Pregenerated sensors for RAB18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073639Ensembl transcript IDs: ENSMUST00000097680.7, ENSMUST00000234626.2, ENSMUST00000234720.2, ENSMUST00000234810.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCACAAGGACGCAAGTTCATCTCCCCAGAACCCATGCAAAAGGCTaGGCAGGCACACGTGTAATCCCAAGGCTGCAGACACAGACTCTA | + |
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Preference number: 1 (lower is better) Translates to: STRTQVHLPRTHAKG*AGTRVIPRLQTQTL Trigger: TAGAGTCTGTGTCTGCAGCCTTGGGATTACACGTGTGCCTGCCCAGCCTTTTGCATGGGTTCTGGGGAGATGAACTTGCGTCCTTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR TCA 90 bp | ATAAGAGAGACTGTCTCACACAAGGAGGGAGAAAGCAGTGAGGACTaGCAATGGAGGCTGTCTCTGCCCTCCACAAGCTCAGGCACACAC | + |
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Preference number: 1 (lower is better) Translates to: IRETVSHKEGESSED*QWRLSLPSTSSGTH Trigger: GTGTGTGCCTGAGCTTGTGGAGGGCAGAGACAGCCTCCATTGTCAGTCCTCACTGCTTTCTCCCTCCTTGTGTGAGACAGTCTCTCTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR GCA 90 bp | TATCCTGAGATGCTGGACACATACACAATCCAACCCCCTGGAGGATaGACCAGGGAGACAGAGTTTGAAGCCAGTCTGGGACACACAGTG | + |
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Preference number: 1 (lower is better) Translates to: YPEMLDTYTIQPPGG*TRETEFEASLGHTV Trigger: CACTGTGTGTCCCAGACTGGCTTCAAACTCTGTCTCCCTGGTGCATCCTCCAGGGGGTTGGATTGTGTATGTGTCCAGCATCTCAGGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR GCA 90 bp | CTGCCACCCATGTCTAAGGACCTGAGTTCAGTTCCAGAGGTCCGATaGCAAGAGAGTTCACACTCATCTGTAACACCAGAGCTTGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: LPPMSKDLSSVPEVR*QESSHSSVTPELAG Trigger: CCCTGCAAGCTCTGGTGTTACAGATGAGTGTGAACTCTCTTGGCATCGGACCTCTGGAACTGAACTCAGGTCCTTAGACATGGGTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR GCA 90 bp | GGCAGGCACACGTGTAATCCCAAGGCTGCAGACACAGACTCTACTTaGAAAGCTCCAGGTCATAAGAGAGACTGTCTCACACAAGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: GRHTCNPKAADTDST*KAPGHKRDCLTQGG Trigger: CCCTCCTTGTGTGAGACAGTCTCTCTTATGACCTGGAGCTTTGCAAGTAGAGTCTGTGTCTGCAGCCTTGGGATTACACGTGTGCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CCA 90 bp | TGTGCATTGCCACGGTGCCTGTGCAGAGGTCAGAGTTGGGAAAGTTaGTTCTCTCCCACTGTGTGGGTCCTGGAAACTCAACTCAGATTG | + |
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Preference number: 1 (lower is better) Translates to: CALPRCLCRGQSWES*FSPTVWVLETQLRL Trigger: CAATCTGAGTTGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACTCTGACCTCTGCACAGGCACCGTGGCAATGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR GCA 90 bp | TATTTATGTGTGGGTGCATGGGTATGTGCATTGCCACGGTGCCTGTaGAGAGGTCAGAGTTGGGAAAGTTGGTTCTCTCCCACTGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: YLCVGAWVCALPRCL*RGQSWESWFSPTVW Trigger: CCACACAGTGGGAGAGAACCAACTTTCCCAACTCTGACCTCTGCACAGGCACCGTGGCAATGCACATACCCATGCACCCACACATAAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CCA 90 bp | CTGTGCAGAGGTCAGAGTTGGGAAAGTTGGTTCTCTCCCACTGTGTaGGTCCTGGAAACTCAACTCAGATTGGCATGCTTAGTGGCAACC | + |
