Pregenerated sensors for RAB2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022159Ensembl transcript IDs: ENSMUST00000022765.14, ENSMUST00000100631.11, ENSMUST00000167116.8, ENSMUST00000172488.8, ENSMUST00000172634.2, ENSMUST00000174020.8
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTACAGTAAGGGAACGGTGGGATGGACTGGGATGACAGGTGCCTaGTCTCAGAGAGCTTACAGCCTATGTGAGACAGATGCTTCCCCC | + |
|
Preference number: 1 (lower is better) Translates to: EYSKGTVGWTGMTGA*SQRAYSLCETDASP Trigger: GGGGGAAGCATCTGTCTCACATAGGCTGTAAGCTCTCTGAGAGCAGGCACCTGTCATCCCAGTCCATCCCACCGTTCCCTTACTGTACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR TCA 90 bp | GACTGGGATGACAGGTGCCTGCTCTCAGAGAGCTTACAGCCTATGTaGGACAGATGCTTCCCCCTCACCCACCCTGGGTTCACTACAAAA | + |
|
Preference number: 1 (lower is better) Translates to: DWDDRCLLSESLQPM*DRCFPLTHPGFTTK Trigger: TTTTGTAGTGAACCCAGGGTGGGTGAGGGGGAAGCATCTGTCTCACATAGGCTGTAAGCTCTCTGAGAGCAGGCACCTGTCATCCCAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR TCA 90 bp | ACAGTTACAGAGTCTACGGAACGGGTAAAAACGTCCCTATGTATCTaGGTCTTGGAAGCAGGCATTCTTACTGTAGACTGCACAGAATGG | + |
|
Preference number: 1 (lower is better) Translates to: TVTESTERVKTSLCI*VLEAGILTVDCTEW Trigger: CCATTCTGTGCAGTCTACAGTAAGAATGCCTGCTTCCAAGACTCAGATACATAGGGACGTTTTTACCCGTTCCGTAGACTCTGTAACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR TCA 90 bp | GAGACAGTGCAGAGGCACTCAGCTTCTATAGGAACTCTTATCATATaGCACACAGGTTTCCAAGGCAAGGAAATACACGCAATGAAATCA | + |
|
Preference number: 1 (lower is better) Translates to: ETVQRHSASIGTLII*HTGFQGKEIHAMKS Trigger: TGATTTCATTGCGTGTATTTCCTTGCCTTGGAAACCTGTGTGTCATATGATAAGAGTTCCTATAGAAGCTGAGTGCCTCTGCACTGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGAAGCAGGCATTCTTACTGTAGACTGCACAGAATGGAGGCAGTTACAGTGTGGCGCTGGCTGACCTaGAGCTGCTCCCCGAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LGSRHSYCRLHRMEAVTVWRWLT*SCSPRG Trigger: TCCTCTCGGGGAGCAGCTTCAGGTCAGCCAGCGCCA...CACTGTAACTGCCTCCATTCTGTGCAGTCTACAGTAAGAATGCCTGCTTCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR TCA 90 bp | GCAGAGTACAGTAAGGGAACGGTGGGATGGACTGGGATGACAGGTGCCTGCTCTAGCTTACAGCCTATGTaGGACAGATGCTTCCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: AEYSKGTVGWTGMTGACSSLQPM*DRCFPL Trigger: GAGGGGGAAGCATCTGTCTCACATAGGCTGTAAGCT...AGAGCAGGCACCTGTCATCCCAGTCCATCCCACCGTTCCCTTACTGTACTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR-3UTR TCA 90 bp | TATCTAACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTTGGCGCTGGCTGACCTaGAGCTGCTCCCCGAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: YLTELVRENKQPPGSLKPWRWLT*SCSPRG Trigger: TCCTCTCGGGGAGCAGCTTCAGGTCAGCCAGCGCCA...AGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGTTAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR TCA 90 bp | ATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATGGACTGGGAAGCCACCTGGGAGTCTaGAGCCTCAGGATCCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: IPDGELQSTVRERWDGLGSHLGV*SLRIPS Trigger: ACTTGGGATCCTGAGGCTTCAGACTCCCAGGTGGCT...TCCCAGTCCATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATGGACTGGGAAATCTCCAGGGCATGTaGACGGGCTCGCATGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: IPDGELQSTVRERWDGLGNLQGM*TGSHVC Trigger: GCACACATGCGAGCCCGTGCACATGCCCTGGAGATT...TCCCAGTCCATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCAGCAGCCAGAGTCAGGCCCTATGTCAGAAACGTTCTGCTGAGGGGAGCAGAGGTAATTGACTGCTaGGGCCCAATCTTGATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SAAARVRPYVRNVLLRGAEVIDC*GPILMP Trigger: TGGCATCAAGATTGGGCCCCAGCAGTCAATTACCTC...TGCTCCCCTCAGCAGAACGTTTCTGACATAGGGCCTGACTCTGGCTGCTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTCAGGATAATCTCCAGGGCATGTaGACGGGCTCGCATGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: TELVRENKQPPGSLKPQDNLQGM*TGSHVC Trigger: GCACACATGCGAGCCCGTGCACATGCCCTGGAGATT...ATCCTGAGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTCAGGATGTAAGAGAAGGCTCCTaGGGGCACAGCTCAGGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: TELVRENKQPPGSLKPQDVREGS*GHSSGS Trigger: TGAACCTGAGCTGTGCCCTCAGGAGCCTTCTCTTAC...ATCCTGAGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGTCTTGGAAGCAGGCATTCTTACTGTAGACTGCACAGAATGGAGGCAGTTAGCTTACAGCCTATGTaGGACAGATGCTTCCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LSLGSRHSYCRLHRMEAVSLQPM*DRCFPL Trigger: GAGGGGGAAGCATCTGTCTCACATAGGCTGTAAGCT...AACTGCCTCCATTCTGTGCAGTCTACAGTAAGAATGCCTGCTTCCAAGACTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCAGCAGCCAGAGTCAGGCCCTATGTCAGAAACGTTCTGCTGAGGGGAGCACCATTTGCCTCATTGTaGACATCAAATAAACCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SAAARVRPYVRNVLLRGAPFASL*TSNKPC Trigger: GCAAGGTTTATTTGATGTCCACAATGAGGCAAATGG...TGCTCCCCTCAGCAGAACGTTTCTGACATAGGGCCTGACTCTGGCTGCTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGATGCCAGGAGTCAGCAGAGGCAAACTGGGCTGACAGTTACAGAGTCTACGTTTTGCCAAAAGTCCTaGGTGCTGAAATTATGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: GDARSQQRQTGLTVTESTFCQKS*VLKLWV Trigger: TACCCATAATTTCAGCACTCAGGACTTTTGGCAAAA...CGTAGACTCTGTAACTGTCAGCCCAGTTTGCCTCTGCTGACTCCTGGCATCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTCAGGATACACTGAAAAGAGGCTaGTCTCAGCCTAAGCAACGA | + |
|
