Pregenerated sensors for RAB30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030643Ensembl transcript IDs: ENSMUST00000032879.15, ENSMUST00000107179.2, ENSMUST00000107180.8, ENSMUST00000208945.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGGCCTGCAGTCAAGGCCCTTGGCCTGCATGCTTGGTAAGCTCTaGAGCCTACAGGAGTCAGAAGGTCCAAGAGCGGGAGCCATAGTC | + |
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Preference number: 1 (lower is better) Translates to: AGLQSRPLACMLGKL*SLQESEGPRAGAIV Trigger: GACTATGGCTCCCGCTCTTGGACCTTCTGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAGGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| 3UTR TCA 90 bp | ACCCAGAGGGAGATGGACCTGTGGCAGAGCTCTCTGAGCTGCTTCTaGACTCGAAGGGACAGATGGGGGTGCTATAAGCCCAAAGGAATG | + |
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Preference number: 1 (lower is better) Translates to: TQREMDLWQSSLSCF*TRRDRWGCYKPKGM Trigger: CATTCCTTTGGGCTTATAGCACCCCCATCTGTCCCTTCGAGTTCAGAAGCAGCTCAGAGAGCTCTGCCACAGGTCCATCTCCCTCTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR TCA 90 bp | AAGACTCAGAGACCCAGAGGGAGATGGACCTGTGGCAGAGCTCTCTaGGCTGCTTCTGAACTCGAAGGGACAGATGGGGGTGCTATAAGC | + |
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Preference number: 1 (lower is better) Translates to: KTQRPRGRWTCGRAL*AASELEGTDGGAIS Trigger: GCTTATAGCACCCCCATCTGTCCCTTCGAGTTCAGAAGCAGCTCAGAGAGCTCTGCCACAGGTCCATCTCCCTCTGGGTCTCTGAGTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | CCAAGGCTAGTTCCCGAAAGGAAAAGGCGTGACCTGTTAGAGAGCTaGACTCTGTCTGGAAGTCTGCCCTGCAGTCAGTCCATAGTCCAC | + |
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Preference number: 1 (lower is better) Translates to: PRLVPERKRRDLLES*TLSGSLPCSQSIVH Trigger: GTGGACTATGGACTGACTGCAGGGCAGACTTCCAGACAGAGTGCAGCTCTCTAACAGGTCACGCCTTTTCCTTTCGGGAACTAGCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | GACTGCAAAAGGGTGAAACCATTATGTGTTCTGCTAATGCTGGCCTaGAGTCAAGGCCCTTGGCCTGCATGCTTGGTAAGCTCTGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: DCKRVKPLCVLLMLA*SQGPWPACLVSSGA Trigger: GGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAGGCCAGCATTAGCAGAACACATAATGGTTTCACCCTTTTGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| 3UTR GCA 90 bp | AAGTTGATGCTGTGGGCTAGCTCAAAGAGTAGACTGGCAAGTCCCTaGTCTAACACCGGGAATCACTCGGGTCCTTCCAGGTACACTCTG | + |
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Preference number: 1 (lower is better) Translates to: KLMLWASSKSRLASP*SNTGNHSGPSRYTL Trigger: CAGAGTGTACCTGGAAGGACCCGAGTGATTCCCGGTGTTAGAGCAGGGACTTGCCAGTCTACTCTTTGAGCTAGCCCACAGCATCAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR CCA 90 bp | AAACCATTATGTGTTCTGCTAATGCTGGCCTGCAGTCAAGGCCCTTaGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: KPLCVLLMLACSQGP*PACLVSSGAYRSQK Trigger: CTTCTGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAGGCCAGCATTAGCAGAACACATAATGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| 3UTR GCA 90 bp | AGGCGTGACCTGTTAGAGAGCTGCACTCTGTCTGGAAGTCTGCCCTaGAGTCAGTCCATAGTCCACAGTATTTTGGTCATATCTGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: RRDLLESCTLSGSLP*SQSIVHSILVISAL Trigger: CAGAGCAGATATGACCAAAATACTGTGGACTATGGACTGACTGCAGGGCAGACTTCCAGACAGAGTGCAGCTCTCTAACAGGTCACGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR TCA 90 bp | GCAGCTATGACAGTGAACAAACTGGAAGGCATCAAGCCACGGCACTaGAGAAACAGGAAGTCATTCAGCAGCACGTGTCCCAACTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: AAMTVNKLEGIKPRH*RNRKSFSSTCPNLS Trigger: ACTCAAGTTGGGACACGTGCTGCTGAATGACTTCCTGTTTCTTCAGTGCCGTGGCTTGATGCCTTCCAGTTTGTTCACTGTCATAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | CCCACCTCAGCTTCCCAAGTACCTGGGACTAAAGTCACATGTCACTaGTCCAACTGCCAAGGCCTATTCTTAACTAAGAGGAGAGAAAAC | + |
|
Preference number: 1 (lower is better) Translates to: PTSASQVPGTKVTCH*SNCQGLFLTKRREN Trigger: GTTTTCTCTCCTCTTAGTTAAGAATAGGCCTTGGCAGTTGGAGCAGTGACATGTGACTTTAGTCCCAGGTACTTGGGAAGCTGAGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | TCGGGTCCTTCCAGGTACACTCTGATGAAGAGAAGAGAAAGATTCTaGTTTCTTCCTCCCTCCATCGAGCCTCACTGCTTTCAATCATAC | + |
|
Preference number: 1 (lower is better) Translates to: SGPSRYTLMKRRERF*FLPPSIEPHCFQSY Trigger: GTATGATTGAAAGCAGTGAGGCTCGATGGAGGGAGGAAGAAAGCAGAATCTTTCTCTTCTCTTCATCAGAGTGTACCTGGAAGGACCCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | CAACATGCTCTGCAGATCATGGAGCGCTTAGTGCAATTTTCTCCTTaGTCCAACGCCAGACTGCAAAAGGGTGAAACCATTATGTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: QHALQIMERLVQFSP*SNARLQKGETIMCS Trigger: AGAACACATAATGGTTTCACCCTTTTGCAGTCTGGCGTTGGAGCAAGGAGAAAATTGCACTAAGCGCTCCATGATCTGCAGAGCATGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| 3UTR CCA 90 bp | TGTCTGAGCTACCAGTCATCACTGACCAAGAATTTAATCAGAACATaGCTCAGCCTCTGTCATTCTCCTCTAACTCAGCTGGGGGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: CLSYQSSLTKNLIRT*LSLCHSPLTQLGEK Trigger: TTTTTCCCCCAGCTGAGTTAGAGGAGAATGACAGAGGCTGAGCCATGTTCTGATTAAATTCTTGGTCAGTGATGACTGGTAGCTCAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR TCA 90 bp | ACCATCAATACCGACAGCGGAATTTCCCGTCATATCCTCATTCAGTaGCTCATACTCAGTTATGCTATACAGCAAGCTTCAGCAACACCA | + |
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Preference number: 1 (lower is better) Translates to: TINTDSGISRHILIQ*LILSYAIQQASATP Trigger: TGGTGTTGCTGAAGCTTGCTGTATAGCATAACTGAGTATGAGTCACTGAATGAGGATATGACGGGAAATTCCGCTGTCGGTATTGATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | CTGGGCCAATCCTCTCAACTCTATAGGTCCTGTGCACATTTTCTTTaGTCAGTTTGTATCTATCATTTGTTTGACAGGAAGGCGGCTACT | + |
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Preference number: 1 (lower is better) Translates to: LGQSSQLYRSCAHFL*SVCIYHLFDRKAAT Trigger: AGTAGCCGCCTTCCTGTCAAACAAATGATAGATACAAACTGAGCAAAGAAAATGTGCACAGGACCTATAGAGTTGAGAGGATTGGCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR CCA 90 bp | AAAGGGAAGACAGTTCAAACTTGTAGGAAGCCTTTTTCTTTCCTGTaGAATCAAGAAGAGCACAGTGAGCCAATCAACACCAACGACTGG | + |
