Pregenerated sensors for RAB29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026433Ensembl transcript IDs: ENSMUST00000027693.8, ENSMUST00000112386.8, ENSMUST00000125925.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGCCATTCTCTTTACTGAACTGGTCGATCTGGTCCCGGCTCACTaGCCAAGGGGACAGATCACTCTTGTTGGCCAAGAGCAGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: EAILFTELVDLVPAH*PRGQITLVGQEQAG Trigger: CCCTGCCTGCTCTTGGCCAACAAGAGTGATCTGTCCCCTTGGGCAGTGAGCCGGGACCAGATCGACCAGTTCAGTAAAGAGAATGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR CCA 90 bp | TCTGTCCAACCTGTGAAGCCATTCTCTTTACTGAACTGGTCGATCTaGTCCCGGCTCACTGCCCAAGGGGACAGATCACTCTTGTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: SVQPVKPFSLLNWSI*SRLTAQGDRSLLLA Trigger: GGCCAACAAGAGTGATCTGTCCCCTTGGGCAGTGAGCCGGGACCAGATCGACCAGTTCAGTAAAGAGAATGGCTTCACAGGTTGGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR CCA 90 bp | ACTGATGTTTCTGTCCAACCTGTGAAGCCATTCTCTTTACTGAACTaGTCGATCTGGTCCCGGCTCACTGCCCAAGGGGACAGATCACTC | + |
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Preference number: 1 (lower is better) Translates to: TDVSVQPVKPFSLLN*SIWSRLTAQGDRSL Trigger: GAGTGATCTGTCCCCTTGGGCAGTGAGCCGGGACCAGATCGACCAGTTCAGTAAAGAGAATGGCTTCACAGGTTGGACAGAAACATCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR TCA 90 bp | AACGAGGACTCTCATGGCCTCATTAATATTTTTGTTCTCCTTGACTaGTGTTTCTGTCCAACCTGTGAAGCCATTCTCTTTACTGAACTG | + |
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Preference number: 1 (lower is better) Translates to: NEDSHGLINIFVLLD*CFCPTCEAILFTEL Trigger: CAGTTCAGTAAAGAGAATGGCTTCACAGGTTGGACAGAAACATCAGTCAAGGAGAACAAAAATATTAATGAGGCCATGAGAGTCCTCGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCCAAGGGGACAGATCACTCTTGTTGGCCAAGAGCAGGCAGGGCACTGGCGAAACGCTCCTGCCCTaGAATATCCCAGAGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: TAQGDRSLLLAKSRQGTGETLLP*NIPELQ Trigger: CTGCAGCTCTGGGATATTGCAGGGCAGGAGCGTTTC...GCCAGTGCCCTGCCTGCTCTTGGCCAACAAGAGTGATCTGTCCCCTTGGGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR-3UTR TCA 90 bp | CCAACCTGTGAAGCCATTCTCTTTACTGAACTGGTCGATCTGGTCCCGGCTCACGTCGTGTCATGGATGTaGAACGCTCCTGCCCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: PTCEAILFTELVDLVPAHVVSWM*NAPALQ Trigger: TTGCAGGGCAGGAGCGTTTCACATCCATGACACGAC...GTGAGCCGGGACCAGATCGACCAGTTCAGTAAAGAGAATGGCTTCACAGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR-3UTR GCA 90 bp | TCGAGGAATGAGGTGATCACTGTCACACAGAAAATACTAGCTATAGTACACGGGCAAGAACAACGCAGATaGACATGGGTCCCAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SRNEVITVTQKILAIVHGQEQRR*TWVPGS Trigger: GCTGCCTGGGACCCATGTGCATCTGCGTTGTTCTTG...CCCGTGTACTATAGCTAGTATTTTCTGTGTGACAGTGATCACCTCATTCCTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGTTGCTGAAAGTAGTGGCATTGGTGACGTCAAACATAATAACACAGGCAGCAATATCCCAGAGCTaGAGCCGCACCATCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: WLLLKVVALVTSNIITQAAISQS*SRTISE Trigger: CTCAGAGATGGTGCGGCTGCAGCTCTGGGATATTGC...TGCCTGTGTTATTATGTTTGACGTCACCAATGCCACTACTTTCAGCAACAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR-3UTR CCA 90 bp | ACACGGGACATCAGTAAGTCACAGACGACACCCAAGAACAACGCAGATGCACATAATGACTCAGAGACCTaGATAGAAAAGGAGCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TRDISKSQTTPKNNADAHNDSET*IEKEPN Trigger: GTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATT...ATGTGCATCTGCGTTGTTCTTGGGTGTCGTCTGTGACTTACTGATGTCCCGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTAATATTTTTGTTCTCCTTGACTGATGTTTCTGTCCAACCTGTGAAGCCACTGAACTGGTCGATCTaGTCCCGGCTCACTGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SLIFLFSLTDVSVQPVKPLNWSI*SRLTAQ Trigger: TTGGGCAGTGAGCCGGGACCAGATCGACCAGTTCAG...TGGCTTCACAGGTTGGACAGAAACATCAGTCAAGGAGAACAAAAATATTAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR-3UTR CCA 90 bp | GATGTTTCTGTCCAACCTGTGAAGCCATTCTCTTTACTGAACTGGTCGATCTGGTCCTGTTTCCATCTTTaGCTGTTGCTGAAAGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: DVSVQPVKPFSLLNWSIWSCFHL*LLLKVV Trigger: CACTACTTTCAGCAACAGCCAAAGATGGAAACAGGA...CCAGATCGACCAGTTCAGTAAAGAGAATGGCTTCACAGGTTGGACAGAAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR CAA 90 bp | TTTTCAACGAGGACTCTCATGGCCTCATTAATATTTTTGTTCTCCTaGACTGATGTTTCTGTCCAACCTGTGAAGCCATTCTCTTTACTG | + |