Preference number: 2 (lower is better) Translates to: TELVRENKQPPGSLKPQDTLKRG*SQPKQR Trigger: TCGTTGCTTAGGCTGAGAGCAGCCTCTTTTCAGTGT...ATCCTGAGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR CCA 90 bp | GGAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTAACGGTGGGATGGACTaGGATGACAGGTGCCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GDGETRIQLHRDDSKAFCNGGMD*DDRCLL Trigger: GAGCAGGCACCTGTCATCCCAGTCCATCCCACCGTT...ACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTAAGGGAACGGTGGGATaGACTGGGATGACAGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: GDGETRIQLHRDDSKAFCKGTVG*TGMTGA Trigger: GGCACCTGTCATCCCAGTCCATCCCACCGTTCCCTT...ACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTACGGGCTCGCATGTGTaGCTGTGTGTGTGTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GDGETRIQLHRDDSKAFCTGSHV*LCVCVC Trigger: ACACACACACACACACAGGCACACATGCGAGCCCGT...ACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCTTCAACGGTGGGATGGACTaGGATGACAGGTGCCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GETRIQLHRDDSKAFCFFNGGMD*DDRCLL Trigger: GAGCAGGCACCTGTCATCCCAGTCCATCCCACCGTT...GAAGAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTATATATTTCTTTGGCTGTATTAATGTAGGCCTCTTCAACATTGCAGGCTGTTTGGAGCTGGAGTGCTaGCGGGCGTCCTCTAACCAT | + |
|
Preference number: 2 (lower is better) Translates to: PIYFFGCINVGLFNIAGCLELEC*RASSNH Trigger: ATGGTTAGAGGACGCCCGCCAGCACTCCAGCTCCAA...ACAGCCTGCAATGTTGAAGAGGCCTACATTAATACAGCCAAAGAAATATATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174020.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGTCTTGGAAGCAGGCATTCTTACTGTAGACTGCACAGAATGGAGGCAGTTAGGACAGAAGAGCAATaGGAAATCAGGATAAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSLGSRHSYCRLHRMEAVRTEEQ*EIRIRR Trigger: TCTCCTTATCCTGATTTCTCATTGCTCTTCTGTCCT...AACTGCCTCCATTCTGTGCAGTCTACAGTAAGAATGCCTGCTTCCAAGACTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGACAGATGCTTCCCCCTCACCCACCCTGGGTTCACTACAAAACATTTATACTAGCAAATAGATGTTaGCAGCAAGTTGTTTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: VRQMLPPHPPWVHYKTFILANRC*QQVVCL Trigger: AAGGCAAACAACTTGCTGTCAACATCTATTTGCTAG...TATAAATGTTTTGTAGTGAACCCAGGGTGGGTGAGGGGGAAGCATCTGTCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR TCA 90 bp | TATCTAACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTAAAAGTCCTGAGTGCTaGAATTATGGGTATGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YLTELVRENKQPPGSLKPKSPEC*NYGYVP Trigger: TGGCACATACCCATAATTTCAGCACTCAGGACTTTT...AGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGTTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR TCA 90 bp | GGAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTGGGGATCCTAAGGAATaGTGCTCAAGGTTGTACACA | + |
|
Preference number: 2 (lower is better) Translates to: GDGETRIQLHRDDSKAFCGDPKE*CSRLYT Trigger: TGTGTACAACCTTGAGCATCATTCCTTAGGATCCCC...ACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR TCA 90 bp | GGAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTCTAGCAAATAGATGTTaGCAGCAAGTTGTTTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: GDGETRIQLHRDDSKAFCLANRC*QQVVCL Trigger: AAGGCAAACAACTTGCTGTCAACATCTATTTGCTAG...ACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR CCA 90 bp | CATTTGCCTCATTGTGGACATCAAATAAACCTTGCTGGATCTTCCTATATATTTAACCATGAGGTCAGGTaGTTGAAGGTTTCGCGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HLPHCGHQINLAGSSYIFNHEVR*LKVSRL Trigger: GAGACGCGAAACCTTCAACCACCTGACCTCATGGTT...AAATATATAGGAAGATCCAGCAAGGTTTATTTGATGTCCACAATGAGGCAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174020.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTCTTATCATATGACACACAGGTTTCCAAGGCAAGGAAATACACGCAATGAATCCTCATGTTTTAAGTaGAAGGGTGAAACATCGCAC | + |
|
Preference number: 2 (lower is better) Translates to: NSYHMTHRFPRQGNTRNESSCFK*KGETSH Trigger: GTGCGATGTTTCACCCTTCCACTTAAAACATGAGGA...TTCATTGCGTGTATTTCCTTGCCTTGGAAACCTGTGTGTCATATGATAAGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCTTCTTCCTCATGTTTTAAGTaGAAGGGTGAAACATCGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GKPGYNYIEMTLRPFVSSSSCFK*KGETSH Trigger: GTGCGATGTTTCACCCTTCCACTTAAAACATGAGGA...AGAAGAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR TCA 72 bp | GACAGGTGCCTGCTCTCAGAGAGCTTACAGCCTATGTaGGACAGATGCTTCCCCCTCACCCACCCTGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: DRCLLSESLQPM*DRCFPLTHPGF Trigger: GAACCCAGGGTGGGTGAGGGGGAAGCATCTGTCTCACATAGGCTGTAAGCTCTCTGAGAGCAGGCACCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR TCA 72 bp | CAGAGTACAGTAAGGGAACGGTGGGATGGACTGGGATaGCAGGTGCCTGCTCTCAGAGAGCTTACAGCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: QSTVRERWDGLG*QVPALRELTAY Trigger: ATAGGCTGTAAGCTCTCTGAGAGCAGGCACCTGTCATCCCAGTCCATCCCACCGTTCCCTTACTGTACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGAGTACAGTAAGGGAACGGTGGGATGGACTGGGATGACAGGTGCCTGCTCTTTGACAGCAAGTTGTTaGCCTTTTAGCTACTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: AEYSKGTVGWTGMTGACSLTASC*PFSYCD Trigger: GTCACAGTAGCTAAAAGGCAAACAACTTGCTGTCAA...AGAGCAGGCACCTGTCATCCCAGTCCATCCCACCGTTCCCTTACTGTACTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR TCA 72 bp | AGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTaGAGCCTCAGGATCCCAAGTTCAAAGCCAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SWLERINSHLGV*SLRIPSSKPAS Trigger: TGAGGCTGGCTTTGAACTTGGGATCCTGAGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCACTTAATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATCTCCTGGCAATCCTTTaGCCAAAAGTCCTGAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CHLIPDGELQSTVRERWDLLAIL*PKVLSA Trigger: AGCACTCAGGACTTTTGGCAAAAGGATTGCCAGGAG...ATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAATTAAGTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCATGTCACTTAATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGCTCCTGGCAATCCTTTaGCCAAAAGTCCTGAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KACHLIPDGELQSTVRERLLAIL*PKVLSA Trigger: AGCACTCAGGACTTTTGGCAAAAGGATTGCCAGGAG...CCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAATTAAGTGACATGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR TCA 72 bp | GAGTCTACGGAACGGGTAAAAACGTCCCTATGTATCTaGGTCTTGGAAGCAGGCATTCTTACTGTAGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: ESTERVKTSLCI*VLEAGILTVDC Trigger: GCAGTCTACAGTAAGAATGCCTGCTTCCAAGACTCAGATACATAGGGACGTTTTTACCCGTTCCGTAGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCTAACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTTTGACAGCAAGTTGTTaGCCTTTTAGCTACTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: YLTELVRENKQPPGSLKPLTASC*PFSYCD Trigger: GTCACAGTAGCTAAAAGGCAAACAACTTGCTGTCAA...AGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGTTAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| 3UTR-3UTR CAA 90 bp | TTGATGCCATTTGCCTCATTGTGGACATCAAATAAACCTTGCTGGATCTTCCTAACATTGCAGGCTGTCTaGGCTGATGTTTCCATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LMPFASLWTSNKPCWIFLTLQAV*ADVSMN Trigger: ATTCATGGAAACATCAGCCAAGACAGCCTGCAATGT...TAGGAAGATCCAGCAAGGTTTATTTGATGTCCACAATGAGGCAAATGGCATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| 3UTR TCA 72 bp | ATCAACTTTGATTCTAACATTTTAGAAACTAGAGGGTaGAAGAGCCATAATCTACGCGGAATGCTCATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: INFDSNILETRG*KSHNLRGMLMS Trigger: GGACATGAGCATTCCGCGTAGATTATGGCTCTTTCACCCTCTAGTTTCTAAAATGTTAGAATCAAAGTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| CDS-3UTR GCA 90 bp | ACAGCCACCTGGGAGTCTGAAGCCTCAGGATCCCAAGTTCAAAGCCAGCCTCAGCAGCAGGGCTCCAGCTaGTCCCCTGTAGTAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: TATWESEASGSQVQSQPQQQGSS*SPVVGT Trigger: CGTTCCTACTACAGGGGAGCAGCTGGAGCCCTGCTG...CTGAGGCTGGCTTTGAACTTGGGATCCTGAGGCTTCAGACTCCCAGGTGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGCCAGAGTCAGGCCCTATGTCAGAAACGTTCTGCTGAGGGGAGCACGCTGAAGGAGGAGACATaGCTTCCCCACACCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSQSQALCQKRSAEGSTLKEET*LPHTCV Trigger: GACACAGGTGTGGGGAAGTCATGTCTCCTCCTTCAG...CGTGCTCCCCTCAGCAGAACGTTTCTGACATAGGGCCTGACTCTGGCTGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGTACAGTAAGGGAACGGTGGGATGGACTGGGATGACAGGTGCCTGCTCTCTGAAGGAGGAGACATaGCTTCCCCACACCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AEYSKGTVGWTGMTGACSLKEET*LPHTCV Trigger: GACACAGGTGTGGGGAAGTCATGTCTCCTCCTTCAG...AGAGCAGGCACCTGTCATCCCAGTCCATCCCACCGTTCCCTTACTGTACTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGAGTCAGCAGAGGCAAACTGGGCTGACAGTTACAGAGTCTACGGAACGTTGGAGCTGGAGTGCTaGCGGGCGTCCTCTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CQESAEANWADSYRVYGTLELEC*RASSNH Trigger: ATGGTTAGAGGACGCCCGCCAGCACTCCAGCTCCAA...CGTTCCGTAGACTCTGTAACTGTCAGCCCAGTTTGCCTCTGCTGACTCCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | GAATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCACATCCCTATTGTGAGGTCGTaGACGGGCTGGAACCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EYKAVLTSKGLSFLSLHIPIVRS*TGWNRL Trigger: CAAGCGGTTCCAGCCCGTGCACGACCTCACAATAGG...GATGTGAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR GCA 90 bp | GGGAACGGTGGGATGGACTGGGATGACAGGTGCCTGCTCTCAGAGAGCTTACAGATGAATATAAGGCCGTaGTCACGAGCAAAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GNGGMDWDDRCLLSESLQMNIRP*SRAKAS Trigger: AGAGGCCTTTGCTCGTGAGCACGGCCTTATATTCAT...CTGTAAGCTCTCTGAGAGCAGGCACCTGTCATCCCAGTCCATCCCACCGTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CCA 90 bp | ATCTCCTTCGTGGCGCTGGCTGACCTGAAGCTGCTCCCCGAGAGGAAAGAGAAAGAGGTAATTGACTGCTaGGGCCCAATCTTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISFVALADLKLLPERKEKEVIDC*GPILMP Trigger: TGGCATCAAGATTGGGCCCCAGCAGTCAATTACCTC...TTTCTCTTTCCTCTCGGGGAGCAGCTTCAGGTCAGCCAGCGCCACGAAGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| CDS-3UTR TCA 90 bp | GGTGATGCCAGGAGTCAGCAGAGGCAAACTGGGCTGACAGTTACAGAGTCTACGCGCTTGTCGGTAAACTaGAGGAGGAGACATGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDARSQQRQTGLTVTESTRLSVN*RRRHDF Trigger: GAAGTCATGTCTCCTCCTTCAGTTTACCGACAAGCG...CGTAGACTCTGTAACTGTCAGCCCAGTTTGCCTCTGCTGACTCCTGGCATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTTAAGTGGAAGGGTGAAACATCGCACACTGAAAAGAGGCTGCTCTCAGCCCAGCAGGGCTCCAGCTaGTCCCCTGTAGTAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: CFKWKGETSHTEKRLLSAQQGSS*SPVVGT Trigger: CGTTCCTACTACAGGGGAGCAGCTGGAGCCCTGCTG...GGCTGAGAGCAGCCTCTTTTCAGTGTGCGATGTTTCACCCTTCCACTTAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| CDS-3UTR CCA 90 bp | CTAACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTCAGTTGGAGCTGGAGTGCTaGCGGGCGTCCTCTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTELVRENKQPPGSLKPQLELEC*RASSNH Trigger: ATGGTTAGAGGACGCCCGCCAGCACTCCAGCTCCAA...CTGAGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGAGTCAGCAGAGGCAAACTGGGCTGACAGTTACAGAGTCTACGGAACGGAGGTAATTGACTGCTaGGGCCCAATCTTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQESAEANWADSYRVYGTEVIDC*GPILMP Trigger: TGGCATCAAGATTGGGCCCCAGCAGTCAATTACCTC...CGTTCCGTAGACTCTGTAACTGTCAGCCCAGTTTGCCTCTGCTGACTCCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTCAGGATCTGAAGGAGGAGACATaGCTTCCCCACACCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TELVRENKQPPGSLKPQDLKEET*LPHTCV Trigger: GACACAGGTGTGGGGAAGTCATGTCTCCTCCTTCAG...ATCCTGAGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | AATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCACATCCATGAGGTCAGGTGGTTaGAGGTTTCGCGTCGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: NIRPCSRAKASPSSLFTSMRSGG*RFRVVS Trigger: GGATACGACGCGAAACCTTCAACCACCTGACCTCAT...GGATGTGAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172634.