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Preference number: 1 (lower is better) Translates to: LCRGQSWESWFSPTV*VLETQLRLACLVAT Trigger: GGTTGCCACTAAGCATGCCAATCTGAGTTGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACTCTGACCTCTGCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR TCA 90 bp | TTACATACCTGTCTGATCACCTTCCTCATTAGAATGGACATATCCTaGGATGCTGGACACATACACAATCCAACCCCCTGGAGGATGCAC | + |
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Preference number: 1 (lower is better) Translates to: LHTCLITFLIRMDIS*DAGHIHNPTPWRMH Trigger: GTGCATCCTCCAGGGGGTTGGATTGTGTATGTGTCCAGCATCTCAGGATATGTCCATTCTAATGAGGAAGGTGATCAGACAGGTATGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR TCA 90 bp | GTTTGGAGAGTGAGAGTTGACTGCCATGTCACCTGCCATTTTAGGTaGGTTCTGGGATGCAAATGCCAGTCTTCAAACTCTGAAACAAGT | + |
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Preference number: 1 (lower is better) Translates to: VWRVRVDCHVTCHFR*VLGCKCQSSNSETS Trigger: ACTTGTTTCAGAGTTTGAAGACTGGCATTTGCATCCCAGAACTCACCTAAAATGGCAGGTGACATGGCAGTCAACTCTCACTCTCCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR TCA 90 bp | GGGCAAACTCAGCTCAGCTGGGTTAAGCTGCTAGTAACTAACCAATaGGGAGACCAAGAATTCAGGGTCATGAGTAAAATCTCCTTGACA | + |
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Preference number: 1 (lower is better) Translates to: GQTQLSWVKLLVTNQ*GDQEFRVMSKISLT Trigger: TGTCAAGGAGATTTTACTCATGACCCTGAATTCTTGGTCTCCTCATTGGTTAGTTACTAGCAGCTTAACCCAGCTGAGCTGAGTTTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR TCA 90 bp | CACACACACACACAGAATGCAGAACTCTACTTAATTATGATATCATaGGCTTGTGGAGGTCAGCCTTCATTGTCAGTCCTCAGCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: HTHTQNAELYLIMIS*ACGGQPSLSVLSCL Trigger: GAGGCAGCTGAGGACTGACAATGAAGGCTGACCTCCACAAGCTCATGATATCATAATTAAGTAGAGTTCTGCATTCTGTGTGTGTGTGTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CCA 90 bp | CACACAGAATGCAGAACTCTACTTAATTATGATATCATGAGCTTGTaGAGGTCAGCCTTCATTGTCAGTCCTCAGCTGCCTCCTTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: HTECRTLLNYDIMSL*RSAFIVSPQLPPSS Trigger: AGAGGAAGGAGGCAGCTGAGGACTGACAATGAAGGCTGACCTCCACAAGCTCATGATATCATAATTAAGTAGAGTTCTGCATTCTGTGTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR GCA 90 bp | TTTTCACATGTATGTAAGAATGGGAAGATAGCTCTATTGGTAAAGTaGCTGCCACCCATGTCTAAGGACCTGAGTTCAGTTCCAGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: FSHVCKNGKIALLVK*LPPMSKDLSSVPEV Trigger: GACCTCTGGAACTGAACTCAGGTCCTTAGACATGGGTGGCAGGCACTTTACCAATAGAGCTATCTTCCCATTCTTACATACATGTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR TCA 90 bp | AGGGTCATGAGTAAAATCTCCTTGACAGGAATCCAGCTGCATCACTaGGCATATAACCTCAGAGAAATTGCATTACATACCTGTCTGATC | + |
