Pregenerated sensors for RAB31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056515Ensembl transcript IDs: ENSMUST00000070673.9, ENSMUST00000233258.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGGTGAAAGCCGTGATCACATGAGCACAGCCAGAATCCCTGGCTaGCCACCACTGCCTCCTTACGCCTCGCCCGGAATGCTACGGAGC | + |
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Preference number: 1 (lower is better) Translates to: NGESRDHMSTARIPG*PPLPPYASPGMLRS Trigger: GCTCCGTAGCATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGCCAGGGATTCTGGCTGTGCTCATGTGATCACGGCTTTCACCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR GCA 90 bp | GAATCCCTGGCTGACCACCACTGCCTCCTTACGCCTCGCCCGGAATaGTACGGAGCAGCAAGAAGCCTACACAAGCCAGAGTCCATTATG | + |
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Preference number: 1 (lower is better) Translates to: ESLADHHCLLTPRPE*YGAARSLHKPESIM Trigger: CATAATGGACTCTGGCTTGTGTAGGCTTCTTGCTGCTCCGTAGCATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGCCAGGGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR CCA 90 bp | CGAAGGTCCTCGGTGTCTGCAGAAGGATCTTCTAGGTACCAAACCTaGGTCCAGCCCAAGTGGAAACCCTTTACAAAAACACCGGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: RRSSVSAEGSSRYQT*VQPKWKPFTKTPER Trigger: CCTCTCCGGTGTTTTTGTAAAGGGTTTCCACTTGGGCTGGACCCAGGTTTGGTACCTAGAAGATCCTTCTGCAGACACCGAGGACCTTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR GCA 90 bp | GTCCTTTGGGGACGTCTCCTGAGAAAGAATCCCTTTGACATTCTGTaGCTCACTTATGGGCACAAGGTCACGAGCCAAACACAGCCACTC | + |
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Preference number: 1 (lower is better) Translates to: VLWGRLLRKNPFDIL*LTYGHKVTSQTQPL Trigger: GAGTGGCTGTGTTTGGCTCGTGACCTTGTGCCCATAAGTGAGGCACAGAATGTCAAAGGGATTCTTTCTCAGGAGACGTCCCCAAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR CCA 90 bp | CCTCAGGAAAGAACGGGATTCCTACTGGGGCACAGCCCTTGCTGTTaGCTAGGATGCAGGTTAGTCTGCAAGATGACGTCATATCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: PQERTGFLLGHSPCC*LGCRLVCKMTSYPV Trigger: TACTGGATATGACGTCATCTTGCAGACTAACCTGCATCCTAGCCAACAGCAAGGGCTGTGCCCCAGTAGGAATCCCGTTCTTTCCTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR CCA 90 bp | TCTGCAGAAGGATCTTCTAGGTACCAAACCTGGGTCCAGCCCAAGTaGAAACCCTTTACAAAAACACCGGAGAGGGCGACAGTCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SAEGSSRYQTWVQPK*KPFTKTPERATVCV Trigger: CACACAGACTGTCGCCCTCTCCGGTGTTTTTGTAAAGGGTTTCCACTTGGGCTGGACCCAGGTTTGGTACCTAGAAGATCCTTCTGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR TCA 90 bp | GAGTGGACGAATGTCTTTGCCAGCATGGGGAATCCTGTCAGCTGCTaGTATTGGAGACATGGGATAGGCACTGATGGTCTTGAGAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: EWTNVFASMGNPVSC*YWRHGIGTDGLEKS Trigger: AGACTTCTCAAGACCATCAGTGCCTATCCCATGTCTCCAATATCAGCAGCTGACAGGATTCCCCATGCTGGCAAAGACATTCGTCCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR TCA 90 bp | TCACAATGCTTCTCTGATCCAACCCAGGGCAGCTCACTCTCAAGGTaGAGCCCAGACAGTTCATGCAAAACTCAACCACTGCAAACCCAA | + |
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Preference number: 1 (lower is better) Translates to: SQCFSDPTQGSSLSR*SPDSSCKTQPLQTQ Trigger: TTGGGTTTGCAGTGGTTGAGTTTTGCATGAACTGTCTGGGCTTCACCTTGAGAGTGAGCTGCCCTGGGTTGGATCAGAGAAGCATTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR GCA 90 bp | AGGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATaGGAAGGTCCTCGGTGTCTGCAGAAGGATCTTCTAGGTACCAAA | + |
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Preference number: 1 (lower is better) Translates to: RSANPKLVIREQSTR*EGPRCLQKDLLGTK Trigger: TTTGGTACCTAGAAGATCCTTCTGCAGACACCGAGGACCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR CCA 90 bp | AGACAGTTCATGCAAAACTCAACCACTGCAAACCCAATCCAAAGCTaGGGCATCCTCTCCTGGGAACAGTACCAATTTGGCTTGGAAATC | + |
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Preference number: 1 (lower is better) Translates to: RQFMQNSTTANPIQS*GILSWEQYQFGLEI Trigger: GATTTCCAAGCCAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTTGCAGTGGTTGAGTTTTGCATGAACTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR CCA 90 bp | CGCTCACCTGTGAGAGATAAGAAAATGGGGGTTGGGAACAGAATTTaGGGAGTAGCCATAAGGACACTACATCCTATGTCTGGAGCAATT | + |
