Pregenerated sensors for RAB27A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032202Ensembl transcript IDs: ENSMUST00000034722.5, ENSMUST00000184146.8
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGGCACCTGGCATAGGAGGGGCTGTTTGCTCATCTCATCGAGCTaGCGGCTTGGTCTCTACAGCGGAGCTGGCGGCAACCAGGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: RGTWHRRGCLLISSS*RLGLYSGAGGNQGS Trigger: TGACCCCTGGTTGCCGCCAGCTCCGCTGTAGAGACCAAGCCGGCAGCTCGATGAGATGAGCAAACAGCCCCTCCTATGCCAGGTGCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR GCA 90 bp | AGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCTGAGTaGTGGGATGAAAGGCATGGGCCTCCACTGCCTAGTGTGTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: RLASNSEIHLPLPPE*WDERHGPPLPSVCL Trigger: CAAACACACACTAGGCAGTGGAGGCCCATGCCTTTCATCCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR CCA 90 bp | TCCGATTCATGGACTAAATCATACAAAGCTGCAGCGCGTTACAGATaGATGCCCGAGGTGACCCTCCTGGAGGCGAGGAGAGGCACCTGG | + |
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Preference number: 1 (lower is better) Translates to: SDSWTKSYKAAARYR*MPEVTLLEARRGTW Trigger: CCAGGTGCCTCTCCTCGCCTCCAGGAGGGTCACCTCGGGCATCCATCTGTAACGCGCTGCAGCTTTGTATGATTTAGTCCATGAATCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR TCA 90 bp | GTATGCTCCACTGAAGTCTTAGAACAACGCTGGAAGGCACGGCTATaGTGGGCCTCATGTCCTGGGTATATAGGATTCAGATGTATAGGC | + |
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Preference number: 1 (lower is better) Translates to: VCSTEVLEQRWKARL*WASCPGYIGFRCIG Trigger: GCCTATACATCTGAATCCTATATACCCAGGACATGAGGCCCATCATAGCCGTGCCTTCCAGCGTTGTTCTAAGACTTCAGTGGAGCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR TCA 90 bp | GGGAAAAGTCAGATTGGCAGTCTCCAGACAAGTGAAAGCAGATCCTaGGGTGCCAGACCAAACATACGTACATATGAAGAGACCATACAT | + |
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Preference number: 1 (lower is better) Translates to: GKSQIGSLQTSESRS*GARPNIRTYEETIH Trigger: ATGTATGGTCTCTTCATATGTACGTATGTTTGGTCTGGCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTGCCAATCTGACTTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR CCA 90 bp | GGATCCCTAAATGACCCGCCACCGTGGGCTTTTATAAGACACTTTTaGCTCTGTGAAGTATTTCTTCCGATTCATGGACTAAATCATACA | + |
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Preference number: 1 (lower is better) Translates to: GSLNDPPPWAFIRHF*LCEVFLPIHGLNHT Trigger: TGTATGATTTAGTCCATGAATCGGAAGAAATACTTCACAGAGCCAAAAGTGTCTTATAAAAGCCCACGGTGGCGGGTCATTTAGGGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR CCA 90 bp | TTCACGTGTTTGAGAGTGATAGTCTACAGTATGGATTTTGAAATCTaGATTCTCAAGACCGTGCTAGCTTTTCCTTGCTCAAAGATCTTA | + |
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Preference number: 1 (lower is better) Translates to: FTCLRVIVYSMDFEI*ILKTVLAFPCSKIL Trigger: TAAGATCTTTGAGCAAGGAAAAGCTAGCACGGTCTTGAGAATCCAGATTTCAAAATCCATACTGTAGACTATCACTCTCAAACACGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR TCA 90 bp | CATGTCAAAGGAAAGGCTATGTTAAAAAGCAATGCTGAAAGACATTaGTCTGTGTGTACACACTTATTGACATTCACGTGTTTGAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: HVKGKAMLKSNAERH*SVCTHLLTFTCLRV Trigger: CACTCTCAAACACGTGAATGTCAATAAGTGTGTACACACAGATCAATGTCTTTCAGCATTGCTTTTTAACATAGCCTTTCCTTTGACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR TCA 90 bp | TGTTTATGCTCATGTCAAAGGAAAGGCTATGTTAAAAAGCAATGCTaGAAGACATTGATCTGTGTGTACACACTTATTGACATTCACGTG | + |
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Preference number: 1 (lower is better) Translates to: CLCSCQRKGYVKKQC*KTLICVYTLIDIHV Trigger: CACGTGAATGTCAATAAGTGTGTACACACAGATCAATGTCTTTCAGCATTGCTTTTTAACATAGCCTTTCCTTTGACATGAGCATAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGGGGGTCATGCGCTGCTaGCACGGGGCTCGCTTGGCG | + |
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Preference number: 2 (lower is better) Translates to: PVKATGYKTLLLNWPTNVGVMRC*HGARLA Trigger: CGCCAAGCGAGCCCCGTGGCAGCAGCGCATGACCCC...CACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGATCTTAATGTCTTCAATGAGACTCTAGGGCTGTCCTGTGTTGAGGCAGGCGATGGATGCCCGAGGTaGCCCTCCTGGAGGCGAGGA | + |
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Preference number: 2 (lower is better) Translates to: KDLNVFNETLGLSCVEAGDGCPR*PSWRRG Trigger: TCCTCGCCTCCAGGAGGGTCACCTCGGGCATCCATC...GCCTGCCTCAACACAGGACAGCCCTAGAGTCTCATTGAAGACATTAAGATCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGCAGTCTCCAGACAAGTGAAAGCAGATCCTGAGGTGCCAGACCAAACATACGCGAGGAGAGGCACCTaGCATAGGAGGGGCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LAVSRQVKADPEVPDQTYARRGT*HRRGCL Trigger: CAAACAGCCCCTCCTATGCCAGGTGCCTCTCCTCGC...GTATGTTTGGTCTGGCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTCTCTTAAACTGGCCCACAAATGTGACTGCTTAAATACAGACAGTGAACTCGGGGTCATGCGCTGCTaGCACGGGGCTCGCTTGGCG | + |