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Preference number: 2 (lower is better) Translates to: FSTRTLMASLIFLFS*TDVSVQPVKPFSLL Trigger: CAGTAAAGAGAATGGCTTCACAGGTTGGACAGAAACATCAGTCAAGGAGAACAAAAATATTAATGAGGCCATGAGAGTCCTCGTTGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR CAA 90 bp | TTCATCATCTTTTCAACGAGGACTCTCATGGCCTCATTAATATTTTaGTTCTCCTTGACTGATGTTTCTGTCCAACCTGTGAAGCCATTC | + |
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Preference number: 2 (lower is better) Translates to: FIIFSTRTLMASLIF*FSLTDVSVQPVKPF Trigger: GAATGGCTTCACAGGTTGGACAGAAACATCAGTCAAGGAGAACAAAAATATTAATGAGGCCATGAGAGTCCTCGTTGAAAAGATGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACTTTTAATTCTTTTCATAAACTCATCTCACAGTCGAGGAATGAGGTGATCCAGGAAGAATTGGAATaGCTCAGAGACCTGGATAGA | + |
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Preference number: 2 (lower is better) Translates to: LTFNSFHKLISQSRNEVIQEELE*LRDLDR Trigger: TCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTG...GATCACCTCATTCCTCGACTGTGAGATGAGTTTATGAAAAGAATTAAAAGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTCCAGGCCATTGGCAAGAGAATATTGAATATTCTCAACGGAACTTTTATTCCAACAGGAAGAATTaGAATGACTCAGAGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: SFPGHWQENIEYSQRNFYSNRKN*NDSETW Trigger: CCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGA...ATAAAAGTTCCGTTGAGAATATTCAATATTCTCTTGCCAATGGCCTGGAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| 3UTR-3UTR CCA 90 bp | TCACAAGTGCTCACTTTTAATTCTTTTCATAAACTCATCTCACAGTCGAGGAATTCCTTTCCAGGCCATTaGCAAGAGAATATTGAATAT | + |
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Preference number: 2 (lower is better) Translates to: SQVLTFNSFHKLISQSRNSFPGH*QENIEY Trigger: ATATTCAATATTCTCTTGCCAATGGCCTGGAAAGGA...ATTCCTCGACTGTGAGATGAGTTTATGAAAAGAATTAAAAGTGAGCACTTGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| 3UTR-3UTR CAA 90 bp | GATCTGGTCCCGGCTCACTGCCCAAGGGGACAGATCACTCTTGTTGGCCAAGAGCTGGGTAGTGTGAGCTaGCTGTCCAGATCCTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: DLVPAHCPRGQITLVGQELGSVS*LSRSCF Trigger: GAAACAGGATCTGGACAGCAAGCTCACACTACCCAG...CTCTTGGCCAACAAGAGTGATCTGTCCCCTTGGGCAGTGAGCCGGGACCAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR GCA 72 bp | CTCTTTACTGAACTGGTCGATCTGGTCCCGGCTCACTaGCCAAGGGGACAGATCACTCTTGTTGGCCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LFTELVDLVPAH*PRGQITLVGQE Trigger: CTCTTGGCCAACAAGAGTGATCTGTCCCCTTGGGCAGTGAGCCGGGACCAGATCGACCAGTTCAGTAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR CCA 72 bp | CCTGTGAAGCCATTCTCTTTACTGAACTGGTCGATCTaGTCCCGGCTCACTGCCCAAGGGGACAGATCACTC | + |
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Preference number: 3 (lower is better) Translates to: PVKPFSLLNWSI*SRLTAQGDRSL Trigger: GAGTGATCTGTCCCCTTGGGCAGTGAGCCGGGACCAGATCGACCAGTTCAGTAAAGAGAATGGCTTCACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR CCA 72 bp | TCTGTCCAACCTGTGAAGCCATTCTCTTTACTGAACTaGTCGATCTGGTCCCGGCTCACTGCCCAAGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: SVQPVKPFSLLN*SIWSRLTAQGD Trigger: GTCCCCTTGGGCAGTGAGCCGGGACCAGATCGACCAGTTCAGTAAAGAGAATGGCTTCACAGGTTGGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTGGTCGATCTGGTCCCGGCTCACTGCCCAAGGGGACAGATCACTCTTGTTCTGAAAGTAGTGGCATaGGTGACGTCAAACATAATA | + |