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Preference number: 1 (lower is better) Translates to: KGKTVQTCRKPFSFL*NQEEHSEPINTNDW Trigger: CCAGTCGTTGGTGTTGATTGGCTCACTGTGCTCTTCTTGATTCCACAGGAAAGAAAAAGGCTTCCTACAAGTTTGAACTGTCTTCCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | TCTGAAAACAGCAACTTTGCTCATGCACTACTTGAGAAAGATTTGTaGATCTCGTTTCCACACCATCAAAGGAGTGCTAACATCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SENSNFAHALLEKDL*ISFPHHQRSANIRQ Trigger: CTGCCTGATGTTAGCACTCCTTTGATGGTGTGGAAACGAGATGCACAAATCTTTCTCAAGTAGTGCATGAGCAAAGTTGCTGTTTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR TCA 90 bp | TTAAGGAACCCTCATCGAAATGGACTTCTTTTCTTTGTAACAGACTaGCCCAAATCATTCCTTACAGTCTTGAGATGGAGTCTCCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: LRNPHRNGLLFFVTD*PKSFLTVLRWSLLC Trigger: GCACAGGAGACTCCATCTCAAGACTGTAAGGAATGATTTGGGTCAGTCTGTTACAAAGAAAAGAAGTCCATTTCGATGAGGGTTCCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | TCTGCCCTGCAGTCAGTCCATAGTCCACAGTATTTTGGTCATATCTaGTCTGTTTTCTCATGCTACTCAACATGTCCTACAACTAATCTT | + |
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Preference number: 1 (lower is better) Translates to: SALQSVHSPQYFGHI*SVFSCYSTCPTTNL Trigger: AAGATTAGTTGTAGGACATGTTGAGTAGCATGAGAAAACAGAGCAGATATGACCAAAATACTGTGGACTATGGACTGACTGCAGGGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | CCACTGATAGGACACATGGGGGTAAAAATCAGGTTCGAAATGATTTaGAGCTGTTTGTTCAGAATTAGTCTAAGTGAAGTTGATGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PLIGHMGVKIRFEMI*SCLFRISLSEVDAV Trigger: CACAGCATCAACTTCACTTAGACTAATTCTGAACAAACAGCTGCAAATCATTTCGAACCTGATTTTTACCCCCATGTGTCCTATCAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR TCA 90 bp | TGGTGGCTTGTTAATTATAGTAAGACTAAGGGAAGAGAATTACCATaGGTTCAAAGCCAGCCTGAACTACATTGTGATTTCTATGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: WWLVNYSKTKGRELP*VQSQPELHCDFYAS Trigger: GCTGGCATAGAAATCACAATGTAGTTCAGGCTGGCTTTGAACTCATGGTAATTCTCTTCCCTTAGTCTTACTATAATTAACAAGCCACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | GCATCGTATGTTATCCTTATGCTGAAAGTCATGCATTACAGTGTGTaGAATAACATACAGGGCACACTTTCTTCAAAGTCTTGTCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: ASYVILMLKVMHYSV*NNIQGTLSSKSCLC Trigger: ACAAAGACAAGACTTTGAAGAAAGTGTGCCCTGTATGTTATTGCACACACTGTAATGCATGACTTTCAGCATAAGGATAACATACGATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 90 bp | ATTCTGGACTCTGTTAGAAATGCTAGAAATGTGTTATCAATATCCTaGCCTGTTGAATCATTGCTTTACAATTCAGTAGCTTTCCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: ILDSVRNARNVLSIS*PVESLLYNSVAFQE Trigger: CTCTTGGAAAGCTACTGAATTGTAAAGCAATGATTCAACAGGGCAGGATATTGATAACACATTTCTAGCATTTCTAACAGAGTCCAGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR CAA 90 bp | GAAACCATTATGTGTTCTGCTAATGCTGGCCTGCAGTCAAGGCCCTaGGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ETIMCSANAGLQSRP*ACMLGKLWSLQESE Trigger: TTCTGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAGGCCAGCATTAGCAGAACACATAATGGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGTTTTGGTTTACCTGGTAGTCAAGAAATCCATGGGCACCAGATTACCACTGGCCCTTGGCCTGCATaGTTGGTAAGCTCTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SSFGLPGSQEIHGHQITTGPWPA*LVSSGA Trigger: GGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCC...AGTGGTAATCTGGTGCCCATGGATTTCTTGACTACCAGGTAAACCAAAACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGTTTTGGTTTACCTGGTAGTCAAGAAATCCATGGGCACCAGATTACCACTCTGCTAATGCTGGCCTaGAGTCAAGGCCCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SSFGLPGSQEIHGHQITTLLMLA*SQGPWP Trigger: AGGCCAAGGGCCTTGACTGCAGGCCAGCATTAGCAG...AGTGGTAATCTGGTGCCCATGGATTTCTTGACTACCAGGTAAACCAAAACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| 3UTR-3UTR TCA 90 bp | AAACCCCCAACTAATTTTTCTATTGTAGGGCTGCACACAGCCAGCCTAGTGCCTTCAAGAAGAGCACAGTaGGCCAATCAACACCAACGA | + |
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Preference number: 2 (lower is better) Translates to: KPPTNFSIVGLHTASLVPSRRAQ*ANQHQR Trigger: TCGTTGGTGTTGATTGGCTCACTGTGCTCTTCTTGA...AGGCACTAGGCTGGCTGTGTGCAGCCCTACAATAGAAAAATTAGTTGGGGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR-3UTR GCA 90 bp | ACATCTTGTCAGAGAAGGAGATGTGAAACACACCTGTCAAGACCATGCTTGAAGAAGGACAGCTCAGCCTaGTTCCTGAGCACACTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TSCQRRRCETHLSRPCLKKDSSA*FLSTLS Trigger: GGAAAGTGTGCTCAGGAAGCAGGCTGAGCTGTCCTT...CTTCAAGCATGGTCTTGACAGGTGTGTTTCACATCTCCTTCTCTGACAAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR-3UTR GCA 90 bp | GGCGAGAAAGACTGGGCATTCTGGACTCTGTTAGAAATGCTAGAAATGTGTTATTCTGGAAGTCTGCCCTaGAGTCAGTCCATAGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GEKDWAFWTLLEMLEMCYSGSLP*SQSIVH Trigger: GTGGACTATGGACTGACTGCAGGGCAGACTTCCAGA...ATAACACATTTCTAGCATTTCTAACAGAGTCCAGAATGCCCAGTCTTTCTCGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR-3UTR TCA 90 bp | GCTCCAACGCCAGACTGCAAAAGGGTGAAACCATTATGTGTTCTGCTAATGCTGCACCAAGGCAACTACTaGTTCCCTTTGATTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: APTPDCKRVKPLCVLLMLHQGNY*FPLILF Trigger: AAAGAGAATCAAAGGGAATCAGTAGTTGCCTTGGTG...CAGCATTAGCAGAACACATAATGGTTTCACCCTTTTGCAGTCTGGCGTTGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGAAAGCAGATAGATTGTTCCCAGATACTGTGGAAGGAGAAGGTTTGGCTACCCGTAAGCCAGTTTaGTTTCAACAGGGACGAACA | + |
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Preference number: 2 (lower is better) Translates to: SQKADRLFPDTVEGEGLATRKPV*FQQGRT Trigger: TGTTCGTCCCTGTTGAAATCAAACTGGCTTACGGGT...AGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR-3UTR CCA 90 bp | ACATCTTGTCAGAGAAGGAGATGTGAAACACACCTGTCAAGACCATGCTTGAAGAAATTCACAGAACTGTaGAACGGAAGGGCCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: TSCQRRRCETHLSRPCLKKFTEL*NGRAQL Trigger: AAGCTGGGCCCTTCCGTTCCACAGTTCTGTGAATTT...CTTCAAGCATGGTCTTGACAGGTGTGTTTCACATCTCCTTCTCTGACAAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR-3UTR TCA 90 bp | AAACCCCCAACTAATTTTTCTATTGTAGGGCTGCACACAGCCAGCCTAGTGCCTTCTCCAAATGTCATTTaGGACTTCCAAAAGCAGATC | + |