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Preference number: 1 (lower is better) Translates to: RSPVRDKKMGVGNRI*GVAIRTLHPMSGAI Trigger: AATTGCTCCAGACATAGGATGTAGTGTCCTTATGGCTACTCCCCAAATTCTGTTCCCAACCCCCATTTTCTTATCTCTCACAGGTGAGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCCAGAATCCCTGGCTGACCACCACTGCCTCCTTACGCCTCGCCCGGAATGCCCCCCTGCATGGCTGTaGCATCAACAGCATGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: QPESLADHHCLLTPRPECPPAWL*HQQHAA Trigger: GGCTGCATGCTGTTGATGTCACAGCCATGCAGGGGG...GCATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGCCAGGGATTCTGGCTG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | AATCCCTGGCTGACCACCACTGCCTCCTTACGCCTCGCCCGGAATGCTACGGAGAGCTCACTCTCAAGGTaGAGCCCAGACAGTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: NPWLTTTASLRLARNATESSLSR*SPDSSC Trigger: GCATGAACTGTCTGGGCTTCACCTTGAGAGTGAGCT...CTCCGTAGCATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGCCAGGGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | AATCCCTGGCTGACCACCACTGCCTCCTTACGCCTCGCCCGGAATGCTACGGAGTGCACACTTACCCCCTaGATGGCTGTGACATCAACA | + |
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Preference number: 2 (lower is better) Translates to: NPWLTTTASLRLARNATECTLTP*MAVTST Trigger: TGTTGATGTCACAGCCATGCAGGGGGTAAGTGTGCA...CTCCGTAGCATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGCCAGGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | AATCCCTGGCTGACCACCACTGCCTCCTTACGCCTCGCCCGGAATGCTACGGAGCGTTCTCTGTTTGTTTaGCCTGTAGTGAGTGGACGA | + |
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Preference number: 2 (lower is better) Translates to: NPWLTTTASLRLARNATERSLFV*PVVSGR Trigger: TCGTCCACTCACTACAGGTCAAACAAACAGAGAACG...CTCCGTAGCATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGCCAGGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATGCGAAGGTCCTGGGGCACAGCCCTTaGTGTTGGCTAGGATGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GAPTRNSLSENRVQDAKVLGHSP*CWLGCR Trigger: CCTGCATCCTAGCCAACAGCAAGGGCTGTGCCCCAG...GACCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCCAGAATCCCTGGCTGACCACCACTGCCTCCTTACGCCTCGCCCGGAATGCTGGTTGGGTTACAGATaGCCATACCTTAGAAAAATG | + |
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Preference number: 2 (lower is better) Translates to: QPESLADHHCLLTPRPECWLGYR*PYLRKM Trigger: CATTTTTCTAAGGTATGGTCATCTGTAACCCAACCA...GCATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGCCAGGGATTCTGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR CCA 90 bp | GCTCAAAGTGGTGTGAGTAGTTGTGTGCCCAAGCCACGTCTCTCTCTGCTCAGGTGGGGCATCCTCTCCTaGGAACAGTACCAATTTGGC | + |
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Preference number: 2 (lower is better) Translates to: AQSGVSSCVPKPRLSLLRWGILS*EQYQFG Trigger: GCCAAATTGGTACTGTTCCCAGGAGAGGATGCCCCA...CCTGAGCAGAGAGAGACGTGGCTTGGGCACACAACTACTCACACCACTTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATGCGAAGGTCGTCTGTGTGACGGTATaGCTGCTGAGTCACTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GAPTRNSLSENRVQDAKVVCVTV*LLSHWV Trigger: CACCCAGTGACTCAGCAGTCATACCGTCACACAGAC...GACCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | GCTCAAAGTGGTGTGAGTAGTTGTGTGCCCAAGCCACGTCTCTCTCTGCTCAGGGTGACATCAACAGCATaGAGCCTGGGGAAAAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: AQSGVSSCVPKPRLSLLRVTSTA*SLGKSK Trigger: CTTGCTTTTCCCCAGGCTGCATGCTGTTGATGTCAC...CCTGAGCAGAGAGAGACGTGGCTTGGGCACACAACTACTCACACCACTTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | CTCAAGGTGAAGCCCAGACAGTTCATGCAAAACTCAACCACTGCAAACCCAATCCCCTGTTCAGCATCCTaGAGCAGGTGTCCCAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: LKVKPRQFMQNSTTANPIPCSAS*SRCPRV Trigger: TACCCTGGGACACCTGCTGCAGGATGCTGAACAGGG...GATTGGGTTTGCAGTGGTTGAGTTTTGCATGAACTGTCTGGGCTTCACCTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR CAA 90 bp | AACCTAACCTCAGGAAAGAACGGGATTCCTACTGGGGCACAGCCCTaGCTGTTGGCTAGGATGCAGGTTAGTCTGCAAGATGACGTCATA | + |
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Preference number: 2 (lower is better) Translates to: NLTSGKNGIPTGAQP*LLARMQVSLQDDVI Trigger: TATGACGTCATCTTGCAGACTAACCTGCATCCTAGCCAACAGCAAGGGCTGTGCCCCAGTAGGAATCCCGTTCTTTCCTGAGGTTAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | GCTCAAAGTGGTGTGAGTAGTTGTGTGCCCAAGCCACGTCTCTCTCTGCTCAGGATGTTGCGGTGGTGGTaGGTTTTCCAGAGTTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: AQSGVSSCVPKPRLSLLRMLRWW*VFQSFL Trigger: TAGAAAACTCTGGAAAACTCACCACCACCGCAACAT...CCTGAGCAGAGAGAGACGTGGCTTGGGCACACAACTACTCACACCACTTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | TTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATCCCTTTGGCACAGCATACAGATaGCATTTGCTGACAGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LHSPATVLWGRLLRKNPFGTAYR*HLLTVR Trigger: TCTCACTGTCAGCAAATGGCATCTGTATGCTGTGCC...AAAGGGATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCAAACCCAATCCAAAGCTGGGGCATCCTCTCCTGGGAACAGTACCAATTTGGTGGACGAATGTCTTTaGCAGCATGGGGAATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LQTQSKAGASSPGNSTNLVDECL*QHGESC