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Preference number: 2 (lower is better) Translates to: TSLKLAHKCDCLNTDSELGVMRC*HGARLA Trigger: CGCCAAGCGAGCCCCGTGGCAGCAGCGCATGACCCC...GAGTTCACTGTCTGTATTTAAGCAGTCACATTTGTGGGCCAGTTTAAGAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGCTTCTCAAGTATGGGAGATGAAAAGAACGAACCACCAATACCTGTCTGCGAGGAGAGGCACCTaGCATAGGAGGGGCTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: ASASQVWEMKRTNHQYLSARRGT*HRRGCL Trigger: CAAACAGCCCCTCCTATGCCAGGTGCCTCTCCTCGC...AGACAGGTATTGGTGGTTCGTTCTTTTCATCTCCCATACTTGAGAAGCAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTCTCTTAAACTGGCCCACAAATGTGACTGCTTAAATACAGACAGTGAACTCGATGGATGCCCGAGGTaGCCCTCCTGGAGGCGAGGA | + |
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Preference number: 2 (lower is better) Translates to: TSLKLAHKCDCLNTDSELDGCPR*PSWRRG Trigger: TCCTCGCCTCCAGGAGGGTCACCTCGGGCATCCATC...GAGTTCACTGTCTGTATTTAAGCAGTCACATTTGTGGGCCAGTTTAAGAGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR CAA 90 bp | ACTGGGAAACACCACCACCACCAAAACTTGATGGGAAAAGTCAGATaGGCAGTCTCCAGACAAGTGAAAGCAGATCCTGAGGTGCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: TGKHHHHQNLMGKVR*AVSRQVKADPEVPD Trigger: GTCTGGCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTGCCAATCTGACTTTTCCCATCAAGTTTTGGTGGTGGTGGTGTTTCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTGCTTCTCAAGTATGGGAGATGAAAAGAACGAACCACCAATACCTGTCTGCCGCCATCTGTTTATaGTCATGTCAAAGGAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: ASASQVWEMKRTNHQYLSAAICL*SCQRKG Trigger: GCCTTTCCTTTGACATGAGCATAAACAGATGGCGGC...AGACAGGTATTGGTGGTTCGTTCTTTTCATCTCCCATACTTGAGAAGCAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGCAGTCTCCAGACAAGTGAAAGCAGATCCTGAGGTGCCAGACCAAACATACACACTTTTGGCTCTGTaGAGTATTTCTTCCGATTCA | + |
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Preference number: 2 (lower is better) Translates to: LAVSRQVKADPEVPDQTYTLLAL*SISSDS Trigger: TGAATCGGAAGAAATACTTCACAGAGCCAAAAGTGT...GTATGTTTGGTCTGGCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGACTGCAGTGAAAGCAGATCCTaGGGTGCCAGACCAAACATA | + |
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Preference number: 2 (lower is better) Translates to: ESYRLQNTSLKLAHKCDCSESRS*GARPNI Trigger: TATGTTTGGTCTGGCACCTCAGGATCTGCTTTCACT...GCAGTCACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAACAGTCTCCAGACAAGTaGAAGCAGATCCTGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQQSPDK*KQILRC Trigger: GCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTG...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGACTGCGAACCCAACAGACCATaGATAGACACAAGAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ESYRLQNTSLKLAHKCDCEPNRP*IDTRVF Trigger: GAAGACTCTTGTGTCTATCCATGGTCTGTTGGGTTC...GCAGTCACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGCCTCAATGATGAGTTTGGTGTTTCAAAGAGTCCCTTATTTCAAAAACAGCAGTCTCCAGACAAGTaGAAGCAGATCCTGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: IGLNDEFGVSKSPLFQKQQSPDK*KQILRC Trigger: GCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTG...CTGTTTTTGAAATAAGGGACTCTTTGAAACACCAAACTCATCATTGAGGCCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAAGCCCCACATTCCCAGTaGAAGCTACAGGCTACAAAA | + |
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Preference number: 2 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQAPHSQ*KLQATK Trigger: TTTTGTAGCCTGTAGCTTTCACTGGGAATGTGGGGC...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | CACATTCCCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACCTACAGTATGGATTTTaGAATCTGGATTCTCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: HIPSESYRLQNTSLKLAHLQYGF*NLDSQD Trigger: GTCTTGAGAATCCAGATTTCAAAATCCATACTGTAG...GTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGGGAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | CACATTCCCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAATGCTGAAAGACATTaGTCTGTGTGTACACACTTA | + |
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Preference number: 2 (lower is better) Translates to: HIPSESYRLQNTSLKLAHNAERH*SVCTHL Trigger: TAAGTGTGTACACACAGATCAATGTCTTTCAGCATT...GTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGGGAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAACATACTGTAGAAGCATaGGCGATGTTCAGAGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQHTVEA*AMFRGA Trigger: TGCACCTCTGAACATCGCTCATGCTTCTACAGTATG...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTCTCTTAAACTGGCCCACAAATGTGACTGCTTAAATACAGACAGTGAACTCACCACCACCAAAACTTaGTGGGAAAAGTCAGATTGG | + |