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Preference number: 1 (lower is better) Translates to: RVMSKISLTGIQLHH*AYNLREIALHTCLI Trigger: GATCAGACAGGTATGTAATGCAATTTCTCTGAGGTTATATGCTCAGTGATGCAGCTGGATTCCTGTCAAGGAGATTTTACTCATGACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR TCA 90 bp | ACCAGCTGTATCCCATATTGCAAGTTTAGCCTTATTTCCATCCACTaGAATCGTTTTCACCTTAAAGTCAACACCTATTGTTGCTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: TSCIPYCKFSLISIH*NRFHLKVNTYCCCK Trigger: CTTGCAGCAACAATAGGTGTTGACTTTAAGGTGAAAACGATTTCAGTGGATGGAAATAAGGCTAAACTTGCAATATGGGATACAGCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234720.2 |
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| 3UTR GCA 90 bp | TTCTGGGATGCAAATGCCAGTCTTCAAACTCTGAAACAAGTACTTTaGCCAATGAACCACCTCTCTAGACACAACAATCAAATTTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: FWDANASLQTLKQVL*PMNHLSRHNNQIFK Trigger: TTTGAAAATTTGATTGTTGTGTCTAGAGAGGTGGTTCATTGGGCAAAGTACTTGTTTCAGAGTTTGAAGACTGGCATTTGCATCCCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CCA 90 bp | AAACAATTATTTCTCTTGAGTGTGCACACCACAACAAATCTAACTTaGCTGCATTTAGCCAGAATGAATCTACACATGGCAACTCAACTT | + |
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Preference number: 1 (lower is better) Translates to: KQLFLLSVHTTTNLT*LHLARMNLHMATQL Trigger: AAGTTGAGTTGCCATGTGTAGATTCATTCTGGCTAAATGCAGCCAAGTTAGATTTGTTGTGGTGTGCACACTCAAGAGAAATAATTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CAA 90 bp | TGCATGGGTATGTGCATTGCCACGGTGCCTGTGCAGAGGTCAGAGTaGGGAAAGTTGGTTCTCTCCCACTGTGTGGGTCCTGGAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: CMGMCIATVPVQRSE*GKLVLSHCVGPGNS Trigger: TGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACTCTGACCTCTGCACAGGCACCGTGGCAATGCACATACCCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGTTCAGTTCCAGAGGTCCGATGCCAAGAGAGTTCACACTCATCTGTAACAAAGCTCTCAGCCACTaGTCCAGTGCCTGCCTGACC | + |
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Preference number: 2 (lower is better) Translates to: PEFSSRGPMPREFTLICNKALSH*SSACLT Trigger: GGTCAGGCAGGCACTGGAGCAGTGGCTGAGAGCTTT...GTTACAGATGAGTGTGAACTCTCTTGGCATCGGACCTCTGGAACTGAACTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CAA 90 bp | ATGTGCATTGCCACGGTGCCTGTGCAGAGGTCAGAGTTGGGAAAGTaGGTTCTCTCCCACTGTGTGGGTCCTGGAAACTCAACTCAGATT | + |
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Preference number: 2 (lower is better) Translates to: MCIATVPVQRSELGK*VLSHCVGPGNSTQI Trigger: AATCTGAGTTGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACTCTGACCTCTGCACAGGCACCGTGGCAATGCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTGGGAAAGTTGGTTCTCTCCCACTGTGTGGGTCCTGGAAACTCAACTCAGACAACCCCCTGGAGGATaGACCAGGGAGACAGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SWESWFSPTVWVLETQLRQPPGG*TRETEF Trigger: AAACTCTGTCTCCCTGGTGCATCCTCCAGGGGGTTG...TCTGAGTTGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAAAATCGCACAACAGGCCCAGTGTCACTTTCTCTGCCTGTGGGTCAGGTTGACCTGCCATTTTAGGTaGGTTCTGGGATGCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: FKIAQQAQCHFLCLWVRLTCHFR*VLGCKC Trigger: GCATTTGCATCCCAGAACTCACCTAAAATGGCAGGT...CAACCTGACCCACAGGCAGAGAAAGTGACACTGGGCCTGTTGTGCGATTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGTTCAGTTCCAGAGGTCCGATGCCAAGAGAGTTCACACTCATCTGTAACCTTCTGAAACCCAAATaGCAGAAAGCCTGCCAGATG | + |
