Pregenerated sensors for RAB23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004768Ensembl transcript IDs: ENSMUST00000088287.10, ENSMUST00000115174.4, ENSMUST00000138024.8
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAAAGCTCTGCCCTTGTGGGCTCCCTGCAGCCCACACATCTCTCTaGGGTGCTCCCAGGGCACTCACCACAGCCACCAGGATCCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: PKLCPCGLPAAHTSL*GAPRALTTATRILQ Trigger: CTGGAGGATCCTGGTGGCTGTGGTGAGTGCCCTGGGAGCACCTCAGAGAGATGTGTGGGCTGCAGGGAGCCCACAAGGGCAGAGCTTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR GCA 90 bp | AGCAAGCATGTGGACCACCATGGAGGGAGGGCGCTCAGCGACCTCTaGTCGCAACAGGAACCTGTGCTGGGCAGGATGGGTGGTACGCCA | + |
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Preference number: 1 (lower is better) Translates to: SKHVDHHGGRALSDL*SQQEPVLGRMGGTP Trigger: TGGCGTACCACCCATCCTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTCCCTCCATGGTGGTCCACATGCTTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR TCA 90 bp | GGAGCACAGCAGAGCAGCGTTACAATGTCAGCTTTCAGAGCGTGGTaGGAGGCCCACGACACACGCAGGACAGCCCGCACACAGTGCCGT | + |
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Preference number: 1 (lower is better) Translates to: GAQQSSVTMSAFRAW*EAHDTRRTARTQCR Trigger: ACGGCACTGTGTGCGGGCTGTCCTGCGTGTGTCGTGGGCCTCTCACCACGCTCTGAAAGCTGACATTGTAACGCTGCTCTGCTGTGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR GCA 90 bp | CCCTTTCCCAGGGCACAGGCCTACTGCCTGAGCCAGGAGTCTGCATaGACACCCCCACAGTCCGCACATCACGGATATTGCACGAGTACC | + |
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Preference number: 1 (lower is better) Translates to: PFPRAQAYCLSQESA*TPPQSAHHGYCTST Trigger: GGTACTCGTGCAATATCCGTGATGTGCGGACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTGCCCTGGGAAAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR GCA 90 bp | CATCCCCTTTCCCAGGGCACAGGCCTACTGCCTGAGCCAGGAGTCTaGATGCACACCCCCACAGTCCGCACATCACGGATATTGCACGAG | + |
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Preference number: 1 (lower is better) Translates to: HPLSQGTGLLPEPGV*MHTPTVRTSRILHE Trigger: CTCGTGCAATATCCGTGATGTGCGGACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTGCCCTGGGAAAGGGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR GCA 90 bp | TCACCTAAGGCTATGGAAGCCAAAGCTCTGCCCTTGTGGGCTCCCTaGAGCCCACACATCTCTCTGAGGTGCTCCCAGGGCACTCACCAC | + |
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Preference number: 1 (lower is better) Translates to: SPKAMEAKALPLWAP*SPHISLRCSQGTHH Trigger: GTGGTGAGTGCCCTGGGAGCACCTCAGAGAGATGTGTGGGCTGCAGGGAGCCCACAAGGGCAGAGCTTTGGCTTCCATAGCCTTAGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR CCA 90 bp | CAGCTTGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTaGTGTGCACGCGCTCCACAGGGCCTTCTGAGTGGCTGCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: QLGSSEFGLRSAARS*CARAPQGLLSGCRL Trigger: CAGCCTGCAGCCACTCAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR CCA 90 bp | GCCTGCTTGGGATGCCAATGGGAAAAGCAAGCATGTGGACCACCATaGAGGGAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGT | + |
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Preference number: 1 (lower is better) Translates to: ACLGCQWEKQACGPP*REGAQRPLLATGTC Trigger: ACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTCCCTCCATGGTGGTCCACATGCTTGCTTTTCCCATTGGCATCCCAAGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR GCA 90 bp | GAACTGACTAGAATCTGCATCCCCTTTCCCAGGGCACAGGCCTACTaGCTGAGCCAGGAGTCTGCATGCACACCCCCACAGTCCGCACAT | + |
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Preference number: 1 (lower is better) Translates to: ELTRICIPFPRAQAY*LSQESACTPPQSAH Trigger: ATGTGCGGACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTGCCCTGGGAAAGGGGATGCAGATTCTAGTCAGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR GCA 90 bp | GAAACATACGCAATGGTTGTACGAGCGAGCGAACTGACTAGAATCTaGATCCCCTTTCCCAGGGCACAGGCCTACTGCCTGAGCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: ETYAMVVRASELTRI*IPFPRAQAYCLSQE Trigger: CTCCTGGCTCAGGCAGTAGGCCTGTGCCCTGGGAAAGGGGATGCAGATTCTAGTCAGTTCGCTCGCTCGTACAACCATTGCGTATGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR GCA 90 bp | AACAGAAAAGTGGCAGTAACCAAGACTCTTTTGGCCGAATCAGTCTaGCATCTGGGCGCTGGCTACCTGGGCATTTCAGACCCTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: NRKVAVTKTLLAESV*HLGAGYLGISDPAG Trigger: CCCAGCAGGGTCTGAAATGCCCAGGTAGCCAGCGCCCAGATGGCAGACTGATTCGGCCAAAAGAGTCTTGGTTACTGCCACTTTTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR CCA 90 bp | ATCACTCTGCAAAGATGGTCCCCTTCAGCTTGGAAGTTCAGAGTTTaGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: ITLQRWSPSAWKFRV*SQVSSQKLVCTRST Trigger: TGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAGCTGAAGGGGACCATCTTTGCAGAGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR CCA 90 bp | TCAGGACCAAAGACCATCACTCTGCAAAGATGGTCCCCTTCAGCTTaGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: SGPKTITLQRWSPSA*KFRVWSQVSSQKLV Trigger: CACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAGCTGAAGGGGACCATCTTTGCAGAGTGATGGTCTTTGGTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR TCA 90 bp | GGCAGTGGAGGGGTCACACATGCTCCCTGTGGTAGTGCTGGAATTTaGAATCTCCATGTGTATGGTCACCTTGAGTGGAGAAGAAACAGT | + |
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Preference number: 1 (lower is better) Translates to: GSGGVTHAPCGSAGI*NLHVYGHLEWRRNS Trigger: ACTGTTTCTTCTCCACTCAAGGTGACCATACACATGGAGATTTCAAATTCCAGCACTACCACAGGGAGCATGTGTGACCCCTCCACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR GCA 90 bp | CAGACTGAACATTCCAGAAAAGCTCGACGCCCAGTGTCAGAACAATaGTTGCCATCCCTCATGGTCCATCAGGGTAAAATGGTTACCGAT | + |
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Preference number: 1 (lower is better) Translates to: QTEHSRKARRPVSEQ*LPSLMVHQGKMVTD Trigger: ATCGGTAACCATTTTACCCTGATGGACCATGAGGGATGGCAAGCATTGTTCTGACACTGGGCGTCGAGCTTTTCTGGAATGTTCAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR CCA 90 bp | CCTGCAGTGTCCCATAACATTAGCCTTACATCTTCATCGTTAACCTaGCTGGCATGGTTAGACGGCACAGCTGTTTCTCTTTCCCGTCAA | + |
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Preference number: 1 (lower is better) Translates to: PAVSHNISLTSSSLT*LAWLDGTAVSLSRQ Trigger: TTGACGGGAAAGAGAAACAGCTGTGCCGTCTAACCATGCCAGCCAGGTTAACGATGAAGATGTAAGGCTAATGTTATGGGACACTGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
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| 3UTR CCA 90 bp | TCCCATAACATTAGCCTTACATCTTCATCGTTAACCTGGCTGGCATaGTTAGACGGCACAGCTGTTTCTCTTTCCCGTCAAGGCTTAGAC | + |
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Preference number: 1 (lower is better) Translates to: SHNISLTSSSLTWLA*LDGTAVSLSRQGLD Trigger: GTCTAAGCCTTGACGGGAAAGAGAAACAGCTGTGCCGTCTAACCATGCCAGCCAGGTTAACGATGAAGATGTAAGGCTAATGTTATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
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| 3UTR TCA 90 bp | TTTGTTAGGTCTAAGGTTGATGACATCGCCACCATTAAGGGAACTTaGATTCTGGCCCAAGTGACTTCTGACCGATGCATTAAAGACACC | + |
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Preference number: 1 (lower is better) Translates to: FVRSKVDDIATIKGT*ILAQVTSDRCIKDT Trigger: GGTGTCTTTAATGCATCGGTCAGAAGTCACTTGGGCCAGAATTCAAGTTCCCTTAATGGTGGCGATGTCATCAACCTTAGACCTAACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