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Preference number: 2 (lower is better) Translates to: TSLKLAHKCDCLNTDSELTTTKT*WEKSDW Trigger: CCAATCTGACTTTTCCCATCAAGTTTTGGTGGTGGT...GAGTTCACTGTCTGTATTTAAGCAGTCACATTTGTGGGCCAGTTTAAGAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGACTGCGAAATCTTTCATGGCTaGAATCTTGGATCCCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: ESYRLQNTSLKLAHKCDCEIFHG*NLGSLN Trigger: ATTTAGGGATCCAAGATTTCAGCCATGAAAGATTTC...GCAGTCACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGCTACAGTATGGATTTTaGAATCTGGATTCTCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: PVKATGYKTLLLNWPTNVLQYGF*NLDSQD Trigger: GTCTTGAGAATCCAGATTTCAAAATCCATACTGTAG...CACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGAATGCTGAAAGACATTaGTCTGTGTGTACACACTTA | + |
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Preference number: 2 (lower is better) Translates to: PVKATGYKTLLLNWPTNVNAERH*SVCTHL Trigger: TAAGTGTGTACACACAGATCAATGTCTTTCAGCATT...CACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGACTGCGTGCTAGCTTTTCCTTaGTCAAAGATCTTAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: ESYRLQNTSLKLAHKCDCVLAFP*SKILMS Trigger: AGACATTAAGATCTTTGAGCAAGGAAAAGCTAGCAC...GCAGTCACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAAATGGGCCTCATGTCCTaGGTATATAGGATTCAGATG | + |
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Preference number: 2 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQMGLMS*VYRIQM Trigger: CATCTGAATCCTATATACCCAGGACATGAGGCCCAT...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCCTCAATGATGAGTTTGGTGTTTCAAAGAGTCCCTTATTTCAAAAACAGGAACCCAACAGACCATaGATAGACACAAGAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: IGLNDEFGVSKSPLFQKQEPNRP*IDTRVF Trigger: GAAGACTCTTGTGTCTATCCATGGTCTGTTGGGTTC...CTGTTTTTGAAATAAGGGACTCTTTGAAACACCAAACTCATCATTGAGGCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR GCA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAAGCCCACAAATGTGACTaGTTAAATACAGACAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQAHKCD*LNTDSE Trigger: TTCACTGTCTGTATTTAAGCAGTCACATTTGTGGGC...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR GCA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAAGTGCTAGCTTTTCCTTaGTCAAAGATCTTAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQVLAFP*SKILMS Trigger: AGACATTAAGATCTTTGAGCAAGGAAAAGCTAGCAC...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR GCA 90 bp | ATAGGCCTCAATGATGAGTTTGGTGTTTCAAAGAGTCCCTTATTTCAAAAACAGGCCCACAAATGTGACTaGTTAAATACAGACAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: IGLNDEFGVSKSPLFQKQAHKCD*LNTDSE Trigger: TTCACTGTCTGTATTTAAGCAGTCACATTTGTGGGC...CTGTTTTTGAAATAAGGGACTCTTTGAAACACCAAACTCATCATTGAGGCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR-3UTR TCA 90 bp | AGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAAACATACACACTTTTGGCTCTGTaGAGTATTTCTTCCGATTCA | + |
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Preference number: 2 (lower is better) Translates to: RPNIRTYEETIHTYMQTYTLLAL*SISSDS Trigger: TGAATCGGAAGAAATACTTCACAGAGCCAAAAGTGT...GTATGTTTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR TCA 72 bp | ACAAAGCTGCAGCGCGTTACAGATGGATGCCCGAGGTaGCCCTCCTGGAGGCGAGGAGAGGCACCTGGCATA | + |
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Preference number: 3 (lower is better) Translates to: TKLQRVTDGCPR*PSWRRGEAPGI Trigger: TATGCCAGGTGCCTCTCCTCGCCTCCAGGAGGGTCACCTCGGGCATCCATCTGTAACGCGCTGCAGCTTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR GCA 72 bp | TCGAACTCAGAAATCCACCTGCCTCTGCCTCCTGAGTaGTGGGATGAAAGGCATGGGCCTCCACTGCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: SNSEIHLPLPPE*WDERHGPPLPS Trigger: ACTAGGCAGTGGAGGCCCATGCCTTTCATCCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR CCA 72 bp | TGGACTAAATCATACAAAGCTGCAGCGCGTTACAGATaGATGCCCGAGGTGACCCTCCTGGAGGCGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: WTKSYKAAARYR*MPEVTLLEARR Trigger: TCTCCTCGCCTCCAGGAGGGTCACCTCGGGCATCCATCTGTAACGCGCTGCAGCTTTGTATGATTTAGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR TCA 72 bp | CTTCATGACCCCTCGGCTAACAGCAGACAATCTGACTaGTCCCTACTTCACCCACCCCTGCTCCATAAACCC | + |
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Preference number: 3 (lower is better) Translates to: LHDPSANSRQSD*SLLHPPLLHKP Trigger: GGGTTTATGGAGCAGGGGTGGGTGAAGTAGGGATCAGTCAGATTGTCTGCTGTTAGCCGAGGGGTCATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR TCA 72 bp | GACAACTACACCTTTAATCCCCAGTGCTTAGGGTGCTaGGACAGGTGGATCTCTGTGAGTTTGAGGCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: DNYTFNPQCLGC*DRWISVSLRPA Trigger: GGCTGGCCTCAAACTCACAGAGATCCACCTGTCTCAGCACCCTAAGCACTGGGGATTAAAGGTGTAGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR TCA 72 bp | ACTGAAGTCTTAGAACAACGCTGGAAGGCACGGCTATaGTGGGCCTCATGTCCTGGGTATATAGGATTCAGA | + |
