Pregenerated sensors for RAB27B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024511Ensembl transcript IDs: ENSMUST00000069749.9, ENSMUST00000117692.8, ENSMUST00000121693.8
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACCCAAGTTCTCACATCTACTATTCAGAGGCCCTGCATCTTCCTTaGCCATCTCCAGACATTTTAGAGAGTTACTACACATGTCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: NPSSHIYYSEALHLP*PSPDILESYYTCQQ Trigger: TTGCTGACATGTGTAGTAACTCTCTAAAATGTCTGGAGATGGGCAAGGAAGATGCAGGGCCTCTGAATAGTAGATGTGAGAACTTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR CCA 90 bp | CCAGATGCCAATAATGTTTTTGCATCCTTTGCTAACAATATCCGATaGGTTCAGCCATACCACTGTCTCTGTGAGGCTCTTCAGAGACAT | + |
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Preference number: 1 (lower is better) Translates to: PDANNVFASFANNIR*VQPYHCLCEALQRH Trigger: ATGTCTCTGAAGAGCCTCACAGAGACAGTGGTATGGCTGAACCCATCGGATATTGTTAGCAAAGGATGCAAAAACATTATTGGCATCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR GCA 90 bp | AAACCGGAAATAGATGTAGGAGAGCTCACGACATTCACCAGATTTTaGCATAGCCCTGGTCATTTCTTTTCACTTTGCTTCCAGAAGACA | + |
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Preference number: 1 (lower is better) Translates to: KPEIDVGELTTFTRF*HSPGHFFSLCFQKT Trigger: TGTCTTCTGGAAGCAAAGTGAAAAGAAATGACCAGGGCTATGGCAAAATCTGGTGAATGTCGTGAGCTCTCCTACATCTATTTCCGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR TCA 90 bp | ATCAGAAACGATGTTAAAGGTTTGGATCATTTGACTAGGAGCCTTTaGAGGCATTGCCAATCCCAATGGGTGATACTAGCTTCTAATCTG | + |
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Preference number: 1 (lower is better) Translates to: IRNDVKGLDHLTRSL*RHCQSQWVILASNL Trigger: CAGATTAGAAGCTAGTATCACCCATTGGGATTGGCAATGCCTTCAAAGGCTCCTAGTCAAATGATCCAAACCTTTAACATCGTTTCTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR CCA 90 bp | TACAGGTGTCAACAACATTACACAAACCCAGATACCACAAAACCATaGGATGCTATGATTTCTGAAGCCACTGGAACTTTGATACAGCAA | + |
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Preference number: 1 (lower is better) Translates to: YRCQQHYTNPDTTKP*DAMISEATGTLIQQ Trigger: TTGCTGTATCAAAGTTCCAGTGGCTTCAGAAATCATAGCATCCCATGGTTTTGTGGTATCTGGGTTTGTGTAATGTTGTTGACACCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR TCA 90 bp | GTAAAACACATTATACATTTCCAGTCAAATGCAGTGACCTCAAAGTaGCTGACTGTCCATTTAGCTGTCCTCCTACAATTAGTGTGGATG | + |
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Preference number: 1 (lower is better) Translates to: VKHIIHFQSNAVTSK*LTVHLAVLLQLVWM Trigger: CATCCACACTAATTGTAGGAGGACAGCTAAATGGACAGTCAGTCACTTTGAGGTCACTGCATTTGACTGGAAATGTATAATGTGTTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR GCA 90 bp | TACTCTTACAGGCACATTTTCATATTTACAGGCATCATTGCCCTCTaGTTCATGCTAGTTAGCAATGATGCTCTTCAAACAGATCGTGAA | + |
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Preference number: 1 (lower is better) Translates to: YSYRHIFIFTGIIAL*FMLVSNDALQTDRE Trigger: TTCACGATCTGTTTGAAGAGCATCATTGCTAACTAGCATGAAGCAGAGGGCAATGATGCCTGTAAATATGAAAATGTGCCTGTAAGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR GCA 90 bp | TTTCATCTAACTTGTTCAAGCATCTTATTCCCATGTTTCATTTTCTaGCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: FHLTCSSILFPCFIF*QGISIQGPILVSLP Trigger: TGGCAAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACATGGGAATAAGATGCTTGAACAAGTTAGATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR GCA 90 bp | GCTAATTTTCAAGCAACTGCTTTCTGTGACAGGTTAGGAGAACGTTaGAATAATCTCCAGATGCCAATAATGTTTTTGCATCCTTTGCTA | + |
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Preference number: 1 (lower is better) Translates to: ANFQATAFCDRLGER*NNLQMPIMFLHPLL Trigger: TAGCAAAGGATGCAAAAACATTATTGGCATCTGGAGATTATTGCAACGTTCTCCTAACCTGTCACAGAAAGCAGTTGCTTGAAAATTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR TCA 90 bp | CTTAATGTCATGTCTCAGATCTCTGAAGGCATCTTAGAAATGAGCTaGCATCACCATGGTAGAATATCAAGAGGGAAATACAATAGATTC | + |
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Preference number: 1 (lower is better) Translates to: LNVMSQISEGILEMS*HHHGRISRGKYNRF Trigger: GAATCTATTGTATTTCCCTCTTGATATTCTACCATGGTGATGTCAGCTCATTTCTAAGATGCCTTCAGAGATCTGAGACATGACATTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR CCA 90 bp | CACAACCTCTTCAGGAACACATTAAGTAACCCACACTTAAAGTCTTaGGTTACATTTAAATCATTAGACAAATCTGAGCTCTGTATAGAA | + |
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Preference number: 1 (lower is better) Translates to: HNLFRNTLSNPHLKS*VTFKSLDKSELCIE Trigger: TTCTATACAGAGCTCAGATTTGTCTAATGATTTAAATGTAACCCAAGACTTTAAGTGTGGGTTACTTAATGTGTTCCTGAAGAGGTTGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCACGTGGTCCTGAAGTTCTTATTTCTGGCCATCTTCCTTTCGACAACAGATGGTCACAGAGGAGTTTaGGGCACTGAGTTCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SHVVLKFLFLAIFLSTTDGHRGV*GTEFRL Trigger: CAGCCTGAACTCAGTGCCTCAAACTCCTCTGTGACC...ATCTGTTGTCGAAAGGAAGATGGCCAGAAATAAGAACTTCAGGACCACGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCACGTGGTCCTGAAGTTCTTATTTCTGGCCATCTTCCTTTCGACAACAGATGTTCCTACAGAAGCCTaGCATTCACCCACCCACGAC | + |
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Preference number: 2 (lower is better) Translates to: SHVVLKFLFLAIFLSTTDVPTEA*HSPTHD Trigger: GTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAAC...ATCTGTTGTCGAAAGGAAGATGGCCAGAAATAAGAACTTCAGGACCACGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCATTGCTCATGAGCTACTaGTCAATGACAACATCATGG | + |
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Preference number: 2 (lower is better) Translates to: QVPTEACHSPTHDFTSNSLLMSY*SMTTSW Trigger: CCATGATGTTGTCATTGAGCAGTAGCTCATGAGCAA...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGAGAGATGGAATCCCTTCAGCATCATAGGGCTCACCATTCTCTGTTATAATCCTAACAGAGAATaGCTTGTACAAGCTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: EMERWNPFSIIGLTILCYNPNRE*LVQAGV Trigger: CACCCCAGCTTGTACAAGTCATTCTCTGTTAGGATT...ATAACAGAGAATGGTGAGCCCTATGATGCTGAAGGGATTCCATCTCTCCATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCACGTGGTCCTGAAGTTCTTATTTCTGGCCATCTTCCTTTCGACAACAGATATGACTTGTACAAGCTaGGGTGCTGTGCTATTGACA | + |