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| 3UTR GCA 90 bp | TCCTCATTTTTGATGCATGAATCATCCAGCAGATCGATCTTGTTTTaGACCAGTGCGGTTGGTATATCTCCAACCTCCGCTACTACTTTT | + |
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Preference number: 1 (lower is better) Translates to: SSFLMHESSSRSILF*TSAVGISPTSATTF Trigger: AAAAGTAGTAGCGGAGGTTGGAGATATACCAACCGCACTGGTGCAAAACAAGATCGATCTGCTGGATGATTCATGCATCAAAAATGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
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| 3UTR TCA 90 bp | TTGATGACATCGCCACCATTAAGGGAACTTGAATTCTGGCCCAAGTaGCTTCTGACCGATGCATTAAAGACACCAATCTTGTTACTACTT | + |
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Preference number: 1 (lower is better) Translates to: LMTSPPLRELEFWPK*LLTDALKTPILLLL Trigger: AAGTAGTAACAAGATTGGTGTCTTTAATGCATCGGTCAGAAGTCACTTGGGCCAGAATTCAAGTTCCCTTAATGGTGGCGATGTCATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
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| 3UTR GCA 90 bp | CACCTTGAGTGGAGAAGAAACAGTTCAACCTGCTTTTATTTGAACTaGTGTATGTATATGGGCTGTTTTATAAACTATCTCCTTCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: HLEWRRNSSTCFYLN*CMYMGCFINYLLLR Trigger: CCTAAGAAGGAGATAGTTTATAAAACAGCCCATATACATACAGCAGTTCAAATAAAAGCAGGTTGAACTGTTTCTTCTCCACTCAAGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGGAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGTGCTGGGCAGCTCCACAGGGCCTTCTaGGTGGCTGCAGGCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: WREGAQRPLLATGTCAGQLHRAF*VAAGCC Trigger: ACAGCAGCCTGCAGCCACTCAGAAGGCCCTGTGGAG...CTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTCCCTCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGTGCTGGGCAGGATGGGCTTTGGCAGGCAGGCTaGTGCCCAGCTCACACGTTT | + |
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Preference number: 2 (lower is better) Translates to: EGAQRPLLATGTCAGQDGLWQAG*CPAHTF Trigger: AAACGTGTGAGCTGGGCACCAGCCTGCCTGCCAAAG...CCCATCCTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGTGCTGGGCAGGATGGGAACAGGAACCTGTGCTaGGCAGGATGGGTGGTACGC | + |
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Preference number: 2 (lower is better) Translates to: EGAQRPLLATGTCAGQDGNRNLC*AGWVVR Trigger: GCGTACCACCCATCCTGCCCAGCACAGGTTCCTGTT...CCCATCCTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGGCTTTCAGAGCGTGGTaGGAGGCCCACGACACACGC | + |
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Preference number: 2 (lower is better) Translates to: LAGRLVPSSHVSPSFPYRAFRAW*EAHDTR Trigger: GCGTGTGTCGTGGGCCTCTCACCACGCTCTGAAAGC...CCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR TCA 90 bp | GCACCAGGGGCGCTAACAGCTGACCACACAGATGATCCTGCCTGCTTGGGATGCCTCCACAGGGCCTTCTaGGTGGCTGCAGGCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: APGALTADHTDDPACLGCLHRAF*VAAGCC Trigger: ACAGCAGCCTGCAGCCACTCAGAAGGCCCTGTGGAG...GCATCCCAAGCAGGCAGGATCATCTGTGTGGTCAGCTGTTAGCGCCCCTGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGTGCTGGGCAGGATGGGCTATGGAGAAGGCTCTaGGAGAATCCCAGGAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: EGAQRPLLATGTCAGQDGLWRRL*ENPRRD Trigger: GTCCCTCCTGGGATTCTCCCAGAGCCTTCTCCATAG...CCCATCCTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGAGTGGCTTGCACGAGTACCTCTaGCAACACACACACCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RSAARSWCARAPQGLLSGLHEYL*QHTHQG Trigger: GCCCTGGTGTGTGTGTTGTCAGAGGTACTCGTGCAA...GCCACTCAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGCACAGGCCTACTGCCTaGGCCAGGAGTCTGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: LAGRLVPSSHVSPSFPYRHRPTA*ARSLHA Trigger: TGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTG...CCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGCCTGAGCCAGGAGTCTaGATGCACACCCCCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: LAGRLVPSSHVSPSFPYRPEPGV*MHTPTV Trigger: GACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGG...CCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCAGCTTTCAGAGCGTGGTaGGAGGCCCACGACACACGC | + |
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Preference number: 2 (lower is better) Translates to: SSEFGLRSAARSWCARAPAFRAW*EAHDTR Trigger: GCGTGTGTCGTGGGCCTCTCACCACGCTCTGAAAGC...TGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGGAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGTGCTGGGCAGTGTCAGAACAATGCTTaGCATCCCTCATGGTCCATC | + |
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Preference number: 2 (lower is better) Translates to: WREGAQRPLLATGTCAGQCQNNA*HPSWSI Trigger: GATGGACCATGAGGGATGGCAAGCATTGTTCTGACA...CTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTCCCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACCTGAGCCAGGAGTCTaGATGCACACCCCCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: SSEFGLRSAARSWCARAPPEPGV*MHTPTV Trigger: GACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGG...TGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGGAACTGACTAGAATCTaGATCCCCTTTCCCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GLRSAARSWCARAPQGLLELTRI*IPFPRA Trigger: TGCCCTGGGAAAGGGGATGCAGATTCTAGTCAGTTC...CAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR CCA 90 bp | GCACCAGGGGCGCTAACAGCTGACCACACAGATGATCCTGCCTGCTTGGGATGCCTATGGAGAAGGCTCTaGGAGAATCCCAGGAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: APGALTADHTDDPACLGCLWRRL*ENPRRD Trigger: GTCCCTCCTGGGATTCTCCCAGAGCCTTCTCCATAG...GCATCCCAAGCAGGCAGGATCATCTGTGTGGTCAGCTGTTAGCGCCCCTGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGTGCTGGGCAGGATGGGTGCTTACAGTGGCTATaGAGAAGGCTCTGGGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: EGAQRPLLATGTCAGQDGCLQWL*RRLWEN Trigger: ATTCTCCCAGAGCCTTCTCCATAGCCACTGTAAGCA...CCCATCCTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAACTCCCCATCCTAAACCCTCAGAAAGACAGGAGGGCCATACCCGAGTTCTCAGCAGCCAGAAGCTaGTGTGCACGCGCTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: GQLPILNPQKDRRAIPEFSAARS*CARAPQ Trigger: CTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGA...GAACTCGGGTATGGCCCTCCTGTCTTTCTGAGGGTTTAGGATGGGGAGTTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGTGCTGGGCAGGATGGGTGCTTGGGATGCCAATaGGAAAAGCAAGCATGTGGA | + |
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Preference number: 2 (lower is better) Translates to: EGAQRPLLATGTCAGQDGCLGCQ*EKQACG Trigger: TCCACATGCTTGCTTTTCCCATTGGCATCCCAAGCA...CCCATCCTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGGAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGTGCTGGGCAGGATAGTAGGCCTTCGTaGTTGCATCAAACTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: WREGAQRPLLATGTCAGQDSRPS*LHQTPL Trigger: AAGAGGAGTTTGATGCAATCACGAAGGCCTACTATC...CTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTCCCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGCACAGTGCCGTTAACTaGACGGTGCAATTCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GLRSAARSWCARAPQGLLHSAVN*TVQFSF Trigger: AAAGCTGAATTGCACCGTGCAGTTAACGGCACTGTG...CAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGGAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGTGCTGGGCAGCTTGTTTTGCACCAGTaGGGTTGGTATATCTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: WREGAQRPLLATGTCAGQLVLHQ*GWYISN Trigger: GTTGGAGATATACCAACCGCACTGGTGCAAAACAAG...CTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTCCCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGGTGGAAGTTCAGAGTTTaGTCTCAGGTCAGCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: WQAGWCPAHTFPLLSHTGWKFRV*SQVSSQ Trigger: CTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCA...CCCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGAGTGGCAGCAAAACCTGTTTTTaGCATTTCCACTGGTGTCCG | + |