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Preference number: 3 (lower is better) Translates to: TEVLEQRWKARL*WASCPGYIGFR Trigger: TCTGAATCCTATATACCCAGGACATGAGGCCCATCATAGCCGTGCCTTCCAGCGTTGTTCTAAGACTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR TCA 72 bp | CAGATTGGCAGTCTCCAGACAAGTGAAAGCAGATCCTaGGGTGCCAGACCAAACATACGTACATATGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: QIGSLQTSESRS*GARPNIRTYEE Trigger: CTCTTCATATGTACGTATGTTTGGTCTGGCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTGCCAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| 3UTR CCA 72 bp | GCTTCAAACTCATCGCCTGCCTCTGCTTCTCAAGTATaGGAGATGAAAAGAACGAACCACCAATACCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASNSSPASASQV*EMKRTNHQYLS Trigger: AGACAGGTATTGGTGGTTCGTTCTTTTCATCTCCCATACTTGAGAAGCAGAGGCAGGCGATGAGTTTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR TCA 72 bp | TCAGCGTTCTACATAACAGATGAAATCTTTCATGGCTaGAATCTTGGATCCCTAAATGACCCGCCACCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SAFYITDEIFHG*NLGSLNDPPPW Trigger: CCACGGTGGCGGGTCATTTAGGGATCCAAGATTTCAGCCATGAAAGATTTCATCTGTTATGTAGAACGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR GCA 72 bp | CACTCTATAGTGAAGCCTAGCTTCAAACTCATCGCCTaGCTCTGCTTCTCAAGTATGGGAGATGAAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HSIVKPSFKLIA*LCFSSMGDEKN Trigger: GTTCTTTTCATCTCCCATACTTGAGAAGCAGAGGCAGGCGATGAGTTTGAAGCTAGGCTTCACTATAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR CCA 72 bp | TTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTaGGCAACTATCACACACATTAAGCCCCGTGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LFCFNNSRQLLC*ATITHIKPRAW Trigger: CCAGGCACGGGGCTTAATGTGTGTGATAGTTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGCACCACCACCAAAACTaGATGGGAAAAGTCAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: PVKATGYKTLLLNWPTNVHHHQN*MGKVRL Trigger: CAATCTGACTTTTCCCATCAAGTTTTGGTGGTGGTG...CACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR TCA 72 bp | GCAGGCGACAGGACCATCAGCGTTCTACATAACAGATaGAATCTTTCATGGCTGAAATCTTGGATCCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: AGDRTISVLHNR*NLSWLKSWIPK Trigger: TTTAGGGATCCAAGATTTCAGCCATGAAAGATTTCATCTGTTATGTAGAACGCTGATGGTCCTGTCGCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR GCA 72 bp | CAAAACACTTCTCTTAAACTGGCCCACAAATGTGACTaGTTAAATACAGACAGTGAACTCCCTCCCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QNTSLKLAHKCD*LNTDSELPPSR Trigger: TCTGGAGGGAGGGAGTTCACTGTCTGTATTTAAGCAGTCACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGTTGACATTCACGTGTTaGAGAGTGATAGTCTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: PVKATGYKTLLLNWPTNVLTFTC*RVIVYS Trigger: ACTGTAGACTATCACTCTCAAACACGTGAATGTCAA...CACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR TCA 72 bp | CACGTGTTTGAGAGTGATAGTCTACAGTATGGATTTTaGAATCTGGATTCTCAAGACCGTGCTAGCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HVFESDSLQYGF*NLDSQDRASFS Trigger: GGAAAAGCTAGCACGGTCTTGAGAATCCAGATTTCAAAATCCATACTGTAGACTATCACTCTCAAACACGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCCAGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAAGTGTGTACACACTTATaGACATTCACGTGTTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GARPNIRTYEETIHTYMQVCTHL*TFTCLR Trigger: TCTCAAACACGTGAATGTCAATAAGTGTGTACACAC...TTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCTGGCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGGCCTCAATGATGAGTTTGGTGTTTCAAAGAGTCCCTTATTTCAAAAACAGCACCACCACCAAAACTaGATGGGAAAAGTCAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: IGLNDEFGVSKSPLFQKQHHHQN*MGKVRL Trigger: CAATCTGACTTTTCCCATCAAGTTTTGGTGGTGGTG...CTGTTTTTGAAATAAGGGACTCTTTGAAACACCAAACTCATCATTGAGGCCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR CCA 72 bp | TTGAGAGTGATAGTCTACAGTATGGATTTTGAAATCTaGATTCTCAAGACCGTGCTAGCTTTTCCTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LRVIVYSMDFEI*ILKTVLAFPCS Trigger: TGAGCAAGGAAAAGCTAGCACGGTCTTGAGAATCCAGATTTCAAAATCCATACTGTAGACTATCACTCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR GCA 72 bp | TATTCAGAGTCTATAGGTATGGCCGCCATCTGTTTATaGTCATGTCAAAGGAAAGGCTATGTTAAAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: YSESIGMAAICL*SCQRKGYVKKQ Trigger: TTGCTTTTTAACATAGCCTTTCCTTTGACATGAGCATAAACAGATGGCGGCCATACCTATAGACTCTGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR CCA 72 bp | ATGGGAGATGAAAAGAACGAACCACCAATACCTGTCTaGCATATTGACTTGATGTATTTACAAGAGAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: MGDEKNEPPIPV*HIDLMYLQERH Trigger: ATGTCTCTCTTGTAAATACATCAAGTCAATATGCCAGACAGGTATTGGTGGTTCGTTCTTTTCATCTCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGGCCTCAATGATGAGTTTGGTGTTTCAAAGAGTCCCTTATTTCAAAAACAGTTGACATTCACGTGTTaGAGAGTGATAGTCTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: IGLNDEFGVSKSPLFQKQLTFTC*RVIVYS Trigger: ACTGTAGACTATCACTCTCAAACACGTGAATGTCAA...CTGTTTTTGAAATAAGGGACTCTTTGAAACACCAAACTCATCATTGAGGCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR TCA 72 bp | GGAAAGGCTATGTTAAAAAGCAATGCTGAAAGACATTaGTCTGTGTGTACACACTTATTGACATTCACGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GKAMLKSNAERH*SVCTHLLTFTC Trigger: ACACGTGAATGTCAATAAGTGTGTACACACAGATCAATGTCTTTCAGCATTGCTTTTTAACATAGCCTTTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| 3UTR TCA 72 bp | TCATGTCAAAGGAAAGGCTATGTTAAAAAGCAATGCTaGAAGACATTGATCTGTGTGTACACACTTATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SCQRKGYVKKQC*KTLICVYTLID Trigger: GTCAATAAGTGTGTACACACAGATCAATGTCTTTCAGCATTGCTTTTTAACATAGCCTTTCCTTTGACATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCAGTCTCCAGACAAGTGAAAGCAGATCCTGAGGTGCCAGACCAAACATACTGCAGGTGGATTCTCTaGCCTCGGCCCACAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAVSRQVKADPEVPDQTYCRWIL*PRPTAP Trigger: TGGAGCTGTGGGCCGAGGCCAGAGAATCCACCTGCA...GTATGTTTGGTCTGGCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCAGTCTCCAGACAAGTGAAAGCAGATCCTGAGGTGCCAGACCAAACATACTCCCATAACTGCAGGTaGATTCTCTGGCCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAVSRQVKADPEVPDQTYSHNCR*ILWPRP Trigger: GGGCCGAGGCCAGAGAATCCACCTGCAGTTATGGGA...GTATGTTTGGTCTGGCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATCTTAATGTCTTCAATGAGACTCTAGGGCTGTCCTGTGTTGAGGCAGGCCTCCATCTGGCCCATTaGCTCTGTACACCACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KDLNVFNETLGLSCVEAGLHLAH*LCTPLS Trigger: AGAGAGTGGTGTACAGAGCCAATGGGCCAGATGGAG...GCCTGCCTCAACACAGGACAGCCCTAGAGTCTCATTGAAGACATTAAGATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCAGTCTCCAGACAAGTGAAAGCAGATCCTGAGGTGCCAGACCAAACATACAGCATCTCAATCGCGTaGCTTATGTTTGTCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAVSRQVKADPEVPDQTYSISIA*LMFVPL Trigger: CAACGGGACAAACATAAGCCACGCGATTGAGATGCT...GTATGTTTGGTCTGGCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGCTTCTCAAGTATGGGAGATGAAAAGAACGAACCACCAATACCTGTCTCCACTCTCTTTTCCCTaGAATCAATGCCCACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASASQVWEMKRTNHQYLSPLSFP*NQCPLW Trigger: CCACAGTGGGCATTGATTTCAGGGAAAAGAGAGTGG...AGACAGGTATTGGTGGTTCGTTCTTTTCATCTCCCATACTTGAGAAGCAGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | CACATTCCCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACACTGGTAGAGTACACTaGTCTTCCCTACCCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HIPSESYRLQNTSLKLAHTGRVH*SSLPQS Trigger: ACTCTGGGGTAGGGAAGACCAGTGTACTCTACCAGT...GTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGGGAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGACTGCCTCCATCTGGCCCATTaGCTCTGTACACCACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESYRLQNTSLKLAHKCDCLHLAH*LCTPLS Trigger: AGAGAGTGGTGTACAGAGCCAATGGGCCAGATGGAG...GCAGTCACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR TCA 90 bp | GAAATCTGGATTCTCAAGACCGTGCTAGCTTTTCCTTGCTCAAAGATCTTAATGGCTCCATCCGCTTCATaGTCAGGTCCAGGAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EIWILKTVLAFPCSKILMAPSAS*SGPGAS Trigger: AGATGCTCCTGGACCTGATCATGAAGCGGATGGAGC...CATTAAGATCTTTGAGCAAGGAAAAGCTAGCACGGTCTTGAGAATCCAGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR GCA 90 bp | GAAATCTGGATTCTCAAGACCGTGCTAGCTTTTCCTTGCTCAAAGATCTTAATGGCCGTGTCCCATAACTaGAGGTGGATTCTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EIWILKTVLAFPCSKILMAVSHN*RWILWP Trigger: AGGCCAGAGAATCCACCTGCAGTTATGGGACACGGC...CATTAAGATCTTTGAGCAAGGAAAAGCTAGCACGGTCTTGAGAATCCAGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAACTCCTCCTCTTTCACTaGCCTCTGGTCTTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GARPNIRTYEETIHTYMQLLLFH*PLVFQV Trigger: GACCTGGAAGACCAGAGGGCAGTGAAAGAGGAGGAG...TTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCTGGCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAATCCCATAACTGCAGGTaGATTCTCTGGCCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQSHNCR*ILWPRP Trigger: GGGCCGAGGCCAGAGAATCCACCTGCAGTTATGGGA...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCTGCTTCTCAAGTATGGGAGATGAAAAGAACGAACCACCAATACCTGTCTTCTTTCACTGCCCTCTaGTCTTCCAGGTCACTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ASASQVWEMKRTNHQYLSSFTAL*SSRSLL Trigger: TAAGAGTGACCTGGAAGACCAGAGGGCAGTGAAAGA...AGACAGGTATTGGTGGTTCGTTCTTTTCATCTCCCATACTTGAGAAGCAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGACTGCTCCCGTTGGCAGCACTaGTTTCAAAATAGGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: ESYRLQNTSLKLAHKCDCSRWQH*FQNRGF Trigger: GAATCCCCTATTTTGAAACCAGTGCTGCCAACGGGA...GCAGTCACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCCAGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAACCACTCTCTTTTCCCTaGAATCAATGCCCACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GARPNIRTYEETIHTYMQPLSFP*NQCPLW Trigger: CCACAGTGGGCATTGATTTCAGGGAAAAGAGAGTGG...TTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCTGGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGCCTCAATGATGAGTTTGGTGTTTCAAAGAGTCCCTTATTTCAAAAACAGGCCGTGTCCCATAACTaGAGGTGGATTCTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IGLNDEFGVSKSPLFQKQAVSHN*RWILWP