Trigger: ACAGGATTCCCCATGCTGGCAAAGACATTCGTCCAC...CAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR CAA 90 bp | CATGTTGCGGTGGTGGTGAGTTTTCCAGAGTTTTCTATCATTTCTTaGCAGGAAACGTCCCTGTTCAGCATCCTGCAGCAGGTGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: HVAVVVSFPEFSIIS*QETSLFSILQQVSQ Trigger: CTGGGACACCTGCTGCAGGATGCTGAACAGGGACGTTTCCTGCAAAGAAATGATAGAAAACTCTGGAAAACTCACCACCACCGCAACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | CTCAAGGTGAAGCCCAGACAGTTCATGCAAAACTCAACCACTGCAAACCCAATCGCCTTTGCCTTTTGGTaGACTGGCCAGAAAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LKVKPRQFMQNSTTANPIAFAFW*TGQKGR Trigger: CCTTCCTTTCTGGCCAGTTCACCAAAAGGCAAAGGC...GATTGGGTTTGCAGTGGTTGAGTTTTGCATGAACTGTCTGGGCTTCACCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTCTTTGCCAGCATGGGGAATCCTGTCAGCTGCTGATATTGGAGACATGGGATGGGCACTGACTGTTTaGCACCCTTTCTCTCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: MSLPAWGILSAADIGDMGWALTV*HPFSPK Trigger: CTTTGGAGAGAAAGGGTGTCAAACAGTCAGTGCCCA...TCCCATGTCTCCAATATCAGCAGCTGACAGGATTCCCCATGCTGGCAAAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | TTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATCCCTTTGTGGTAACATGTCTCTaGCTGGTTTGCTACAACCTA | + |
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Preference number: 2 (lower is better) Translates to: LHSPATVLWGRLLRKNPFVVTCL*LVCYNL Trigger: TAGGTTGTAGCAAACCAGGCAGAGACATGTTACCAC...AAAGGGATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATGCGAAGGGTCGTACCCTCACAATaGTTCTCTGATCCAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: KERQPETRYQRTEYKMRRVVPSQ*FSDPTQ Trigger: CTGGGTTGGATCAGAGAAGCATTGTGAGGGTACGAC...CCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR CCA 90 bp | AAACATTTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATTCCTTGTGTGTGCACTaGACACCAACAAAGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: KHLHSPATVLWGRLLRKNSLCVH*TPTKRA Trigger: AGCCCTCTTTGTTGGTGTCCAGTGCACACACAAGGA...ATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAAATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | AAACATTTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATCAAAGAACAGCACTCTaGGGTGTGTGGACCAATCTA | + |
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Preference number: 2 (lower is better) Translates to: KHLHSPATVLWGRLLRKNQRTAL*GVWTNL Trigger: TAGATTGGTCCACACACCTCAGAGTGCTGTTCTTTG...ATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAAATGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCAAACCCAATCCAAAGCTGGGGCATCCTCTCCTGGGAACAGTACCAATTTGCCAGATGTGACATCATaGCATTGTCTCCTAATGCTC | + |
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Preference number: 2 (lower is better) Translates to: LQTQSKAGASSPGNSTNLPDVTS*HCLLML Trigger: GAGCATTAGGAGACAATGTCATGATGTCACATCTGG...CAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | TTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATCCCTTTTCCTATTATAGCCTTTaGCTTTTGGTGAACTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LHSPATVLWGRLLRKNPFSYYSL*LLVNWP Trigger: TGGCCAGTTCACCAAAAGGCAAAGGCTATAATAGGA...AAAGGGATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | AAACCCAATCCAAAGCTGGGGCATCCTCTCCTGGGAACAGTACCAATTTGGCTTTCTCCTAATGCTCTGTaGAGTGATCACCCCAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: KPNPKLGHPLLGTVPIWLSPNAL*SDHPKS Trigger: ACTTTTGGGGTGATCACTTCACAGAGCATTAGGAGA...AAGCCAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATGCGAAGGAGCCCAGACAGTTCATaGAAAACTCAACCACTGCAA | + |
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Preference number: 2 (lower is better) Translates to: KERQPETRYQRTEYKMRRSPDSS*KTQPLQ Trigger: TTGCAGTGGTTGAGTTTTGCATGAACTGTCTGGGCT...CCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR CCA 90 bp | AAACCCAATCCAAAGCTGGGGCATCCTCTCCTGGGAACAGTACCAATTTGGCTTTTTCAGTTTAAGCAGTaGTCCAGCTGTGCATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KPNPKLGHPLLGTVPIWLFQFKQ*SSCASL Trigger: CAGAGATGCACAGCTGGACCACTGCTTAAACTGAAA...AAGCCAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | CTCACTCTCAAGGTGAAGCCCAGACAGTTCATGCAAAACTCAACCACTGCAAACAAACATCCCCAGATGTaGCATCATGACATTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LTLKVKPRQFMQNSTTANKHPQM*HHDIVS Trigger: GGAGACAATGTCATGATGTCACATCTGGGGATGTTT...GTTTGCAGTGGTTGAGTTTTGCATGAACTGTCTGGGCTTCACCTTGAGAGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATGCGAAGGTCAGCAAGTACAAGCCTTaGTGTGTGCATTTCATAAAC | + |