|
Preference number: 2 (lower is better) Translates to: RSAARSWCARAPQGLLSGSKTCF*HFHWCP Trigger: CGGACACCAGTGGAAATGTCAAAAACAGGTTTTGCT...GCCACTCAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACCACAGCCACCAGGATCCTCCAGAGGCAAGCAGCATCTCAGATTACAAGAGCACAGGCCTACTGCCTaGGCCAGGAGTCTGCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: SPQPPGSSRGKQHLRLQEHRPTA*ARSLHA Trigger: TGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTG...CTCTTGTAATCTGAGATGCTGCTTGCCTCTGGAGGATCCTGGTGGCTGTGGTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCTGACCACACAGATGATCCTGCCTGCTTGGGATGCCAATGGGAAAAGCAACTCCACAGGGCCTTCTaGGTGGCTGCAGGCTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TADHTDDPACLGCQWEKQLHRAF*VAAGCC Trigger: ACAGCAGCCTGCAGCCACTCAGAAGGCCCTGTGGAG...TTGCTTTTCCCATTGGCATCCCAAGCAGGCAGGATCATCTGTGTGGTCAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCAGGGCACAGGCCTACTGCCTGAGCCAGGAGTCTGCATGCACACCCCCACACCGCTTCCTCATTTTTaGTGCATGAATCATCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SQGTGLLPEPGVCMHTPTPLPHF*CMNHPA Trigger: TGCTGGATGATTCATGCATCAAAAATGAGGAAGCGG...TGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTGCCCTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCTACTGCCTGAGCCAGGAGTCTGCATGCACACCCCCACAGTCCGCACATCACGTACACTACAGCTGCTaGAAGGGTTTCTGGTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: AYCLSQESACTPPQSAHHVHYSC*KGFWFS Trigger: AGAGAACCAGAAACCCTTTCAGCAGCTGTAGTGTAC...GTGATGTGCGGACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCTACTGCCTGAGCCAGGAGTCTGCATGCACACCCCCACAGTCCGCACATCACCAAAGACCATCACTCTaGAAAGATGGTCCCCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: AYCLSQESACTPPQSAHHQRPSL*KDGPLQ Trigger: CTGAAGGGGACCATCTTTGCAGAGTGATGGTCTTTG...GTGATGTGCGGACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CAA 90 bp | CATCACTCTGCAAAGATGGTCCCCTTCAGCTTGGAAGTTCAGAGTTaGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: HHSAKMVPFSLEVQS*VSGQQPEAGVHALH Trigger: GTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAGCTGAAGGGGACCATCTTTGCAGAGTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGGAATTCTGGCCCAAGTaGCTTCTGACCGATGCATTA | + |
|
Preference number: 2 (lower is better) Translates to: LAGRLVPSSHVSPSFPYREFWPK*LLTDAL Trigger: TAATGCATCGGTCAGAAGTCACTTGGGCCAGAATTC...CCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCAACTCCCCATCCTAAACCCTCAGAAAGACAGGAGGGCCATACCCGAGTTCACAGATGATCCTGCCTaGTTGGGATGCCAATGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GQLPILNPQKDRRAIPEFTDDPA*LGCQWE Trigger: TTCCCATTGGCATCCCAAGCAGGCAGGATCATCTGT...GAACTCGGGTATGGCCCTCCTGTCTTTCTGAGGGTTTAGGATGGGGAGTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGGGAGGGCGCTCAGCGACCTCTGCTCGCAACAGGAACCTGTGCTGGGCAGCTTTTTCTCTCCAGCTaGAAATCGCTTCAAAAGATT | + |
|
Preference number: 2 (lower is better) Translates to: WREGAQRPLLATGTCAGQLFLSS*KSLQKI Trigger: AATCTTTTGAAGCGATTTCCAGCTGGAGAGAAAAAG...CTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTCCCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCATGTCAGAACAATGCTTaGCATCCCTCATGGTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: SSEFGLRSAARSWCARAPCQNNA*HPSWSI Trigger: GATGGACCATGAGGGATGGCAAGCATTGTTCTGACA...TGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | TTACTTAGAGCACAAAGGTCTGGTGGCCCAGAGTTCATAAACGTTACAGTCACAGCTTTCAGAGCGTGGTaGGAGGCCCACGACACACGC | + |
|
Preference number: 2 (lower is better) Translates to: LLRAQRSGGPEFINVTVTAFRAW*EAHDTR Trigger: GCGTGTGTCGTGGGCCTCTCACCACGCTCTGAAAGC...TGTGACTGTAACGTTTATGAACTCTGGGCCACCAGACCTTTGTGCTCTAAGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | CAACAGAAAAGTGGCAGTAACCAAGACTCTTTTGGCCGAATCAGTCTGCCATCTCACAGGCCTACTGCCTaGGCCAGGAGTCTGCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: QQKSGSNQDSFGRISLPSHRPTA*ARSLHA Trigger: TGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTG...AGATGGCAGACTGATTCGGCCAAAAGAGTCTTGGTTACTGCCACTTTTCTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | TTACTTAGAGCACAAAGGTCTGGTGGCCCAGAGTTCATAAACGTTACAGTCACAGCCCACACATCTCTCTaGGGTGCTCCCAGGGCACTC | + |
|
Preference number: 2 (lower is better) Translates to: LLRAQRSGGPEFINVTVTAHTSL*GAPRAL Trigger: GAGTGCCCTGGGAGCACCTCAGAGAGATGTGTGGGC...TGTGACTGTAACGTTTATGAACTCTGGGCCACCAGACCTTTGTGCTCTAAGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | TCACCACAGCCACCAGGATCCTCCAGAGGCAAGCAGCATCTCAGATTACAAGAGGAACTGACTAGAATCTaGATCCCCTTTCCCAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SPQPPGSSRGKQHLRLQEELTRI*IPFPRA Trigger: TGCCCTGGGAAAGGGGATGCAGATTCTAGTCAGTTC...CTCTTGTAATCTGAGATGCTGCTTGCCTCTGGAGGATCCTGGTGGCTGTGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACAGAAAAGTGGCAGTAACCAAGACTCTTTTGGCCGAATCAGTCTGCCATCTCCCTTGTGGGCTCCCTaGAGCCCACACATCTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QQKSGSNQDSFGRISLPSPLWAP*SPHISL Trigger: CAGAGAGATGTGTGGGCTGCAGGGAGCCCACAAGGG...AGATGGCAGACTGATTCGGCCAAAAGAGTCTTGGTTACTGCCACTTTTCTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CAA 90 bp | ATCAGGACCAAAGACCATCACTCTGCAAAGATGGTCCCCTTCAGCTaGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: IRTKDHHSAKMVPFS*EVQSLVSGQQPEAG Trigger: ACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAGCTGAAGGGGACCATCTTTGCAGAGTGATGGTCTTTGGTCCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | CAACAGAAAAGTGGCAGTAACCAAGACTCTTTTGGCCGAATCAGTCTGCCATCTTTGCACGAGTACCTCTaGCAACACACACACCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: QQKSGSNQDSFGRISLPSLHEYL*QHTHQG Trigger: GCCCTGGTGTGTGTGTTGTCAGAGGTACTCGTGCAA...AGATGGCAGACTGATTCGGCCAAAAGAGTCTTGGTTACTGCCACTTTTCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGTATATGGGCTGTTTTATAAACTATCTCCTTCTTAGGCCGAGACTGCAGTGGGCGCTGGCTACCTaGGCATTTCAGACCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: CMYMGCFINYLLLRPRLQWALAT*AFQTLL Trigger: CAGCAGGGTCTGAAATGCCCAGGTAGCCAGCGCCCA...CTGCAGTCTCGGCCTAAGAAGGAGATAGTTTATAAAACAGCCCATATACATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CAA 90 bp | ACTGAACATTCCAGAAAAGCTCGACGCCCAGTGTCAGAACAATGCTaGCCATCCCTCATGGTCCATCAGGGTAAAATGGTTACCGATGTA | + |
|