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Preference number: 2 (lower is better) Translates to: KPPTNFSIVGLHTASLVPSPNVI*DFQKQI Trigger: GATCTGCTTTTGGAAGTCTCAAATGACATTTGGAGA...AGGCACTAGGCTGGCTGTGTGCAGCCCTACAATAGAAAAATTAGTTGGGGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR-3UTR GCA 90 bp | TCCAGTTTTGGTTTACCTGGTAGTCAAGAAATCCATGGGCACCAGATTACCACTAAAACAAAAGCAACATaGTCTGCAGATCATGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: SSFGLPGSQEIHGHQITTKTKAT*SADHGA Trigger: CGCTCCATGATCTGCAGAGCATGTTGCTTTTGTTTT...AGTGGTAATCTGGTGCCCATGGATTTCTTGACTACCAGGTAAACCAAAACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCCCCAACTAATTTTTCTATTGTAGGGCTGCACACAGCCAGCCTAGTGCCTGTGTTATCAATATCCTaGCCTGTTGAATCATTGCTT | + |
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Preference number: 2 (lower is better) Translates to: KPPTNFSIVGLHTASLVPVLSIS*PVESLL Trigger: AAGCAATGATTCAACAGGGCAGGATATTGATAACAC...AGGCACTAGGCTGGCTGTGTGCAGCCCTACAATAGAAAAATTAGTTGGGGGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR CAA 90 bp | TTTTCTGAAAACAGCAACTTTGCTCATGCACTACTTGAGAAAGATTaGTGCATCTCGTTTCCACACCATCAAAGGAGTGCTAACATCAGG | + |
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Preference number: 2 (lower is better) Translates to: FSENSNFAHALLEKD*CISFPHHQRSANIR Trigger: CCTGATGTTAGCACTCCTTTGATGGTGTGGAAACGAGATGCACAAATCTTTCTCAAGTAGTGCATGAGCAAAGTTGCTGTTTTCAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR-3UTR TCA 90 bp | GTTCACAAAGCAACGTTATTTTTAACACAGTGCTGTGAGACAAGGCTGAGTCATCACCAAGGCAACTACTaGTTCCCTTTGATTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: VHKATLFLTQCCETRLSHHQGNY*FPLILF Trigger: AAAGAGAATCAAAGGGAATCAGTAGTTGCCTTGGTG...ATGACTCAGCCTTGTCTCACAGCACTGTGTTAAAAATAACGTTGCTTTGTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR-3UTR TCA 90 bp | GGCGAGAAAGACTGGGCATTCTGGACTCTGTTAGAAATGCTAGAAATGTGTTATATATCCCAAAGGTTTTaGAAGTGCTTGTGGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: GEKDWAFWTLLEMLEMCYISQRF*KCLWTK Trigger: TTTTGTCCACAAGCACTTTCAAAACCTTTGGGATAT...ATAACACATTTCTAGCATTTCTAACAGAGTCCAGAATGCCCAGTCTTTCTCGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR-3UTR GCA 90 bp | ACATCTTGTCAGAGAAGGAGATGTGAAACACACCTGTCAAGACCATGCTTGAAGTATTTTGGTCATATCTaGTCTGTTTTCTCATGCTAC | + |
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Preference number: 2 (lower is better) Translates to: TSCQRRRCETHLSRPCLKYFGHI*SVFSCY Trigger: GTAGCATGAGAAAACAGAGCAGATATGACCAAAATA...CTTCAAGCATGGTCTTGACAGGTGTGTTTCACATCTCCTTCTCTGACAAGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGAAAGCAGATAGATTGTTCCCAGATACTGTGGAAGGAGAAGGTTTGGCTTTATATTCCTCTCTATaGCATGTCCTACAAAAATCC | + |
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Preference number: 2 (lower is better) Translates to: SQKADRLFPDTVEGEGLALYSSL*HVLQKS Trigger: GGATTTTTGTAGGACATGGCATAGAGAGGAATATAA...AGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR CAA 90 bp | TTATATTTATATGAAAGGCAAATCCATAGTCAGAAAGCAGATAGATaGTTCCCAGATACTGTGGAAGGAGAAGGTTTGGCTGCTAATGGA | + |
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Preference number: 2 (lower is better) Translates to: LYLYERQIHSQKADR*FPDTVEGEGLAANG Trigger: TCCATTAGCAGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACTATGGATTTGCCTTTCATATAAATATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR CAA 90 bp | ATTTCTACCTATAGATGGAGAAGAGTCACAGAACCAGAATTAGTCTaGCTGGGATATCCACTATACATTATTAGTAAAGGGAGAAATGCA | + |
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Preference number: 2 (lower is better) Translates to: ISTYRWRRVTEPELV*LGYPLYIISKGRNA Trigger: TGCATTTCTCCCTTTACTAATAATGTATAGTGGATATCCCAGCAAGACTAATTCTGGTTCTGTGACTCTTCTCCATCTATAGGTAGAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR TCA 72 bp | GAGATGGACCTGTGGCAGAGCTCTCTGAGCTGCTTCTaGACTCGAAGGGACAGATGGGGGTGCTATAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: EMDLWQSSLSCF*TRRDRWGCYKP Trigger: GGGCTTATAGCACCCCCATCTGTCCCTTCGAGTTCAGAAGCAGCTCAGAGAGCTCTGCCACAGGTCCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR GCA 72 bp | CTGTGGGCTAGCTCAAAGAGTAGACTGGCAAGTCCCTaGTCTAACACCGGGAATCACTCGGGTCCTTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LWASSKSRLASP*SNTGNHSGPSR Trigger: CCTGGAAGGACCCGAGTGATTCCCGGTGTTAGAGCAGGGACTTGCCAGTCTACTCTTTGAGCTAGCCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| 3UTR CCA 72 bp | TGTGTTCTGCTAATGCTGGCCTGCAGTCAAGGCCCTTaGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGG | + |
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Preference number: 3 (lower is better) Translates to: CVLLMLACSQGP*PACLVSSGAYR Trigger: CCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAGGCCAGCATTAGCAGAACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| 3UTR GCA 72 bp | GTTCCCGAAAGGAAAAGGCGTGACCTGTTAGAGAGCTaGACTCTGTCTGGAAGTCTGCCCTGCAGTCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VPERKRRDLLES*TLSGSLPCSQS Trigger: GGACTGACTGCAGGGCAGACTTCCAGACAGAGTGCAGCTCTCTAACAGGTCACGCCTTTTCCTTTCGGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR GCA 72 bp | AGGGTGAAACCATTATGTGTTCTGCTAATGCTGGCCTaGAGTCAAGGCCCTTGGCCTGCATGCTTGGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RVKPLCVLLMLA*SQGPWPACLVS Trigger: GCTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAGGCCAGCATTAGCAGAACACATAATGGTTTCACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| 3UTR GCA 72 bp | TCATTCCTTACAGTCTTGAGATGGAGTCTCCTGTGCTaGCTTAGCTCCCACCTCAGCTTCCCAAGTACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SFLTVLRWSLLC*LSSHLSFPSTW Trigger: CCAGGTACTTGGGAAGCTGAGGTGGGAGCTAAGGCAGCACAGGAGACTCCATCTCAAGACTGTAAGGAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | ACAGTGAACAAACTGGAAGGCATCAAGCCACGGCACTaGAGAAACAGGAAGTCATTCAGCAGCACGTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TVNKLEGIKPRH*RNRKSFSSTCP Trigger: GGGACACGTGCTGCTGAATGACTTCCTGTTTCTTCAGTGCCGTGGCTTGATGCCTTCCAGTTTGTTCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR-3UTR CAA 90 bp | ACATCTTGTCAGAGAAGGAGATGTGAAACACACCTGTCAAGACCATGCTTGAAGCTGCAGTCAAGGCCCTaGGCCTGCATGCTTGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSCQRRRCETHLSRPCLKLQSRP*ACMLGK Trigger: CTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAG...CTTCAAGCATGGTCTTGACAGGTGTGTTTCACATCTCCTTCTCTGACAAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTTTTGGTTTACCTGGTAGTCAAGAAATCCATGGGCACCAGATTACCACTCTGCAGTCAAGGCCCTaGGCCTGCATGCTTGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSFGLPGSQEIHGHQITTLQSRP*ACMLGK Trigger: CTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAG...AGTGGTAATCTGGTGCCCATGGATTTCTTGACTACCAGGTAAACCAAAACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAAGCAACATGCTCTGCAGATCATGGAGCGCTTAGTGCAATTTTCTCCTTGCTGCAGTCAAGGCCCTaGGCCTGCATGCTTGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: TKATCSADHGALSAIFSLLQSRP*ACMLGK Trigger: CTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAG...CAAGGAGAAAATTGCACTAAGCGCTCCATGATCTGCAGAGCATGTTGCTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| 3UTR GCA 72 bp | AAATCATTCCTTACAGTCTTGAGATGGAGTCTCCTGTaGTGCCTTAGCTCCCACCTCAGCTTCCCAAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: KSFLTVLRWSLL*CLSSHLSFPST Trigger: GGTACTTGGGAAGCTGAGGTGGGAGCTAAGGCAGCACAGGAGACTCCATCTCAAGACTGTAAGGAATGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | TTCCAAAAGCAGATCTTAAGGATGCCGTCCTCCCTGTaGTCCTCCTGTCCTCTCATGAACACTGAACTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FQKQILRMPSSL*SSCPLMNTELL Trigger: CAACAGTTCAGTGTTCATGAGAGGACAGGAGGATCACAGGGAGGACGGCATCCTTAAGATCTGCTTTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR GCA 72 bp | CTGTTAGAGAGCTGCACTCTGTCTGGAAGTCTGCCCTaGAGTCAGTCCATAGTCCACAGTATTTTGGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: LLESCTLSGSLP*SQSIVHSILVI Trigger: TATGACCAAAATACTGTGGACTATGGACTGACTGCAGGGCAGACTTCCAGACAGAGTGCAGCTCTCTAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR GCA 72 bp | ACACCTCCATCGGAATTGGAGACTTCGAGTAACACGTaGATACCGGTATGGGGAGGAAAGAGAAAAAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TPPSELETSSNT*IPVWGGKRKRR Trigger: CCTTCTTTTTCTCTTTCCTCCCCATACCGGTATGCACGTGTTACTCGAAGTCTCCAATTCCGATGGAGGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CCA 72 bp | ATATCCCAATGGCCTAATCTTAAATTCACAGAACTGTaGAACGGAAGGGCCCAGCTTCTCAAGTGTCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: ISQWPNLKFTEL*NGRAQLLKCPH Trigger: GTGTGGACACTTGAGAAGCTGGGCCCTTCCGTTCCACAGTTCTGTGAATTTAAGATTAGGCCATTGGGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGAAAGCAGATAGATTGTTCCCAGATACTGTGGAAGGAGAAGGTTTGGCTATGTCAGGTCCAGGATaGTCACCATCAATACCGACA | + |
|
Preference number: 3 (lower is better) Translates to: SQKADRLFPDTVEGEGLAMSGPG*SPSIPT Trigger: TGTCGGTATTGATGGTGACAATCCTGGACCTGACAT...AGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | CCTTCACACACTGTTACGACTTTGTTTTCAAATAGCTaGCAATGGGCAATAACAGACAGCAAGTGGGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: PSHTVTTLFSNS*QWAITDSKWDP Trigger: GGGGTCCCACTTGCTGTCTGTTATTGCCCATTGTCAGCTATTTGAAAACAAAGTCGTAACAGTGTGTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CCA 72 bp | ATAGATTGTTCCCAGATACTGTGGAAGGAGAAGGTTTaGCTGCTAATGGATACAGAGCCTTTGGGGAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: IDCSQILWKEKV*LLMDTEPLGND Trigger: GTCATTCCCCAAAGGCTCTGTATCCATTAGCAGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | GTAAAAAGCAGTGTCTCCCCCAGAGTAATTATAACATaGACATCCTGTGATTTAGGAAGGAGGCGAGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: VKSSVSPRVIIT*TSCDLGRRRGT Trigger: GGTTCCTCGCCTCCTTCCTAAATCACAGGATGTTCATGTTATAATTACTCTGGGGGAGACACTGCTTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CCA 72 bp | CTGGTAATAATACACGCAGTCACAGGCGAGAAAGACTaGGCATTCTGGACTCTGTTAGAAATGCTAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: LVIIHAVTGEKD*AFWTLLEMLEM Trigger: CATTTCTAGCATTTCTAACAGAGTCCAGAATGCCCAGTCTTTCTCGCCTGTGACTGCGTGTATTATTACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CCA 72 bp | TACCAGTCATCACTGACCAAGAATTTAATCAGAACATaGCTCAGCCTCTGTCATTCTCCTCTAACTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: YQSSLTKNLIRT*LSLCHSPLTQL Trigger: CAGCTGAGTTAGAGGAGAATGACAGAGGCTGAGCCATGTTCTGATTAAATTCTTGGTCAGTGATGACTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | GCCTTTTTCTTTCCTGTGGAATCAAGAAGAGCACAGTaGGCCAATCAACACCAACGACTGGTAATAATACAC | + |
|
Preference number: 3 (lower is better) Translates to: AFFFPVESRRAQ*ANQHQRLVIIH Trigger: GTGTATTATTACCAGTCGTTGGTGTTGATTGGCTCACTGTGCTCTTCTTGATTCCACAGGAAAGAAAAAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | GAAGGAGATGTGAAACACACCTGTCAAGACCATGCTTaGAGGAAGAAAGGAACCGTCGCTGTTAAAAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: EGDVKHTCQDHA*RKKGTVAVKNS Trigger: AGAATTTTTAACAGCGACGGTTCCTTTCTTCCTTCAAGCATGGTCTTGACAGGTGTGTTTCACATCTCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CCA 72 bp | ATACACGCAGTCACAGGCGAGAAAGACTGGGCATTCTaGACTCTGTTAGAAATGCTAGAAATGTGTTATCAA | + |
|
Preference number: 3 (lower is better) Translates to: IHAVTGEKDWAF*TLLEMLEMCYQ Trigger: TTGATAACACATTTCTAGCATTTCTAACAGAGTCCAGAATGCCCAGTCTTTCTCGCCTGTGACTGCGTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CCA 72 bp | ACAGTTCAAACTTGTAGGAAGCCTTTTTCTTTCCTGTaGAATCAAGAAGAGCACAGTGAGCCAATCAACACC | + |
|
Preference number: 3 (lower is better) Translates to: TVQTCRKPFSFL*NQEEHSEPINT Trigger: GGTGTTGATTGGCTCACTGTGCTCTTCTTGATTCCACAGGAAAGAAAAAGGCTTCCTACAAGTTTGAACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CCA 72 bp | ATAGTCAGAAAGCAGATAGATTGTTCCCAGATACTGTaGAAGGAGAAGGTTTGGCTGCTAATGGATACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IVRKQIDCSQIL*KEKVWLLMDTE Trigger: CTCTGTATCCATTAGCAGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | CAAAACTACAACTTCTTTCAGAAACTAGTAAGAACGTaGTCCCTAGTAAGTACATCCGGCCATGAGATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QNYNFFQKLVRT*SLVSTSGHEMQ Trigger: CTGCATCTCATGGCCGGATGTACTTACTAGGGATCACGTTCTTACTAGTTTCTGAAAGAAGTTGTAGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | TGTCTCCCCCAGAGTAATTATAACATGAACATCCTGTaGTTTAGGAAGGAGGCGAGGAACCATCTATATTAC | + |
|