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Preference number: 2 (lower is better) Translates to: SHVVLKFLFLAIFLSTTDMTCTS*GAVLLT Trigger: TGTCAATAGCACAGCACCCCAGCTTGTACAAGTCAT...ATCTGTTGTCGAAAGGAAGATGGCCAGAAATAAGAACTTCAGGACCACGTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR CAA 90 bp | AAACCCAAGTTCTCACATCTACTATTCAGAGGCCCTGCATCTTCCTaGCCCATCTCCAGACATTTTAGAGAGTTACTACACATGTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KPKFSHLLFRGPASS*PISRHFRELLHMSA Trigger: TGCTGACATGTGTAGTAACTCTCTAAAATGTCTGGAGATGGGCAAGGAAGATGCAGGGCCTCTGAATAGTAGATGTGAGAACTTGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCAATATGTCTTCCCCAGTaGAAATATAGAAGTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: QVPTEACHSPTHDFTSNSICLPQ*KYRSVS Trigger: ACTCACACTTCTATATTTGCACTGGGGAAGACATAT...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR-3UTR GCA 90 bp | ACAATGATAAACTGGGAGATGGAGAGATGGAATCCCTTCAGCATCATAGGGCTCACATTCACCAGATTTTaGCATAGCCCTGGTCATTTC | + |
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Preference number: 2 (lower is better) Translates to: TMINWEMERWNPFSIIGLTFTRF*HSPGHF Trigger: GAAATGACCAGGGCTATGGCAAAATCTGGTGAATGT...GAGCCCTATGATGCTGAAGGGATTCCATCTCTCCATCTCCCAGTTTATCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCATCAATGACAACATCATaGTTTGACATTGTCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QVPTEACHSPTHDFTSNSSMTTS*FDIVSG Trigger: TCCTGAGACAATGTCAAACCATGATGTTGTCATTGA...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGATGGAATCCCTTCAGCATCATAGGGCTCACCATTCTCTGTTATGGAAATCTCAGAACAGGTTACTaGGCAGACACAGTCATTCTT | + |
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Preference number: 2 (lower is better) Translates to: ERWNPFSIIGLTILCYGNLRTGY*ADTVIL Trigger: AAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAG...ATTTCCATAACAGAGAATGGTGAGCCCTATGATGCTGAAGGGATTCCATCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCACGTGGTCCTGAAGTTCTTATTTCTGGCCATCTTCCTTTCGACAACAGATAATGAGTTATGTGCTTaGAGACAAAACTGGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: SHVVLKFLFLAIFLSTTDNELCA*RQNWSQ Trigger: CTGTGACCAGTTTTGTCTCCAAGCACATAACTCATT...ATCTGTTGTCGAAAGGAAGATGGCCAGAAATAAGAACTTCAGGACCACGTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR CAA 90 bp | GAACGTTGCAATAATCTCCAGATGCCAATAATGTTTTTGCATCCTTaGCTAACAATATCCGATGGGTTCAGCCATACCACTGTCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: ERCNNLQMPIMFLHP*LTISDGFSHTTVSV Trigger: CACAGAGACAGTGGTATGGCTGAACCCATCGGATATTGTTAGCAAAGGATGCAAAAACATTATTGGCATCTGGAGATTATTGCAACGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR CAA 90 bp | TGGAGAGATCCAAGTTCATTTCCCAAGACACAACATTTTCTCTTCTaGGTCACAGCTAGTTACCACAGTCAGAACAAGACCAGAACTATC | + |
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Preference number: 2 (lower is better) Translates to: WRDPSSFPKTQHFLF*VTASYHSQNKTRTI Trigger: GATAGTTCTGGTCTTGTTCTGACTGTGGTAACTAGCTGTGACCAAGAAGAGAAAATGTTGTGTCTTGGGAAATGAACTTGGATCTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGAGAGATGGAATCCCTTCAGCATCATAGGGCTCACCATTCTCTGTTATTCAATGACAACATCATaGTTTGACATTGTCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: EMERWNPFSIIGLTILCYSMTTS*FDIVSG Trigger: TCCTGAGACAATGTCAAACCATGATGTTGTCATTGA...ATAACAGAGAATGGTGAGCCCTATGATGCTGAAGGGATTCCATCTCTCCATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | ACAATGATAAACTGGGAGATGGAGAGATGGAATCCCTTCAGCATCATAGGGCTCATTTTTGGTGATTGGTaGCATAAAAGTTTCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: TMINWEMERWNPFSIIGLIFGDW*HKSFRV Trigger: CACCCTGAAACTTTTATGCCACCAATCACCAAAAAT...GAGCCCTATGATGCTGAAGGGATTCCATCTCTCCATCTCCCAGTTTATCATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCACGTGGTCCTGAAGTTCTTATTTCTGGCCATCTTCCTTTCGACAACAGATAAAGTAGAAAAGTCATaGCACCAGATCAATTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: SHVVLKFLFLAIFLSTTDKVEKS*HQINSK Trigger: CTTTGAATTGATCTGGTGCCATGACTTTTCTACTTT...ATCTGTTGTCGAAAGGAAGATGGCCAGAAATAAGAACTTCAGGACCACGTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCACGTGGTCCTGAAGTTCTTATTTCTGGCCATCTTCCTTTCGACAACAGATCATTGTACCAATTTGTaGCTAATTTTCAAGCAACTG | + |
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Preference number: 2 (lower is better) Translates to: SHVVLKFLFLAIFLSTTDHCTNL*LIFKQL Trigger: CAGTTGCTTGAAAATTAGCCACAAATTGGTACAATG...ATCTGTTGTCGAAAGGAAGATGGCCAGAAATAAGAACTTCAGGACCACGTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR TCA 90 bp | GACATCAGATTAGAGAGAATGAGTTATGTGCTTGGAGACAAAACTGGTCACAGAGAGCATTGTAGACAGTaGGAATTGAAAGGAATCCTA | + |
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Preference number: 2 (lower is better) Translates to: DIRLERMSYVLGDKTGHREHCRQ*ELKGIL Trigger: TAGGATTCCTTTCAATTCTCACTGTCTACAATGCTC...TCTGTGACCAGTTTTGTCTCCAAGCACATAACTCATTCTCTCTAATCTGATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGGAATATGTCTTCCCCAGTGCAAATATAGAAGTGTGAGTCATACTCCACATTTGCTCATGAGCTACTaGTCAATGACAACATCATGG | + |
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Preference number: 2 (lower is better) Translates to: LGICLPQCKYRSVSHTPHLLMSY*SMTTSW Trigger: CCATGATGTTGTCATTGAGCAGTAGCTCATGAGCAA...ATGTGGAGTATGACTCACACTTCTATATTTGCACTGGGGAAGACATATTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTTTGCTCATGAGCTACTaGTCAATGACAACATCATGG | + |