Preference number: 2 (lower is better) Translates to: TEHSRKARRPVSEQC*PSLMVHQGKMVTDV Trigger: TACATCGGTAACCATTTTACCCTGATGGACCATGAGGGATGGCAAGCATTGTTCTGACACTGGGCGTCGAGCTTTTCTGGAATGTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CAA 90 bp | TGCATGAATCATCCAGCAGATCGATCTTGTTTTGCACCAGTGCGGTaGGTATATCTCCAACCTCCGCTACTACTTTTTCTCTCCAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CMNHPADRSCFAPVR*VYLQPPLLLFLSSW Trigger: CCAGCTGGAGAGAAAAAGTAGTAGCGGAGGTTGGAGATATACCAACCGCACTGGTGCAAAACAAGATCGATCTGCTGGATGATTCATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGAAACGGCAGCCATCACCAGACACTGTTTTAAAGAGACAGACCACACACCTCACAGTGCCGTTAACTaGACGGTGCAATTCAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: KETAAITRHCFKETDHTPHSAVN*TVQFSF Trigger: AAAGCTGAATTGCACCGTGCAGTTAACGGCACTGTG...AGGTGTGTGGTCTGTCTCTTTAAAACAGTGTCTGGTGATGGCTGCCGTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACAGAAAAGTGGCAGTAACCAAGACTCTTTTGGCCGAATCAGTCTGCCATCTACAGATGATCCTGCCTaGTTGGGATGCCAATGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: QQKSGSNQDSFGRISLPSTDDPA*LGCQWE Trigger: TTCCCATTGGCATCCCAAGCAGGCAGGATCATCTGT...AGATGGCAGACTGATTCGGCCAAAAGAGTCTTGGTTACTGCCACTTTTCTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGTATATGGGCTGTTTTATAAACTATCTCCTTCTTAGGCCGAGACTGCAGCACATCTCTCTGAGGTaGTCCCAGGGCACTCACCAC | + |
|
Preference number: 2 (lower is better) Translates to: CMYMGCFINYLLLRPRLQHISLR*SQGTHH Trigger: GTGGTGAGTGCCCTGGGAGCACCTCAGAGAGATGTG...CTGCAGTCTCGGCCTAAGAAGGAGATAGTTTATAAAACAGCCCATATACATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
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| 3UTR CAA 90 bp | TCCGCTTCCTCATTTTTGATGCATGAATCATCCAGCAGATCGATCTaGTTTTGCACCAGTGCGGTTGGTATATCTCCAACCTCCGCTACT | + |
|
Preference number: 2 (lower is better) Translates to: SASSFLMHESSSRSI*FCTSAVGISPTSAT Trigger: AGTAGCGGAGGTTGGAGATATACCAACCGCACTGGTGCAAAACAAGATCGATCTGCTGGATGATTCATGCATCAAAAATGAGGAAGCGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR CAA 90 bp | GGGTACACTACAGCTGCTGAAAGGGTTTCTGGTTCTCTTGGTCCTTaGTTTGTTAGGTCTAAGGTTGATGACATCGCCACCATTAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GYTTAAERVSGSLGP*FVRSKVDDIATIKG Trigger: TCCCTTAATGGTGGCGATGTCATCAACCTTAGACCTAACAAACAAAGGACCAAGAGAACCAGAAACCCTTTCAGCAGCTGTAGTGTACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCTGACCACACAGATGATCCTGCCTGCTTGGGATGCCAATGGGAAAAGCAAAATCTTGTTACTACTTaGGTGTGTCTGTTCTGGATC | + |
|
Preference number: 2 (lower is better) Translates to: TADHTDDPACLGCQWEKQNLVTT*VCLFWI Trigger: GATCCAGAACAGACACACTCAAGTAGTAACAAGATT...TTGCTTTTCCCATTGGCATCCCAAGCAGGCAGGATCATCTGTGTGGTCAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTAGAGCACAAAGGTCTGGTGGCCCAGAGTTCATAAACGTTACAGTCACAGAACTGACTAGAATCTaGATCCCCTTTCCCAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLRAQRSGGPEFINVTVTELTRI*IPFPRA Trigger: TGCCCTGGGAAAGGGGATGCAGATTCTAGTCAGTTC...TGTGACTGTAACGTTTATGAACTCTGGGCCACCAGACCTTTGTGCTCTAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACAGAAAAGTGGCAGTAACCAAGACTCTTTTGGCCGAATCAGTCTGCCATCTCAAAGACCATCACTCTaGAAAGATGGTCCCCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: QQKSGSNQDSFGRISLPSQRPSL*KDGPLQ Trigger: CTGAAGGGGACCATCTTTGCAGAGTGATGGTCTTTG...AGATGGCAGACTGATTCGGCCAAAAGAGTCTTGGTTACTGCCACTTTTCTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTTTGTTTACCTGTGTGCAGACAGCTTCATTTGTATGATGTATTTTTCAGCACAGGGCCTTCTGAGTaGCTGCAGGCTGCTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GFCLPVCRQLHLYDVFFSTGPSE*LQAAVC Trigger: ACACACAGCAGCCTGCAGCCACTCAGAAGGCCCTGT...GCTGAAAAATACATCATACAAATGAAGCTGTCTGCACACAGGTAAACAAAACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACTTAGAGCACAAAGGTCTGGTGGCCCAGAGTTCATAAACGTTACAGTCACAATGATCCTGCCTGCTTaGGATGCCAATGGGAAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLRAQRSGGPEFINVTVTMILPA*DANGKS Trigger: GCTTTTCCCATTGGCATCCCAAGCAGGCAGGATCAT...TGTGACTGTAACGTTTATGAACTCTGGGCCACCAGACCTTTGTGCTCTAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTTTGTTTACCTGTGTGCAGACAGCTTCATTTGTATGATGTATTTTTCAGCTTGCACGAGTACCTCTaGCAACACACACACCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GFCLPVCRQLHLYDVFFSLHEYL*QHTHQG Trigger: GCCCTGGTGTGTGTGTTGTCAGAGGTACTCGTGCAA...GCTGAAAAATACATCATACAAATGAAGCTGTCTGCACACAGGTAAACAAAACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTAGAGCACAAAGGTCTGGTGGCCCAGAGTTCATAAACGTTACAGTCACACACAGTGCCGTTAACTaGACGGTGCAATTCAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLRAQRSGGPEFINVTVTHSAVN*TVQFSF Trigger: AAAGCTGAATTGCACCGTGCAGTTAACGGCACTGTG...TGTGACTGTAACGTTTATGAACTCTGGGCCACCAGACCTTTGTGCTCTAAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACTTAGAGCACAAAGGTCTGGTGGCCCAGAGTTCATAAACGTTACAGTCACAAGCACAAAGGTCTGGTaGCCCAGAGTTCATAAACGT | + |
|
Preference number: 2 (lower is better) Translates to: LLRAQRSGGPEFINVTVTSTKVW*PRVHKR Trigger: ACGTTTATGAACTCTGGGCCACCAGACCTTTGTGCT...TGTGACTGTAACGTTTATGAACTCTGGGCCACCAGACCTTTGTGCTCTAAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CAA 90 bp | AAAGGGTTTCTGGTTCTCTTGGTCCTTTGTTTGTTAGGTCTAAGGTaGATGACATCGCCACCATTAAGGGAACTTGAATTCTGGCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: KGFLVLLVLCLLGLR*MTSPPLRELEFWPK Trigger: CTTGGGCCAGAATTCAAGTTCCCTTAATGGTGGCGATGTCATCAACCTTAGACCTAACAAACAAAGGACCAAGAGAACCAGAAACCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTAGAGCACAAAGGTCTGGTGGCCCAGAGTTCATAAACGTTACAGTCACAGTGACTAAAGCCATCTaGTCACCTAAGGCTATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLRAQRSGGPEFINVTVTVTKAI*SPKAME Trigger: TTCCATAGCCTTAGGTGAGCAGATGGCTTTAGTCAC...TGTGACTGTAACGTTTATGAACTCTGGGCCACCAGACCTTTGTGCTCTAAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGTATATGGGCTGTTTTATAAACTATCTCCTTCTTAGGCCGAGACTGCAGGCACATTGCTTACAGTaGCTATGGAGAAGGCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CMYMGCFINYLLLRPRLQAHCLQ*LWRRLW Trigger: CCAGAGCCTTCTCCATAGCCACTGTAAGCAATGTGC...CTGCAGTCTCGGCCTAAGAAGGAGATAGTTTATAAAACAGCCCATATACATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGTATATGGGCTGTTTTATAAACTATCTCCTTCTTAGGCCGAGACTGCAGTGGAAGTTCAGAGTTTaGTCTCAGGTCAGCAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: CMYMGCFINYLLLRPRLQWKFRV*SQVSSQ Trigger: CTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCA...CTGCAGTCTCGGCCTAAGAAGGAGATAGTTTATAAAACAGCCCATATACATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTATGTATATGGGCTGTTTTATAAACTATCTCCTTCTTAGGCCGAGACTGCAGAGCAAAACCTGTTTTTaGCATTTCCACTGGTGTCCG | + |
|
Preference number: 2 (lower is better) Translates to: CMYMGCFINYLLLRPRLQSKTCF*HFHWCP Trigger: CGGACACCAGTGGAAATGTCAAAAACAGGTTTTGCT...CTGCAGTCTCGGCCTAAGAAGGAGATAGTTTATAAAACAGCCCATATACATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTATGTATATGGGCTGTTTTATAAACTATCTCCTTCTTAGGCCGAGACTGCAGGTGACTAAAGCCATCTaGTCACCTAAGGCTATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CMYMGCFINYLLLRPRLQVTKAI*SPKAME Trigger: TTCCATAGCCTTAGGTGAGCAGATGGCTTTAGTCAC...CTGCAGTCTCGGCCTAAGAAGGAGATAGTTTATAAAACAGCCCATATACATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTTTGTTTACCTGTGTGCAGACAGCTTCATTTGTATGATGTATTTTTCAGCGAGACTGCAGAAACCTaGGGAACTCTTAGATATAGC | + |
|
Preference number: 2 (lower is better) Translates to: GFCLPVCRQLHLYDVFFSETAET*GTLRYS Trigger: GCTATATCTAAGAGTTCCTCAGGTTTCTGCAGTCTC...GCTGAAAAATACATCATACAAATGAAGCTGTCTGCACACAGGTAAACAAAACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGTATATGGGCTGTTTTATAAACTATCTCCTTCTTAGGCCGAGACTGCAGTATGGTCACCTTGAGTaGAGAAGAAACAGTTCAACC | + |
|