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Preference number: 2 (lower is better) Translates to: GAPTRNSLSENRVQDAKVSKYKP*CVHFIN Trigger: GTTTATGAAATGCACACAGCAAGGCTTGTACTTGCT...GACCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGCTGCTATTAACAGAAGTCTTCCCTACAATTTAGGCTCAAACATCCCCAGAGCAGTGGTCCAGCTGTaGATCTCTGATCTCCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LAAINRSLPYNLGSNIPRAVVQL*ISDLPQ Trigger: CTGAGGGAGATCAGAGATGCACAGCTGGACCACTGC...TCTGGGGATGTTTGAGCCTAAATTGTAGGGAAGACTTCTGTTAATAGCAGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATCCCTTTCTTTCTCTCCAAAGTTaGCAAAGTTTAAGGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: LHSPATVLWGRLLRKNPFLSLQS*QSLRMS Trigger: AGACATCCTTAAACTTTGCCAACTTTGGAGAGAAAG...AAAGGGATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATGCGAAGGTCTTTGTCGAGGGTCAGTaGTTAAAAACATCCCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: GAPTRNSLSENRVQDAKVFVEGQ*LKTSQK Trigger: CTTTTGGGATGTTTTTAACCACTGACCCTCGACAAA...GACCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | AAACATTTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATATCAGGACAAGTATTTaGTATCCCCTGTATTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: KHLHSPATVLWGRLLRKNIRTSI*YPLYSR Trigger: CCTAGAATACAGGGGATAGCAAATACTTGTCCTGAT...ATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAAATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR TCA 90 bp | CTCACTCTCAAGGTGAAGCCCAGACAGTTCATGCAAAACTCAACCACTGCAAACTTTAAGGATGTCTTCTaGTTTCACACCTTTAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LTLKVKPRQFMQNSTTANFKDVF*FHTFRG Trigger: ACCCCTAAAGGTGTGAAATCAGAAGACATCCTTAAA...GTTTGCAGTGGTTGAGTTTTGCATGAACTGTCTGGGCTTCACCTTGAGAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATGCGAAGGTTTCTATCATTTCTTTaGAGGAAACGTCCCTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: KERQPETRYQRTEYKMRRFLSFL*RKRPCS Trigger: TGAACAGGGACGTTTCCTGCAAAGAAATGATAGAAA...CCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR-3UTR GCA 90 bp | GAATGCAAGTTAACTATCTCAGGAAAAGCATTGGGTATTCTTAAGCCCATAAGAGCTCCCATAAGGCATTaGAGCTCCCATAAGGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: ECKLTISGKALGILKPIRAPIRH*SSHKAL Trigger: CAATGCCTTATGGGAGCTGCAATGCCTTATGGGAGC...TCTTATGGGCTTAAGAATACCCAATGCTTTTCCTGAGATAGTTAACTTGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCTGCTATTAACAGAAGTCTTCCCTACAATTTAGGCTCAAACATCCCCAGATGTCCATCAGATAAATaGAAGGAGATAGGGATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LAAINRSLPYNLGSNIPRCPSDK*KEIGMV Trigger: CACCATCCCTATCTCCTTTCATTTATCTGATGGACA...TCTGGGGATGTTTGAGCCTAAATTGTAGGGAAGACTTCTGTTAATAGCAGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR-3UTR GCA 90 bp | AAACTTGAATGCAAGTTAACTATCTCAGGAAAAGCATTGGGTATTCTTAAGCCCGCTCCCATAAGGCATTaGAGCCATCAGAAAGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: KLECKLTISGKALGILKPAPIRH*SHQKVC Trigger: ACACACTTTCTGATGGCTGCAATGCCTTATGGGAGC...GGGCTTAAGAATACCCAATGCTTTTCCTGAGATAGTTAACTTGCATTCAAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATGCAAGTTAACTATCTCAGGAAAAGCATTGGGTATTCTTAAGCCCATAAGATCTCCCATAAGGCATTaGAGCTCCCATAAGGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: ECKLTISGKALGILKPIRSPIRH*SSHKAL Trigger: CAATGCCTTATGGGAGCTGCAATGCCTTATGGGAGA...TCTTATGGGCTTAAGAATACCCAATGCTTTTCCTGAGATAGTTAACTTGCATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
||
| 3UTR TCA 72 bp | AGCCGTGATCACATGAGCACAGCCAGAATCCCTGGCTaGCCACCACTGCCTCCTTACGCCTCGCCCGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: SRDHMSTARIPG*PPLPPYASPGM Trigger: CATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGCCAGGGATTCTGGCTGTGCTCATGTGATCACGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR GCA 72 bp | TGCTCAGGCTGGTGGCACGTGTGCACACTTACCCCCTaGATGGCTGTGACATCAACAGCATGCAGCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: CSGWWHVCTLTP*MAVTSTACSLG Trigger: CCCCAGGCTGCATGCTGTTGATGTCACAGCCATGCAGGGGGTAAGTGTGCACACGTGCCACCAGCCTGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR GCA 72 bp | GCTGACCACCACTGCCTCCTTACGCCTCGCCCGGAATaGTACGGAGCAGCAAGAAGCCTACACAAGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ADHHCLLTPRPE*YGAARSLHKPE Trigger: CTCTGGCTTGTGTAGGCTTCTTGCTGCTCCGTAGCATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR CCA 72 bp | GTTGTGTGCCCAAGCCACGTCTCTCTCTGCTCAGGCTaGTGGCACGTGTGCACACTTACCCCCTGCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VVCPSHVSLCSG*WHVCTLTPCMA Trigger: AGCCATGCAGGGGGTAAGTGTGCACACGTGCCACCAGCCTGAGCAGAGAGAGACGTGGCTTGGGCACACAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATGCGAAGGCCACGGGTGGGGTCCTaGTGTGTGCACTGGACACCA | + |