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Preference number: 2 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFLLMSY*SMTTSW Trigger: CCATGATGTTGTCATTGAGCAGTAGCTCATGAGCAA...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTTGGTCACAGCTAGTTACCACAGTCAGAACAAGACCAGAACTATCTTCGGTGAACATAGTTATTaGTCCATAATTACTTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LFLVTASYHSQNKTRTIFGEHSY*SIITLL Trigger: CAGCAAAGTAATTATGGACCAATAACTATGTTCACC...GAAGATAGTTCTGGTCTTGTTCTGACTGTGGTAACTAGCTGTGACCAAGAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAAGTCACAGAGAATTCATATGTCTTCCCCAGTaGAAATATAGAAGTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SEQVTGQTQSFLISHREFICLPQ*KYRSVS Trigger: ACTCACACTTCTATATTTGCACTGGGGAAGACATAT...GAATTCTCTGTGACTTATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR-3UTR GCA 90 bp | GACATCAGATTAGAGAGAATGAGTTATGTGCTTGGAGACAAAACTGGTCACAGAGAAACTATCCTGTCATaGATTTTAAGCTCACTACGA | + |
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Preference number: 2 (lower is better) Translates to: DIRLERMSYVLGDKTGHRETILS*ILSSLR Trigger: TCGTAGTGAGCTTAAAATGCATGACAGGATAGTTTC...TCTGTGACCAGTTTTGTCTCCAAGCACATAACTCATTCTCTCTAATCTGATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTTACCAGTAACTCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATATCAATGACAACATCATaGTTTGACATTGTCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: DFTSNSEQVTGQTQSFLISMTTS*FDIVSG Trigger: TCCTGAGACAATGTCAAACCATGATGTTGTCATTGA...TATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAGTTACTGGTAAAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCACCATGTTTCATTTTCTaGCAGGGAATTTCCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: FSVICLSNSVSQTYLKDPPCFIF*QGISIQ Trigger: TTGGATGGAAATTCCCTGGCAGAAAATGAAACATGG...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTTACCAGTAACTCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATATTTATTAAAATAGATTaGGGTCAGGGGAGAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: DFTSNSEQVTGQTQSFLIFIKID*GQGRKT Trigger: TGTCTTTCTCCCCTGACCCCAATCTATTTTAATAAA...TATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAGTTACTGGTAAAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCATTTATTAAAATAGATTaGGGTCAGGGGAGAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: FSVICLSNSVSQTYLKDPFIKID*GQGRKT Trigger: TGTCTTTCTCCCCTGACCCCAATCTATTTTAATAAA...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR GCA 72 bp | CACACTGCATCTCCACACACAGCTGCCTCTACCTGGTaGTCCTGCGCACTAGTTGAGAAGATGCCCCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: HTASPHTAASTW*SCALVEKMPQV Trigger: TACCTGGGGCATCTTCTCAACTAGTGCGCAGGAGCACCAGGTAGAGGCAGCTGTGTGTGGAGATGCAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR CCA 72 bp | GAACACACTGCATCTCCACACACAGCTGCCTCTACCTaGTGCTCCTGCGCACTAGTTGAGAAGATGCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: EHTASPHTAAST*CSCALVEKMPQ Trigger: CTGGGGCATCTTCTCAACTAGTGCGCAGGAGCACCAGGTAGAGGCAGCTGTGTGTGGAGATGCAGTGTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR CAA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCACTCAGGACGTCGGACTaGGGTGGGCTCTCCATCACT | + |
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Preference number: 3 (lower is better) Translates to: QVPTEACHSPTHDFTSNSLRTSD*GGLSIT Trigger: AGTGATGGAGAGCCCACCCAAGTCCGACGTCCTGAG...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR GCA 72 bp | TGCCTCTGCCTCCCAATTGCTGGGATTAAAGGCGTGTaGCACCACTGCCCAGCGATACCTGTTACTCTTACA | + |
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Preference number: 3 (lower is better) Translates to: CLCLPIAGIKGV*HHCPAIPVTLT Trigger: TGTAAGAGTAACAGGTATCGCTGGGCAGTGGTGGCACACGCCTTTAATCCCAGCAATTGGGAGGCAGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAAGTCACAGAGAATTCCTCAGGACGTCGGACTaGGGTGGGCTCTCCATCACT | + |
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Preference number: 3 (lower is better) Translates to: SEQVTGQTQSFLISHREFLRTSD*GGLSIT Trigger: AGTGATGGAGAGCCCACCCAAGTCCGACGTCCTGAG...GAATTCTCTGTGACTTATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| 3UTR-3UTR CAA 90 bp | GACATCAGATTAGAGAGAATGAGTTATGTGCTTGGAGACAAAACTGGTCACAGACTCAGGACGTCGGACTaGGGTGGGCTCTCCATCACT | + |
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Preference number: 3 (lower is better) Translates to: DIRLERMSYVLGDKTGHRLRTSD*GGLSIT Trigger: AGTGATGGAGAGCCCACCCAAGTCCGACGTCCTGAG...TCTGTGACCAGTTTTGTCTCCAAGCACATAACTCATTCTCTCTAATCTGATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
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| 3UTR TCA 72 bp | TATGTGCTTGGAGACAAAACTGGTCACAGAGGAGTTTaGGGCACTGAGTTCAGGCTGTGTAAGCATCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: YVLGDKTGHRGV*GTEFRLCKHQP Trigger: TGGTTGATGCTTACACAGCCTGAACTCAGTGCCTCAAACTCCTCTGTGACCAGTTTTGTCTCCAAGCACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR CCA 72 bp | AATTGGACCACAATGATAAACTGGGAGATGGAGAGATaGAATCCCTTCAGCATCATAGGGCTCACCATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: NWTTMINWEMER*NPFSIIGLTIL Trigger: GAGAATGGTGAGCCCTATGATGCTGAAGGGATTCCATCTCTCCATCTCCCAGTTTATCATTGTGGTCCAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR CCA 72 bp | TTTTTCTCTAAGAGAAGAGAGGTACAGAAGAGTGACTaGTTCCCTTCACAGGCGCTTTCAGGTTGTTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: FFSKRREVQKSD*FPSQALSGCSP Trigger: AGGTGAACAACCTGAAAGCGCCTGTGAAGGGAACCAGTCACTCTTCTGTACCTCTCTTCTCTTAGAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGATGGAGAGATGGAATCCCTTCAGCATCATAGGGCTCACCATTCTCTGTTATGCTGATAGAGGTCATTaGGAAGAATTGGATATGACG | + |
|
Preference number: 3 (lower is better) Translates to: EMERWNPFSIIGLTILCYADRGH*EELDMT Trigger: CGTCATATCCAATTCTTCCAAATGACCTCTATCAGC...ATAACAGAGAATGGTGAGCCCTATGATGCTGAAGGGATTCCATCTCTCCATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR CCA 72 bp | CAGAGACATCAGATTAGAGAGAATGAGTTATGTGCTTaGAGACAAAACTGGTCACAGAGGAGTTTGAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QRHQIRENELCA*RQNWSQRSLRH Trigger: GTGCCTCAAACTCCTCTGTGACCAGTTTTGTCTCCAAGCACATAACTCATTCTCTCTAATCTGATGTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCACGTGGTCCTGAAGTTCTTATTTCTGGCCATCTTCCTTTCGACAACAGATATGTTTTTGCATCCTTaGCTAACAATATCCGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SHVVLKFLFLAIFLSTTDMFLHP*LTISDG Trigger: CCCATCGGATATTGTTAGCAAAGGATGCAAAAACAT...ATCTGTTGTCGAAAGGAAGATGGCCAGAAATAAGAACTTCAGGACCACGTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR TCA 72 bp | GATGTTAAAGGTTTGGATCATTTGACTAGGAGCCTTTaGAGGCATTGCCAATCCCAATGGGTGATACTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DVKGLDHLTRSL*RHCQSQWVILA Trigger: AGCTAGTATCACCCATTGGGATTGGCAATGCCTTCAAAGGCTCCTAGTCAAATGATCCAAACCTTTAACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR TCA 72 bp | CTTGTTAAGCTCTGTATATGCAAAGCCACGTGGTCCTaGAGTTCTTATTTCTGGCCATCTTCCTTTCGACAA | + |