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGAAGCAGGCATTCTTACTGTAGACTGCACAGAATGGAGGCAGTTACAGTGCCTATTGTGAGGTCGTaGACGGGCTGGAACCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSRHSYCRLHRMEAVTVPIVRS*TGWNRL Trigger: CAAGCGGTTCCAGCCCGTGCACGACCTCACAATAGG...CACTGTAACTGCCTCCATTCTGTGCAGTCTACAGTAAGAATGCCTGCTTCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGACAGATGCTTCCCCCTCACCCACCCTGGGTTCACTACAAAACATTTATACTGAAGGAGGAGACATaGCTTCCCCACACCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRQMLPPHPPWVHYKTFILKEET*LPHTCV Trigger: GACACAGGTGTGGGGAAGTCATGTCTCCTCCTTCAG...TATAAATGTTTTGTAGTGAACCCAGGGTGGGTGAGGGGGAAGCATCTGTCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGAATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCCGCTTGTCGGTAAACTaGAGGAGGAGACATGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SMNIRPCSRAKASPSSLFRLSVN*RRRHDF Trigger: GAAGTCATGTCTCCTCCTTCAGTTTACCGACAAGCG...GAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATTCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGTCAGTGAGGGTTTCCTAAAGGAAAAGAGTGTCAGTATGATGGTAGTGCAGCAGGGCTCCAGCTaGTCCCCTGTAGTAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: RSVSEGFLKEKSVSMMVVQQGSS*SPVVGT Trigger: CGTTCCTACTACAGGGGAGCAGCTGGAGCCCTGCTG...CACTACCATCATACTGACACTCTTTTCCTTTAGGAAACCCTCACTGACTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | ACGGTGGGATGGACTGGGATGACAGGTGCCTGCTCTCAGAGAGCTTACAGCCTAAATCTTGATGCCATTTaGCTCTTCAACATTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVGWTGMTGACSQRAYSLNLDAI*LFNIAG Trigger: GCCTGCAATGTTGAAGAGGCAAATGGCATCAAGATT...TAGGCTGTAAGCTCTCTGAGAGCAGGCACCTGTCATCCCAGTCCATCCCACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100631.11 |
||
| CDS-3UTR CCA 90 bp | GGGAACGGTGGGATGGACTGGGATGACAGGTGCCTGCTCTCAGAGAGCTTACAGCCATTTGCCTCATTGTaGACATCAAATAAACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GNGGMDWDDRCLLSESLQPFASL*TSNKPC Trigger: GCAAGGTTTATTTGATGTCCACAATGAGGCAAATGG...CTGTAAGCTCTCTGAGAGCAGGCACCTGTCATCCCAGTCCATCCCACCGTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000167116.8 |
||
| CDS-3UTR CCA 90 bp | AATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCACATCCAACCATGAGGTCAGGTaGTTGAAGGTTTCGCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NIRPCSRAKASPSSLFTSNHEVR*LKVSRR Trigger: ACGACGCGAAACCTTCAACCACCTGACCTCATGGTT...GGATGTGAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172634.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTCAGTGAGGGTTTCCTAAAGGAAAAGAGTGTCAGTATGATGGTAGTGGAGCCTATTGTGAGGTCGTaGACGGGCTGGAACCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSEGFLKEKSVSMMVVEPIVRS*TGWNRL Trigger: CAAGCGGTTCCAGCCCGTGCACGACCTCACAATAGG...CTCCACTACCATCATACTGACACTCTTTTCCTTTAGGAAACCCTCACTGACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATGGACTGGGAATGAATATAAGGCCGTaGTCACGAGCAAAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPDGELQSTVRERWDGLGMNIRP*SRAKAS Trigger: AGAGGCCTTTGCTCGTGAGCACGGCCTTATATTCAT...TCCCAGTCCATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CCA 90 bp | ACGGTGGGATGGACTGGGATGACAGGTGCCTGCTCTCAGAGAGCTTACAGCCTACCATTTGCCTCATTGTaGACATCAAATAAACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVGWTGMTGACSQRAYSLPFASL*TSNKPC Trigger: GCAAGGTTTATTTGATGTCCACAATGAGGCAAATGG...TAGGCTGTAAGCTCTCTGAGAGCAGGCACCTGTCATCCCAGTCCATCCCACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTCTTGGAAGCAGGCATTCTTACTGTAGACTGCACAGAATGGAGGCAGTTCGCTTGTCGGTAAACTaGAGGAGGAGACATGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLGSRHSYCRLHRMEAVRLSVN*RRRHDF Trigger: GAAGTCATGTCTCCTCCTTCAGTTTACCGACAAGCG...AACTGCCTCCATTCTGTGCAGTCTACAGTAAGAATGCCTGCTTCCAAGACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATGGACTGGGAGTTTTCCATCGATGTTaGCCATACGTGCTCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IPDGELQSTVRERWDGLGVFHRC*PYVLQT Trigger: AGTTTGGAGCACGTATGGTCAACATCGATGGAAAAC...TCCCAGTCCATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | AATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCACATCCGTTTTCCATCGATGTTaGCCATACGTGCTCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: NIRPCSRAKASPSSLFTSVFHRC*PYVLQT Trigger: AGTTTGGAGCACGTATGGTCAACATCGATGGAAAAC...GGATGTGAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGAATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCGATGTTGACCATACGTaGTCCAAACTCCACACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SMNIRPCSRAKASPSSLFDVDHT*SKLHTY Trigger: ATAGGTGTGGAGTTTGGAGCACGTATGGTCAACATC...GAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATTCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCCACCTGGGAGTCTGAAGCCTCAGGATCCCAAGTTCAAAGCCAGCCTCAGAATCTTGATGCCATTTaGCTCATTGTGGACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TATWESEASGSQVQSQPQNLDAI*LIVDIK Trigger: TTTGATGTCCACAATGAGGCAAATGGCATCAAGATT...CTGAGGCTGGCTTTGAACTTGGGATCCTGAGGCTTCAGACTCCCAGGTGGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTTAAGTGGAAGGGTGAAACATCGCACACTGAAAAGAGGCTGCTCTCAGCCGAGGAGGTAATTGACTaGTGGGGCCCAATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CFKWKGETSHTEKRLLSAEEVID*WGPILM Trigger: CATCAAGATTGGGCCCCAGCAGTCAATTACCTCCTC...GGCTGAGAGCAGCCTCTTTTCAGTGTGCGATGTTTCACCCTTCCACTTAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| CDS-3UTR GCA 90 bp | GATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCCCTATTGTGAGGTCGTaGACGGGCTGGAACCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DGETRIQLHRDDSKAFCFPIVRS*TGWNRL Trigger: CAAGCGGTTCCAGCCCGTGCACGACCTCACAATAGG...GAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CCA 90 bp | TATCTAACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTAACCATGAGGTCAGGTaGTTGAAGGTTTCGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLTELVRENKQPPGSLKPNHEVR*LKVSRL Trigger: GAGACGCGAAACCTTCAACCACCTGACCTCATGGTT...AGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGTTAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTCTTGGAAGCAGGCATTCTTACTGTAGACTGCACAGAATGGAGGCAGTTGTTTTCCATCGATGTTaGCCATACGTGCTCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSLGSRHSYCRLHRMEAVVFHRC*PYVLQT Trigger: AGTTTGGAGCACGTATGGTCAACATCGATGGAAAAC...AACTGCCTCCATTCTGTGCAGTCTACAGTAAGAATGCCTGCTTCCAAGACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTCTTGGAAGCAGGCATTCTTACTGTAGACTGCACAGAATGGAGGCAGTTGCAGGCTGTCTTGGCTaGTGTTTCCATGAATATAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLGSRHSYCRLHRMEAVAGCLG*CFHEYK Trigger: CTTATATTCATGGAAACATCAGCCAAGACAGCCTGC...AACTGCCTCCATTCTGTGCAGTCTACAGTAAGAATGCCTGCTTCCAAGACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | CCTATATATTTCTTTGGCTGTATTAATGTAGGCCTCTTCAACATTGCAGGCTGTCCTATTGTGAGGTCGTaGACGGGCTGGAACCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PIYFFGCINVGLFNIAGCPIVRS*TGWNRL Trigger: CAAGCGGTTCCAGCCCGTGCACGACCTCACAATAGG...ACAGCCTGCAATGTTGAAGAGGCCTACATTAATACAGCCAAAGAAATATATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGACAGATGCTTCCCCCTCACCCACCCTGGGTTCACTACAAAACATTTATAGATGTTGACCATACGTaGTCCAAACTCCACACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VRQMLPPHPPWVHYKTFIDVDHT*SKLHTY Trigger: ATAGGTGTGGAGTTTGGAGCACGTATGGTCAACATC...TATAAATGTTTTGTAGTGAACCCAGGGTGGGTGAGGGGGAAGCATCTGTCTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCATGTCACTTAATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGAGGCCTCTTCAACATTaGAGGCTGTCTTGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KACHLIPDGELQSTVRERRPLQH*RLSWLM Trigger: CATCAGCCAAGACAGCCTGCAATGTTGAAGAGGCCT...CCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAATTAAGTGACATGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGTCAGTGAGGGTTTCCTAAAGGAAAAGAGTGTCAGTATGATGGTAGTGAGGCCTCTTCAACATTaGAGGCTGTCTTGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSVSEGFLKEKSVSMMVVRPLQH*RLSWLM Trigger: CATCAGCCAAGACAGCCTGCAATGTTGAAGAGGCCT...CACTACCATCATACTGACACTCTTTTCCTTTAGGAAACCCTCACTGACTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGTCAGTGAGGGTTTCCTAAAGGAAAAGAGTGTCAGTATGATGGTAGTGGAGGAGGTAATTGACTaGTGGGGCCCAATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSVSEGFLKEKSVSMMVVEEVID*WGPILM Trigger: CATCAAGATTGGGCCCCAGCAGTCAATTACCTCCTC...CACTACCATCATACTGACACTCTTTTCCTTTAGGAAACCCTCACTGACTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGTCAGTGAGGGTTTCCTAAAGGAAAAGAGTGTCAGTATGATGGTAGTGAACCATGAGGTCAGGTaGTTGAAGGTTTCGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSVSEGFLKEKSVSMMVVNHEVR*LKVSRL Trigger: GAGACGCGAAACCTTCAACCACCTGACCTCATGGTT...CACTACCATCATACTGACACTCTTTTCCTTTAGGAAACCCTCACTGACTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCTTCTTTGGAGCTGGAGTGCTaGCGGGCGTCCTCTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKPGYNYIEMTLRPFVSSLELEC*RASSNH Trigger: ATGGTTAGAGGACGCCCGCCAGCACTCCAGCTCCAA...AGAAGAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCATTTGCCTCATTGTGGACATCAAATAAACCTTGCTGGATCTTCCTATATCTGAAGGAGGAGACATaGCTTCCCCACACCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MPFASLWTSNKPCWIFLYLKEET*LPHTCV Trigger: GACACAGGTGTGGGGAAGTCATGTCTCCTCCTTCAG...ATATAGGAAGATCCAGCAAGGTTTATTTGATGTCCACAATGAGGCAAATGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR CCA 90 bp | GGAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTGAGGTAATTGACTGCTaGGGCCCAATCTTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDGETRIQLHRDDSKAFCEVIDC*GPILMP Trigger: TGGCATCAAGATTGGGCCCCAGCAGTCAATTACCTC...ACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCATGTCACTTAATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGGCAGGCTGTCTTGGCTaGTGTTTCCATGAATATAAG | + |
|
Preference number: 4 (lower is better) Translates to: KACHLIPDGELQSTVRERAGCLG*CFHEYK Trigger: CTTATATTCATGGAAACATCAGCCAAGACAGCCTGC...CCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAATTAAGTGACATGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCATTTGCCTCATTGTGGACATCAAATAAACCTTGCTGGATCTTCCTATATCGCTTGTCGGTAAACTaGAGGAGGAGACATGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: MPFASLWTSNKPCWIFLYRLSVN*RRRHDF Trigger: GAAGTCATGTCTCCTCCTTCAGTTTACCGACAAGCG...ATATAGGAAGATCCAGCAAGGTTTATTTGATGTCCACAATGAGGCAAATGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR GCA 90 bp | GGAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTGATGTTGACCATACGTaGTCCAAACTCCACACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GDGETRIQLHRDDSKAFCDVDHT*SKLHTY Trigger: ATAGGTGTGGAGTTTGGAGCACGTATGGTCAACATC...ACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGAAGCAGGCATTCTTACTGTAGACTGCACAGAATGGAGGCAGTTACAGTGAATCTTGATGCCATTTaGCTCATTGTGGACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGSRHSYCRLHRMEAVTVNLDAI*LIVDIK Trigger: TTTGATGTCCACAATGAGGCAAATGGCATCAAGATT...CACTGTAACTGCCTCCATTCTGTGCAGTCTACAGTAAGAATGCCTGCTTCCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | GATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCGCAGGCTGTCTTGGCTaGTGTTTCCATGAATATAAG | + |
|
Preference number: 4 (lower is better) Translates to: DGETRIQLHRDDSKAFCFAGCLG*CFHEYK Trigger: CTTATATTCATGGAAACATCAGCCAAGACAGCCTGC...GAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCTTCTATGAATATAAGGCCGTaGTCACGAGCAAAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKPGYNYIEMTLRPFVSSMNIRP*SRAKAS Trigger: AGAGGCCTTTGCTCGTGAGCACGGCCTTATATTCAT...AGAAGAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | AATGATGCTCAAGGTTGTACACACATAATAAATAAAAAGGAGCTGGCAACGAGAGAGGAGGTAATTGACTaGTGGGGCCCAATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NDAQGCTHIINKKELATREEVID*WGPILM Trigger: CATCAAGATTGGGCCCCAGCAGTCAATTACCTCCTC...TCTCGTTGCCAGCTCCTTTTTATTTATTATGTGTGTACAACCTTGAGCATCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| CDS-3UTR GCA 90 bp | GGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCTTCTTTGCCTCTTCAACATTaGAGGCTGTCTTGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GKPGYNYIEMTLRPFVSSLPLQH*RLSWLM Trigger: CATCAGCCAAGACAGCCTGCAATGTTGAAGAGGCAA...AGAAGAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100631.11 |