|
Preference number: 3 (lower is better) Translates to: KERQPETRYQRTEYKMRRPRVGS*CVHWTP Trigger: TGGTGTCCAGTGCACACACAAGGACCCCACCCGTGG...CCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATGCGAAGGTCCCCTGCCACTGTCCTTaGGGGACGTCTCCTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GAPTRNSLSENRVQDAKVPCHCP*GTSPEK Trigger: TTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGG...GACCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR TCA 72 bp | GGAAAAGCAAGGGGTCGTACCCTCACAATGCTTCTCTaGTCCAACCCAGGGCAGCTCACTCTCAAGGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GKARGRTLTMLL*SNPGQLTLKVK Trigger: CTTCACCTTGAGAGTGAGCTGCCCTGGGTTGGATCAGAGAAGCATTGTGAGGGTACGACCCCTTGCTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR GCA 72 bp | CAGGAAAGAACGGGATTCCTACTGGGGCACAGCCCTTaGTGTTGGCTAGGATGCAGGTTAGTCTGCAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: QERTGFLLGHSP*CWLGCRLVCKM Trigger: CATCTTGCAGACTAACCTGCATCCTAGCCAACAGCAAGGGCTGTGCCCCAGTAGGAATCCCGTTCTTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR CCA 72 bp | AGAACGGGATTCCTACTGGGGCACAGCCCTTGCTGTTaGCTAGGATGCAGGTTAGTCTGCAAGATGACGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RTGFLLGHSPCC*LGCRLVCKMTS Trigger: TGACGTCATCTTGCAGACTAACCTGCATCCTAGCCAACAGCAAGGGCTGTGCCCCAGTAGGAATCCCGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR TCA 72 bp | TGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTaGGAAAGAATCCCTTTGACATTCTGTGCCTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: CTALPLSFGDVS*ERIPLTFCASL Trigger: AAGTGAGGCACAGAATGTCAAAGGGATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR CCA 72 bp | GGATCTTCTAGGTACCAAACCTGGGTCCAGCCCAAGTaGAAACCCTTTACAAAAACACCGGAGAGGGCGACA | + |
|
Preference number: 3 (lower is better) Translates to: GSSRYQTWVQPK*KPFTKTPERAT Trigger: TGTCGCCCTCTCCGGTGTTTTTGTAAAGGGTTTCCACTTGGGCTGGACCCAGGTTTGGTACCTAGAAGATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTCAAAGTGGTGTGAGTAGTTGTGTGCCCAAGCCACGTCTCTCTCTGCTCAGGTCGTTCTCTGTTTGTTaGACCTGTAGTGAGTGGACG | + |
|
Preference number: 3 (lower is better) Translates to: AQSGVSSCVPKPRLSLLRSFSVC*TCSEWT Trigger: CGTCCACTCACTACAGGTCAAACAAACAGAGAACGA...CCTGAGCAGAGAGAGACGTGGCTTGGGCACACAACTACTCACACCACTTTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR TCA 72 bp | TTCTCTGATCCAACCCAGGGCAGCTCACTCTCAAGGTaGAGCCCAGACAGTTCATGCAAAACTCAACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: FSDPTQGSSLSR*SPDSSCKTQPL Trigger: CAGTGGTTGAGTTTTGCATGAACTGTCTGGGCTTCACCTTGAGAGTGAGCTGCCCTGGGTTGGATCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR GCA 72 bp | TTCCTACTGGGGCACAGCCCTTGCTGTTGGCTAGGATaGAGGTTAGTCTGCAAGATGACGTCATATCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLLGHSPCCWLG*RLVCKMTSYPV Trigger: TACTGGATATGACGTCATCTTGCAGACTAACCTGCATCCTAGCCAACAGCAAGGGCTGTGCCCCAGTAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR GCA 72 bp | ACTGATGGTCTTGAGAAGTCTGGCACAGCATACAGATaGCATTTGCTGACAGTGAGACTCCTGCTATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TDGLEKSGTAYR*HLLTVRLLLWD Trigger: GTCCCATAGCAGGAGTCTCACTGTCAGCAAATGGCATCTGTATGCTGTGCCAGACTTCTCAAGACCATCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR GCA 72 bp | GGACGTCTCCTGAGAAAGAATCCCTTTGACATTCTGTaGCTCACTTATGGGCACAAGGTCACGAGCCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: GRLLRKNPFDIL*LTYGHKVTSQT Trigger: TGTTTGGCTCGTGACCTTGTGCCCATAAGTGAGGCACAGAATGTCAAAGGGATTCTTTCTCAGGAGACGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR CCA 72 bp | CTAACCTCCTATTATAGCCTTTGCCTTTTGGTGAACTaGCCAGAAAGGAAGGCCCTGGCCCTGGAGACATTA | + |
|
Preference number: 3 (lower is better) Translates to: LTSYYSLCLLVN*PERKALALETL Trigger: TAATGTCTCCAGGGCCAGGGCCTTCCTTTCTGGCCAGTTCACCAAAAGGCAAAGGCTATAATAGGAGGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTCAAAGTGGTGTGAGTAGTTGTGTGCCCAAGCCACGTCTCTCTCTGCTCAGGTTTTCTATCATTTCTTaGCAGGAAACGTCCCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: AQSGVSSCVPKPRLSLLRFSIIS*QETSLF Trigger: GAACAGGGACGTTTCCTGCAAAGAAATGATAGAAAA...CCTGAGCAGAGAGAGACGTGGCTTGGGCACACAACTACTCACACCACTTTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCAATCCAAAGCTGGGGCATCCTCTCCTGGGAACAGTACCAATTTGGCTTTATAGCCTTTGCCTTTaGGTGAACTGGCCAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KPNPKLGHPLLGTVPIWLYSLCL*VNWPER Trigger: CCTTTCTGGCCAGTTCACCAAAAGGCAAAGGCTATA...AAGCCAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGCGCCAACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATGCGAAGGTTAGGGGTCCAGAATTaGAGGGTGGTAACATGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KERQPETRYQRTEYKMRRLGVQN*RVVTCL