|
Preference number: 3 (lower is better) Translates to: LVKLCICKATWS*SSYFWPSSFRQ Trigger: TTGTCGAAAGGAAGATGGCCAGAAATAAGAACTTCAGGACCACGTGGCTTTGCATATACAGAGCTTAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR GCA 72 bp | AAAAATGGCATAATTACACAAGTTCCTACAGAAGCCTaGCATTCACCCACCCACGACTTTACCAGTAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: KNGIITQVPTEA*HSPTHDFTSNS Trigger: TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTGTGTAATTATGCCATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR GCA 72 bp | ATAGATGTAGGAGAGCTCACGACATTCACCAGATTTTaGCATAGCCCTGGTCATTTCTTTTCACTTTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: IDVGELTTFTRF*HSPGHFFSLCF Trigger: GAAGCAAAGTGAAAAGAAATGACCAGGGCTATGGCAAAATCTGGTGAATGTCGTGAGCTCTCCTACATCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR CCA 72 bp | TCCCTTCAGCATCATAGGGCTCACCATTCTCTGTTATaGAAATACTGGTATGACTGGAATCAAAACCGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLQHHRAHHSLL*KYWYDWNQNRK Trigger: TTTCCGGTTTTGATTCCAGTCATACCAGTATTTCCATAACAGAGAATGGTGAGCCCTATGATGCTGAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTACAACTTTGCCTTTTTaGTTTGGAAGGGACTCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFTTLPF*FGRDSG Trigger: TCCCGAGTCCCTTCCAAACAAAAAAGGCAAAGTTGT...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCAACAACTTTGCCTTTTTaGTTTGGAAGGGACTCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FSVICLSNSVSQTYLKDPTTLPF*FGRDSG Trigger: TCCCGAGTCCCTTCCAAACAAAAAAGGCAAAGTTGT...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR TCA 72 bp | TTTTCACTTTGCTTCCAGAAGACAGGTTGCAAAAACTaGCTGTTAGCTTTCTACCCTTATGGCACAGACATT | + |
|
Preference number: 3 (lower is better) Translates to: FSLCFQKTGCKN*LLAFYPYGTDI Trigger: AATGTCTGTGCCATAAGGGTAGAAAGCTAACAGTCAGTTTTTGCAACCTGTCTTCTGGAAGCAAAGTGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR GCA 72 bp | ACTTGTTCAAGCATCTTATTCCCATGTTTCATTTTCTaGCAGGGAATTTCCATCCAAGGTCCTATTCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TCSSILFPCFIF*QGISIQGPILV Trigger: GACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACATGGGAATAAGATGCTTGAACAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR GCA 72 bp | AGGCACATTTTCATATTTACAGGCATCATTGCCCTCTaGTTCATGCTAGTTAGCAATGATGCTCTTCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: RHIFIFTGIIAL*FMLVSNDALQT Trigger: TGTTTGAAGAGCATCATTGCTAACTAGCATGAAGCAGAGGGCAATGATGCCTGTAAATATGAAAATGTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR GCA 72 bp | CAAGCAACTGCTTTCTGTGACAGGTTAGGAGAACGTTaGAATAATCTCCAGATGCCAATAATGTTTTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QATAFCDRLGER*NNLQMPIMFLH Trigger: ATGCAAAAACATTATTGGCATCTGGAGATTATTGCAACGTTCTCCTAACCTGTCACAGAAAGCAGTTGCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR GCA 72 bp | TTCAACAGTAAAACACATTATACATTTCCAGTCAAATaGAGTGACCTCAAAGTGACTGACTGTCCATTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: FNSKTHYTFPVK*SDLKVTDCPFS Trigger: GCTAAATGGACAGTCAGTCACTTTGAGGTCACTGCATTTGACTGGAAATGTATAATGTGTTTTACTGTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR TCA 72 bp | TTATTGGTCCATAATTACTTTGCTGTTATTGACCCATaGACACACCTTCATTTCTGTAATGTCTTCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLVHNYFAVIDP*THLHFCNVFKA Trigger: TGCCTTGAAGACATTACAGAAATGAAGGTGTGTTCATGGGTCAATAACAGCAAAGTAATTATGGACCAATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCAGCCAGCTCCCGTGCTTaGCGTTCATTGACTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVPTEACHSPTHDFTSNSASSRA*RSLTSL Trigger: AAGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGC...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCAGACTTCCCTTTGGTCTaGCAGGTCTGCCTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVPTEACHSPTHDFTSNSDFPLV*QVCLVA Trigger: GGCAACAAGGCAGACCTGCCAGACCAAAGGGAAGTC...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCACTTAAACGCTTTTCCTaGCGCTCCATCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVPTEACHSPTHDFTSNSLKRFS*RSICSL Trigger: CAAGGAGCAGATGGAGCGTCAGGAAAAGCGTTTAAG...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGAGAGATGGAATCCCTTCAGCATCATAGGGCTCACCATTCTCTGTTATGCCAGCTCCCGTGCTTaGCGTTCATTGACTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EMERWNPFSIIGLTILCYASSRA*RSLTSL Trigger: AAGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGC...ATAACAGAGAATGGTGAGCCCTATGATGCTGAAGGGATTCCATCTCTCCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | GACATGTCCGTGGATCTGTCTGACTCAACAGCTGATAGAGGTCATTTGGAAGAAGTGCTTGCCGTTCATTaGCTTCCCTTTGGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DMSVDLSDSTADRGHLEEVLAVH*LPFGLA Trigger: TGCCAGACCAAAGGGAAGTCAATGAACGGCAAGCAC...TTCTTCCAAATGACCTCTATCAGCTGTTGAGTCAGACAGATCCACGGACATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | AGCCACGTGGTCCTGAAGTTCTTATTTCTGGCCATCTTCCTTTCGACAACAGATCTTAAACGCTTTTCCTaGCGCTCCATCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SHVVLKFLFLAIFLSTTDLKRFS*RSICSL Trigger: CAAGGAGCAGATGGAGCGTCAGGAAAAGCGTTTAAG...ATCTGTTGTCGAAAGGAAGATGGCCAGAAATAAGAACTTCAGGACCACGTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCAAGCTCTGTTGACTGGTaGGGTCAAACATCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVPTEACHSPTHDFTSNSSSVDW*GQTSVR Trigger: TCTTACTGATGTTTGACCTCACCAGTCAACAGAGCT...