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Preference number: 3 (lower is better) Translates to: ELVDLVPAHCPRGQITLVLKVVA*VTSNII Trigger: TATTATGTTTGACGTCACCAATGCCACTACTTTCAG...AACAAGAGTGATCTGTCCCCTTGGGCAGTGAGCCGGGACCAGATCGACCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGAAGCCATTCTCTTTACTGAACTGGTCGATCTGGTCCCGGCTCACTGCCCATTCCATCTTTGGCTGTaGCTGAAAGTAGTGGCATTG | + |
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Preference number: 3 (lower is better) Translates to: CEAILFTELVDLVPAHCPFHLWL*LKVVAL Trigger: CAATGCCACTACTTTCAGCAACAGCCAAAGATGGAA...TGGGCAGTGAGCCGGGACCAGATCGACCAGTTCAGTAAAGAGAATGGCTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| 3UTR TCA 72 bp | TTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATaGCTCAGAGACCTGGATAGAAAAGGAGCCAAACAG | + |
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Preference number: 3 (lower is better) Translates to: LCQAGIQQEELE*LRDLDRKGAKQ Trigger: CTGTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| 3UTR CCA 72 bp | AACTTTTATGCCAGGCTGGCATCCAACAGGAAGAATTaGAATGACTCAGAGACCTGGATAGAAAAGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: NFYARLASNRKN*NDSETWIEKEP Trigger: TGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| 3UTR CCA 72 bp | ATATTGAATATTCTCAACGGAACTTTTATGCCAGGCTaGCATCCAACAGGAAGAATTGGAATGACTCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: ILNILNGTFMPG*HPTGRIGMTQR Trigger: TCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAAAGTTCCGTTGAGAATATTCAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR GCA 90 bp | GAACTGGTCGATCTGGTCCCGGCTCACTGCCCAAGGGGACAGATCACTCTTGTTGGACCAGAGACGTCTTaGCAACGGCGGCGTCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: ELVDLVPAHCPRGQITLVGPETS*QRRRPP Trigger: TGGGGGACGCCGCCGTTGGCAAGACGTCTCTGGTCC...AACAAGAGTGATCTGTCCCCTTGGGCAGTGAGCCGGGACCAGATCGACCAGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCAAGGGGACAGATCACTCTTGTTGGCCAAGAGCAGGCAGGGCACTGGCTACTTGTAGTGCTTGCTaGAGCTGTCCTGGGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LPKGTDHSCWPRAGRALATCSAC*SCPGSS Trigger: GCTACTCCCAGGACAGCTTCAGCAAGCACTACAAGT...AGCCAGTGCCCTGCCTGCTCTTGGCCAACAAGAGTGATCTGTCCCCTTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| CDS-3UTR GCA 90 bp | AGGCTGGCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGCTGGTCCCGGCTCACTaGCCAAGGGGACAGATCACT | + |
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Preference number: 4 (lower is better) Translates to: RLASNRKNWNDSETWIEKLVPAH*PRGQIT Trigger: AGTGATCTGTCCCCTTGGGCAGTGAGCCGGGACCAG...CTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | GGGACATCAGTAAGTCACAGACGACACCCAAGAACAACGCAGATGCACATGGGTACCACTGGAGAACCTTaGGAGCAAAATCCACTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GTSVSHRRHPRTTQMHMGTTGEP*EQNPLP Trigger: TGGGAGTGGATTTTGCTCTCAAGGTTCTCCAGTGGT...ACCCATGTGCATCTGCGTTGTTCTTGGGTGTCGTCTGTGACTTACTGATGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR TCA 90 bp | TTTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGAGTCGTGTCATGGATGTaGAACGCTCCTGCCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: FMPGWHPTGRIGMTQRPGVVSWM*NAPALQ Trigger: TTGCAGGGCAGGAGCGTTTCACATCCATGACACGAC...TCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | ACACGGGACATCAGTAAGTCACAGACGACACCCAAGAACAACGCAGATGCACATGCTTGGCTTGGAGATTaGTGTAGTTCCCTTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TRDISKSQTTPKNNADAHAWLGD*CSSLGW Trigger: CCACCCAAGGGAACTACATCAATCTCCAAGCCAAGC...ATGTGCATCTGCGTTGTTCTTGGGTGTCGTCTGTGACTTACTGATGTCCCGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR GCA 90 bp | AATGAGGTGATCACTGTCACACAGAAAATACTAGCTATAGTACACGGGACATCAGGACCAGAGACGTCTTaGCAACGGCGGCGTCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: NEVITVTQKILAIVHGTSGPETS*QRRRPP Trigger: TGGGGGACGCCGCCGTTGGCAAGACGTCTCTGGTCC...TGATGTCCCGTGTACTATAGCTAGTATTTTCTGTGTGACAGTGATCACCTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR GCA 90 bp | TCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAAACCTGGTCCCGGCTCACTaGCCAAGGGGACAGATCACT | + |