Preference number: 3 (lower is better) Translates to: CLPQSNYNMNIL*FRKEARNHLYY Trigger: GTAATATAGATGGTTCCTCGCCTCCTTCCTAAATCACAGGATGTTCATGTTATAATTACTCTGGGGGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | GGTTTGGCTGCTAATGGATACAGAGCCTTTGGGGAATaGCATATTCTGAAGTTAGACAGTGACAATGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: GLAANGYRAFGE*HILKLDSDNVQ Trigger: TTGTACATTGTCACTGTCTAACTTCAGAATATGTCATTCCCCAAAGGCTCTGTATCCATTAGCAGCCAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | AATGTAAGAAACCACACCTTTAAAATGCTCCTTCATTaGCTGAATGGTCCTACCAAGTTTAAGGAGTGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: NVRNHTFKMLLH*LNGPTKFKECP Trigger: CGGGCACTCCTTAAACTTGGTAGGACCATTCAGTCAATGAAGGAGCATTTTAAAGGTGTGGTTTCTTACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR-3UTR CAA 90 bp | ACATCTTGTCAGAGAAGGAGATGTGAAACACACCTGTCAAGACCATGCTTGAAGTATATCCCAAAGGTTTaGAAAGTGCTTGTGGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSCQRRRCETHLSRPCLKYIPKV*KVLVDK Trigger: TTTGTCCACAAGCACTTTCAAAACCTTTGGGATATA...CTTCAAGCATGGTCTTGACAGGTGTGTTTCACATCTCCTTCTCTGACAAGATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGAAAGCAGATAGATTGTTCCCAGATACTGTGGAAGGAGAAGGTTTGGCTTCCAGACATCTTGTTTaGGTCAGTGGTTTCTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: SQKADRLFPDTVEGEGLASRHLV*VSGFLI Trigger: TATTAAGAAACCACTGACCAAAACAAGATGTCTGGA...AGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGAAAGCAGATAGATTGTTCCCAGATACTGTGGAAGGAGAAGGTTTGGCTATCTCCAAATGTCATTaGAGACTTCCAAAAGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SQKADRLFPDTVEGEGLAISKCH*RLPKAD Trigger: ATCTGCTTTTGGAAGTCTCAAATGACATTTGGAGAT...AGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGAAAGCAGATAGATTGTTCCCAGATACTGTGGAAGGAGAAGGTTTGGCTCAGCATTCCAATCATTaGAAATGTTTTATGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQKADRLFPDTVEGEGLAQHSNH*KCFMSG Trigger: CCCTGACATAAAACATTTCAAATGATTGGAATGCTG...AGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | CCTCATCGAAATGGACTTCTTTTCTTTGTAACAGACTaGCCCAAATCATTCCTTACAGTCTTGAGATGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PHRNGLLFFVTD*PKSFLTVLRWS Trigger: ACTCCATCTCAAGACTGTAAGGAATGATTTGGGTCAGTCTGTTACAAAGAAAAGAAGTCCATTTCGATGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | AATGTCTCTCAAGGTGTATGGGAAGAAACAGGTGACTaGCATGTAAAAGCAAATCGAATCAGACACTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NVSQGVWEETGD*HVKANRIRHFL Trigger: AAGGAAGTGTCTGATTCGATTTGCTTTTACATGTCAGTCACCTGTTTCTTCCCATACACCTTGAGAGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | GGCGAGGAACCATCTATATTACTCAATAGTAATGACTaGCCTGAAGGGATACTATCATTAACCAATATTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GEEPSILLNSND*PEGILSLTNIA Trigger: GGCAATATTGGTTAATGATAGTATCCCTTCAGGTCAGTCATTACTATTGAGTAATATAGATGGTTCCTCGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | ATTGAGCATAAGAAAAGGTACTGCTATTTAGGATTCTaGGTTTATAGAGCATCTGGGCCAATCCTCTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: IEHKKRYCYLGF*VYRASGPILST Trigger: AGTTGAGAGGATTGGCCCAGATGCTCTATAAACTCAGAATCCTAAATAGCAGTACCTTTTCTTATGCTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | TATCAGACTGGAAAGGGGGCAAGGAGCTTTACAATGTaGTCATTTGGCTCACACATTTTAATTAGCAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: YQTGKGARSFTM*SFGSHILISKH Trigger: ATGTTTGCTAATTAAAATGTGTGAGCCAAATGATCACATTGTAAAGCTCCTTGCCCCCTTTCCAGTCTGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | CAAAAATGTCTCTCAAGGTGTATGGGAAGAAACAGGTaGCTGACATGTAAAAGCAAATCGAATCAGACACTT | + |
|
Preference number: 3 (lower is better) Translates to: QKCLSRCMGRNR*LTCKSKSNQTL Trigger: AAGTGTCTGATTCGATTTGCTTTTACATGTCAGTCACCTGTTTCTTCCCATACACCTTGAGAGACATTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR GCA 72 bp | GGACACATGGGGGTAAAAATCAGGTTCGAAATGATTTaGAGCTGTTTGTTCAGAATTAGTCTAAGTGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GHMGVKIRFEMI*SCLFRISLSEV Trigger: AACTTCACTTAGACTAATTCTGAACAAACAGCTGCAAATCATTTCGAACCTGATTTTTACCCCCATGTGTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR GCA 72 bp | TCCTCTCAACTCTATAGGTCCTGTGCACATTTTCTTTaGTCAGTTTGTATCTATCATTTGTTTGACAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSQLYRSCAHFL*SVCIYHLFDRK Trigger: CTTCCTGTCAAACAAATGATAGATACAAACTGAGCAAAGAAAATGTGCACAGGACCTATAGAGTTGAGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CCA 72 bp | AATCAGACACTTCCTTTTAAGGAACCCTCATCGAAATaGACTTCTTTTCTTTGTAACAGACTGACCCAAATC | + |
|
Preference number: 3 (lower is better) Translates to: NQTLPFKEPSSK*TSFLCNRLTQI Trigger: GATTTGGGTCAGTCTGTTACAAAGAAAAGAAGTCCATTTCGATGAGGGTTCCTTAAAAGGAAGTGTCTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | GTTAATTATAGTAAGACTAAGGGAAGAGAATTACCATaGGTTCAAAGCCAGCCTGAACTACATTGTGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: VNYSKTKGRELP*VQSQPELHCDF Trigger: GAAATCACAATGTAGTTCAGGCTGGCTTTGAACTCATGGTAATTCTCTTCCCTTAGTCTTACTATAATTAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CCA 72 bp | ATAACTGGGATTTATGATATCATTTCTACCTATAGATaGAGAAGAGTCACAGAACCAGAATTAGTCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ITGIYDIISTYR*RRVTEPELVLL Trigger: CAGCAAGACTAATTCTGGTTCTGTGACTCTTCTCCATCTATAGGTAGAAATGATATCATAAATCCCAGTTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR TCA 72 bp | GGCAAAATAATATTTATGTCCTGCCCTAGATTGAAATaGTTCTATCTCAAGAACCACTTTAAGGACTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GKIIFMSCPRLK*FYLKNHFKDFH Trigger: GTGAAAGTCCTTAAAGTGGTTCTTGAGATAGAATCATTTCAATCTAGGGCAGGACATAAATATTATTTTGCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR GCA 72 bp | TCTGTTAGAAATGCTAGAAATGTGTTATCAATATCCTaGCCTGTTGAATCATTGCTTTACAATTCAGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SVRNARNVLSIS*PVESLLYNSVA Trigger: AGCTACTGAATTGTAAAGCAATGATTCAACAGGGCAGGATATTGATAACACATTTCTAGCATTTCTAACAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| CDS-3UTR CCA 90 bp | CTGCAGTCAAGGCCCTTGGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCTTCTGCTCTCTGCTaGGAGACCTCTCGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSRPLACMLGKLWSLQESSALC*ETSRLS Trigger: TGAAAGGCGAGAGGTCTCCCAGCAGAGAGCAGAAGA...CTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCAAGGCCCTTGGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCATCTTCTGCTCTCTGCTaGGAGACCTCTCGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSRPLACMLGKLWSLQESSSALC*ETSRLS Trigger: TGAAAGGCGAGAGGTCTCCCAGCAGAGAGCAGAAGA...TGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| 