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCATTCAAGAAGCTCTGTTaGCTGGTGAGGTCAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: QVPTEACHSPTHDFTSNSFKKLC*LVRSNI Trigger: GATGTTTGACCTCACCAGTCAACAGAGCTTCTTGAA...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTGGTCACAGCTAGTTACCACAGTCAGAACAAGACCAGAACTATCTTCTTCAGCCAGCTCCCGTaGTTGCCGTTCATTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLVTASYHSQNKTRTIFFSQLP*LPFIDF Trigger: GAAGTCAATGAACGGCAAGCACGGGAGCTGGCTGAA...GAAGATAGTTCTGGTCTTGTTCTGACTGTGGTAACTAGCTGTGACCAAGAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR CCA 90 bp | GACATCAGATTAGAGAGAATGAGTTATGTGCTTGGAGACAAAACTGGTCACAGAGACTTCCCTTTGGTCTaGCAGGTCTGCCTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DIRLERMSYVLGDKTGHRDFPLV*QVCLVA Trigger: GGCAACAAGGCAGACCTGCCAGACCAAAGGGAAGTC...TCTGTGACCAGTTTTGTCTCCAAGCACATAACTCATTCTCTCTAATCTGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| 3UTR CAA 72 bp | CAGATGAACTGGCTTCTGAGAGACCTACTAAGAATCTaGAAAGACCATGTCAGCCGAGGGGTGATAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QMNWLLRDLLRI*KDHVSRGVIAV Trigger: TACAGCTATCACCCCTCGGCTGACATGGTCTTTCAAGATTCTTAGTAGGTCTCTCAGAAGCCAGTTCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTGGTCACAGCTAGTTACCACAGTCAGAACAAGACCAGAACTATCTTCGCAGTGTCCCAAAGCTaGAGATGTACCTTAAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLVTASYHSQNKTRTIFAVSQS*RCTLNA Trigger: AGCGTTTAAGGTACATCTGCAGCTTTGGGACACTGC...GAAGATAGTTCTGGTCTTGTTCTGACTGTGGTAACTAGCTGTGACCAAGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTGCCAGCTCCCGTGCTTaGCGTTCATTGACTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFASSRA*RSLTSL Trigger: AAGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGC...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAAGTCACAGAGAATTCTTCAGCCAGCTCCCGTaGTTGCCGTTCATTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SEQVTGQTQSFLISHREFFSQLP*LPFIDF Trigger: GAAGTCAATGAACGGCAAGCACGGGAGCTGGCTGAA...GAATTCTCTGTGACTTATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CCA 90 bp | TTAGGAATATGTCTTCCCCAGTGCAAATATAGAAGTGTGAGTCATACTCCACATGACTTCCCTTTGGTCTaGCAGGTCTGCCTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGICLPQCKYRSVSHTPHDFPLV*QVCLVA Trigger: GGCAACAAGGCAGACCTGCCAGACCAAAGGGAAGTC...ATGTGGAGTATGACTCACACTTCTATATTTGCACTGGGGAAGACATATTCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTGTGCTTGCCGTTCATTaGCTTCCCTTTGGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFVLAVH*LPFGLA Trigger: TGCCAGACCAAAGGGAAGTCAATGAACGGCAAGCAC...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | GACATGTCCGTGGATCTGTCTGACTCAACAGCTGATAGAGGTCATTTGGAAGAATTCACAGTAAGCATTTaGCTGCAGTTGACTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: DMSVDLSDSTADRGHLEEFTVSI*LQLTHP Trigger: TGGATGAGTCAACTGCAGGCAAATGCTTACTGTGAA...TTCTTCCAAATGACCTCTATCAGCTGTTGAGTCAGACAGATCCACGGACATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAAGTCACAGAGAATTCTCATTGACTTCCCTTTaGTCTGGCAGGTCTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SEQVTGQTQSFLISHREFSLTSL*SGRSAL Trigger: CAAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGA...GAATTCTCTGTGACTTATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCAGCTTGTTTCGAAGTATaGTATGCCATATTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVPTEACHSPTHDFTSNSACFEV*YAIFFS Trigger: GCTGAAAAATATGGCATACCATACTTCGAAACAAGC...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR CAA 72 bp | TTCTCACATCTACTATTCAGAGGCCCTGCATCTTCCTaGCCCATCTCCAGACATTTTAGAGAGTTACTACAC | + |
|
Preference number: 4 (lower is better) Translates to: FSHLLFRGPASS*PISRHFRELLH Trigger: GTGTAGTAACTCTCTAAAATGTCTGGAGATGGGCAAGGAAGATGCAGGGCCTCTGAATAGTAGATGTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGAATATGTCTTCCCCAGTGCAAATATAGAAGTGTGAGTCATACTCCACATCTTAAACGCTTTTCCTaGCGCTCCATCTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGICLPQCKYRSVSHTPHLKRFS*RSICSL Trigger: CAAGGAGCAGATGGAGCGTCAGGAAAAGCGTTTAAG...ATGTGGAGTATGACTCACACTTCTATATTTGCACTGGGGAAGACATATTCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCAGTGCTTGCCGTTCATTaGCTTCCCTTTGGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSVICLSNSVSQTYLKDPVLAVH*LPFGLA Trigger: TGCCAGACCAAAGGGAAGTCAATGAACGGCAAGCAC...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTACCAGTAACTCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAGCAGTGTCCCAAAGCTaGAGATGTACCTTAAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: DFTSNSEQVTGQTQSFLIAVSQS*RCTLNA Trigger: AGCGTTTAAGGTACATCTGCAGCTTTGGGACACTGC...TATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAGTTACTGGTAAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCATTCAGCCAGCTCCCGTaGTTGCCGTTCATTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVICLSNSVSQTYLKDPFSQLP*LPFIDF Trigger: GAAGTCAATGAACGGCAAGCACGGGAGCTGGCTGAA...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR CAA 72 bp | CCAAGTTCATTTCCCAAGACACAACATTTTCTCTTCTaGGTCACAGCTAGTTACCACAGTCAGAACAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PSSFPKTQHFLF*VTASYHSQNKT Trigger: GGTCTTGTTCTGACTGTGGTAACTAGCTGTGACCAAGAAGAGAAAATGTTGTGTCTTGGGAAATGAACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | GACATCAGATTAGAGAGAATGAGTTATGTGCTTGGAGACAAAACTGGTCACAGATTCAAGAAGCTCTGTTaGCTGGTGAGGTCAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: DIRLERMSYVLGDKTGHRFKKLC*LVRSNI Trigger: GATGTTTGACCTCACCAGTCAACAGAGCTTCTTGAA...TCTGTGACCAGTTTTGTCTCCAAGCACATAACTCATTCTCTCTAATCTGATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTGCATTTGCCTGCAGTTaGCTCATCCAGTTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFAFACS*LIQFLT Trigger: TGTCAGAAACTGGATGAGTCAACTGCAGGCAAATGC...