||
| CDS-3UTR TCA 90 bp | GGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCTTCTGTTTTCCATCGATGTTaGCCATACGTGCTCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GKPGYNYIEMTLRPFVSSVFHRC*PYVLQT Trigger: AGTTTGGAGCACGTATGGTCAACATCGATGGAAAAC...AGAAGAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCTTCTGATGTTGACCATACGTaGTCCAAACTCCACACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GKPGYNYIEMTLRPFVSSDVDHT*SKLHTY Trigger: ATAGGTGTGGAGTTTGGAGCACGTATGGTCAACATC...AGAAGAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR TCA 90 bp | CATTTGCCTCATTGTGGACATCAAATAAACCTTGCTGGATCTTCCTATATATTTGTTTTCCATCGATGTTaGCCATACGTGCTCCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: HLPHCGHQINLAGSSYIFVFHRC*PYVLQT Trigger: AGTTTGGAGCACGTATGGTCAACATCGATGGAAAAC...AAATATATAGGAAGATCCAGCAAGGTTTATTTGATGTCCACAATGAGGCAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS TCA 90 bp | CCTATTGTGAGGTCGTGCACGGGCTGGAACCGCTTGTCGGTAAACTaGAGGAGGAGACATGACTTCCCCACACCTGTGTCTCCGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PIVRSCTGWNRLSVN*RRRHDFPTPVSPMM Trigger: CATCATCGGAGACACAGGTGTGGGGAAGTCATGTCTCCTCCTTCAGTTTACCGACAAGCGGTTCCAGCCCGTGCACGACCTCACAATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATGGACTGGGAAGAACGGAAGGACTCTaGCCCAGCCGTATCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: IPDGELQSTVRERWDGLGRTEGL*PSRIPD Trigger: ATCTGGGATACGGCTGGGCAAGAGTCCTTCCGTTCT...TCCCAGTCCATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | GAATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCACATCCATGAGGTCAGGTGGTaGAAGGTTTCGCGTCGTATC | + |
|
Preference number: 5 (lower is better) Translates to: EYKAVLTSKGLSFLSLHIHEVRW*KVSRRI Trigger: GATACGACGCGAAACCTTCAACCACCTGACCTCATG...GATGTGAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172634.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGAGTCAGCAGAGGCAAACTGGGCTGACAGTTACAGAGTCTACGGAACGTGTTTTCCATCGATGTaGACCATACGTGCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CQESAEANWADSYRVYGTCFPSM*TIRAPN Trigger: GTTTGGAGCACGTATGGTCAACATCGATGGAAAACA...CGTTCCGTAGACTCTGTAACTGTCAGCCCAGTTTGCCTCTGCTGACTCCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | CTAACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTCAGTGCTGGGGCCCAATCTaGATGCCATTTGCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LTELVRENKQPPGSLKPQCWGPI*MPFASL Trigger: CAATGAGGCAAATGGCATCAAGATTGGGCCCCAGCA...CTGAGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAGCCAGAGTCAGGCCCTATGTCAGAAACGTTCTGCTGAGGGGAGCACGTCACGTATCCCAGATTaGCAGTTTGATTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSQSQALCQKRSAEGSTSRIPD*QFDLFS Trigger: GGAAAACAAATCAAACTGCAAATCTGGGATACGTGA...CGTGCTCCCCTCAGCAGAACGTTTCTGACATAGGGCCTGACTCTGGCTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172488.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCAGCAGCCAGAGTCAGGCCCTATGTCAGAAACGTTCTGCTGAGGGGAGCATCCCAGATTTGCAGTTaGATTTGTTTTCCATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SAAARVRPYVRNVLLRGASQICS*ICFPSM Trigger: CATCGATGGAAAACAAATCAAACTGCAAATCTGGGA...TGCTCCCCTCAGCAGAACGTTTCTGACATAGGGCCTGACTCTGGCTGCTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATGCCAGGAGTCAGCAGAGGCAAACTGGGCTGACAGTTACAGAGTCTACGAGCCGTATCCCAGATTaGCAGTTTGATTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GDARSQQRQTGLTVTESTSRIPD*QFDLFS Trigger: GGAAAACAAATCAAACTGCAAATCTGGGATACGGCT...CGTAGACTCTGTAACTGTCAGCCCAGTTTGCCTCTGCTGACTCCTGGCATCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | TGTCACTTAATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATAGAACGGAAGGACTCTaGCCCAGCCGTATCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CHLIPDGELQSTVRERWDRTEGL*PSRIPD Trigger: ATCTGGGATACGGCTGGGCAAGAGTCCTTCCGTTCT...ATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAATTAAGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATGGACTGGGATTTGCCTCTTCAACATaGCAGGCTGTCTTGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IPDGELQSTVRERWDGLGFASST*QAVLAD Trigger: ATCAGCCAAGACAGCCTGCAATGTTGAAGAGGCAAA...TCCCAGTCCATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100631.11 |
||
| CDS-3UTR CAA 90 bp | AATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCACATCCTGTTTTCCATCGATGTaGACCATACGTGCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NIRPCSRAKASPSSLFTSCFPSM*TIRAPN Trigger: GTTTGGAGCACGTATGGTCAACATCGATGGAAAACA...GGATGTGAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTCAGTGAGGGTTTCCTAAAGGAAAAGAGTGTCAGTATGATGGTAGTGGAGCATGAGGTCAGGTGGTaGAAGGTTTCGCGTCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSEGFLKEKSVSMMVVEHEVRW*KVSRLV Trigger: CACGAGACGCGAAACCTTCAACCACCTGACCTCATG...CTCCACTACCATCATACTGACACTCTTTTCCTTTAGGAAACCCTCACTGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCATGTCACTTAATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGCATGAGGTCAGGTGGTaGAAGGTTTCGCGTCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: KACHLIPDGELQSTVRERHEVRW*KVSRLV Trigger: CACGAGACGCGAAACCTTCAACCACCTGACCTCATG...CCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAATTAAGTGACATGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATGCCAGGAGTCAGCAGAGGCAAACTGGGCTGACAGTTACAGAGTCTACGGATTTGCAGTTTGATTaGTTTTCCATCGATGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GDARSQQRQTGLTVTESTDLQFD*FSIDVD