCCATTAGGGAATACTaGGCAGGAGTAAGGAAGAGGAGCACGTTGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ATLRASFSIREY*AGVRKRSTLEG Trigger: CCCTTCCAACGTGCTCCTCTTCCTTACTCCTGCTCAGTATTCCCTAATGGAGAAGGATGCCCTCAAGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056241.12 |
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| CDS GCA 72 bp | CAGGTTTTTGTCATCGCTGTTGATGCGAACAACATCTaGAATGTGCCGAGCCCCGGATTTCTCCAGCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QVFVIAVDANNI*NVPSPGFLQLR Trigger: GCGGAGCTGGAGAAATCCGGGGCTCGGCACATTGCAGATGTTGTTCGCATCAACAGCGATGACAAAAACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000156435.2 |
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| CDS CAA 72 bp | GTCTTCCCCACAGATAGGTCTCCCACAACGATGACCTaGGATATCTTAAATCCCACGGTGCCTGTCCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VFPTDRSPTTMT*DILNPTVPVRC Trigger: GCACCGGACAGGCACCGTGGGATTTAAGATATCCAAGGTCATCGTTGTGGGAGACCTATCTGTGGGGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 |
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| CDS TCA 72 bp | GCCACCTTGAGGGCATCCTTCTCCATTAGGGAATACTaGGCAGGAGTACTCAGGTCCTTCTTGGAACCCACA | + |
|
Preference number: 6 (lower is better) Translates to: ATLRASFSIREY*AGVLRSFLEPT Trigger: TGTGGGTTCCAAGAAGGACCTGAGTACTCCTGCTCAGTATTCCCTAATGGAGAAGGATGCCCTCAAGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002128.14 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000156435.2 |
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| CDS CAA 90 bp | GGACAACATGTGGCCTTTTTCTTGCTGGCAGTTAGGTACAGGTTTTaGTCATCGCTGTTGATGCGAACAACATCTGCAATGTGCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GQHVAFFLLAVRYRF*SSLLMRTTSAMCRA Trigger: GGCTCGGCACATTGCAGATGTTGTTCGCATCAACAGCGATGACAAAAACCTGTACCTAACTGCCAGCAAGAAAAAGGCCACATGTTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000156435.2 |
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| CDS CAA 72 bp | TGCCACGTCATTCAGGTTGAAGACAATGATGATGGCTaGAGCTCCACGGTAGTAGGTGGAAGCAATGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: CHVIQVEDNDDG*SSTVVGGSNAL Trigger: AAGTGCATTGCTTCCACCTACTACCGTGGAGCTCAAGCCATCATCATTGTCTTCAACCTGAATGACGTGGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002128.14 ENSMUST00000056241.12 ENSMUST00000108322.9 ENSMUST00000150941.8 ENSMUST00000156435.2 |
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