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGAATATGTCTTCCCCAGTGCAAATATAGAAGTGTGAGTCATACTCCACATGCATTTGCCTGCAGTTaGCTCATCCAGTTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGICLPQCKYRSVSHTPHAFACS*LIQFLT Trigger: TGTCAGAAACTGGATGAGTCAACTGCAGGCAAATGC...ATGTGGAGTATGACTCACACTTCTATATTTGCACTGGGGAAGACATATTCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAATATGTCTTCCCCAGTGCAAATATAGAAGTGTGAGTCATACTCCACATGCAGTGTCCCAAAGCTaGAGATGTACCTTAAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGICLPQCKYRSVSHTPHAVSQS*RCTLNA Trigger: AGCGTTTAAGGTACATCTGCAGCTTTGGGACACTGC...ATGTGGAGTATGACTCACACTTCTATATTTGCACTGGGGAAGACATATTCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCATCATTGACTTCCCTTTaGTCTGGCAGGTCTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVICLSNSVSQTYLKDPSLTSL*SGRSAL Trigger: CAAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGA...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTAGCTCTGTTGACTGGTaGGGTCAAACATCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFSSVDW*GQTSVR Trigger: TCTTACTGATGTTTGACCTCACCAGTCAACAGAGCT...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTCTTGGTCACAGCTAGTTACCACAGTCAGAACAAGACCAGAACTATCTTCTTTCCATTCTCTTCATaGTTAAGTCCAGAAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLVTASYHSQNKTRTIFFPFSS*LSPEAF Trigger: AAACGCTTCTGGACTTAATCATGAAGAGAATGGAAA...GAAGATAGTTCTGGTCTTGTTCTGACTGTGGTAACTAGCTGTGACCAAGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAAGTCACAGAGAATTCTTCACAGTAAGCATTTaGCTGCAGTTGACTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEQVTGQTQSFLISHREFFTVSI*LQLTHP Trigger: TGGATGAGTCAACTGCAGGCAAATGCTTACTGTGAA...GAATTCTCTGTGACTTATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTACCAGTAACTCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAGCAGGTCTGCCTTGTTaGCAATTAATACTATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DFTSNSEQVTGQTQSFLIAGLPC*QLILCL Trigger: CAGACATAGTATTAATTGGCAACAAGGCAGACCTGC...TATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAGTTACTGGTAAAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAAGTCACAGAGAATTCGCAGGTCTGCCTTGTTaGCAATTAATACTATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEQVTGQTQSFLISHREFAGLPC*QLILCL Trigger: CAGACATAGTATTAATTGGCAACAAGGCAGACCTGC...GAATTCTCTGTGACTTATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTGACTCATCCAGTTTCTaGCATTCAAGAAGCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFDSSSF*HSRSSV Trigger: AACAGAGCTTCTTGAATGTCAGAAACTGGATGAGTC...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAATATGTCTTCCCCAGTGCAAATATAGAAGTGTGAGTCATACTCCACATGCAGGTCTGCCTTGTTaGCAATTAATACTATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGICLPQCKYRSVSHTPHAGLPC*QLILCL Trigger: CAGACATAGTATTAATTGGCAACAAGGCAGACCTGC...ATGTGGAGTATGACTCACACTTCTATATTTGCACTGGGGAAGACATATTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR CAA 72 bp | GTGGATCTGTCTGACTCAACAGCTGATAGAGGTCATTaGGAAGAATTGGATATGACGCTAGATTTTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VDLSDSTADRGH*EELDMTLDFTL Trigger: CAAAGTAAAATCTAGCGTCATATCCAATTCTTCCAAATGACCTCTATCAGCTGTTGAGTCAGACAGATCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAAGTCACAGAGAATTCTTTCCATTCTCTTCATaGTTAAGTCCAGAAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEQVTGQTQSFLISHREFFPFSS*LSPEAF Trigger: AAACGCTTCTGGACTTAATCATGAAGAGAATGGAAA...GAATTCTCTGTGACTTATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR TCA 90 bp | GACTTTACCAGTAACTCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATATTTCCATTCTCTTCATaGTTAAGTCCAGAAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DFTSNSEQVTGQTQSFLIFPFSS*LSPEAF Trigger: AAACGCTTCTGGACTTAATCATGAAGAGAATGGAAA...TATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAGTTACTGGTAAAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTACCAGTAACTCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATATTTCGAAGTATGGTATaGCATATTTTTCAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DFTSNSEQVTGQTQSFLIFRSMV*HIFQPA Trigger: AGCTGGCTGAAAAATATGGCATACCATACTTCGAAA...TATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAGTTACTGGTAAAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR CAA 72 bp | AATAATCTCCAGATGCCAATAATGTTTTTGCATCCTTaGCTAACAATATCCGATGGGTTCAGCCATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: NNLQMPIMFLHP*LTISDGFSHTT Trigger: AGTGGTATGGCTGAACCCATCGGATATTGTTAGCAAAGGATGCAAAAACATTATTGGCATCTGGAGATTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAATATGTCTTCCCCAGTGCAAATATAGAAGTGTGAGTCATACTCCACATTTTCGAAGTATGGTATaGCATATTTTTCAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGICLPQCKYRSVSHTPHFRSMV*HIFQPA Trigger: AGCTGGCTGAAAAATATGGCATACCATACTTCGAAA...ATGTGGAGTATGACTCACACTTCTATATTTGCACTGGGGAAGACATATTCCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCAGCTTGTTTCGAAGTATaGTATGCCATATTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVICLSNSVSQTYLKDPACFEV*YAIFFS Trigger: GCTGAAAAATATGGCATACCATACTTCGAAACAAGC...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR CAA 72 bp | TTTCAGGGTGAACATAGTTATTGGTCCATAATTACTTaGCTGTTATTGACCCATGAACACACCTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQGEHSYWSIIT*LLLTHEHTFIS Trigger: AGAAATGAAGGTGTGTTCATGGGTCAATAACAGCAAAGTAATTATGGACCAATAACTATGTTCACCCTGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| 3UTR CAA 72 bp | CTCTCAGACTTATCTCAAAGATCCATTTCATCTAACTaGTTCAAGCATCTTATTCCCATGTTTCATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSDLSQRSISSN*FKHLIPMFHFL Trigger: CAGAAAATGAAACATGGGAATAAGATGCTTGAACAAGTTAGATGAAATGGATCTTTGAGATAAGTCTGAGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | AGCCACGTGGTCCTGAAGTTCTTATTTCTGGCCATCTTCCTTTCGACAACAGATAGCCAGCTCCCGTGCTaGCCGTTCATTGACTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SHVVLKFLFLAIFLSTTDSQLPC*PFIDFP Trigger: AGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGCT...ATCTGTTGTCGAAAGGAAGATGGCCAGAAATAAGAACTTCAGGACCACGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS GCA 90 bp | GTTTCGAAGTATGGTATGCCATATTTTTCAGCCAGCTCCCGTGCTTaGCGTTCATTGACTTCCCTTTGGTCTGGCAGGTCTGCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSKYGMPYFSASSRA*RSLTSLWSGRSALL Trigger: CAACAAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGCTGAAAAATATGGCATACCATACTTCGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS GCA 90 bp | GCTTGTTTCGAAGTATGGTATGCCATATTTTTCAGCCAGCTCCCGTaGTTGCCGTTCATTGACTTCCCTTTGGTCTGGCAGGTCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ACFEVWYAIFFSQLP*LPFIDFPLVWQVCL Trigger: AAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGCTGAAAAATATGGCATACCATACTTCGAAACAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCATTCATTGACTTCCCTTaGGTCTGGCAGGTCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVPTEACHSPTHDFTSNSFIDFP*VWQVCL Trigger: AAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGAA...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS TCA 90 bp | TCCAGCAGTGTCCCAAAGCTGCAGATGTACCTTAAACGCTTTTCCTaGCGCTCCATCTGCTCCTTGTGTGTCATAAACCACACGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSVPKLQMYLKRFS*RSICSLCVINHTFF Trigger: GAAAAACGTGTGGTTTATGACACACAAGGAGCAGATGGAGCGTCAGGAAAAGCGTTTAAGGTACATCTGCAGCTTTGGGACACTGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS TCA 90 bp | ATGGTATGCCATATTTTTCAGCCAGCTCCCGTGCTTGCCGTTCATTaGCTTCCCTTTGGTCTGGCAGGTCTGCCTTGTTGCCAATTAATA | + |
|
Preference number: 5 (lower is better) Translates to: MVCHIFQPAPVLAVH*LPFGLAGLPCCQLI Trigger: TATTAATTGGCAACAAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGCTGAAAAATATGGCATACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCATTTCACAGTAAGCATTaGCCTGCAGTTGACTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: QVPTEACHSPTHDFTSNSFHSKH*PAVDSS Trigger: GGATGAGTCAACTGCAGGCAAATGCTTACTGTGAAA...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTTCCTACAGAAGCCTGCCATTCACCCACCCACGACTTTACCAGTAACTCAGGCAGGTCTGCCTTGTaGCCAATTAATACTATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QVPTEACHSPTHDFTSNSGRSAL*PINTMS Trigger: AGACATAGTATTAATTGGCAACAAGGCAGACCTGCC...TGAGTTACTGGTAAAGTCGTGGGTGGGTGAATGGCAGGCTTCTGTAGGAACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | ACAATGATAAACTGGGAGATGGAGAGATGGAATCCCTTCAGCATCATAGGGCTCCCAGAATTTCCTCCATaGACAGTGTCCGGAACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TMINWEMERWNPFSIIGLPEFPP*TVSGTC Trigger: ACAGGTTCCGGACACTGTCAATGGAGGAAATTCTGG...GAGCCCTATGATGCTGAAGGGATTCCATCTCTCCATCTCCCAGTTTATCATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTCTTGGTCACAGCTAGTTACCACAGTCAGAACAAGACCAGAACTATCTTCTTCATTGACTTCCCTTaGGTCTGGCAGGTCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFLVTASYHSQNKTRTIFFIDFP*VWQVCL Trigger: AAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGAA...GAAGATAGTTCTGGTCTTGTTCTGACTGTGGTAACTAGCTGTGACCAAGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAAGTCACAGAGAATTCCGTGCTTGCCGTTCATaGACTTCCCTTTGGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SEQVTGQTQSFLISHREFRACRS*TSLWSG Trigger: GCCAGACCAAAGGGAAGTCAATGAACGGCAAGCACG...GAATTCTCTGTGACTTATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | GACTTTACCAGTAACTCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATACGTGCTTGCCGTTCATaGACTTCCCTTTGGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DFTSNSEQVTGQTQSFLIRACRS*TSLWSG Trigger: GCCAGACCAAAGGGAAGTCAATGAACGGCAAGCACG...TATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAGTTACTGGTAAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | GACATCAGATTAGAGAGAATGAGTTATGTGCTTGGAGACAAAACTGGTCACAGACGTGCTTGCCGTTCATaGACTTCCCTTTGGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DIRLERMSYVLGDKTGHRRACRS*TSLWSG Trigger: GCCAGACCAAAGGGAAGTCAATGAACGGCAAGCACG...TCTGTGACCAGTTTTGTCTCCAAGCACATAACTCATTCTCTCTAATCTGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCAAGCCAGCTCCCGTGCTaGCCGTTCATTGACTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSVICLSNSVSQTYLKDPSQLPC*PFIDFP Trigger: AGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGCT...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | GACTTTACCAGTAACTCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATACCAGAATTTCCTCCATaGACAGTGTCCGGAACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DFTSNSEQVTGQTQSFLIPEFPP*TVSGTC Trigger: ACAGGTTCCGGACACTGTCAATGGAGGAAATTCTGG...TATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAGTTACTGGTAAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS TCA 90 bp | TGTCCGGAACCTGTGTCTTCTCTACACACTTTTCCATTCTCTTCATaGTTAAGTCCAGAAGCGTTTCCACTGACTTCTCTACATTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CPEPVSSLHTFPFSS*LSPEAFPLTSLHSV Trigger: GACAGAATGTAGAGAAGTCAGTGGAAACGCTTCTGGACTTAATCATGAAGAGAATGGAAAAGTGTGTAGAGAAGACACAGGTTCCGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTTTCATTGACTTCCCTTaGGTCTGGCAGGTCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFFIDFP*VWQVCL Trigger: AAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGAA...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTAGCATTTGCCTGCAGTaGACTCATCCAGTTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFSICLQ*THPVSD Trigger: GTCAGAAACTGGATGAGTCAACTGCAGGCAAATGCT...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | TTAGGAATATGTCTTCCCCAGTGCAAATATAGAAGTGTGAGTCATACTCCACATAGCATTTGCCTGCAGTaGACTCATCCAGTTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LGICLPQCKYRSVSHTPHSICLQ*THPVSD Trigger: GTCAGAAACTGGATGAGTCAACTGCAGGCAAATGCT...ATGTGGAGTATGACTCACACTTCTATATTTGCACTGGGGAAGACATATTCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | GACTTTACCAGTAACTCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATATTTCACAGTAAGCATTaGCCTGCAGTTGACTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: DFTSNSEQVTGQTQSFLIFHSKH*PAVDSS Trigger: GGATGAGTCAACTGCAGGCAAATGCTTACTGTGAAA...TATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAGTTACTGGTAAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAAGTCACAGAGAATTCGGCAGGTCTGCCTTGTaGCCAATTAATACTATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEQVTGQTQSFLISHREFGRSAL*PINTMS Trigger: AGACATAGTATTAATTGGCAACAAGGCAGACCTGCC...GAATTCTCTGTGACTTATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCACCAGAATTTCCTCCATaGACAGTGTCCGGAACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSVICLSNSVSQTYLKDPPEFPP*TVSGTC Trigger: ACAGGTTCCGGACACTGTCAATGGAGGAAATTCTGG...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