3UTR CAA 72 bp | ATGTGTTCTGCTAATGCTGGCCTGCAGTCAAGGCCCTaGGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: MCSANAGLQSRP*ACMLGKLWSLQ Trigger: CTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAGGCCAGCATTAGCAGAACACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGGCCCTTGGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCAGAACATGTCCTGAGCCTCTaGGAACTCTTCTGCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRPLACMLGKLWSLQESEHVLSL*ELFCSL Trigger: CAGAGAGCAGAAGAGTTCTCAGAGGCTCAGGACATG...TTCTGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCAGAAGGTCCAAGAGCGCAGTGTGTTCTGTCTTaGTTCGCTGATGAGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACMLGKLWSLQESEGPRAQCVLS*FADESA Trigger: TGCCGACTCATCAGCGAAGCAAGACAGAACACACTG...CGCTCTTGGACCTTCTGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCAAGGCCCTTGGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCAGTCGGATTCCTTGGCTaGAGTCTCCAGGTAATACAT | + |
|
Preference number: 4 (lower is better) Translates to: QSRPLACMLGKLWSLQESVGFLG*SLQVIH Trigger: ATGTATTACCTGGAGACTTCAGCCAAGGAATCCGAC...TGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | ATCTCCATGGGGTCCTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTGAGCGAAATCTCTCTTaGCCTGCGGTGTCCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ISMGSSISTTETVLGLSSERNLS*PAVSQI Trigger: GATCTGGGACACCGCAGGTCAAGAGAGATTTCGCTC...ACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAGGACCCCATGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCAGAAGGTCCAAGAGCGGATAGTAACTTTGAGTaGTGGAGCGAAATCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACMLGKLWSLQESEGPRADSNFE*WSEISL Trigger: AAGAGAGATTTCGCTCCATCACTCAAAGTTACTATC...CGCTCTTGGACCTTCTGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CCA 90 bp | AACGCCAGACTGCAAAAGGGTGAAACCATTATGTGTTCTGCTAATGCTGGCCTGTCTTCTGCTCTCTGCTaGGAGACCTCTCGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NARLQKGETIMCSANAGLSSALC*ETSRLS Trigger: TGAAAGGCGAGAGGTCTCCCAGCAGAGAGCAGAAGA...CAGGCCAGCATTAGCAGAACACATAATGGTTTCACCCTTTTGCAGTCTGGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCTACAGGAGTCAGAAGGTCCAAGAGCGGGAGCCATAGTCATTGCCAGATTCATTGTCGGATTCCTTaGCTGAAGTCTCCAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EPTGVRRSKSGSHSHCQIHCRIP*LKSPGN Trigger: ATTACCTGGAGACTTCAGCCAAGGAATCCGACAATG...AATCTGGCAATGACTATGGCTCCCGCTCTTGGACCTTCTGACTCCTGTAGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | AGTCAGAAAGCAGATAGATTGTTCCCAGATACTGTGGAAGGAGAAGGTTTGGCTGAGCGAAATCTCTCTTaGCCTGCGGTGTCCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SQKADRLFPDTVEGEGLAERNLS*PAVSQI Trigger: GATCTGGGACACCGCAGGTCAAGAGAGATTTCGCTC...AGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| CDS-3UTR GCA 90 bp | GCTCCAACGCCAGACTGCAAAAGGGTGAAACCATTATGTGTTCTGCTAATGCTGCAGTGTGTTCTGTCTTaGTTCGCTGATGAGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: APTPDCKRVKPLCVLLMLQCVLS*FADESA Trigger: TGCCGACTCATCAGCGAAGCAAGACAGAACACACTG...CAGCATTAGCAGAACACATAATGGTTTCACCCTTTTGCAGTCTGGCGTTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGCAACATGCTCTGCAGATCATGGAGCGCTTAGTGCAATTTTCTCCTTGCATGTCCTGAGCCTCTaGGAACTCTTCTGCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKATCSADHGALSAIFSLHVLSL*ELFCSL Trigger: CAGAGAGCAGAAGAGTTCTCAGAGGCTCAGGACATG...CAAGGAGAAAATTGCACTAAGCGCTCCATGATCTGCAGAGCATGTTGCTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | AACGCCAGACTGCAAAAGGGTGAAACCATTATGTGTTCTGCTAATGCTGGCCTGAACAAGTCAAATAGCTaGTGCTTTTCCCCTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NARLQKGETIMCSANAGLNKSNS*CFSPLR Trigger: CCGGAGAGGGGAAAAGCATCAGCTATTTGACTTGTT...CAGGCCAGCATTAGCAGAACACATAATGGTTTCACCCTTTTGCAGTCTGGCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CCA 90 bp | CTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTTTTGGTTTACCTGGTGTGGCTCCTTGACCTaGGGGGAAAAGACCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNKYYRDSTWPFQFWFTWCGSLT*GEKTLS Trigger: ACTCAGGGTCTTTTCCCCCCAGGTCAAGGAGCCACA...CCAGGTAAACCAAAACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032879.15 ENSMUST00000107180.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAAGCAACATGCTCTGCAGATCATGGAGCGCTTAGTGCAATTTTCTCCTTGTGGCTCCTTGACCTaGGGGGAAAAGACCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQKQHALQIMERLVQFSPCGSLT*GEKTLS Trigger: ACTCAGGGTCTTTTCCCCCCAGGTCAAGGAGCCACA...AGGAGAAAATTGCACTAAGCGCTCCATGATCTGCAGAGCATGTTGCTTTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032879.15 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | GGCGAGAAAGACTGGGCATTCTGGACTCTGTTAGAAATGCTAGAAATGTGTTATCATGTCCTGAGCCTCTaGGAACTCTTCTGCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GEKDWAFWTLLEMLEMCYHVLSL*ELFCSL Trigger: CAGAGAGCAGAAGAGTTCTCAGAGGCTCAGGACATG...ATAACACATTTCTAGCATTTCTAACAGAGTCCAGAATGCCCAGTCTTTCTCGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| CDS-3UTR TCA 90 bp | ATCTCCATGGGGTCCTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTAACAAGTCAAATAGCTaGTGCTTTTCCCCTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISMGSSISTTETVLGLSSNKSNS*CFSPLR Trigger: CCGGAGAGGGGAAAAGCATCAGCTATTTGACTTGTT...ACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAGGACCCCATGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGCAACATGCTCTGCAGATCATGGAGCGCTTAGTGCAATTTTCTCCTTGCAGTGTGTTCTGTCTTaGTTCGCTGATGAGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKATCSADHGALSAIFSLQCVLS*FADESA Trigger: TGCCGACTCATCAGCGAAGCAAGACAGAACACACTG...CAAGGAGAAAATTGCACTAAGCGCTCCATGATCTGCAGAGCATGTTGCTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | ACATCTTGTCAGAGAAGGAGATGTGAAACACACCTGTCAAGACCATGCTTGAAGGTCGGATTCCTTGGCTaGAGTCTCCAGGTAATACAT | + |
|
Preference number: 4 (lower is better) Translates to: TSCQRRRCETHLSRPCLKVGFLG*SLQVIH Trigger: ATGTATTACCTGGAGACTTCAGCCAAGGAATCCGAC...CTTCAAGCATGGTCTTGACAGGTGTGTTTCACATCTCCTTCTCTGACAAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| CDS-3UTR CCA 90 bp | ATCTCCATGGGGTCCTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTCATTGTCGGATTCCTTaGCTGAAGTCTCCAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISMGSSISTTETVLGLSSHCRIP*LKSPGN Trigger: ATTACCTGGAGACTTCAGCCAAGGAATCCGACAATG...ACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAGGACCCCATGGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | CTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTTTTGGTTTACCTGGGTCGGATTCCTTGGCTaGAGTCTCCAGGTAATACAT | + |