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Preference number: 2 (lower is better) Translates to: PEFSSRGPMPREFTLICNLLKPK*QKACQM Trigger: CATCTGGCAGGCTTTCTGCCATTTGGGTTTCAGAAG...GTTACAGATGAGTGTGAACTCTCTTGGCATCGGACCTCTGGAACTGAACTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAAAATCGCACAACAGGCCCAGTGTCACTTTCTCTGCCTGTGGGTCAGGTTGGAACAAAAGCAGACTTaGAGCAACACATACAGACAG | + |
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Preference number: 2 (lower is better) Translates to: FKIAQQAQCHFLCLWVRLEQKQT*SNTYRQ Trigger: CTGTCTGTATGTGTTGCTGCAAGTCTGCTTTTGTTC...CAACCTGACCCACAGGCAGAGAAAGTGACACTGGGCCTGTTGTGCGATTTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CAA 90 bp | CCAAGCTGGTGGAACTGTCCTTGTAAAGGATTAGGCATGACCTTCTaGGAGCAGATGTGTCACTGCTTTGAGGTTTCAAAATCGCACAAC | + |
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Preference number: 2 (lower is better) Translates to: PSWWNCPCKGLGMTF*EQMCHCFEVSKSHN Trigger: GTTGTGCGATTTTGAAACCTCAAAGCAGTGACACATCTGCTCCAAGAAGGTCATGCCTAATCCTTTACAAGGACAGTTCCACCAGCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGGAAAGTTGGTTCTCTCCCACTGTGTGGGTCCTGGAAACTCAACTCAGAGATGTGTCACTGCTTTaGGGTTTCAAAATCGCACAA | + |
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Preference number: 2 (lower is better) Translates to: SWESWFSPTVWVLETQLRDVSLL*GFKIAQ Trigger: TTGTGCGATTTTGAAACCTCAAAGCAGTGACACATC...TCTGAGTTGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CAA 90 bp | ACACACACAGAATGCAGAACTCTACTTAATTATGATATCATGAGCTaGTGGAGGTCAGCCTTCATTGTCAGTCCTCAGCTGCCTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: THTECRTLLNYDIMS*WRSAFIVSPQLPPS Trigger: GGAAGGAGGCAGCTGAGGACTGACAATGAAGGCTGACCTCCACAAGCTCATGATATCATAATTAAGTAGAGTTCTGCATTCTGTGTGTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTTATCCCCCGACAACCAACCACTGGTGCAAATTATTACAGTGTACTACAGTCAAACTCAGCTCAGCTaGGTTAAGCTGCTAGTAACT | + |
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Preference number: 2 (lower is better) Translates to: GLSPDNQPLVQIITVYYSQTQLS*VKLLVT Trigger: AGTTACTAGCAGCTTAACCCAGCTGAGCTGAGTTTG...ACTGTAGTACACTGTAATAATTTGCACCAGTGGTTGGTTGTCGGGGGATAACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGGAAAGTTGGTTCTCTCCCACTGTGTGGGTCCTGGAAACTCAACTCAGATATTGTGATGAAATATaGGCAAACTCAGCTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SWESWFSPTVWVLETQLRYCDEI*ANSAQL Trigger: CAGCTGAGCTGAGTTTGCCCATATTTCATCACAATA...TCTGAGTTGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR TCA 90 bp | GACACAGACTCTACTTGCAAAGCTCCAGGTCATAAGAGAGACTGTCTCACACAACCAGTCTTCAAACTCTaGAACAAGTACTTTGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: DTDSTCKAPGHKRDCLTQPVFKL*NKYFAQ Trigger: TTGGGCAAAGTACTTGTTTCAGAGTTTGAAGACTGG...TTGTGTGAGACAGTCTCTCTTATGACCTGGAGCTTTGCAAGTAGAGTCTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR TCA 90 bp | GACACAGACTCTACTTGCAAAGCTCCAGGTCATAAGAGAGACTGTCTCACACAACTAGTAACTAACCAATaGGGAGACCAAGAATTCAGG | + |