Trigger: GAGACATGTTACCACCCTCAAATTCTGGACCCCTAA...CCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTTGGCGCTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR TCA 72 bp | AATGTCTTTGCCAGCATGGGGAATCCTGTCAGCTGCTaGTATTGGAGACATGGGATAGGCACTGATGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NVFASMGNPVSC*YWRHGIGTDGL Trigger: AAGACCATCAGTGCCTATCCCATGTCTCCAATATCAGCAGCTGACAGGATTCCCCATGCTGGCAAAGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR CCA 72 bp | TCGGTGTCTGCAGAAGGATCTTCTAGGTACCAAACCTaGGTCCAGCCCAAGTGGAAACCCTTTACAAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SVSAEGSSRYQT*VQPKWKPFTKT Trigger: TGTTTTTGTAAAGGGTTTCCACTTGGGCTGGACCCAGGTTTGGTACCTAGAAGATCCTTCTGCAGACACCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAAACCCAATCCAAAGCTGGGGCATCCTCTCCTGGGAACAGTACCAATTTGCCTTTCTCTCCAAAGTaGGCAAAGTTTAAGGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LQTQSKAGASSPGNSTNLPFSPK*AKFKDV Trigger: GACATCCTTAAACTTTGCCAACTTTGGAGAGAAAGG...CAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGAAAAGCATTGGGTATTCTTAAGCCCATAAGAGAGCTGAGGCTTCCTGATAGCTCCCATAAGGCATaGCAGCCATCAGAAAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SGKALGILKPIRELRLPDSSHKA*QPSESV Trigger: CACACTTTCTGATGGCTGCAATGCCTTATGGGAGCT...ATCAGGAAGCCTCAGCTCTCTTATGGGCTTAAGAATACCCAATGCTTTTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
||
| 3UTR TCA 72 bp | GGACAAGCACCGTCAATGAACTGGGCACTGACTGTTTaGCACCCTTTCTCTCCAAAGTTGGCAAAGTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GQAPSMNWALTV*HPFSPKLAKFK Trigger: CTTAAACTTTGCCAACTTTGGAGAGAAAGGGTGTCAAACAGTCAGTGCCCAGTTCATTGACGGTGCTTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR GCA 72 bp | AACCCGAAACTCGTTATCAGAGAACAGAGTACAAGATaGGAAGGTCCTCGGTGTCTGCAGAAGGATCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: NPKLVIREQSTR*EGPRCLQKDLL Trigger: TAGAAGATCCTTCTGCAGACACCGAGGACCTTCGCATCTTGTACTCTGTTCTCTGATAACGAGTTTCGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACATTTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATGGAGTCTTGATTCTCTaGAATCAGGACAAGTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: KHLHSPATVLWGRLLRKNGVLIL*NQDKYL Trigger: CAAATACTTGTCCTGATTCAAGAGAATCAAGACTCC...ATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAAATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR TCA 72 bp | TCACCTCAACTTCAGCTCAATCGTTCTCTGTTTGTTTaGCCTGTAGTGAGTGGACGAATGTCTTTGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPQLQLNRSLFV*PVVSGRMSLPA Trigger: TGCTGGCAAAGACATTCGTCCACTCACTACAGGTCAAACAAACAGAGAACGATTGAGCTGAAGTTGAGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR GCA 72 bp | TCAATTCTGTACCTGTATAAAACATTTGCACAGCCCTaGCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SILYLYKTFAQP*HCPLGTSPEKE Trigger: TTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAAATGTTTTATACAGGTACAGAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR CCA 72 bp | TGTATAAAACATTTGCACAGCCCTGCCACTGTCCTTTaGGGACGTCTCCTGAGAAAGAATCCCTTTGACATT | + |
|
Preference number: 3 (lower is better) Translates to: CIKHLHSPATVL*GRLLRKNPFDI Trigger: AATGTCAAAGGGATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAAATGTTTTATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR CCA 72 bp | TCTCTCTTACAGGAGTTCACTTTTCAGTTTAAGCAGTaGTCCAGCTGTGCATCTCTGATCTCCCTCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLLQEFTFQFKQ*SSCASLISLRK Trigger: TTTTCTGAGGGAGATCAGAGATGCACAGCTGGACCACTGCTTAAACTGAAAAGTGAACTCCTGTAAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR CCA 72 bp | GTGAGAGATAAGAAAATGGGGGTTGGGAACAGAATTTaGGGAGTAGCCATAAGGACACTACATCCTATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VRDKKMGVGNRI*GVAIRTLHPMS Trigger: AGACATAGGATGTAGTGTCCTTATGGCTACTCCCCAAATTCTGTTCCCAACCCCCATTTTCTTATCTCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR TCA 72 bp | GTGGTAACATGTCTCTGCCTGGTTTGCTACAACCTATaGTTAGCTGCTATTAACAGAAGTCTTCCCTACAAT | + |
|