Preference number: 2 (lower is better) Translates to: CMYMGCFINYLLLRPRLQYGHLE*RRNSST Trigger: GGTTGAACTGTTTCTTCTCCACTCAAGGTGACCATA...CTGCAGTCTCGGCCTAAGAAGGAGATAGTTTATAAAACAGCCCATATACATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | TTACTTAGAGCACAAAGGTCTGGTGGCCCAGAGTTCATAAACGTTACAGTCACATGCTTTTATTTGAACTaGTGTATGTATATGGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LLRAQRSGGPEFINVTVTCFYLN*CMYMGC Trigger: ACAGCCCATATACATACAGCAGTTCAAATAAAAGCA...TGTGACTGTAACGTTTATGAACTCTGGGCCACCAGACCTTTGTGCTCTAAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGTTTTGTTTACCTGTGTGCAGACAGCTTCATTTGTATGATGTATTTTTCAGCTGCTTTTATTTGAACTaGTGTATGTATATGGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GFCLPVCRQLHLYDVFFSCFYLN*CMYMGC Trigger: ACAGCCCATATACATACAGCAGTTCAAATAAAAGCA...GCTGAAAAATACATCATACAAATGAAGCTGTCTGCACACAGGTAAACAAAACCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR GCA 72 bp | GTGGACCACCATGGAGGGAGGGCGCTCAGCGACCTCTaGTCGCAACAGGAACCTGTGCTGGGCAGGATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VDHHGGRALSDL*SQQEPVLGRMG Trigger: ACCCATCCTGCCCAGCACAGGTTCCTGTTGCGAGCAGAGGTCGCTGAGCGCCCTCCCTCCATGGTGGTCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR TCA 72 bp | TCTGCATCCCCTTTCCCAGGGCACAGGCCTACTGCCTaGGCCAGGAGTCTGCATGCACACCCCCACAGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: SASPFPGHRPTA*ARSLHAHPHSP Trigger: CGGACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTGCCCTGGGAAAGGGGATGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR TCA 72 bp | CCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTaGGTGGCTGCAGGCTGCTGTGTGTACCGGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: PEAGVHALHRAF*VAAGCCVYRAH Trigger: ATGTGCCCGGTACACACAGCAGCCTGCAGCCACTCAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR GCA 72 bp | TCCCAGGGCACAGGCCTACTGCCTGAGCCAGGAGTCTaGATGCACACCCCCACAGTCCGCACATCACGGATA | + |
|
Preference number: 3 (lower is better) Translates to: SQGTGLLPEPGV*MHTPTVRTSRI Trigger: TATCCGTGATGTGCGGACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTGCCCTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR GCA 72 bp | GCTATGGAAGCCAAAGCTCTGCCCTTGTGGGCTCCCTaGAGCCCACACATCTCTCTGAGGTGCTCCCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: AMEAKALPLWAP*SPHISLRCSQG Trigger: GCCCTGGGAGCACCTCAGAGAGATGTGTGGGCTGCAGGGAGCCCACAAGGGCAGAGCTTTGGCTTCCATAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | AAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGAGTaGCTGCAGGCTGCTGTGTGTACCGGGCACATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KLVCTRSTGPSE*LQAAVCTGHIA Trigger: AGCAATGTGCCCGGTACACACAGCAGCCTGCAGCCACTCAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR GCA 72 bp | AGAATCTGCATCCCCTTTCCCAGGGCACAGGCCTACTaGCTGAGCCAGGAGTCTGCATGCACACCCCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: RICIPFPRAQAY*LSQESACTPPQ Trigger: CTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTGCCCTGGGAAAGGGGATGCAGATTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR GCA 72 bp | AGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTaGACGCGCTCCACAGGGCCTTCTGAGTGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVWSQVSSQKLV*TRSTGPSEWLQ Trigger: CTGCAGCCACTCAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | CGGGCACATTGCTTACAGTGGCTATGGAGAAGGCTCTaGGAGAATCCCAGGAGGGACAGGCCCGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RAHCLQWLWRRL*ENPRRDRPEQS Trigger: TGACTGCTCGGGCCTGTCCCTCCTGGGATTCTCCCAGAGCCTTCTCCATAGCCACTGTAAGCAATGTGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | AGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTaGTGTGCACGCGCTCCACAGGGCCTTCTGAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSEFGLRSAARS*CARAPQGLLSG Trigger: GCCACTCAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | TGCCTGCTTGGGATGCCAATGGGAAAAGCAAGCATGTaGACCACCATGGAGGGAGGGCGCTCAGCGACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLLGMPMGKASM*TTMEGGRSATS Trigger: AGAGGTCGCTGAGCGCCCTCCCTCCATGGTGGTCCACATGCTTGCTTTTCCCATTGGCATCCCAAGCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGTTGGAAGTTCAGAGTTaGGTCTCAGGTCAGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GLRSAARSWCARAPQGLLLEVQS*VSGQQP Trigger: TGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAA...CAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | GCAGGCTGCTGTGTGTACCGGGCACATTGCTTACAGTaGCTATGGAGAAGGCTCTGGGAGAATCCCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGCCVYRAHCLQ*LWRRLWENPRR Trigger: CCTCCTGGGATTCTCCCAGAGCCTTCTCCATAGCCACTGTAAGCAATGTGCCCGGTACACACAGCAGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGCAGCAAAACCTGTTTTaGACATTTCCACTGGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GLRSAARSWCARAPQGLLQQNLF*TFPLVS Trigger: GGACACCAGTGGAAATGTCAAAAACAGGTTTTGCTG...CAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGATGGTCCCCTTCAGCTaGGAAGTTCAGAGTTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LAGRLVPSSHVSPSFPYRMVPFS*EVQSLV Trigger: GACCAAACTCTGAACTTCCAAGCTGAAGGGGACCAT...CCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGAGTGGCGGGTTTCTGGTTCTCTaGGTCCTTTGTTTGTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSAARSWCARAPQGLLSGGFLVL*VLCLLG Trigger: ACCTAACAAACAAAGGACCAAGAGAACCAGAAACCC...GCCACTCAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR GCA 72 bp | GCAATGGTTGTACGAGCGAGCGAACTGACTAGAATCTaGATCCCCTTTCCCAGGGCACAGGCCTACTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AMVVRASELTRI*IPFPRAQAYCL Trigger: CAGGCAGTAGGCCTGTGCCCTGGGAAAGGGGATGCAGATTCTAGTCAGTTCGCTCGCTCGTACAACCATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | TGCTGTGTGTACCGGGCACATTGCTTACAGTGGCTATaGAGAAGGCTCTGGGAGAATCCCAGGAGGGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: CCVYRAHCLQWL*RRLWENPRRDR Trigger: CCTGTCCCTCCTGGGATTCTCCCAGAGCCTTCTCCATAGCCACTGTAAGCAATGTGCCCGGTACACACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | TGGCCGAATCAGTCTGCCATCTGGGCGCTGGCTACCTaGGCATTTCAGACCCTGCTGGGGTTTTGTTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: WPNQSAIWALAT*AFQTLLGFCLP Trigger: AGGTAAACAAAACCCCAGCAGGGTCTGAAATGCCCAGGTAGCCAGCGCCCAGATGGCAGACTGATTCGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGGAAGGATGCCTTAGAGTaGCAGGGCTTCAGAAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: WQAGWCPAHTFPLLSHTGKDALE*QGFRKS Trigger: AGATTTTCTGAAGCCCTGCAACTCTAAGGCATCCTT...CCCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR TCA 72 bp | GCACACAAGCCTGGGCTCCTCGATAGTAGGCCTTCGTaGTTGCATCAAACTCCTCTTGACCTGCAGTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AHKPGLLDSRPS*LHQTPLDLQCP Trigger: GGGACACTGCAGGTCAAGAGGAGTTTGATGCAATCACGAAGGCCTACTATCGAGGAGCCCAGGCTTGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | GACCACACAGATGATCCTGCCTGCTTGGGATGCCAATaGGAAAAGCAAGCATGTGGACCACCATGGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DHTDDPACLGCQ*EKQACGPPWRE Trigger: CTCCCTCCATGGTGGTCCACATGCTTGCTTTTCCCATTGGCATCCCAAGCAGGCAGGATCATCTGTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGCAGCAAAACCTGTTTTaGACATTTCCACTGGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LAGRLVPSSHVSPSFPYRQQNLF*TFPLVS Trigger: GGACACCAGTGGAAATGTCAAAAACAGGTTTTGCTG...CCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | CAAAGATGGTCCCCTTCAGCTTGGAAGTTCAGAGTTTaGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACG | + |
|