Trigger: AGGCCAGAGAATCCACCTGCAGTTATGGGACACGGC...CTGTTTTTGAAATAAGGGACTCTTTGAAACACCAAACTCATCATTGAGGCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGACTGCACACAGCACTATATCTaGGTTTTCACAGTACGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESYRLQNTSLKLAHKCDCTQHYI*VFTVRV Trigger: CACGCGTACTGTGAAAACCCAGATATAGTGCTGTGT...GCAGTCACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR GCA 90 bp | AAAGATCTTAATGTCTTCAATGAGACTCTAGGGCTGTCCTGTGTTGAGGCAGGCACATTGAGGAAACTTTaGTCATTTGTCAGGTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KDLNVFNETLGLSCVEAGTLRKL*SFVRSN Trigger: GTTCGACCTGACAAATGAGCAAAGTTTCCTCAATGT...GCCTGCCTCAACACAGGACAGCCCTAGAGTCTCATTGAAGACATTAAGATCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | ACTTCTCTTAAACTGGCCCACAAATGTGACTGCTTAAATACAGACAGTGAACTCTCCCGTTGGCAGCACTaGTTTCAAAATAGGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: TSLKLAHKCDCLNTDSELSRWQH*FQNRGF Trigger: GAATCCCCTATTTTGAAACCAGTGCTGCCAACGGGA...GAGTTCACTGTCTGTATTTAAGCAGTCACATTTGTGGGCCAGTTTAAGAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | GAAATCTGGATTCTCAAGACCGTGCTAGCTTTTCCTTGCTCAAAGATCTTAATGAGCATCTCAATCGCGTaGCTTATGTTTGTCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EIWILKTVLAFPCSKILMSISIA*LMFVPL Trigger: CAACGGGACAAACATAAGCCACGCGATTGAGATGCT...CATTAAGATCTTTGAGCAAGGAAAAGCTAGCACGGTCTTGAGAATCCAGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCCAGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAATTTTCACAGTACGCGTaGATCTGTAGCTGGCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: GARPNIRTYEETIHTYMQFSQYA*ICSWLI Trigger: GATAAGCCAGCTACAGATGCACGCGTACTGTGAAAA...TTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCTGGCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAAACACAGCACTATATCTaGGTTTTCACAGTACGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GARPNIRTYEETIHTYMQTQHYI*VFTVRV Trigger: CACGCGTACTGTGAAAACCCAGATATAGTGCTGTGT...TTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCTGGCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAATCTTTCACTGCCCTCTaGTCTTCCAGGTCACTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQSFTAL*SSRSLL Trigger: TAAGAGTGACCTGGAAGACCAGAGGGCAGTGAAAGA...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGTTATGTTTGTCCCGTTaGCAGCACTGGTTTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVKATGYKTLLLNWPTNVLCLSR*QHWFQN Trigger: ATTTTGAAACCAGTGCTGCCAACGGGACAAACATAA...CACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCCAGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAATCCAGTTTCGGACATTaGGGAAACTTTGCTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GARPNIRTYEETIHTYMQSSFGH*GNFAHL Trigger: CAAATGAGCAAAGTTTCCTCAATGTCCGAAACTGGA...TTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCTGGCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | AGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAAACATACACTGGTAGAGTACACTaGTCTTCCCTACCCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPNIRTYEETIHTYMQTYTGRVH*SSLPQS Trigger: ACTCTGGGGTAGGGAAGACCAGTGTACTCTACCAGT...GTATGTTTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR TCA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAATCCAGTTTCGGACATTaGGGAAACTTTGCTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQSSFGH*GNFAHL Trigger: CAAATGAGCAAAGTTTCCTCAATGTCCGAAACTGGA...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCCAGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAATTATGTTTGTCCCGTTaGCAGCACTGGTTTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GARPNIRTYEETIHTYMQLCLSR*QHWFQN Trigger: ATTTTGAAACCAGTGCTGCCAACGGGACAAACATAA...TTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCTGGCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGCCTCAATGATGAGTTTGGTGTTTCAAAGAGTCCCTTATTTCAAAAACAGACATTGAGGAAACTTTaGTCATTTGTCAGGTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IGLNDEFGVSKSPLFQKQTLRKL*SFVRSN Trigger: GTTCGACCTGACAAATGAGCAAAGTTTCCTCAATGT...CTGTTTTTGAAATAAGGGACTCTTTGAAACACCAAACTCATCATTGAGGCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS CCA 90 bp | CCTTCTCCTTCTCCTCACTTAGCTGATCCGCAGAGGTATGGCCGTTaGACCGTACCACTCCCTCCGGAATCCAGGACTTGTCCACACACC | + |
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Preference number: 5 (lower is better) Translates to: PSPSPHLADPQRYGR*TVPLPPESRTCPHT Trigger: GGTGTGTGGACAAGTCCTGGATTCCGGAGGGAGTGGTACGGTCCAACGGCCATACCTCTGCGGATCAGCTAAGTGAGGAGAAGGAGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS TCA 90 bp | CCTCCGGAATCCAGGACTTGTCCACACACCGCTCCATCCGCTTCATaGTCAGGTCCAGGAGCATCTCAATCGCGTGGCTTATGTTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: PPESRTCPHTAPSAS*SGPGASQSRGLCLS Trigger: GGACAAACATAAGCCACGCGATTGAGATGCTCCTGGACCTGATCATGAAGCGGATGGAGCGGTGTGTGGACAAGTCCTGGATTCCGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS GCA 90 bp | GATTCCGTACTTCTCGGCAAGTTCCCGGGCCTCCTCCTCTTTCACTaGCCTCTGGTCTTCCAGGTCACTCTTATTTCCACACAGCACTAT | + |