Preference number: 3 (lower is better) Translates to: VVTCLCLVCYNL*LAAINRSLPYN Trigger: ATTGTAGGGAAGACTTCTGTTAATAGCAGCTAATCATAGGTTGTAGCAAACCAGGCAGAGACATGTTACCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR TCA 72 bp | AAACCATATTTACACATATACAAACCCGCTCACCTGTaGGAGATAAGAAAATGGGGGTTGGGAACAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: KPYLHIYKPAHL*EIRKWGLGTEF Trigger: AAATTCTGTTCCCAACCCCCATTTTCTTATCTCTCACAGGTGAGCGGGTTTGTATATGTGTAAATATGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR CCA 90 bp | AATCCCTGGCTGACCACCACTGCCTCCTTACGCCTCGCCCGGAATGCTACGGAGATAGGAGCCAGGGAGTaGAACCGCTCCTGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NPWLTTTASLRLARNATEIGARE*NRSWPA Trigger: CGCTGGCCAGGAGCGGTTCCACTCCCTGGCTCCTAT...CTCCGTAGCATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGCCAGGGATT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR CCA 90 bp | TTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATCCCTTTCTGAGGGCCCAAGGGTaGGATCTGGCGGCTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHSPATVLWGRLLRKNPFLRAQG*DLAADS Trigger: GGAATCAGCCGCCAGATCCCACCCTTGGGCCCTCAG...AAAGGGATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAAAGTGGTGTGAGTAGTTGTGTGCCCAAGCCACGTCTCTCTCTGCTCAGGTGGTCTCCACCACGATaGCACCTATGGATTCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AQSGVSSCVPKPRLSLLRWSPPR*HLWIQR Trigger: ACGCTGAATCCATAGGTGCCATCGTGGTGGAGACCA...CCTGAGCAGAGAGAGACGTGGCTTGGGCACACAACTACTCACACCACTTTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR CCA 90 bp | AAACATTTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATTGGCATTCTTCGCGCTaGTCTCCACCACGATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KHLHSPATVLWGRLLRKNWHSSR*SPPRWH Trigger: GTGCCATCGTGGTGGAGACCAGCGCGAAGAATGCCA...ATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAAATGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| 3UTR CAA 72 bp | TCAGGAAAGAACGGGATTCCTACTGGGGCACAGCCCTaGCTGTTGGCTAGGATGCAGGTTAGTCTGCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGKNGIPTGAQP*LLARMQVSLQD Trigger: ATCTTGCAGACTAACCTGCATCCTAGCCAACAGCAAGGGCTGTGCCCCAGTAGGAATCCCGTTCTTTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR TCA 90 bp | AAACCCAATCCAAAGCTGGGGCATCCTCTCCTGGGAACAGTACCAATTTGGCTTCTGGCTTGCAAGCTCTaGTTCCCAAGCTTGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPNPKLGHPLLGTVPIWLLACKL*FPSLIP Trigger: CGGGATCAAGCTTGGGAATCAGAGCTTGCAAGCCAG...AAGCCAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR GCA 90 bp | CTGCAAACCCAATCCAAAGCTGGGGCATCCTCTCCTGGGAACAGTACCAATTTGCAAAACGACACACAATaGTGGATTTCCCAACCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LQTQSKAGASSPGNSTNLQNDTQ*WISQPP Trigger: CGGGGGTTGGGAAATCCAGCATTGTGTGTCGTTTTG...CAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR GCA 90 bp | GCTCAAAGTGGTGTGAGTAGTTGTGTGCCCAAGCCACGTCTCTCTCTGCTCAGGTTTGGTCATGAAAGATaGCCCAATAGTGGGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQSGVSSCVPKPRLSLLRFGHER*PNSGAD Trigger: ATCAGCCCCACTATTGGGGCATCTTTCATGACCAAA...CCTGAGCAGAGAGAGACGTGGCTTGGGCACACAACTACTCACACCACTTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCAATCCAAAGCTGGGGCATCCTCTCCTGGGAACAGTACCAATTTGGCTTATGTTTTCTGGGCCGTaGTCCTTCAGCTCCTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KPNPKLGHPLLGTVPIWLMFSGP*SFSSLT Trigger: GGTCAAGGAGCTGAAGGAGCACGGCCCAGAAAACAT...AAGCCAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR TCA 90 bp | TTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATCCCTTTATGTTGTGGTCAAAGTaGTCCTGGACAAAACGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LHSPATVLWGRLLRKNPFMLWSK*SWTKRH Trigger: GTGTCGTTTTGTCCAGGATCACTTTGACCACAACAT...AAAGGGATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR GCA 90 bp | AAACATTTGCACAGCCCTGCCACTGTCCTTTGGGGACGTCTCCTGAGAAAGAATATAGACGATGACGGCTaGAGCAGATCCTCGGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KHLHSPATVLWGRLLRKNIDDDG*SRSSVV Trigger: TACTACCGAGGATCTGCTGCAGCCGTCATCGTCTAT...ATTCTTTCTCAGGAGACGTCCCCAAAGGACAGTGGCAGGGCTGTGCAAATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCAATCCAAAGCTGGGGCATCCTCTCCTGGGAACAGTACCAATTTGGCTTAACGACACACAATGCTaGATTTCCCAACCCCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: KPNPKLGHPLLGTVPIWLNDTQC*ISQPPC Trigger: ACACGGGGGTTGGGAAATCCAGCATTGTGTGTCGTT...AAGCCAAATTGGTACTGTTCCCAGGAGAGGATGCCCCAGCTTTGGATTGGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| 3UTR CAA 72 bp | ATGTCTTCTGATTTCACACCTTTAGGGGTCCAGAATTaGAGGGTGGTAACATGTCTCTGCCTGGTTTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: MSSDFTPLGVQN*RVVTCLCLVCY Trigger: GTAGCAAACCAGGCAGAGACATGTTACCACCCTCAAATTCTGGACCCCTAAAGGTGTGAAATCAGAAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| CDS-3UTR TCA 90 bp | TCAGGAAAAGCATTGGGTATTCTTAAGCCCATAAGAGAGCTGAGGCTTCCTGATATGTTGTGGTCAAAGTaGTCCTGGACAAAACGACAC | + |
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Preference number: 4 (lower is better) Translates to: SGKALGILKPIRELRLPDMLWSK*SWTKRH Trigger: GTGTCGTTTTGTCCAGGATCACTTTGACCACAACAT...ATCAGGAAGCCTCAGCTCTCTTATGGGCTTAAGAATACCCAATGCTTTTCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