Preference number: 3 (lower is better) Translates to: QRWSPSAWKFRV*SQVSSQKLVCT Trigger: CGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAGCTGAAGGGGACCATCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCATGGTCCCCTTCAGCTaGGAAGTTCAGAGTTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGSSEFGLRSAARSWCARMVPFS*EVQSLV Trigger: GACCAAACTCTGAACTTCCAAGCTGAAGGGGACCAT...GCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR TCA 72 bp | CAGAAACATACGCAATGGTTGTACGAGCGAGCGAACTaGCTAGAATCTGCATCCCCTTTCCCAGGGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QKHTQWLYERAN*LESASPFPGHR Trigger: CCTGTGCCCTGGGAAAGGGGATGCAGATTCTAGTCAGTTCGCTCGCTCGTACAACCATTGCGTATGTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTGACCACACAGATGATCCTGCCTGCTTGGGATGCCAATGGGAAAAGCAATTTGCACCAGTGCGGTaGGTATATCTCCAACCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: TADHTDDPACLGCQWEKQFAPVR*VYLQPP Trigger: CGGAGGTTGGAGATATACCAACCGCACTGGTGCAAA...TTGCTTTTCCCATTGGCATCCCAAGCAGGCAGGATCATCTGTGTGGTCAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGGTTAAAGACACCAATCTaGTTACTACTTGAGTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: WQAGWCPAHTFPLLSHTGLKTPI*LLLECV Trigger: GACACACTCAAGTAGTAACAAGATTGGTGTCTTTAA...CCCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCCAGCAAAACCTGTTTTaGACATTTCCACTGGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGSSEFGLRSAARSWCARQQNLF*TFPLVS Trigger: GGACACCAGTGGAAATGTCAAAAACAGGTTTTGCTG...GCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCAACTCCCCATCCTAAACCCTCAGAAAGACAGGAGGGCCATACCCGAGTTCATGTGTATGGTCACCTaGAGTGGAGAAGAAACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GQLPILNPQKDRRAIPEFMCMVT*SGEETV Trigger: AACTGTTTCTTCTCCACTCAAGGTGACCATACACAT...GAACTCGGGTATGGCCCTCCTGTCTTTCTGAGGGTTTAGGATGGGGAGTTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATCCCAGGAGGGACAGGCCCGAGCAGTCAGACATTTACATTCCTTTCATCTGTGTCAGAACAATGCTaGCCATCCCTCATGGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RIPGGTGPSSQTFTFLSSVSEQC*PSLMVH Trigger: ATGGACCATGAGGGATGGCAAGCATTGTTCTGACAC...AGATGAAAGGAATGTAAATGTCTGACTGCTCGGGCCTGTCCCTCCTGGGATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTTTGTTTACCTGTGTGCAGACAGCTTCATTTGTATGATGTATTTTTCAGCGCCAAAGCTCTGCCCTaGTGGGCTCCCTGCAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GFCLPVCRQLHLYDVFFSAKALP*WAPCSP Trigger: TGGGCTGCAGGGAGCCCACAAGGGCAGAGCTTTGGC...GCTGAAAAATACATCATACAAATGAAGCTGTCTGCACACAGGTAAACAAAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCCTCTTGGTCCTTTGTTaGTTAGGTCTAAGGTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: LGSSEFGLRSAARSWCARLLVLC*LGLRLM Trigger: CATCAACCTTAGACCTAACAAACAAAGGACCAAGAG...GCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR GCA 72 bp | CATTCCAGAAAAGCTCGACGCCCAGTGTCAGAACAATaGTTGCCATCCCTCATGGTCCATCAGGGTAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: HSRKARRPVSEQ*LPSLMVHQGKM Trigger: CATTTTACCCTGATGGACCATGAGGGATGGCAAGCATTGTTCTGACACTGGGCGTCGAGCTTTTCTGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTGACCACACAGATGATCCTGCCTGCTTGGGATGCCAATGGGAAAAGCAAAAGGATGCCTTAGAGTaGCAGGGCTTCAGAAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: TADHTDDPACLGCQWEKQKDALE*QGFRKS Trigger: AGATTTTCTGAAGCCCTGCAACTCTAAGGCATCCTT...TTGCTTTTCCCATTGGCATCCCAAGCAGGCAGGATCATCTGTGTGGTCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR TCA 72 bp | ACGAGTACCTCTGACAACACACACACCAGGGCAGTCTaGCATAGTCCGGGTTTCCCTTCCATATGTTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: TSTSDNTHTRAV*HSPGFPSICSL Trigger: TAAAGAACATATGGAAGGGAAACCCGGACTATGTCAGACTGCCCTGGTGTGTGTGTTGTCAGAGGTACTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGAAAAGTGGCAGTAACCAAGACTCTTTTGGCCGAATCAGTCTGCCATCTGTGTCAGAACAATGCTaGCCATCCCTCATGGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: QQKSGSNQDSFGRISLPSVSEQC*PSLMVH Trigger: ATGGACCATGAGGGATGGCAAGCATTGTTCTGACAC...AGATGGCAGACTGATTCGGCCAAAAGAGTCTTGGTTACTGCCACTTTTCTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR GCA 72 bp | CAGAAAATCTGTGATCAGGACCAAAGACCATCACTCTaGAAAGATGGTCCCCTTCAGCTTGGAAGTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QKICDQDQRPSL*KDGPLQLGSSE Trigger: CTCTGAACTTCCAAGCTGAAGGGGACCATCTTTGCAGAGTGATGGTCTTTGGTCCTGATCACAGATTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR GCA 72 bp | TTGATGCATGAATCATCCAGCAGATCGATCTTGTTTTaGACCAGTGCGGTTGGTATATCTCCAACCTCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: LMHESSSRSILF*TSAVGISPTSA Trigger: AGCGGAGGTTGGAGATATACCAACCGCACTGGTGCAAAACAAGATCGATCTGCTGGATGATTCATGCATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR TCA 72 bp | GGGTTTCCCTTCCATATGTTCTTTAAGCATTCAGACTaGACATTCCAGAAAAGCTCGACGCCCAGTGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GFPFHMFFKHSD*TFQKSSTPSVR Trigger: TCTGACACTGGGCGTCGAGCTTTTCTGGAATGTTCAGTCTGAATGCTTAAAGAACATATGGAAGGGAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR TCA 72 bp | TCGCCACCATTAAGGGAACTTGAATTCTGGCCCAAGTaGCTTCTGACCGATGCATTAAAGACACCAATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPPLRELEFWPK*LLTDALKTPIL Trigger: CAAGATTGGTGTCTTTAATGCATCGGTCAGAAGTCACTTGGGCCAGAATTCAAGTTCCCTTAATGGTGGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR TCA 72 bp | TCTAAGGTTGATGACATCGCCACCATTAAGGGAACTTaGATTCTGGCCCAAGTGACTTCTGACCGATGCATT | + |
|
Preference number: 3 (lower is better) Translates to: SKVDDIATIKGT*ILAQVTSDRCI Trigger: AATGCATCGGTCAGAAGTCACTTGGGCCAGAATTCAAGTTCCCTTAATGGTGGCGATGTCATCAACCTTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | AATGAGTTTTTAGTAGAACTCATGATATTATCTCTTTaGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: NEFLVELMILSL*QAGWCPAHTFP Trigger: GGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCAAAGAGATAATATCATGAGTTCTACTAAAAACTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | TCCCATAACATTAGCCTTACATCTTCATCGTTAACCTaGCTGGCATGGTTAGACGGCACAGCTGTTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SHNISLTSSSLT*LAWLDGTAVSL Trigger: AAGAGAAACAGCTGTGCCGTCTAACCATGCCAGCCAGGTTAACGATGAAGATGTAAGGCTAATGTTATGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | ATCCAGCAGATCGATCTTGTTTTGCACCAGTGCGGTTaGTATATCTCCAACCTCCGCTACTACTTTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: IQQIDLVLHQCG*YISNLRYYFFS Trigger: AGAGAAAAAGTAGTAGCGGAGGTTGGAGATATACCAACCGCACTGGTGCAAAACAAGATCGATCTGCTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR TCA 72 bp | TTAGCCTTTTGGCCAGTCCCTCCGCTTCCTCATTTTTaGTGCATGAATCATCCAGCAGATCGATCTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LAFWPVPPLPHF*CMNHPADRSCF Trigger: AAAACAAGATCGATCTGCTGGATGATTCATGCATCAAAAATGAGGAAGCGGAGGGACTGGCCAAAAGGCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR TCA 72 bp | TCCTCCATGAAACAGTTTAGGGTACACTACAGCTGCTaGAAGGGTTTCTGGTTCTCTTGGTCCTTTGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSMKQFRVHYSC*KGFWFSWSFVC Trigger: ACAAACAAAGGACCAAGAGAACCAGAAACCCTTTCAGCAGCTGTAGTGTACCCTAAACTGTTTCATGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACAGAAAAGTGGCAGTAACCAAGACTCTTTTGGCCGAATCAGTCTGCCATCTCAATCTTGTTACTACTaGAGTGTGTCTGTTCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QQKSGSNQDSFGRISLPSQSCYY*SVSVLD Trigger: ATCCAGAACAGACACACTCAAGTAGTAACAAGATTG...AGATGGCAGACTGATTCGGCCAAAAGAGTCTTGGTTACTGCCACTTTTCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR CCA 72 bp | AGTAGTGTAAAAATTAGCGGTAGTGTTTGGCACACTTaGGTCCAAGTTCTTTCTGTAAAGTATGTCCGGACG | + |