||
| CDS-3UTR CAA 90 bp | GACTTTACCAGTAACTCAGAACAGGTTACTGGGCAGACACAGTCATTCTTAATAATTCAAGAAGCTCTGTaGACTGGTGAGGTCAAACAT | + |
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Preference number: 5 (lower is better) Translates to: DFTSNSEQVTGQTQSFLIIQEAL*TGEVKH Trigger: ATGTTTGACCTCACCAGTCAACAGAGCTTCTTGAAT...TATTAAGAATGACTGTGTCTGCCCAGTAACCTGTTCTGAGTTACTGGTAAAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS-3UTR CAA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCAAGCATTTGCCTGCAGTaGACTCATCCAGTTTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: FSVICLSNSVSQTYLKDPSICLQ*THPVSD Trigger: GTCAGAAACTGGATGAGTCAACTGCAGGCAAATGCT...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS-3UTR CAA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTTTTCACAGTAAGCATTaGCCTGCAGTTGACTCATCC | + |
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Preference number: 5 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFFHSKH*PAVDSS Trigger: GGATGAGTCAACTGCAGGCAAATGCTTACTGTGAAA...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS-3UTR CAA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTGGCAGGTCTGCCTTGTaGCCAATTAATACTATGTCT | + |
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Preference number: 5 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFGRSAL*PINTMS Trigger: AGACATAGTATTAATTGGCAACAAGGCAGACCTGCC...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS-3UTR CAA 90 bp | ATGTTTCATTTTCTGCCAGGGAATTTCCATCCAAGGTCCTATTCTTGTCTCTTTTCTGGCAGGTCTGCCTaGTTGCCAATTAATACTATG | + |
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Preference number: 5 (lower is better) Translates to: MFHFLPGNFHPRSYSCLFSGRSA*LPINTM Trigger: CATAGTATTAATTGGCAACAAGGCAGACCTGCCAGA...AAAGAGACAAGAATAGGACCTTGGATGGAAATTCCCTGGCAGAAAATGAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS-3UTR CAA 90 bp | TTAGGAATATGTCTTCCCCAGTGCAAATATAGAAGTGTGAGTCATACTCCACATATTCAAGAAGCTCTGTaGACTGGTGAGGTCAAACAT | + |
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Preference number: 5 (lower is better) Translates to: LGICLPQCKYRSVSHTPHIQEAL*TGEVKH Trigger: ATGTTTGACCTCACCAGTCAACAGAGCTTCTTGAAT...ATGTGGAGTATGACTCACACTTCTATATTTGCACTGGGGAAGACATATTCCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS-3UTR CAA 90 bp | TTCAGTGTCATTTGTCTAAGTAACTCTGTCTCTCAGACTTATCTCAAAGATCCATCTGGCAGGTCTGCCTaGTTGCCAATTAATACTATG | + |
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Preference number: 5 (lower is better) Translates to: FSVICLSNSVSQTYLKDPSGRSA*LPINTM Trigger: CATAGTATTAATTGGCAACAAGGCAGACCTGCCAGA...TGGATCTTTGAGATAAGTCTGAGAGACAGAGTTACTTAGACAAATGACACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS CAA 72 bp | GTATGGTATGCCATATTTTTCAGCCAGCTCCCGTGCTaGCCGTTCATTGACTTCCCTTTGGTCTGGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VWYAIFFSQLPC*PFIDFPLVWQV Trigger: GACCTGCCAGACCAAAGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGCTGAAAAATATGGCATACCATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS GCA 72 bp | TATGGTATGCCATATTTTTCAGCCAGCTCCCGTGCTTaGCGTTCATTGACTTCCCTTTGGTCTGGCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: YGMPYFSASSRA*RSLTSLWSGRS Trigger: AGACCTGCCAGACCAAAGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGCTGAAAAATATGGCATACCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS CAA 90 bp | TGTTTCGAAGTATGGTATGCCATATTTTTCAGCCAGCTCCCGTGCTaGCCGTTCATTGACTTCCCTTTGGTCTGGCAGGTCTGCCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: CFEVWYAIFFSQLPC*PFIDFPLVWQVCLV Trigger: AACAAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGCTGAAAAATATGGCATACCATACTTCGAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS TCA 72 bp | GTCCCAAAGCTGCAGATGTACCTTAAACGCTTTTCCTaGCGCTCCATCTGCTCCTTGTGTGTCATAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: VPKLQMYLKRFS*RSICSLCVINH Trigger: GTGGTTTATGACACACAAGGAGCAGATGGAGCGTCAGGAAAAGCGTTTAAGGTACATCTGCAGCTTTGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS CAA 90 bp | TATGGTATGCCATATTTTTCAGCCAGCTCCCGTGCTTGCCGTTCATaGACTTCCCTTTGGTCTGGCAGGTCTGCCTTGTTGCCAATTAAT | + |
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Preference number: 6 (lower is better) Translates to: YGMPYFSASSRACRS*TSLWSGRSALLPIN Trigger: ATTAATTGGCAACAAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGAACGGCAAGCACGGGAGCTGGCTGAAAAATATGGCATACCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS CCA 72 bp | TACATTCTGTCCTGTAGCTGCGCTTGTTTCGAAGTATaGTATGCCATATTTTTCAGCCAGCTCCCGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: YILSCSCACFEV*YAIFFSQLPCL Trigger: CAAGCACGGGAGCTGGCTGAAAAATATGGCATACCATACTTCGAAACAAGCGCAGCTACAGGACAGAATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS CAA 72 bp | CGTTCATTGACTTCCCTTTGGTCTGGCAGGTCTGCCTaGTTGCCAATTAATACTATGTCTGGGTTTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: RSLTSLWSGRSA*LPINTMSGFSQ Trigger: CTGTGAAAACCCAGACATAGTATTAATTGGCAACAAGGCAGACCTGCCAGACCAAAGGGAAGTCAATGAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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| CDS TCA 72 bp | CCTGTGTCTTCTCTACACACTTTTCCATTCTCTTCATaGTTAAGTCCAGAAGCGTTTCCACTGACTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: PVSSLHTFPFSS*LSPEAFPLTSL Trigger: TAGAGAAGTCAGTGGAAACGCTTCTGGACTTAATCATGAAGAGAATGGAAAAGTGTGTAGAGAAGACACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069749.9 ENSMUST00000117692.8 ENSMUST00000121693.8 |
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