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Preference number: 2 (lower is better) Translates to: DTDSTCKAPGHKRDCLTQLVTNQ*GDQEFR Trigger: CCTGAATTCTTGGTCTCCTCATTGGTTAGTTACTAG...TTGTGTGAGACAGTCTCTCTTATGACCTGGAGCTTTGCAAGTAGAGTCTGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR GCA 90 bp | GTATGTCCATATGTGTATACAGACCCACAGTTGACACTGAGGCTTCTTATACTGATGACTACTCTAGCTTaGCTGCTTGATTCTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: VCPYVYTDPQLTLRLLILMTTLA*LLDSGA Trigger: GGCTCCAGAATCAAGCAGGCAAGCTAGAGTAGTCAT...CAGTATAAGAAGCCTCAGTGTCAACTGTGGGTCTGTATACACATATGGACATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTTATCCCCCGACAACCAACCACTGGTGCAAATTATTACAGTGTACTACAGTCATATCCTGAGATGCTaGACACATACACAATCCAAC | + |
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Preference number: 2 (lower is better) Translates to: GLSPDNQPLVQIITVYYSHILRC*THTQSN Trigger: GTTGGATTGTGTATGTGTCCAGCATCTCAGGATATG...ACTGTAGTACACTGTAATAATTTGCACCAGTGGTTGGTTGTCGGGGGATAACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR TCA 90 bp | GTATGTCCATATGTGTATACAGACCCACAGTTGACACTGAGGCTTCTTATACTGAAGTACTTTGCCCAATaGACCACCTCTCTAGACACA | + |
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Preference number: 2 (lower is better) Translates to: VCPYVYTDPQLTLRLLILKYFAQ*TTSLDT Trigger: TGTGTCTAGAGAGGTGGTTCATTGGGCAAAGTACTT...CAGTATAAGAAGCCTCAGTGTCAACTGTGGGTCTGTATACACATATGGACATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTTTCACATGTATGTAAGAATGGGAAGATAGCTCTATTGGTAAAGTGCCTGCCATGTCTAAGGACCTaGGTTCAGTTCCAGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: HFSHVCKNGKIALLVKCLPCLRT*VQFQRS Trigger: GGACCTCTGGAACTGAACTCAGGTCCTTAGACATGG...CAGGCACTTTACCAATAGAGCTATCTTCCCATTCTTACATACATGTGAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGTTCAGTTCCAGAGGTCCGATGCCAAGAGAGTTCACACTCATCTGTAACAAGAGCTGGAGATTATaGAATTCTGAAATAACTAGC | + |
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Preference number: 2 (lower is better) Translates to: PEFSSRGPMPREFTLICNKSWRL*NSEITS Trigger: GCTAGTTATTTCAGAATTCCATAATCTCCAGCTCTT...GTTACAGATGAGTGTGAACTCTCTTGGCATCGGACCTCTGGAACTGAACTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CAA 90 bp | CTATGTGATTGTTACAATGAAACTGGTTCCCATAGGCTCATGTATTaGAATGCTTGGTCCCAAGCTGGTGGAACTGTCCTTGTAAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LCDCYNETGSHRLMY*NAWSQAGGTVLVKD Trigger: ATCCTTTACAAGGACAGTTCCACCAGCTTGGGACCAAGCATTCAAATACATGAGCCTATGGGAACCAGTTTCATTGTAACAATCACATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR TCA 90 bp | GTATGTCCATATGTGTATACAGACCCACAGTTGACACTGAGGCTTCTTATACTGCTGTTCATGTTCTTCTaGAACCCAAATGGCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: VCPYVYTDPQLTLRLLILLFMFF*NPNGRK Trigger: CTTTCTGCCATTTGGGTTTCAGAAGAACATGAACAG...CAGTATAAGAAGCCTCAGTGTCAACTGTGGGTCTGTATACACATATGGACATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACTCAGCAAGAACAAGCAGAAGTCTTGTTAAGACAGACAAGACACAAAATGATAGGGTTAGTGCCCTaGGTAGCTGAGTTCATCACT | + |