|
Preference number: 3 (lower is better) Translates to: SSVKISGSVWHT*VQVLSVKYVRT Trigger: CGTCCGGACATACTTTACAGAAAGAACTTGGACCCAAGTGTGCCAAACACTACCGCTAATTTTTACACTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGTATATGGGCTGTTTTATAAACTATCTCCTTCTTAGGCCGAGACTGCAGTCCGCTTCCTCATTTTaGATGCATGAATCATCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CMYMGCFINYLLLRPRLQSASSF*MHESSS Trigger: GCTGGATGATTCATGCATCAAAAATGAGGAAGCGGA...CTGCAGTCTCGGCCTAAGAAGGAGATAGTTTATAAAACAGCCCATATACATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGAGTAGCGCTGAATCATaGTCGACTTTCCAACCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLRSAARSWCARAPQGLLSSAES*STFQPP Trigger: GGGCGGTTGGAAAGTCGAGCATGATTCAGCGCTACT...CAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGAGTGGCAGTAGCGCTGAATCATaGTCGACTTTCCAACCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSAARSWCARAPQGLLSGSSAES*STFQPP Trigger: GGGCGGTTGGAAAGTCGAGCATGATTCAGCGCTACT...GCCACTCAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGGGCACAGGCCTACTGCCTGAGCCAGGAGTCTGCATGCACACCCCCACAGATAGTAGGCCTTCGTaGTTGCATCAAACTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQGTGLLPEPGVCMHTPTDSRPS*LHQTPL Trigger: AAGAGGAGTTTGATGCAATCACGAAGGCCTACTATC...TGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTGCCCTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGAGTGGCCCGCTTCCTCATTTTTaGTGCATGAATCATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSAARSWCARAPQGLLSGPLPHF*CMNHPA Trigger: TGCTGGATGATTCATGCATCAAAAATGAGGAAGCGG...GCCACTCAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGGGTACACTACAGCTGCTaGAAGGGTTTCTGGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WQAGWCPAHTFPLLSHTGVHYSC*KGFWFS Trigger: AGAGAACCAGAAACCCTTTCAGCAGCTGTAGTGTAC...CCCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR GCA 90 bp | CTTGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCAGTAGCGCTGAATCATaGTCGACTTTCCAACCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSSEFGLRSAARSWCARSSAES*STFQPP Trigger: GGGCGGTTGGAAAGTCGAGCATGATTCAGCGCTACT...GCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| 3UTR CAA 72 bp | GCAAAGATGGTCCCCTTCAGCTTGGAAGTTCAGAGTTaGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKMVPFSLEVQS*VSGQQPEAGVH Trigger: GTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAGCTGAAGGGGACCATCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAACTCCCCATCCTAAACCCTCAGAAAGACAGGAGGGCCATACCCGAGTTCGTACACTACAGCTGCTaGAAGGGTTTCTGGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQLPILNPQKDRRAIPEFVHYSC*KGFWFS Trigger: AGAGAACCAGAAACCCTTTCAGCAGCTGTAGTGTAC...GAACTCGGGTATGGCCCTCCTGTCTTTCTGAGGGTTTAGGATGGGGAGTTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGAGCCAGGAGTCTGCATGCACACCCCCACAGTCCGCACATCACGGATATCTTGTAGTCTTTTGTaGAAATGCCTTTGCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPEPGVCMHTPTVRTSRISCSLL*KCLCSS Trigger: GCTACTGCAAAGGCATTTTCACAAAAGACTACAAGA...TATCCGTGATGTGCGGACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCAGGCAGGCTGGTGCCCAGCTCACACGTTTCCCCTTCTTTCCCATACCGGTCTTGTAGTCTTTTGTaGAAATGCCTTTGCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGRLVPSSHVSPSFPYRSCSLL*KCLCSS Trigger: GCTACTGCAAAGGCATTTTCACAAAAGACTACAAGA...CCGGTATGGGAAAGAAGGGGAAACGTGTGAGCTGGGCACCAGCCTGCCTGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGATAGTAGGCCTTCGTaGTTGCATCAAACTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSSEFGLRSAARSWCARDSRPS*LHQTPL Trigger: AAGAGGAGTTTGATGCAATCACGAAGGCCTACTATC...GCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR TCA 90 bp | CTTGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCCCGCTTCCTCATTTTTaGTGCATGAATCATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSSEFGLRSAARSWCARPLPHF*CMNHPA Trigger: TGCTGGATGATTCATGCATCAAAAATGAGGAAGCGG...GCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR GCA 90 bp | CTTGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCCTTGTTTTGCACCAGTaGGGTTGGTATATCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGSSEFGLRSAARSWCARLVLHQ*GWYISN Trigger: GTTGGAGATATACCAACCGCACTGGTGCAAAACAAG...GCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| 3UTR CAA 72 bp | AGTGACAACAGAAAAGTGGCAGTAACCAAGACTCTTTaGGCCGAATCAGTCTGCCATCTGGGCGCTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SDNRKVAVTKTL*AESVCHLGAGY Trigger: GTAGCCAGCGCCCAGATGGCAGACTGATTCGGCCAAAAGAGTCTTGGTTACTGCCACTTTTCTGTTGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCAAATCTTGTTACTACTTaGGTGTGTCTGTTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSEFGLRSAARSWCARAPNLVTT*VCLFWI Trigger: GATCCAGAACAGACACACTCAAGTAGTAACAAGATT...TGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR TCA 90 bp | CATTCTGAGGAGCACAGCAGAGCAGCGTTACAATGTCAGCTTTCAGAGCGTGGTGAATTCTGGCCCAAGTaGCTTCTGACCGATGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: HSEEHSRAALQCQLSERGEFWPK*LLTDAL Trigger: TAATGCATCGGTCAGAAGTCACTTGGGCCAGAATTC...ACCACGCTCTGAAAGCTGACATTGTAACGCTGCTCTGCTGTGCTCCTCAGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| 3UTR CAA 72 bp | AAAGACCATCACTCTGCAAAGATGGTCCCCTTCAGCTaGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KDHHSAKMVPFS*EVQSLVSGQQP Trigger: TGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAGCTGAAGGGGACCATCTTTGCAGAGTGATGGTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCCTTTTTCTCTCCAGCTaGAAATCGCTTCAAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LGSSEFGLRSAARSWCARLFLSS*KSLQKI Trigger: AATCTTTTGAAGCGATTTCCAGCTGGAGAGAAAAAG...GCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| 3UTR CAA 72 bp | CATCCAGCAGATCGATCTTGTTTTGCACCAGTGCGGTaGGTATATCTCCAACCTCCGCTACTACTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPADRSCFAPVR*VYLQPPLLLFL Trigger: GAGAAAAAGTAGTAGCGGAGGTTGGAGATATACCAACCGCACTGGTGCAAAACAAGATCGATCTGCTGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR CAA 72 bp | TTTAGCCTTTTGGCCAGTCCCTCCGCTTCCTCATTTTaGATGCATGAATCATCCAGCAGATCGATCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSLLASPSASSF*MHESSSRSILF Trigger: AAACAAGATCGATCTGCTGGATGATTCATGCATCAAAAATGAGGAAGCGGAGGGACTGGCCAAAAGGCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR CAA 72 bp | GGTACACTACAGCTGCTGAAAGGGTTTCTGGTTCTCTaGGTCCTTTGTTTGTTAGGTCTAAGGTTGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: GTLQLLKGFLVL*VLCLLGLRLMT Trigger: TGTCATCAACCTTAGACCTAACAAACAAAGGACCAAGAGAACCAGAAACCCTTTCAGCAGCTGTAGTGTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR CAA 72 bp | TCATTTTTGATGCATGAATCATCCAGCAGATCGATCTaGTTTTGCACCAGTGCGGTTGGTATATCTCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SFLMHESSSRSI*FCTSAVGISPT Trigger: GGTTGGAGATATACCAACCGCACTGGTGCAAAACAAGATCGATCTGCTGGATGATTCATGCATCAAAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| 3UTR CAA 72 bp | CTGGTTCTCTTGGTCCTTTGTTTGTTAGGTCTAAGGTaGATGACATCGCCACCATTAAGGGAACTTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLVLCLLGLR*MTSPPLRELEF Trigger: GAATTCAAGTTCCCTTAATGGTGGCGATGTCATCAACCTTAGACCTAACAAACAAAGGACCAAGAGAACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGGTACACTACAGCTGCTGAAAGGGTTTCTGGTTCTCTTGGTCCTTTGTTTTCTTGTAGTCTTTTGTaGAAATGCCTTTGCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGYTTAAERVSGSLGPLFSCSLL*KCLCSS Trigger: GCTACTGCAAAGGCATTTTCACAAAAGACTACAAGA...AAACAAAGGACCAAGAGAACCAGAAACCCTTTCAGCAGCTGTAGTGTACCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTTTGTTTACCTGTGTGCAGACAGCTTCATTTGTATGATGTATTTTTCAGCGAATTCTGGCCCAAGTaGCTTCTGACCGATGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: GFCLPVCRQLHLYDVFFSEFWPK*LLTDAL Trigger: TAATGCATCGGTCAGAAGTCACTTGGGCCAGAATTC...GCTGAAAAATACATCATACAAATGAAGCTGTCTGCACACAGGTAAACAAAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| 3UTR CAA 72 bp | GTGCTGGAATTTGAAATCTCCATGTGTATGGTCACCTaGAGTGGAGAAGAAACAGTTCAACCTGCTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: VLEFEISMCMVT*SGEETVQPAFI Trigger: AATAAAAGCAGGTTGAACTGTTTCTTCTCCACTCAAGGTGACCATACACATGGAGATTTCAAATTCCAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTTTGTTTACCTGTGTGCAGACAGCTTCATTTGTATGATGTATTTTTCAGCCTTTTTCTCTCCAGCTaGAAATCGCTTCAAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: GFCLPVCRQLHLYDVFFSLFLSS*KSLQKI Trigger: AATCTTTTGAAGCGATTTCCAGCTGGAGAGAAAAAG...GCTGAAAAATACATCATACAAATGAAGCTGTCTGCACACAGGTAAACAAAACCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| 3UTR CAA 72 bp | CTTGAGTGGAGAAGAAACAGTTCAACCTGCTTTTATTaGAACTGCTGTATGTATATGGGCTGTTTTATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LEWRRNSSTCFY*NCCMYMGCFIN Trigger: GTTTATAAAACAGCCCATATACATACAGCAGTTCAAATAAAAGCAGGTTGAACTGTTTCTTCTCCACTCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCGCTCCACAGGGCCTTCTGCCCACCACCACCATCTaGATGGCCACTTCCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: GLRSAARSWCARAPQGLLPTTTI*MATSIS Trigger: AGATATGGAAGTGGCCATCAAGATGGTGGTGGTGGG...CAGAAGGCCCTGTGGAGCGCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGGGCACAGGCCTACTGCCTGAGCCAGGAGTCTGCATGCACACCCCCACACTCTTGGTCCTTTGTTaGTTAGGTCTAAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SQGTGLLPEPGVCMHTPTLLVLC*LGLRLM Trigger: CATCAACCTTAGACCTAACAAACAAAGGACCAAGAG...TGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGCCTGTGCCCTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR CAA 90 bp | CTTGGAAGTTCAGAGTTTGGTCTCAGGTCAGCAGCCAGAAGCTGGTGTGCACGCCCCACCACCACCATCTaGATGGCCACTTCCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: LGSSEFGLRSAARSWCARPTTTI*MATSIS Trigger: AGATATGGAAGTGGCCATCAAGATGGTGGTGGTGGG...GCGTGCACACCAGCTTCTGGCTGCTGACCTGAGACCAAACTCTGAACTTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR CAA 90 bp | GCACCAGGGGCGCTAACAGCTGACCACACAGATGATCCTGCCTGCTTGGGATGCGGGTTTCTGGTTCTCTaGGTCCTTTGTTTGTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: APGALTADHTDDPACLGCGFLVL*VLCLLG Trigger: ACCTAACAAACAAAGGACCAAGAGAACCAGAAACCC...GCATCCCAAGCAGGCAGGATCATCTGTGTGGTCAGCTGTTAGCGCCCCTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR CAA 90 bp | TCACCACAGCCACCAGGATCCTCCAGAGGCAAGCAGCATCTCAGATTACAAGAGCCCACCACCACCATCTaGATGGCCACTTCCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: SPQPPGSSRGKQHLRLQEPTTTI*MATSIS Trigger: AGATATGGAAGTGGCCATCAAGATGGTGGTGGTGGG...CTCTTGTAATCTGAGATGCTGCTTGCCTCTGGAGGATCCTGGTGGCTGTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 ENSMUST00000138024.8 |
||
| CDS-3UTR CAA 90 bp | GCCTACTGCCTGAGCCAGGAGTCTGCATGCACACCCCCACAGTCCGCACATCACCAATCTTGTTACTACTaGAGTGTGTCTGTTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AYCLSQESACTPPQSAHHQSCYY*SVSVLD Trigger: ATCCAGAACAGACACACTCAAGTAGTAACAAGATTG...GTGATGTGCGGACTGTGGGGGTGTGCATGCAGACTCCTGGCTCAGGCAGTAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR CAA 90 bp | GGCCAACTCCCCATCCTAAACCCTCAGAAAGACAGGAGGGCCATACCCGAGTTCTCCGCTTCCTCATTTTaGATGCATGAATCATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQLPILNPQKDRRAIPEFSASSF*MHESSS Trigger: GCTGGATGATTCATGCATCAAAAATGAGGAAGCGGA...GAACTCGGGTATGGCCCTCCTGTCTTTCTGAGGGTTTAGGATGGGGAGTTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR CAA 90 bp | GCACCAGGGGCGCTAACAGCTGACCACACAGATGATCCTGCCTGCTTGGGATGCTTAAAGACACCAATCTaGTTACTACTTGAGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: APGALTADHTDDPACLGCLKTPI*LLLECV Trigger: GACACACTCAAGTAGTAACAAGATTGGTGTCTTTAA...GCATCCCAAGCAGGCAGGATCATCTGTGTGGTCAGCTGTTAGCGCCCCTGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGACCACACAGATGATCCTGCCTGCTTGGGATGCCAATGGGAAAAGCAATCCGCTTCCTCATTTTaGATGCATGAATCATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TADHTDDPACLGCQWEKQSASSF*MHESSS Trigger: GCTGGATGATTCATGCATCAAAAATGAGGAAGCGGA...TTGCTTTTCCCATTGGCATCCCAAGCAGGCAGGATCATCTGTGTGGTCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR CAA 90 bp | GTCTGCATGCACACCCCCACAGTCCGCACATCACGGATATTGCACGAGTACCTCTTAAAGACACCAATCTaGTTACTACTTGAGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VCMHTPTVRTSRILHEYLLKTPI*LLLECV Trigger: GACACACTCAAGTAGTAACAAGATTGGTGTCTTTAA...GAGGTACTCGTGCAATATCCGTGATGTGCGGACTGTGGGGGTGTGCATGCAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
||
| CDS-3UTR CAA 90 bp | TCACCACAGCCACCAGGATCCTCCAGAGGCAAGCAGCATCTCAGATTACAAGAGCTCTTGGTCCTTTGTTaGTTAGGTCTAAGGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: SPQPPGSSRGKQHLRLQELLVLC*LGLRLM Trigger: CATCAACCTTAGACCTAACAAACAAAGGACCAAGAG...CTCTTGTAATCTGAGATGCTGCTTGCCTCTGGAGGATCCTGGTGGCTGTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
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| CDS-3UTR CAA 90 bp | AGAATCCCAGGAGGGACAGGCCCGAGCAGTCAGACATTTACATTCCTTTCATCTGGGTTTCTGGTTCTCTaGGTCCTTTGTTTGTTAGGT | + |
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Preference number: 5 (lower is better) Translates to: RIPGGTGPSSQTFTFLSSGFLVL*VLCLLG Trigger: ACCTAACAAACAAAGGACCAAGAGAACCAGAAACCC...AGATGAAAGGAATGTAAATGTCTGACTGCTCGGGCCTGTCCCTCCTGGGATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
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| CDS-3UTR CAA 90 bp | CATTCTGAGGAGCACAGCAGAGCAGCGTTACAATGTCAGCTTTCAGAGCGTGGTCAATCTTGTTACTACTaGAGTGTGTCTGTTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: HSEEHSRAALQCQLSERGQSCYY*SVSVLD Trigger: ATCCAGAACAGACACACTCAAGTAGTAACAAGATTG...ACCACGCTCTGAAAGCTGACATTGTAACGCTGCTCTGCTGTGCTCCTCAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
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| CDS-3UTR CAA 90 bp | TGTATGTATATGGGCTGTTTTATAAACTATCTCCTTCTTAGGCCGAGACTGCAGTTTGCACCAGTGCGGTaGGTATATCTCCAACCTCCG | + |
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Preference number: 5 (lower is better) Translates to: CMYMGCFINYLLLRPRLQFAPVR*VYLQPP Trigger: CGGAGGTTGGAGATATACCAACCGCACTGGTGCAAA...CTGCAGTCTCGGCCTAAGAAGGAGATAGTTTATAAAACAGCCCATATACATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088287.10 ENSMUST00000115174.4 |
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| CDS TCA 72 bp | AAATCGGAACCAAGGGATAAAGCGCTGGGTACGTACTaGATCTGTCGCTCCAAAAAGTCTACGCCGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: KSEPRDKALGTY*ICRSKKSTPMV Trigger: AACCATCGGCGTAGACTTTTTGGAGCGACAGATTCAGTACGTACCCAGCGCTTTATCCCTTGGTTCCGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138024.8 |
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