Trigger: GTCAACATCGATGGAAAACAAATCAAACTGCAAATC...CGTAGACTCTGTAACTGTCAGCCCAGTTTGCCTCTGCTGACTCCTGGCATCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTCAGTGAGGGTTTCCTAAAGGAAAAGAGTGTCAGTATGATGGTAGTGGAGTGCTGGGGCCCAATCTaGATGCCATTTGCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSEGFLKEKSVSMMVVECWGPI*MPFASL Trigger: CAATGAGGCAAATGGCATCAAGATTGGGCCCCAGCA...CTCCACTACCATCATACTGACACTCTTTTCCTTTAGGAAACCCTCACTGACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | TCCATGAATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCCGTCGTATCCCAGATTaGCAGTTTGATTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMNIRPCSRAKASPSSLFRRIPD*QFDLFS Trigger: GGAAAACAAATCAAACTGCAAATCTGGGATACGACG...GAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATTCATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172634.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGAATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCTCCCAGATTTGCAGTTaGATTTGTTTTCCATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SMNIRPCSRAKASPSSLFSQICS*ICFPSM Trigger: CATCGATGGAAAACAAATCAAACTGCAAATCTGGGA...GAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATTCATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172488.8 ENSMUST00000172634.2 ENSMUST00000174020.8 |
||
| CDS-3UTR CAA 90 bp | GATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCAGAACGGAAGGACTCTaGCCCAGCCGTATCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DGETRIQLHRDDSKAFCFRTEGL*PSRIPD Trigger: ATCTGGGATACGGCTGGGCAAGAGTCCTTCCGTTCT...GAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | GAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTCATGAGGTCAGGTGGTaGAAGGTTTCGCGTCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: EMGKPGYNYIEMTLRPFVHEVRW*KVSRLV Trigger: CACGAGACGCGAAACCTTCAACCACCTGACCTCATG...AACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | TCCATGAATATAAGGCCGTGCTCACGAGCAAAGGCCTCTCCTTCCTCTCTCTTCGATTTGCAGTTTGATTaGTTTTCCATCGATGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SMNIRPCSRAKASPSSLFDLQFD*FSIDVD Trigger: GTCAACATCGATGGAAAACAAATCAAACTGCAAATC...GAAGAGAGAGGAAGGAGAGGCCTTTGCTCGTGAGCACGGCCTTATATTCATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172488.8 ENSMUST00000172634.2 ENSMUST00000174020.8 |
||
| CDS-3UTR CAA 90 bp | TATCTAACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTACATTGCAGGCTGTCTaGGCTGATGTTTCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YLTELVRENKQPPGSLKPTLQAV*ADVSMN Trigger: ATTCATGGAAACATCAGCCAAGACAGCCTGCAATGT...AGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGTTAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | CTAACAGAGCTGGTTAGAGAGAATAAACAGCCACCTGGGAGTCTGAAGCCTCAGATGCCATTTGCCTCATaGTGGACATCAAATAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LTELVRENKQPPGSLKPQMPFAS*WTSNKP Trigger: AGGTTTATTTGATGTCCACAATGAGGCAAATGGCAT...CTGAGGCTTCAGACTCCCAGGTGGCTGTTTATTCTCTCTAACCAGCTCTGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTAAGTGGAAGGGTGAAACATCGCACACTGAAAAGAGGCTGCTCTCAGCCTCCCAGATTTGCAGTTaGATTTGTTTTCCATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: CFKWKGETSHTEKRLLSASQICS*ICFPSM Trigger: CATCGATGGAAAACAAATCAAACTGCAAATCTGGGA...GGCTGAGAGCAGCCTCTTTTCAGTGTGCGATGTTTCACCCTTCCACTTAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| CDS-3UTR CAA 90 bp | AACTCTTATCATATGACACACAGGTTTCCAAGGCAAGGAAATACACGCAATGAATGCTGGGGCCCAATCTaGATGCCATTTGCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSYHMTHRFPRQGNTRNECWGPI*MPFASS Trigger: TGAAGAGGCAAATGGCATCAAGATTGGGCCCCAGCA...TTCATTGCGTGTATTTCCTTGCCTTGGAAACCTGTGTGTCATATGATAAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100631.11 |
||
| CDS-3UTR CAA 90 bp | GGAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTGTTTTCCATCGATGTaGACCATACGTGCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GDGETRIQLHRDDSKAFCCFPSM*TIRAPN Trigger: GTTTGGAGCACGTATGGTCAACATCGATGGAAAACA...ACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | TGTCACTTAATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATTCCCAGATTTGCAGTTaGATTTGTTTTCCATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: CHLIPDGELQSTVRERWDSQICS*ICFPSM Trigger: CATCGATGGAAAACAAATCAAACTGCAAATCTGGGA...ATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAATTAAGTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | TGTCACTTAATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATATGCCATTTGCCTCATaGTGGACATCAAATAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: CHLIPDGELQSTVRERWDMPFAS*WTSNKP Trigger: AGGTTTATTTGATGTCCACAATGAGGCAAATGGCAT...ATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAATTAAGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | TGTCACTTAATTCCAGATGGTGAGTTGCAGAGTACAGTAAGGGAACGGTGGGATGATTTGCAGTTTGATTaGTTTTCCATCGATGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CHLIPDGELQSTVRERWDDLQFD*FSIDVD Trigger: GTCAACATCGATGGAAAACAAATCAAACTGCAAATC...ATCCCACCGTTCCCTTACTGTACTCTGCAACTCACCATCTGGAATTAAGTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | GATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCACATTGCAGGCTGTCTaGGCTGATGTTTCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: DGETRIQLHRDDSKAFCFTLQAV*ADVSMN Trigger: ATTCATGGAAACATCAGCCAAGACAGCCTGCAATGT...GAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | GAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTACATTGCAGGCTGTCTaGGCTGATGTTTCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: EMGKPGYNYIEMTLRPFVTLQAV*ADVSMN Trigger: ATTCATGGAAACATCAGCCAAGACAGCCTGCAATGT...AACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | AACTCTTATCATATGACACACAGGTTTCCAAGGCAAGGAAATACACGCAATGAATGTTTTCCATCGATGTaGACCATACGTGCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NSYHMTHRFPRQGNTRNECFPSM*TIRAPN