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Preference number: 5 (lower is better) Translates to: DSVLLGKFPGLLLFH*PLVFQVTLISTQHY Trigger: ATAGTGCTGTGTGGAAATAAGAGTGACCTGGAAGACCAGAGGGCAGTGAAAGAGGAGGAGGCCCGGGAACTTGCCGAGAAGTACGGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS CCA 90 bp | GGAGCATCTCAATCGCGTGGCTTATGTTTGTCCCGTTGGCAGCACTaGTTTCAAAATAGGGGATTCCGTACTTCTCGGCAAGTTCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: GASQSRGLCLSRWQH*FQNRGFRTSRQVPG Trigger: CCCGGGAACTTGCCGAGAAGTACGGAATCCCCTATTTTGAAACCAGTGCTGCCAACGGGACAAACATAAGCCACGCGATTGAGATGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | TTGGCAGTCTCCAGACAAGTGAAAGCAGATCCTGAGGTGCCAGACCAAACATACGCTCCATCTGGCCCATaGGCTCTGTACACCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: LAVSRQVKADPEVPDQTYAPSGP*ALYTTL Trigger: GAGAGTGGTGTACAGAGCCAATGGGCCAGATGGAGC...GTATGTTTGGTCTGGCACCTCAGGATCTGCTTTCACTTGTCTGGAGACTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS CCA 90 bp | TCAGGTCCAGGAGCATCTCAATCGCGTGGCTTATGTTTGTCCCGTTaGCAGCACTGGTTTCAAAATAGGGGATTCCGTACTTCTCGGCAA | + |
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Preference number: 5 (lower is better) Translates to: SGPGASQSRGLCLSR*QHWFQNRGFRTSRQ Trigger: TTGCCGAGAAGTACGGAATCCCCTATTTTGAAACCAGTGCTGCCAACGGGACAAACATAAGCCACGCGATTGAGATGCTCCTGGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | CACATTCCCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACTCCGGAATCCAGGACTaGTCCACACACCGCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: HIPSESYRLQNTSLKLAHSGIQD*STHRSI Trigger: GATGGAGCGGTGTGTGGACAAGTCCTGGATTCCGGA...GTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGGGAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | GAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGACTGCTCGCGTGGCTTATGTTaGTCCCGTTGGCAGCACTGG | + |
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Preference number: 5 (lower is better) Translates to: ESYRLQNTSLKLAHKCDCSRGLC*SRWQHW Trigger: CCAGTGCTGCCAACGGGACAAACATAAGCCACGCGA...GCAGTCACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS GCA 90 bp | TGCATCTGTAGCTGGCTTATCCAGTTTCGGACATTGAGGAAACTTTaGTCATTTGTCAGGTCGAACAGAAGCAGGAAACCCATAGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: CICSWLIQFRTLRKL*SFVRSNRSRKPIAS Trigger: GGACGCTATGGGTTTCCTGCTTCTGTTCGACCTGACAAATGAGCAAAGTTTCCTCAATGTCCGAAACTGGATAAGCCAGCTACAGATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | ACTTCTCTTAAACTGGCCCACAAATGTGACTGCTTAAATACAGACAGTGAACTCGCTCCATCTGGCCCATaGGCTCTGTACACCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: TSLKLAHKCDCLNTDSELAPSGP*ALYTTL Trigger: GAGAGTGGTGTACAGAGCCAATGGGCCAGATGGAGC...GAGTTCACTGTCTGTATTTAAGCAGTCACATTTGTGGGCCAGTTTAAGAGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAATCCGGAATCCAGGACTaGTCCACACACCGCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQSGIQD*STHRSI Trigger: GATGGAGCGGTGTGTGGACAAGTCCTGGATTCCGGA...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | CACATTCCCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACCTTATGTTTGTCCCGTaGGCAGCACTGGTTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: HIPSESYRLQNTSLKLAHLMFVP*AALVSK Trigger: TTTTGAAACCAGTGCTGCCAACGGGACAAACATAAG...GTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGGGAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | CACATTCCCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACGACATTGAGGAAACTTaGCTCATTTGTCAGGTCGAA | + |
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Preference number: 5 (lower is better) Translates to: HIPSESYRLQNTSLKLAHDIEET*LICQVE Trigger: TTCGACCTGACAAATGAGCAAAGTTTCCTCAATGTC...GTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGGGAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | CCAGTGAAAGCTACAGGCTACAAAACACTTCTCTTAAACTGGCCCACAAATGTGCTTATGTTTGTCCCGTaGGCAGCACTGGTTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: PVKATGYKTLLLNWPTNVLMFVP*AALVSK Trigger: TTTTGAAACCAGTGCTGCCAACGGGACAAACATAAG...CACATTTGTGGGCCAGTTTAAGAGAAGTGTTTTGTAGCCTGTAGCTTTCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | AGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAAACATACTCGCGTGGCTTATGTTaGTCCCGTTGGCAGCACTGG | + |
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Preference number: 5 (lower is better) Translates to: RPNIRTYEETIHTYMQTYSRGLC*SRWQHW Trigger: CCAGTGCTGCCAACGGGACAAACATAAGCCACGCGA...GTATGTTTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | ACTTCTCTTAAACTGGCCCACAAATGTGACTGCTTAAATACAGACAGTGAACTCGGAAACTTTGCTCATTaGTCAGGTCGAACAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: TSLKLAHKCDCLNTDSELGNFAH*SGRTEA Trigger: TGCTTCTGTTCGACCTGACAAATGAGCAAAGTTTCC...GAGTTCACTGTCTGTATTTAAGCAGTCACATTTGTGGGCCAGTTTAAGAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAAGTGATGAATTTGGAGTaGAACTTGCCATCAGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQVMNLE*NLPSVY Trigger: GTACACTGATGGCAAGTTCAACTCCAAATTCATCAC...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | AGAACTCAGTTTTGTTTTGTTTCAACAATTCAAGGCAGCTCTTGTGTTGGGCAAGACATTGAGGAAACTTaGCTCATTTGTCAGGTCGAA | + |