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Preference number: 4 (lower is better) Translates to: SNRKNWNDSETWIEKEPNLVPAH*PRGQIT Trigger: AGTGATCTGTCCCCTTGGGCAGTGAGCCGGGACCAG...GTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CCA 90 bp | TCTCAACGGAACTTTTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATGACCTGAACTGGTCGATCTaGTCCCGGCTCACTGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SQRNFYARLASNRKNWNDLNWSI*SRLTAQ Trigger: TTGGGCAGTGAGCCGGGACCAGATCGACCAGTTCAG...GTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAAAGTTCCGTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR GCA 90 bp | TCTCAACGGAACTTTTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATGACGAAACGCTCCTGCCCTaGAATATCCCAGAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SQRNFYARLASNRKNWNDETLLP*NIPELQ Trigger: CTGCAGCTCTGGGATATTGCAGGGCAGGAGCGTTTC...GTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAAAGTTCCGTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | TTTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGAACCACTGGAGAACCTTaGGAGCAAAATCCACTCCCA | + |
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Preference number: 4 (lower is better) Translates to: FMPGWHPTGRIGMTQRPGTTGEP*EQNPLP Trigger: TGGGAGTGGATTTTGCTCTCAAGGTTCTCCAGTGGT...TCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | TGTCACACAGAAAATACTAGCTATAGTACACGGGACATCAGTAAGTCACAGACGCAGCCGCACCATCTCTaGGTCAGACCACTGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: CHTENTSYSTRDISKSQTQPHHL*VRPLEN Trigger: GTTCTCCAGTGGTCTGACTCAGAGATGGTGCGGCTG...CGTCTGTGACTTACTGATGTCCCGTGTACTATAGCTAGTATTTTCTGTGTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR TCA 90 bp | AACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAAACAGACAGCCGCACCATCTCTaGGTCAGACCACTGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: NRKNWNDSETWIEKEPNRQPHHL*VRPLEN Trigger: GTTCTCCAGTGGTCTGACTCAGAGATGGTGCGGCTG...TCTGTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR GCA 90 bp | TCCTTTCCAGGCCATTGGCAAGAGAATATTGAATATTCTCAACGGAACTTTTATGGACCAGAGACGTCTTaGCAACGGCGGCGTCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SFPGHWQENIEYSQRNFYGPETS*QRRRPP Trigger: TGGGGGACGCCGCCGTTGGCAAGACGTCTCTGGTCC...ATAAAAGTTCCGTTGAGAATATTCAATATTCTCTTGCCAATGGCCTGGAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | TCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAAACACTTGTAGTGCTTGCTaGAGCTGTCCTGGGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SNRKNWNDSETWIEKEPNTCSAC*SCPGSS Trigger: GCTACTCCCAGGACAGCTTCAGCAAGCACTACAAGT...GTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | AACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAAACAGAGTCGTGTCATGGATGTaGAACGCTCCTGCCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: NRKNWNDSETWIEKEPNRVVSWM*NAPALQ Trigger: TTGCAGGGCAGGAGCGTTTCACATCCATGACACGAC...TCTGTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | AGGCTGGCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGAGCCATTCTCTTTACTaGACTGGTCGATCTGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RLASNRKNWNDSETWIEKSHSLY*TGRSGP Trigger: GGGACCAGATCGACCAGTTCAGTAAAGAGAATGGCT...CTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR GCA 90 bp | CACTGTCACACAGAAAATACTAGCTATAGTACACGGGACATCAGTAAGTCACAGGCAATATCCCAGAGCTaGAGCCGCACCATCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HCHTENTSYSTRDISKSQAISQS*SRTISE Trigger: CTCAGAGATGGTGCGGCTGCAGCTCTGGGATATTGC...CTGTGACTTACTGATGTCCCGTGTACTATAGCTAGTATTTTCTGTGTGACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR GCA 90 bp | AACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAAACAGAGAAACGCTCCTGCCCTaGAATATCCCAGAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: NRKNWNDSETWIEKEPNRETLLP*NIPELQ Trigger: CTGCAGCTCTGGGATATTGCAGGGCAGGAGCGTTTC...TCTGTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CCA 90 bp | TCGAGGAATGAGGTGATCACTGTCACACAGAAAATACTAGCTATAGTACACGGGACAGATCACTCTTGTTaGCCAAGAGCAGGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SRNEVITVTQKILAIVHGTDHSC*PRAGRA Trigger: TGCCCTGCCTGCTCTTGGCCAACAAGAGTGATCTGT...CCCGTGTACTATAGCTAGTATTTTCTGTGTGACAGTGATCACCTCATTCCTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR TCA 90 bp | CACTGTCACACAGAAAATACTAGCTATAGTACACGGGACATCAGTAAGTCACAGACTTGTAGTGCTTGCTaGAGCTGTCCTGGGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: HCHTENTSYSTRDISKSQTCSAC*SCPGSS Trigger: GCTACTCCCAGGACAGCTTCAGCAAGCACTACAAGT...CTGTGACTTACTGATGTCCCGTGTACTATAGCTAGTATTTTCTGTGTGACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR TCA 90 bp | ACACGGGACATCAGTAAGTCACAGACGACACCCAAGAACAACGCAGATGCACATTTTGTTCTCCTTGACTaGTGTTTCTGTCCAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRDISKSQTTPKNNADAHFVLLD*CFCPTC Trigger: ACAGGTTGGACAGAAACATCAGTCAAGGAGAACAAA...ATGTGCATCTGCGTTGTTCTTGGGTGTCGTCTGTGACTTACTGATGTCCCGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR GCA 90 bp | GCTCCTTTCCAGGCCATTGGCAAGAGAATATTGAATATTCTCAACGGAACTTTTGCAATATCCCAGAGCTaGAGCCGCACCATCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: APFQAIGKRILNILNGTFAISQS*SRTISE Trigger: CTCAGAGATGGTGCGGCTGCAGCTCTGGGATATTGC...AAAAGTTCCGTTGAGAATATTCAATATTCTCTTGCCAATGGCCTGGAAAGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | GCTCCTTTCCAGGCCATTGGCAAGAGAATATTGAATATTCTCAACGGAACTTTTGCTTGGCTTGGAGATTaGTGTAGTTCCCTTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: APFQAIGKRILNILNGTFAWLGD*CSSLGW Trigger: CCACCCAAGGGAACTACATCAATCTCCAAGCCAAGC...AAAAGTTCCGTTGAGAATATTCAATATTCTCTTGCCAATGGCCTGGAAAGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CCA 90 bp | TCTCAACGGAACTTTTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATGACTCTGAGTCAGACCACTaGAGAACCTTGAGAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQRNFYARLASNRKNWNDSESDH*RTLRAK Trigger: TTTTGCTCTCAAGGTTCTCCAGTGGTCTGACTCAGA...GTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAAAGTTCCGTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CCA 90 bp | CACAAGTGCTCACTTTTAATTCTTTTCATAAACTCATCTCACAGTCGAGGAATGCTGAACTGGTCGATCTaGTCCCGGCTCACTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HKCSLLILFINSSHSRGMLNWSI*SRLTAQ Trigger: TTGGGCAGTGAGCCGGGACCAGATCGACCAGTTCAG...CATTCCTCGACTGTGAGATGAGTTTATGAAAAGAATTAAAAGTGAGCACTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CCA 90 bp | GCTCCTTTCCAGGCCATTGGCAAGAGAATATTGAATATTCTCAACGGAACTTTTTTCTCTTTACTGAACTaGTCGATCTGGTCCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: APFQAIGKRILNILNGTFFSLLN*SIWSRL Trigger: GAGCCGGGACCAGATCGACCAGTTCAGTAAAGAGAA...AAAAGTTCCGTTGAGAATATTCAATATTCTCTTGCCAATGGCCTGGAAAGGAGC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CCA 90 bp | CACTGTCACACAGAAAATACTAGCTATAGTACACGGGACATCAGTAAGTCACAGTCTGAGTCAGACCACTaGAGAACCTTGAGAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HCHTENTSYSTRDISKSQSESDH*RTLRAK Trigger: TTTTGCTCTCAAGGTTCTCCAGTGGTCTGACTCAGA...CTGTGACTTACTGATGTCCCGTGTACTATAGCTAGTATTTTCTGTGTGACAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CCA 90 bp | TCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAAACTCCTGTTTCCATCTTTaGCTGTTGCTGAAAGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNRKNWNDSETWIEKEPNSCFHL*LLLKVV Trigger: CACTACTTTCAGCAACAGCCAAAGATGGAAACAGGA...GTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTCCAGGCCATTGGCAAGAGAATATTGAATATTCTCAACGGAACTTTTATAGCCATTCTCTTTACTaGACTGGTCGATCTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPGHWQENIEYSQRNFYSHSLY*TGRSGP Trigger: GGGACCAGATCGACCAGTTCAGTAAAGAGAATGGCT...ATAAAAGTTCCGTTGAGAATATTCAATATTCTCTTGCCAATGGCCTGGAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | AACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAAACAGATTTGTTCTCCTTGACTaGTGTTTCTGTCCAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NRKNWNDSETWIEKEPNRFVLLD*CFCPTC Trigger: ACAGGTTGGACAGAAACATCAGTCAAGGAGAACAAA...TCTGTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR TCA 90 bp | GCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCATATTTTTGTTCTCCTTaGCTGATGTTTCTGTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASNRKNWNDSETWIEKEPYFCSP*LMFLSN Trigger: GTTGGACAGAAACATCAGTCAAGGAGAACAAAAATA...TGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CCA 90 bp | CTCACTTTTAATTCTTTTCATAAACTCATCTCACAGTCGAGGAATGAGGTGATCTTCTCTTTACTGAACTaGTCGATCTGGTCCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTFNSFHKLISQSRNEVIFSLLN*SIWSRL Trigger: GAGCCGGGACCAGATCGACCAGTTCAGTAAAGAGAA...GATCACCTCATTCCTCGACTGTGAGATGAGTTTATGAAAAGAATTAAAAGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CCA 90 bp | AACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAAACAGATGTAGTTCCCTTGGGTaGACAAAGACATCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NRKNWNDSETWIEKEPNRCSSLG*TKTSHL Trigger: AAGATGTGATGTCTTTGTCCACCCAAGGGAACTACA...TCTGTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CCA 90 bp | AGGCTGGCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGACATCACATCTTCCCTaGAATTGTTCATCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLASNRKNWNDSETWIEKTSHLP*NCSSSF Trigger: AAAAGATGATGAACAATTCCAGGGAAGATGTGATGT...CTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| 3UTR CAA 72 bp | TTTTCAACGAGGACTCTCATGGCCTCATTAATATTTTaGTTCTCCTTGACTGATGTTTCTGTCCAACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSTRTLMASLIF*FSLTDVSVQPV Trigger: CACAGGTTGGACAGAAACATCAGTCAAGGAGAACAAAAATATTAATGAGGCCATGAGAGTCCTCGTTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| CDS-3UTR TCA 90 bp | AATGAGGTGATCACTGTCACACAGAAAATACTAGCTATAGTACACGGGACATCATATTTTTGTTCTCCTTaGCTGATGTTTCTGTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NEVITVTQKILAIVHGTSYFCSP*LMFLSN Trigger: GTTGGACAGAAACATCAGTCAAGGAGAACAAAAATA...TGATGTCCCGTGTACTATAGCTAGTATTTTCTGTGTGACAGTGATCACCTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CCA 90 bp | CACAAGTGCTCACTTTTAATTCTTTTCATAAACTCATCTCACAGTCGAGGAATGTGTAGTTCCCTTGGGTaGACAAAGACATCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKCSLLILFINSSHSRGMCSSLG*TKTSHL Trigger: AAGATGTGATGTCTTTGTCCACCCAAGGGAACTACA...CATTCCTCGACTGTGAGATGAGTTTATGAAAAGAATTAAAAGTGAGCACTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CCA 90 bp | TCACAAGTGCTCACTTTTAATTCTTTTCATAAACTCATCTCACAGTCGAGGAATTCCTGTTTCCATCTTTaGCTGTTGCTGAAAGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQVLTFNSFHKLISQSRNSCFHL*LLLKVV Trigger: CACTACTTTCAGCAACAGCCAAAGATGGAAACAGGA...ATTCCTCGACTGTGAGATGAGTTTATGAAAAGAATTAAAAGTGAGCACTTGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CAA 90 bp | CTGCCCAAGGGGACAGATCACTCTTGTTGGCCAAGAGCAGGCAGGGCACTGGCTTGGACCAGAGACGTCTaGCCAACGGCGGCGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPKGTDHSCWPRAGRALAWTRDV*PTAASP Trigger: GGGGGACGCCGCCGTTGGCAAGACGTCTCTGGTCCA...AGCCAGTGCCCTGCCTGCTCTTGGCCAACAAGAGTGATCTGTCCCCTTGGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