Trigger: GTTTGGAGCACGTATGGTCAACATCGATGGAAAACA...TTCATTGCGTGTATTTCCTTGCCTTGGAAACCTGTGTGTCATATGATAAGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| CDS-3UTR CAA 90 bp | CCTATATATTTCTTTGGCTGTATTAATGTAGGCCTCTTCAACATTGCAGGCTGTTGTTTTCCATCGATGTaGACCATACGTGCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PIYFFGCINVGLFNIAGCCFPSM*TIRAPN Trigger: GTTTGGAGCACGTATGGTCAACATCGATGGAAAACA...ACAGCCTGCAATGTTGAAGAGGCCTACATTAATACAGCCAAAGAAATATATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCACCCACCCTGGGTTCACTACAAAACATTTATAACGTGAAACACATACAATCCCAGATTTGCAGTTaGATTTGTTTTCCATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSPTLGSLQNIYNVKHIQSQICS*ICFPSM Trigger: CATCGATGGAAAACAAATCAAACTGCAAATCTGGGA...TTGTATGTGTTTCACGTTATAAATGTTTTGTAGTGAACCCAGGGTGGGTGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | GGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTTTCTTCAGCCGTATCCCAGATTaGCAGTTTGATTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GETRIQLHRDDSKAFCFFSRIPD*QFDLFS Trigger: GGAAAACAAATCAAACTGCAAATCTGGGATACGGCT...GAAGAAACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | CCTATATATTTCTTTGGCTGTATTAATGTAGGCCTCTTCAACATTGCAGGCTGTCCCCGTATCCCAGATTaGCAGTTTGATTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PIYFFGCINVGLFNIAGCPRIPD*QFDLFS Trigger: GGAAAACAAATCAAACTGCAAATCTGGGATACGGGG...ACAGCCTGCAATGTTGAAGAGGCCTACATTAATACAGCCAAAGAAATATATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174020.8 |
||
| CDS-3UTR CAA 90 bp | GGAGATGGGGAAACCAGGATACAATTACATAGAGATGACTCTAAGGCCTTTTGTGATTTGCAGTTTGATTaGTTTTCCATCGATGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GDGETRIQLHRDDSKAFCDLQFD*FSIDVD Trigger: GTCAACATCGATGGAAAACAAATCAAACTGCAAATC...ACAAAAGGCCTTAGAGTCATCTCTATGTAATTGTATCCTGGTTTCCCCATCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 |
||
| CDS-3UTR CAA 90 bp | TTGATGCCATTTGCCTCATTGTGGACATCAAATAAACCTTGCTGGATCTTCCTAGATTTGCAGTTTGATTaGTTTTCCATCGATGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LMPFASLWTSNKPCWIFLDLQFD*FSIDVD Trigger: GTCAACATCGATGGAAAACAAATCAAACTGCAAATC...TAGGAAGATCCAGCAAGGTTTATTTGATGTCCACAATGAGGCAAATGGCATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS-3UTR CAA 90 bp | AATGATGCTCAAGGTTGTACACACATAATAAATAAAAAGGAGCTGGCAACGAGAAGCCGTATCCCAGATTaGCAGTTTGATTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NDAQGCTHIINKKELATRSRIPD*QFDLFS Trigger: GGAAAACAAATCAAACTGCAAATCTGGGATACGGCT...TCTCGTTGCCAGCTCCTTTTTATTTATTATGTGTGTACAACCTTGAGCATCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 |
||
| CDS-3UTR CAA 90 bp | CCTATATATTTCTTTGGCTGTATTAATGTAGGCCTCTTCAACATTGCAGGCTGTGATTTGCAGTTTGATTaGTTTTCCATCGATGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PIYFFGCINVGLFNIAGCDLQFD*FSIDVD Trigger: GTCAACATCGATGGAAAACAAATCAAACTGCAAATC...ACAGCCTGCAATGTTGAAGAGGCCTACATTAATACAGCCAAAGAAATATATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS TCA 72 bp | AGGTCGTGCACGGGCTGGAACCGCTTGTCGGTAAACTaGAGGAGGAGACATGACTTCCCCACACCTGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSCTGWNRLSVN*RRRHDFPTPVS Trigger: AGACACAGGTGTGGGGAAGTCATGTCTCCTCCTTCAGTTTACCGACAAGCGGTTCCAGCCCGTGCACGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS TCA 72 bp | GCTGGCGGGCGTCCTCTAACCATGAGGTCAGGTGGTTaGAGGTTTCGCGTCGTATCCCAGATTTGCAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: AGGRPLTMRSGG*RFRVVSQICSL Trigger: CAAACTGCAAATCTGGGATACGACGCGAAACCTTCAACCACCTGACCTCATGGTTAGAGGACGCCCGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172634.2 |
||
| CDS TCA 72 bp | CTGGAACCGCTTGTCGGTAAACTGAAGGAGGAGACATaGCTTCCCCACACCTGTGTCTCCGATGATGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: LEPLVGKLKEET*LPHTCVSDDDV Trigger: TACATCATCATCGGAGACACAGGTGTGGGGAAGTCATGTCTCCTCCTTCAGTTTACCGACAAGCGGTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022765.14 ENSMUST00000100631.11 ENSMUST00000167116.8 ENSMUST00000172488.8 ENSMUST00000174020.8 |
||
| CDS GCA 72 bp | CCAGCAGGGCTCCAGCTGCTCCCCGTATCCCAGATTTaGAGTTTGATTTGTTTTCCATCGATGTTGACCATA | + |
|
Preference number: 6 (lower is better) Translates to: PAGLQLLPVSQI*SLICFPSMLTI Trigger: TATGGTCAACATCGATGGAAAACAAATCAAACTGCAAATCTGGGATACGGGGAGCAGCTGGAGCCCTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174020.8 |
||
| CDS CAA 72 bp | GGGCTCCAGCTGCTCCCCGTATCCCAGATTTGCAGTTaGATTTGTTTTCCATCGATGTTGACCATACGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLQLLPVSQICS*ICFPSMLTIRA Trigger: AGCACGTATGGTCAACATCGATGGAAAACAAATCAAACTGCAAATCTGGGATACGGGGAGCAGCTGGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174020.8 |
||
| CDS CAA 72 bp | ACCAGCAGGGCTCCAGCTGCTCCCCGTATCCCAGATTaGCAGTTTGATTTGTTTTCCATCGATGTTGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: TSRAPAAPRIPD*QFDLFSIDVDH Trigger: ATGGTCAACATCGATGGAAAACAAATCAAACTGCAAATCTGGGATACGGGGAGCAGCTGGAGCCCTGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174020.8 |
||
| CDS CAA 72 bp | CCAGCTGCTCCCCGTATCCCAGATTTGCAGTTTGATTaGTTTTCCATCGATGTTGACCATACGTGCTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PAAPRIPDLQFD*FSIDVDHTCSK Trigger: TTTGGAGCACGTATGGTCAACATCGATGGAAAACAAATCAAACTGCAAATCTGGGATACGGGGAGCAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174020.8 |
||
| CDS CAA 72 bp | GTCAGGTGGTTGAAGGTTTCGCGTCGTATCCCAGATTaGCAGTTTGATTTGTTTTCCATCGATGTTGACCAN | + |
|
Preference number: 6 (lower is better) Translates to: VRWLKVSRRIPD*QFDLFSIDVDX Trigger: NTGGTCAACATCGATGGAAAACAAATCAAACTGCAAATCTGGGATACGACGCGAAACCTTCAACCACCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172634.2 |
||