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Preference number: 5 (lower is better) Translates to: RTQFCFVSTIQGSSCVGQDIEET*LICQVE Trigger: TTCGACCTGACAAATGAGCAAAGTTTCCTCAATGTC...TTGCCCAACACAAGAGCTGCCTTGAATTGTTGAAACAAAACAAAACTGAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS-3UTR CAA 90 bp | AGACCAAACATACGTACATATGAAGAGACCATACATACATACATGCAAACATACGTGATGAATTTGGAGTaGAACTTGCCATCAGTGTAC | + |
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Preference number: 5 (lower is better) Translates to: RPNIRTYEETIHTYMQTYVMNLE*NLPSVY Trigger: GTACACTGATGGCAAGTTCAACTCCAAATTCATCAC...GTATGTTTGCATGTATGTATGTATGGTCTCTTCATATGTACGTATGTTTGGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS TCA 72 bp | CAGCCACACAACCCCTTCTCCTTCTCCTCACTTAGCTaGTCCGCAGAGGTATGGCCGTTGGACCGTACCACT | + |
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Preference number: 6 (lower is better) Translates to: QPHNPFSFSSLS*SAEVWPLDRTT Trigger: AGTGGTACGGTCCAACGGCCATACCTCTGCGGATCAGCTAAGTGAGGAGAAGGAGAAGGGGTTGTGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS CCA 72 bp | TCTCCTCACTTAGCTGATCCGCAGAGGTATGGCCGTTaGACCGTACCACTCCCTCCGGAATCCAGGACTTGT | + |
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Preference number: 6 (lower is better) Translates to: SPHLADPQRYGR*TVPLPPESRTC Trigger: ACAAGTCCTGGATTCCGGAGGGAGTGGTACGGTCCAACGGCCATACCTCTGCGGATCAGCTAAGTGAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS CAA 72 bp | ATTCTCTGGCCTCGGCCCACAGCTCCATCTGGCCCATaGGCTCTGTACACCACTCTCTTTTCCCTGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: ILWPRPTAPSGP*ALYTTLFSLKS Trigger: TGATTTCAGGGAAAAGAGAGTGGTGTACAGAGCCAATGGGCCAGATGGAGCTGTGGGCCGAGGCCAGAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS CCA 72 bp | CGCTTCATGATCAGGTCCAGGAGCATCTCAATCGCGTaGCTTATGTTTGTCCCGTTGGCAGCACTGGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RFMIRSRSISIA*LMFVPLAALVS Trigger: TGAAACCAGTGCTGCCAACGGGACAAACATAAGCCACGCGATTGAGATGCTCCTGGACCTGATCATGAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS CAA 72 bp | TCAGGTCCAGGAGCATCTCAATCGCGTGGCTTATGTTaGTCCCGTTGGCAGCACTGGTTTCAAAATAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SGPGASQSRGLC*SRWQHWFQNRG Trigger: TCCCCTATTTTGAAACCAGTGCTGCCAACGGGACAAACATAAGCCACGCGATTGAGATGCTCCTGGACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS CCA 72 bp | CAATCGCGTGGCTTATGTTTGTCCCGTTGGCAGCACTaGTTTCAAAATAGGGGATTCCGTACTTCTCGGCAA | + |
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Preference number: 6 (lower is better) Translates to: QSRGLCLSRWQH*FQNRGFRTSRQ Trigger: TTGCCGAGAAGTACGGAATCCCCTATTTTGAAACCAGTGCTGCCAACGGGACAAACATAAGCCACGCGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS CCA 72 bp | GGAGCATCTCAATCGCGTGGCTTATGTTTGTCCCGTTaGCAGCACTGGTTTCAAAATAGGGGATTCCGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GASQSRGLCLSR*QHWFQNRGFRT Trigger: AGTACGGAATCCCCTATTTTGAAACCAGTGCTGCCAACGGGACAAACATAAGCCACGCGATTGAGATGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS GCA 72 bp | CCACACAGCACTATATCTGGGTTTTCACAGTACGCGTaGATCTGTAGCTGGCTTATCCAGTTTCGGACATTG | + |
|
Preference number: 6 (lower is better) Translates to: PHSTISGFSQYA*ICSWLIQFRTL Trigger: CAATGTCCGAAACTGGATAAGCCAGCTACAGATGCACGCGTACTGTGAAAACCCAGATATAGTGCTGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS GCA 72 bp | AGCTGGCTTATCCAGTTTCGGACATTGAGGAAACTTTaGTCATTTGTCAGGTCGAACAGAAGCAGGAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: SWLIQFRTLRKL*SFVRSNRSRKP Trigger: GGGTTTCCTGCTTCTGTTCGACCTGACAAATGAGCAAAGTTTCCTCAATGTCCGAAACTGGATAAGCCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS CAA 72 bp | GCGTGCATCTGTAGCTGGCTTATCCAGTTTCGGACATaGAGGAAACTTTGCTCATTTGTCAGGTCGAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: ACICSWLIQFRT*RKLCSFVRSNR Trigger: TCTGTTCGACCTGACAAATGAGCAAAGTTTCCTCAATGTCCGAAACTGGATAAGCCAGCTACAGATGCACGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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| CDS TCA 72 bp | CGTGCATCTGTAGCTGGCTTATCCAGTTTCGGACATTaGGGAAACTTTGCTCATTTGTCAGGTCGAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: RASVAGLSSFGH*GNFAHLSGRTE Trigger: TTCTGTTCGACCTGACAAATGAGCAAAGTTTCCTCAATGTCCGAAACTGGATAAGCCAGCTACAGATGCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034722.5 ENSMUST00000184146.8 |
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