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Preference number: 2 (lower is better) Translates to: MTQQEQAEVLLRQTRHKMIGLVP*VAEFIT Trigger: AGTGATGAACTCAGCTACGCAGGGCACTAACCCTAT...CATTTTGTGTCTTGTCTGTCTTAACAAGACTTCTGCTTGTTCTTGCTGAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR CCA 90 bp | GTATGTCCATATGTGTATACAGACCCACAGTTGACACTGAGGCTTCTTATACTGTCTCTATCTTCTGTTTaGAGAGTGAGAGTTGACTGC | + |
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Preference number: 2 (lower is better) Translates to: VCPYVYTDPQLTLRLLILSLSSV*RVRVDC Trigger: GCAGTCAACTCTCACTCTCCAAACAGAAGATAGAGA...CAGTATAAGAAGCCTCAGTGTCAACTGTGGGTCTGTATACACATATGGACATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCACAACCAAGCTCAAGTTGGCTCTTAGGCCAAAATATCAAAAATATACTGTGTGCTCAAGTATGTaGGGGTGTACATGTATGTCC | + |
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Preference number: 2 (lower is better) Translates to: EGTTKLKLALRPKYQKYTVCSSM*GCTCMS Trigger: GGACATACATGTACACCCCCACATACTTGAGCACAC...AGTATATTTTTGATATTTTGGCCTAAGAGCCAACTTGAGCTTGGTTGTGCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR GCA 90 bp | GACACAGACTCTACTTGCAAAGCTCCAGGTCATAAGAGAGACTGTCTCACACAACACACACACACAGAATaGAGAACTCTACTTAATTAT | + |
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Preference number: 2 (lower is better) Translates to: DTDSTCKAPGHKRDCLTQHTHTE*RTLLNY Trigger: ATAATTAAGTAGAGTTCTGCATTCTGTGTGTGTGTG...TTGTGTGAGACAGTCTCTCTTATGACCTGGAGCTTTGCAAGTAGAGTCTGTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CAA 90 bp | TTAGTACATTTTTCACATGTATGTAAGAATGGGAAGATAGCTCTATaGGTAAAGTGCCTGCCACCCATGTCTAAGGACCTGAGTTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LVHFSHVCKNGKIAL*VKCLPPMSKDLSSV Trigger: AACTGAACTCAGGTCCTTAGACATGGGTGGCAGGCACTTTACCAATAGAGCTATCTTCCCATTCTTACATACATGTGAAAAATGTACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCACAACCAAGCTCAAGTTGGCTCTTAGGCCAAAATATCAAAAATATACTTGGCAACTCAACTTTTaGCATAAATCCACACCCTCA | + |
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Preference number: 2 (lower is better) Translates to: EGTTKLKLALRPKYQKYTWQLNF*HKSTPS Trigger: TGAGGGTGTGGATTTATGTCAAAAGTTGAGTTGCCA...AGTATATTTTTGATATTTTGGCCTAAGAGCCAACTTGAGCTTGGTTGTGCCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR-3UTR CCA 90 bp | CTAACTAAATCAATGACCTTCCTGTTCAAGGAGAGACACTACCTCAAAAACAGACCTCCAGTCAGAATTTaGAACAATACACCTTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LTKSMTFLFKERHYLKNRPPVRI*NNTPFS Trigger: TGAGAAAGGTGTATTGTTCCAAATTCTGACTGGAGG...TCTGTTTTTGAGGTAGTGTCTCTCCTTGAACAGGAAGGTCATTGATTTAGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CAA 90 bp | AGTACTAAGAGTCTAAAGCATCCTAGAAAAGCTGTGAATCATGCTTaGTTATTCCTCAAGGGAAACCTTCCCATGGTTATAGTTCTACAT | + |