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| CDS-3UTR CAA 90 bp | GCTCCTTTCCAGGCCATTGGCAAGAGAATATTGAATATTCTCAACGGAACTTTTTGGACCAGAGACGTCTaGCCAACGGCGGCGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: APFQAIGKRILNILNGTFWTRDV*PTAASP Trigger: GGGGGACGCCGCCGTTGGCAAGACGTCTCTGGTCCA...AAAAGTTCCGTTGAGAATATTCAATATTCTCTTGCCAATGGCCTGGAAAGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | TTTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGAGACAGATCACTCTTGTaGGCCAAGAGCAGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FMPGWHPTGRIGMTQRPGDRSLL*AKSRQG Trigger: GCCCTGCCTGCTCTTGGCCAACAAGAGTGATCTGTC...TCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | AGGCTGGCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGACAGATCACTCTTGTaGGCCAAGAGCAGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLASNRKNWNDSETWIEKDRSLL*AKSRQG Trigger: GCCCTGCCTGCTCTTGGCCAACAAGAGTGATCTGTC...CTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | GCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAGGGGACAGATCACTCTaGTTGGCCAAGAGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASNRKNWNDSETWIEKEPGDRSL*LAKSRQ Trigger: CTGCCTGCTCTTGGCCAACAAGAGTGATCTGTCCCC...TGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | CTCACTTTTAATTCTTTTCATAAACTCATCTCACAGTCGAGGAATGAGGTGATCTGGACCAGAGACGTCTaGCCAACGGCGGCGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTFNSFHKLISQSRNEVIWTRDV*PTAASP Trigger: GGGGGACGCCGCCGTTGGCAAGACGTCTCTGGTCCA...GATCACCTCATTCCTCGACTGTGAGATGAGTTTATGAAAAGAATTAAAAGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CAA 90 bp | TTTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGAGACCACTGGAGAACCTaGAGAGCAAAATCCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FMPGWHPTGRIGMTQRPGDHWRT*RAKSTP Trigger: GGGAGTGGATTTTGCTCTCAAGGTTCTCCAGTGGTC...TCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | TCTCAACGGAACTTTTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATGACGACCACTGGAGAACCTaGAGAGCAAAATCCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQRNFYARLASNRKNWNDDHWRT*RAKSTP Trigger: GGGAGTGGATTTTGCTCTCAAGGTTCTCCAGTGGTC...GTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAAAGTTCCGTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | AGGCTGGCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGCTGGGTAGTGTGAGCTaGCTGTCCAGATCCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLASNRKNWNDSETWIEKLGSVS*LSRSCF Trigger: GAAACAGGATCTGGACAGCAAGCTCACACTACCCAG...CTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | TCTCAACGGAACTTTTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATGACAGAGGAGGGCTTGGCTaGGAGATTGATGTAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQRNFYARLASNRKNWNDRGGLG*EIDVVP Trigger: GGGAACTACATCAATCTCCAAGCCAAGCCCTCCTCT...GTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAAAGTTCCGTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | TCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAAACCTGGGTAGTGTGAGCTaGCTGTCCAGATCCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SNRKNWNDSETWIEKEPNLGSVS*LSRSCF Trigger: GAAACAGGATCTGGACAGCAAGCTCACACTACCCAG...GTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | TCGAGGAATGAGGTGATCACTGTCACACAGAAAATACTAGCTATAGTACACGGGAGAGGAGGGCTTGGCTaGGAGATTGATGTAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRNEVITVTQKILAIVHGRGGLG*EIDVVP Trigger: GGGAACTACATCAATCTCCAAGCCAAGCCCTCCTCT...CCCGTGTACTATAGCTAGTATTTTCTGTGTGACAGTGATCACCTCATTCCTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CAA 90 bp | ACACGGGACATCAGTAAGTCACAGACGACACCCAAGAACAACGCAGATGCACATCTGAAAGTAGTGGCATaGGTGACGTCAAACATAATA | + |
|
Preference number: 5 (lower is better) Translates to: TRDISKSQTTPKNNADAHLKVVA*VTSNII Trigger: TATTATGTTTGACGTCACCAATGCCACTACTTTCAG...ATGTGCATCTGCGTTGTTCTTGGGTGTCGTCTGTGACTTACTGATGTCCCGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CAA 90 bp | TTTATGCCAGGCTGGCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGAACATCTTCCCTGGAATaGTTCATCATCTTTTCAACG | + |
|
Preference number: 5 (lower is better) Translates to: FMPGWHPTGRIGMTQRPGTSSLE*FIIFST Trigger: CGTTGAAAAGATGATGAACAATTCCAGGGAAGATGT...TCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGCCAGCCTGGCATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | GCATCCAACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCACTGAAAGTAGTGGCATaGGTGACGTCAAACATAATA | + |
|