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| 3UTR CAA 72 bp | ACTCCTGCTATGGGACATGTAGGAGTCTTGATTCTCTaGAATCAGGACAAGTATTTGCTATCCCCTGTATTC | + |
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Preference number: 4 (lower is better) Translates to: TPAMGHVGVLIL*NQDKYLLSPVF Trigger: GAATACAGGGGATAGCAAATACTTGTCCTGATTCAAGAGAATCAAGACTCCTACATGTCCCATAGCAGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| CDS-3UTR GCA 90 bp | GAATGCAAGTTAACTATCTCAGGAAAAGCATTGGGTATTCTTAAGCCCATAAGACAAAACGACACACAATaGTGGATTTCCCAACCCCCG | + |
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Preference number: 4 (lower is better) Translates to: ECKLTISGKALGILKPIRQNDTQ*WISQPP Trigger: CGGGGGTTGGGAAATCCAGCATTGTGTGTCGTTTTG...TCTTATGGGCTTAAGAATACCCAATGCTTTTCCTGAGATAGTTAACTTGCATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
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| CDS-3UTR CCA 90 bp | GAATGCAAGTTAACTATCTCAGGAAAAGCATTGGGTATTCTTAAGCCCATAAGAAACGACACACAATGCTaGATTTCCCAACCCCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: ECKLTISGKALGILKPIRNDTQC*ISQPPC Trigger: ACACGGGGGTTGGGAAATCCAGCATTGTGTGTCGTT...TCTTATGGGCTTAAGAATACCCAATGCTTTTCCTGAGATAGTTAACTTGCATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
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| 3UTR CAA 72 bp | AAACTTGAATGCAAGTTAACTATCTCAGGAAAAGCATaGGGTATTCTTAAGCCCATAAGAGAGCTGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: KLECKLTISGKA*GILKPIRELRL Trigger: AAGCCTCAGCTCTCTTATGGGCTTAAGAATACCCAATGCTTTTCCTGAGATAGTTAACTTGCATTCAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
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| CDS-3UTR CAA 90 bp | CAGCCAGAATCCCTGGCTGACCACCACTGCCTCCTTACGCCTCGCCCGGAATGCCCACAAGGCACGGTTTaGGTCATGAAAGATGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: QPESLADHHCLLTPRPECPQGTV*VMKDAP Trigger: TGGGGCATCTTTCATGACCAAAACCGTGCCTTGTGG...GCATTCCGGGCGAGGCGTAAGGAGGCAGTGGTGGTCAGCCAGGGATTCTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| CDS-3UTR CAA 90 bp | CCACGGGTGGGGTCCTTGTGTGTGCACTGGACACCAACAAAGAGGGCTCTGGCTCTGGCGGCTGATTCCTaGAAAGAGCTCCTCGATGTT | + |
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Preference number: 5 (lower is better) Translates to: PRVGSLCVHWTPTKRALALAADS*KELLDV Trigger: AACATCGAGGAGCTCTTTCAAGGAATCAGCCGCCAG...AGCCAGAGCCCTCTTTGTTGGTGTCCAGTGCACACACAAGGACCCCACCCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| CDS-3UTR CAA 90 bp | AGCAGGGCAGGAAGTAGAATGTCTCCCATAAGGCATTGCAGCTCCCATAAGGCACCGAGAAGACACACTTaGAGCTCCCGTATCGCCATC | + |
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Preference number: 5 (lower is better) Translates to: SRAGSRMSPIRHCSSHKAPRRHT*SSRIAI Trigger: GATGGCGATACGGGAGCTCAAAGTGTGTCTTCTCGG...TGCCTTATGGGAGCTGCAATGCCTTATGGGAGACATTCTACTTCCTGCCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
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| CDS-3UTR CAA 90 bp | CTCAAGGTGAAGCCCAGACAGTTCATGCAAAACTCAACCACTGCAAACCCAATCCCGAGAAGACACACTTaGAGCTCCCGTATCGCCATC | + |
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Preference number: 5 (lower is better) Translates to: LKVKPRQFMQNSTTANPIPRRHT*SSRIAI Trigger: GATGGCGATACGGGAGCTCAAAGTGTGTCTTCTCGG...GATTGGGTTTGCAGTGGTTGAGTTTTGCATGAACTGTCTGGGCTTCACCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| CDS TCA 90 bp | CACAGCAAACTTAAGCCAATAGTGGGGCTGATGTTGTGGTCAAAGTaGTCCTGGACAAAACGACACACAATGCTGGATTTCCCAACCCCC | + |
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Preference number: 5 (lower is better) Translates to: HSKLKPIVGLMLWSK*SWTKRHTMLDFPTP Trigger: GGGGGTTGGGAAATCCAGCATTGTGTGTCGTTTTGTCCAGGATCACTTTGACCACAACATCAGCCCCACTATTGGCTTAAGTTTGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
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| CDS CAA 72 bp | CTGAGGGCCCAAGGGTGGGATCTGGCGGCTGATTCCTaGAAAGAGCTCCTCGATGTTAATGGCATTCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: LRAQGWDLAADS*KELLDVNGILR Trigger: GCGAAGAATGCCATTAACATCGAGGAGCTCTTTCAAGGAATCAGCCGCCAGATCCCACCCTTGGGCCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070673.9 |
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| CDS TCA 72 bp | CTTAAGCCAATAGTGGGGCTGATGTTGTGGTCAAAGTaGTCCTGGACAAAACGACACACAATGCTGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: LKPIVGLMLWSK*SWTKRHTMLDF Trigger: GAAATCCAGCATTGTGTGTCGTTTTGTCCAGGATCACTTTGACCACAACATCAGCCCCACTATTGGCTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233258.2 |
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