|
Preference number: 4 (lower is better) Translates to: LNKYYRDSTWPFQFWFTWVGFLG*SLQVIH Trigger: ATGTATTACCTGGAGACTTCAGCCAAGGAATCCGAC...CCAGGTAAACCAAAACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR TCA 90 bp | CTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTTTTGGTTTACCTGGAACAAGTCAAATAGCTaGTGCTTTTCCCCTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LNKYYRDSTWPFQFWFTWNKSNS*CFSPLR Trigger: CCGGAGAGGGGAAAAGCATCAGCTATTTGACTTGTT...CCAGGTAAACCAAAACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| 3UTR CAA 72 bp | AGTCTGCCCTGCAGTCAGTCCATAGTCCACAGTATTTaGGTCATATCTGCTCTGTTTTCTCATGCTACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPCSQSIVHSI*VISALFSHATQ Trigger: TTGAGTAGCATGAGAAAACAGAGCAGATATGACCAAAATACTGTGGACTATGGACTGACTGCAGGGCAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| CDS-3UTR TCA 90 bp | ATCTCCATGGGGTCCTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTGATAGTAACTTTGAGTaGTGGAGCGAAATCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISMGSSISTTETVLGLSSDSNFE*WSEISL Trigger: AAGAGAGATTTCGCTCCATCACTCAAAGTTACTATC...ACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAGGACCCCATGGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAAGCAACATGCTCTGCAGATCATGGAGCGCTTAGTGCAATTTTCTCCTCATTGTCGGATTCCTTaGCTGAAGTCTCCAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KQKQHALQIMERLVQFSPHCRIP*LKSPGN Trigger: ATTACCTGGAGACTTCAGCCAAGGAATCCGACAATG...AGGAGAAAATTGCACTAAGCGCTCCATGATCTGCAGAGCATGTTGCTTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| 3UTR CAA 72 bp | TATGAAAGGCAAATCCATAGTCAGAAAGCAGATAGATaGTTCCCAGATACTGTGGAAGGAGAAGGTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YERQIHSQKADR*FPDTVEGEGLA Trigger: AGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACTATGGATTTGCCTTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| CDS-3UTR TCA 90 bp | CTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTTTTGGTTTACCTGGGATAGTAACTTTGAGTaGTGGAGCGAAATCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNKYYRDSTWPFQFWFTWDSNFE*WSEISL Trigger: AAGAGAGATTTCGCTCCATCACTCAAAGTTACTATC...CCAGGTAAACCAAAACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| 3UTR CAA 72 bp | TTGCACCTACAGTATTGTCAAGGATTGTTCTCAAACTaGAGATACATCGCTGAACAAATATCCCAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHLQYCQGLFSN*RYIAEQISQWP Trigger: AGGCCATTGGGATATTTGTTCAGCGATGTATCTCAAGTTTGAGAACAATCCTTGACAATACTGTAGGTGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CAA 72 bp | TCTTTTCTGAAAACAGCAACTTTGCTCATGCACTACTaGAGAAAGATTTGTGCATCTCGTTTCCACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: SFLKTATLLMHY*RKICASRFHTI Trigger: GATGGTGTGGAAACGAGATGCACAAATCTTTCTCAAGTAGTGCATGAGCAAAGTTGCTGTTTTCAGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CAA 72 bp | TTCTTCCCAACACAGCCTAATCTGTGTTTCTATGGCTaGGGTGTGATAGTCTTCATTCTATTTCTTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FFPTQPNLCFYG*GVIVFILFLST Trigger: AGTTGAAAGAAATAGAATGAAGACTATCACACCCAAGCCATAGAAACACAGATTAGGCTGTGTTGGGAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CAA 72 bp | TATAGATGGAGAAGAGTCACAGAACCAGAATTAGTCTaGCTGGGATATCCACTATACATTATTAGTAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YRWRRVTEPELV*LGYPLYIISKG Trigger: CCCTTTACTAATAATGTATAGTGGATATCCCAGCAAGACTAATTCTGGTTCTGTGACTCTTCTCCATCTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| 3UTR CAA 72 bp | GAAAACCTTAATAGAAGCCAGGCACAAGAGGCCACATaGTCTAATTATATTTATATGAAAGGCAAATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ENLNRSQAQEAT*SNYIYMKGKSI Trigger: TATGGATTTGCCTTTCATATAAATATAATTAGACAATGTGGCCTCTTGTGCCTGGCTTCTATTAAGGTTTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| CDS-3UTR CAA 90 bp | TCAAGGCCCTTGGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCAGAAGGAGCGAAATCTCTCTaGACCTGCGGTGTCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRPLACMLGKLWSLQESEGAKSL*TCGVPD Trigger: ATCTGGGACACCGCAGGTCAAGAGAGATTTCGCTCC...TTCTGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCTACAGGAGTCAGAAGGTCCAAGAGCGGGAGCCATAGTCATTGCCAGATTGGAGCGAAATCTCTCTaGACCTGCGGTGTCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EPTGVRRSKSGSHSHCQIGAKSL*TCGVPD Trigger: ATCTGGGACACCGCAGGTCAAGAGAGATTTCGCTCC...AATCTGGCAATGACTATGGCTCCCGCTCTTGGACCTTCTGACTCCTGTAGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCAGAAGGTCCAAGAGCGGCCAGGTCAATCTTGTaGCCTACTAACACAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ACMLGKLWSLQESEGPRAARSIL*PTNTVM Trigger: CATCACTGTGTTAGTAGGCAACAAGATTGACCTGGC...CGCTCTTGGACCTTCTGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCAAGGCCCTTGGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCATCAGCCAGGTCAATCTaGTTGCCTACTAACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QSRPLACMLGKLWSLQESSARSI*LPTNTV Trigger: CACTGTGTTAGTAGGCAACAAGATTGACCTGGCTGA...TGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTGGTAAGCTCTGGAGCCTACAGGAGTCAGAAGGTCCAAGAGCGGGAGCCATCAGCCAGGTCAATCTaGTTGCCTACTAACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLVSSGAYRSQKVQEREPSARSI*LPTNTV Trigger: CACTGTGTTAGTAGGCAACAAGATTGACCTGGCTGA...TGGCTCCCGCTCTTGGACCTTCTGACTCCTGTAGGCTCCAGAGCTTACCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGTCAAGGCCCTTGGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGAAGAGTTTCTCCACATaGTCGGATTCCTTGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQSRPLACMLGKLWSLQEKSFST*SDSLAE Trigger: TTCAGCCAAGGAATCCGACAATGTGGAGAAACTCTT...CTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCAAGGCCCTTGGCCTGCATGCTTGGTAAGCTCTGGAGCCTACAGGAGTCAGCTTCGATAGTAACTTaGAGTGATGGAGCGAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: QSRPLACMLGKLWSLQESASIVT*SDGAKS Trigger: AGATTTCGCTCCATCACTCAAAGTTACTATCGAAGC...TGACTCCTGTAGGCTCCAGAGCTTACCAAGCATGCAGGCCAAGGGCCTTGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCCATGGGGTCCTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTGGAGCGAAATCTCTCTaGACCTGCGGTGTCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ISMGSSISTTETVLGLSSGAKSL*TCGVPD Trigger: ATCTGGGACACCGCAGGTCAAGAGAGATTTCGCTCC...ACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAGGACCCCATGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS CCA 90 bp | GGCATGCTAAGTCAAGGAAGAGTTTCTCCACATTGTCGGATTCCTTaGCTGAAGTCTCCAGGTAATACATGTCCTGAGCCTCTGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: GMLSQGRVSPHCRIP*LKSPGNTCPEPLRT Trigger: AGTTCTCAGAGGCTCAGGACATGTATTACCTGGAGACTTCAGCCAAGGAATCCGACAATGTGGAGAAACTCTTCCTTGACTTAGCATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | AACGCCAGACTGCAAAAGGGTGAAACCATTATGTGTTCTGCTAATGCTGGCCTGGCCAGGTCAATCTTGTaGCCTACTAACACAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: NARLQKGETIMCSANAGLARSIL*PTNTVM Trigger: CATCACTGTGTTAGTAGGCAACAAGATTGACCTGGC...CAGGCCAGCATTAGCAGAACACATAATGGTTTCACCCTTTTGCAGTCTGGCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCCATGGGGTCCTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTTCAGCCAGGTCAATCTaGTTGCCTACTAACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISMGSSISTTETVLGLSSSARSI*LPTNTV Trigger: CACTGTGTTAGTAGGCAACAAGATTGACCTGGCTGA...ACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAGGACCCCATGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | AAACCCCCAACTAATTTTTCTATTGTAGGGCTGCACACAGCCAGCCTAGTGCCTAAGAGTTTCTCCACATaGTCGGATTCCTTGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KPPTNFSIVGLHTASLVPKSFST*SDSLAE Trigger: TTCAGCCAAGGAATCCGACAATGTGGAGAAACTCTT...AGGCACTAGGCTGGCTGTGTGCAGCCCTACAATAGAAAAATTAGTTGGGGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| CDS-3UTR CAA 90 bp | GCTCCAACGCCAGACTGCAAAAGGGTGAAACCATTATGTGTTCTGCTAATGCTGTTTCCCACTCCAGCGTaGCCAATTAAAACAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: APTPDCKRVKPLCVLLMLFPTPA*PIKTIL Trigger: CAAAATTGTTTTAATTGGCAACGCTGGAGTGGGAAA...CAGCATTAGCAGAACACATAATGGTTTCACCCTTTTGCAGTCTGGCGTTGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGCAACATGCTCTGCAGATCATGGAGCGCTTAGTGCAATTTTCTCCTTGAAGAGTTTCTCCACATaGTCGGATTCCTTGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TKATCSADHGALSAIFSLKSFST*SDSLAE Trigger: TTCAGCCAAGGAATCCGACAATGTGGAGAAACTCTT...CAAGGAGAAAATTGCACTAAGCGCTCCATGATCTGCAGAGCATGTTGCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGAAAGCAGATAGATTGTTCCCAGATACTGTGGAAGGAGAAGGTTTGGCTAAGGGTGACGATACATaGTTCACCAGTGTGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SQKADRLFPDTVEGEGLAKGDDT*FTSVFC Trigger: ACAGAACACACTGGTGAACAATGTATCGTCACCCTT...AGCCAAACCTTCTCCTTCCACAGTATCTGGGAACAATCTATCTGCTTTCTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGCAACATGCTCTGCAGATCATGGAGCGCTTAGTGCAATTTTCTCCTTGAAGGGTGACGATACATaGTTCACCAGTGTGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: TKATCSADHGALSAIFSLKGDDT*FTSVFC Trigger: ACAGAACACACTGGTGAACAATGTATCGTCACCCTT...CAAGGAGAAAATTGCACTAAGCGCTCCATGATCTGCAGAGCATGTTGCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| CDS-3UTR CAA 90 bp | TCCAGTTTTGGTTTACCTGGTAGTCAAGAAATCCATGGGCACCAGATTACCACTGCTTCGATAGTAACTTaGAGTGATGGAGCGAAATCT | + |
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Preference number: 5 (lower is better) Translates to: SSFGLPGSQEIHGHQITTASIVT*SDGAKS Trigger: AGATTTCGCTCCATCACTCAAAGTTACTATCGAAGC...AGTGGTAATCTGGTGCCCATGGATTTCTTGACTACCAGGTAAACCAAAACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| CDS-3UTR CAA 90 bp | CTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTTTTGGTTTACCTGGAAGGGTGACGATACATaGTTCACCAGTGTGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LNKYYRDSTWPFQFWFTWKGDDT*FTSVFC Trigger: ACAGAACACACTGGTGAACAATGTATCGTCACCCTT...CCAGGTAAACCAAAACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| CDS-3UTR CAA 90 bp | GGCGAGAAAGACTGGGCATTCTGGACTCTGTTAGAAATGCTAGAAATGTGTTATGCTTCGATAGTAACTTaGAGTGATGGAGCGAAATCT | + |
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Preference number: 5 (lower is better) Translates to: GEKDWAFWTLLEMLEMCYASIVT*SDGAKS Trigger: AGATTTCGCTCCATCACTCAAAGTTACTATCGAAGC...ATAACACATTTCTAGCATTTCTAACAGAGTCCAGAATGCCCAGTCTTTCTCGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032879.15 |
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| CDS-3UTR CAA 90 bp | CTCAATAAGTACTACAGAGACAGTACTTGGCCTTTCCAGTTTTGGTTTACCTGGTTTCCCACTCCAGCGTaGCCAATTAAAACAATTTTG | + |
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Preference number: 5 (lower is better) Translates to: LNKYYRDSTWPFQFWFTWFPTPA*PIKTIL Trigger: CAAAATTGTTTTAATTGGCAACGCTGGAGTGGGAAA...CCAGGTAAACCAAAACTGGAAAGGCCAAGTACTGTCTCTGTAGTACTTATTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| CDS TCA 72 bp | GGATCAAGGCATTGGCGCTTCGATAGTAACTTTGAGTaGTGGAGCGAAATCTCTCTTGACCTGCGGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: GSRHWRFDSNFE*WSEISLDLRCP Trigger: GGGACACCGCAGGTCAAGAGAGATTTCGCTCCATCACTCAAAGTTACTATCGAAGCGCCAATGCCTTGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 ENSMUST00000208945.2 |
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| CDS CAA 72 bp | ATGCTTTTCCCCTCTCCGGGTAAGGGTGACGATACATaGTTCACCAGTGTGTTCTGTCTTGCTTCGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: MLFPSPGKGDDT*FTSVFCLASLM Trigger: CATCAGCGAAGCAAGACAGAACACACTGGTGAACAATGTATCGTCACCCTTACCCGGAGAGGGGAAAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 |
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| CDS CAA 72 bp | GGTAAGGATCAAGGCATTGGCGCTTCGATAGTAACTTaGAGTGATGGAGCGAAATCTCTCTTGACCTGCGGT | + |
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Preference number: 6 (lower is better) Translates to: GKDQGIGASIVT*SDGAKSLLTCG Trigger: ACCGCAGGTCAAGAGAGATTTCGCTCCATCACTCAAAGTTACTATCGAAGCGCCAATGCCTTGATCCTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032879.15 ENSMUST00000107179.2 ENSMUST00000107180.8 ENSMUST00000208945.2 |
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