Preference number: 5 (lower is better) Translates to: ASNRKNWNDSETWIEKEPLKVVA*VTSNII Trigger: TATTATGTTTGACGTCACCAATGCCACTACTTTCAG...TGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTTGGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | AACAGGAAGAATTGGAATGACTCAGAGACCTGGATAGAAAAGGAGCCAAACAGATTCCATCTTTGGCTGTaGCTGAAAGTAGTGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: NRKNWNDSETWIEKEPNRFHLWL*LKVVAL Trigger: CAATGCCACTACTTTCAGCAACAGCCAAAGATGGAA...TCTGTTTGGCTCCTTTTCTATCCAGGTCTCTGAGTCATTCCAATTCTTCCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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| CDS-3UTR CAA 90 bp | ATCTCACAGTCGAGGAATGAGGTGATCACTGTCACACAGAAAATACTAGCTATATTCCATCTTTGGCTGTaGCTGAAAGTAGTGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: ISQSRNEVITVTQKILAIFHLWL*LKVVAL Trigger: CAATGCCACTACTTTCAGCAACAGCCAAAGATGGAA...TATAGCTAGTATTTTCTGTGTGACAGTGATCACCTCATTCCTCGACTGTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CAA 90 bp | AATGAGGTGATCACTGTCACACAGAAAATACTAGCTATAGTACACGGGACATCAATTGATGTAGTTCCCTaGGGTGGACAAAGACATCAC | + |
|
Preference number: 5 (lower is better) Translates to: NEVITVTQKILAIVHGTSIDVVP*GGQRHH Trigger: GTGATGTCTTTGTCCACCCAAGGGAACTACATCAAT...TGATGTCCCGTGTACTATAGCTAGTATTTTCTGTGTGACAGTGATCACCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CAA 90 bp | ACTGTCACACAGAAAATACTAGCTATAGTACACGGGACATCAGTAAGTCACAGAACATCTTCCCTGGAATaGTTCATCATCTTTTCAACG | + |
|
Preference number: 5 (lower is better) Translates to: TVTQKILAIVHGTSVSHRTSSLE*FIIFST Trigger: CGTTGAAAAGATGATGAACAATTCCAGGGAAGATGT...TCTGTGACTTACTGATGTCCCGTGTACTATAGCTAGTATTTTCTGTGTGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027693.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTCCAGGCCATTGGCAAGAGAATATTGAATATTCTCAACGGAACTTTTATATTGATGTAGTTCCCTaGGGTGGACAAAGACATCAC | + |
|
Preference number: 5 (lower is better) Translates to: SFPGHWQENIEYSQRNFYIDVVP*GGQRHH Trigger: GTGATGTCTTTGTCCACCCAAGGGAACTACATCAAT...ATAAAAGTTCCGTTGAGAATATTCAATATTCTCTTGCCAATGGCCTGGAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
||
| CDS TCA 72 bp | CTGGAGAACCTCCCACGGTGGACTTGTAGTGCTTGCTaGAGCTGTCCTGGGAGTAGCGCTGGACCAGAGACG | + |
|
Preference number: 6 (lower is better) Translates to: LENLPRWTCSAC*SCPGSSAGPET Trigger: CGTCTCTGGTCCAGCGCTACTCCCAGGACAGCTTCAGCAAGCACTACAAGTCCACCGTGGGAGGTTCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125925.2 |
||
| CDS TCA 72 bp | CAAAATCCACTCCCACGGTGGACTTGTAGTGCTTGCTaGAGCTGTCCTGGGAGTAGCGCTGGACCAGAGACG | + |
|
Preference number: 6 (lower is better) Translates to: QNPLPRWTCSAC*SCPGSSAGPET Trigger: CGTCTCTGGTCCAGCGCTACTCCCAGGACAGCTTCAGCAAGCACTACAAGTCCACCGTGGGAGTGGATTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
||
| CDS TCA 72 bp | AGCATGTCCAGCCAGAGGAGGGCTTGGCTTGGAGATTaGTGTAGTTCCCTTGGGTGGACAAAGACATCACAT | + |
|
Preference number: 6 (lower is better) Translates to: SMSSQRRAWLGD*CSSLGWTKTSH Trigger: ATGTGATGTCTTTGTCCACCCAAGGGAACTACATCAATCTCCAAGCCAAGCCCTCCTCTGGCTGGACATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
||
| CDS CAA 90 bp | TGTCCAGCCAGAGGAGGGCTTGGCTTGGAGATTGATGTAGTTCCCTaGGGTGGACAAAGACATCACATCTTCCCTGGAATTGTTCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: CPARGGLGLEIDVVP*GGQRHHIFPGIVHH Trigger: ATGATGAACAATTCCAGGGAAGATGTGATGTCTTTGTCCACCCAAGGGAACTACATCAATCTCCAAGCCAAGCCCTCCTCTGGCTGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
||
| CDS CAA 72 bp | AGAGGAGGGCTTGGCTTGGAGATTGATGTAGTTCCCTaGGGTGGACAAAGACATCACATCTTCCCTGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: RGGLGLEIDVVP*GGQRHHIFPGI Trigger: AATTCCAGGGAAGATGTGATGTCTTTGTCCACCCAAGGGAACTACATCAATCTCCAAGCCAAGCCCTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027693.8 ENSMUST00000112386.8 |
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