|
Preference number: 2 (lower is better) Translates to: STKSLKHPRKAVNHA*LFLKGNLPMVIVLH Trigger: ATGTAGAACTATAACCATGGGAAGGTTTCCCTTGAGGAATAACAAAGCATGATTCACAGCTTTTCTAGGATGCTTTAGACTCTTAGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
||
| 3UTR CAA 90 bp | TCGCAGACTAACCCTCTAACACTGTACACAATTAAATGTTTTCTTTaGTTAAAAGCTGCCTTGATCATGGTGCTTCTTAACAACCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: SQTNPLTLYTIKCFL*LKAALIMVLLNNHG Trigger: TCCATGGTTGTTAAGAAGCACCATGATCAAGGCAGCTTTTAACAAAAGAAAACATTTAATTGTGTACAGTGTTAGAGGGTTAGTCTGCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGCAAACAATTATTTCTCTTGAGTGTGCACACCACAACAAATCTAACTTGGTGTGAGGTTTCCATATaGAGACACCCTATTCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: MSKQLFLLSVHTTTNLTWCEVSI*RHPIQK Trigger: TTTCTGAATAGGGTGTCTTCATATGGAAACCTCACA...CCAAGTTAGATTTGTTGTGGTGTGCACACTCAAGAGAAATAATTGTTTGCTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGAAAACATACACTGTACGGCAACAAGGAGTTAGAAAACTGAATATTGTGGAACACTTATGTGCAAACTaGAAGGTCCCTAATAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: KKTYTVRQQGVRKLNIVEHLCAN*KVPNSS Trigger: ACTGCTATTAGGGACCTTGCAGTTTGCACATAAGTG...TTCCACAATATTCAGTTTTCTAACTCCTTGTTGCCGTACAGTGTATGTTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAACTAAATCAATGACCTTCCTGTTCAAGGAGAGACACTACCTCAAAAACAGACTACAGACTGAAAACTaGATGCTTACCATACCATTT | + |
|
Preference number: 2 (lower is better) Translates to: LTKSMTFLFKERHYLKNRLQTEN*MLTIPF Trigger: AAATGGTATGGTAAGCATGCAGTTTTCAGTCTGTAG...TCTGTTTTTGAGGTAGTGTCTCTCCTTGAACAGGAAGGTCATTGATTTAGTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGCAAACAATTATTTCTCTTGAGTGTGCACACCACAACAAATCTAACTTGGCTATCTGATCAAATATaGAAGAGATGGAATTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: MSKQLFLLSVHTTTNLTWLSDQI*KRWNSQ Trigger: CTGGGAATTCCATCTCTTGCATATTTGATCAGATAG...CCAAGTTAGATTTGTTGTGGTGTGCACACTCAAGAGAAATAATTGTTTGCTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAAACATACACTGTACGGCAACAAGGAGTTAGAAAACTGAATATTGTGGAAGCAACTAGTCATTTATaGAAGCCATTAAGATACAGA | + |
|
Preference number: 2 (lower is better) Translates to: KKTYTVRQQGVRKLNIVEATSHL*KPLRYR Trigger: TCTGTATCTTAATGGCTTCCATAAATGACTAGTTGC...TTCCACAATATTCAGTTTTCTAACTCCTTGTTGCCGTACAGTGTATGTTTTCTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CCA 72 bp | CCACGGTGCCTGTGCAGAGGTCAGAGTTGGGAAAGTTaGTTCTCTCCCACTGTGTGGGTCCTGGAAACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PRCLCRGQSWES*FSPTVWVLETQ Trigger: TTGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACTCTGACCTCTGCACAGGCACCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR TCA 72 bp | ACTGTCTCACACAAGGAGGGAGAAAGCAGTGAGGACTaGCAATGGAGGCTGTCTCTGCCCTCCACAAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TVSHKEGESSED*QWRLSLPSTSS Trigger: TGAGCTTGTGGAGGGCAGAGACAGCCTCCATTGTCAGTCCTCACTGCTTTCTCCCTCCTTGTGTGAGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR GCA 72 bp | ATGCTGGACACATACACAATCCAACCCCCTGGAGGATaGACCAGGGAGACAGAGTTTGAAGCCAGTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: MLDTYTIQPPGG*TRETEFEASLG Trigger: TCCCAGACTGGCTTCAAACTCTGTCTCCCTGGTGCATCCTCCAGGGGGTTGGATTGTGTATGTGTCCAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR GCA 72 bp | AAGCACAAGGACGCAAGTTCATCTCCCCAGAACCCATaGAAAAGGCTGGGCAGGCACACGTGTAATCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KHKDASSSPQNP*KRLGRHTCNPK Trigger: CTTGGGATTACACGTGTGCCTGCCCAGCCTTTTGCATGGGTTCTGGGGAGATGAACTTGCGTCCTTGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGGAAAGTTGGTTCTCTCCCACTGTGTGGGTCCTGGAAACTCAACTCAGAGGAGGTCAGCCTTCATaGTCAGTCCTCAGCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SWESWFSPTVWVLETQLRGGQPS*SVLSCL Trigger: GAGGCAGCTGAGGACTGACAATGAAGGCTGACCTCC...TCTGAGTTGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR TCA 72 bp | GTGTGCCCAGCCATTTGCATGGGTTCTAGGGAGAGATaGACTCGGGTCCTCAAGCTTGCAAGGTACTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: VCPAICMGSRER*TRVLKLARYFT Trigger: GGTAAAGTACCTTGCAAGCTTGAGGACCCGAGTTCATCTCTCCCTAGAACCCATGCAAATGGCTGGGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR TCA 72 bp | AGGCATGACCTTCTTGGAGCAGATGTGTCACTGCTTTaGGGTTTCAAAATCGCACAACAGGCCCAGTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RHDLLGADVSLL*GFKIAQQAQCH Trigger: GTGACACTGGGCCTGTTGTGCGATTTTGAAACCTCAAAGCAGTGACACATCTGCTCCAAGAAGGTCATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CCA 72 bp | GGTCAGAGTTGGGAAAGTTGGTTCTCTCCCACTGTGTaGGTCCTGGAAACTCAACTCAGATTGGCATGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GQSWESWFSPTV*VLETQLRLACL Trigger: TAAGCATGCCAATCTGAGTTGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACTCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR GCA 72 bp | CTGAGCCCAAAGCTTGCCAACATGACTACTCTAGCTTaGCTGCTTGATTCTGGAGCCTCTATCTCTATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSPKLANMTTLA*LLDSGASISIF Trigger: GAAGATAGAGATAGAGGCTCCAGAATCAAGCAGGCAAGCTAGAGTAGTCATGTTGGCAAGCTTTGGGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR GCA 72 bp | GGATTAGGCATGACCTTCTTGGAGCAGATGTGTCACTaGTTTGAGGTTTCAAAATCGCACAACAGGCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GLGMTFLEQMCH*FEVSKSHNRPS Trigger: ACTGGGCCTGTTGTGCGATTTTGAAACCTCAAAGCAGTGACACATCTGCTCCAAGAAGGTCATGCCTAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR GCA 72 bp | GTGGCTACTTTTGCAGTAACTTATCAACGATCTCACTaGAAGAGCCTCTCCCCTCCAGTCAGAATTTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VATFAVTYQRSH*KSLSPPVRIWN Trigger: GTTCCAAATTCTGACTGGAGGGGAGAGGCTCTTGCAGTGAGATCGTTGATAAGTTACTGCAAAAGTAGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR TCA 72 bp | TTCTGGAGCCTCTATCTCTATCTTCTGTTTGGAGAGTaGGAGTTGACTGCCATGTCACCTGCCATTTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FWSLYLYLLFGE*ELTAMSPAILG Trigger: ACCTAAAATGGCAGGTGACATGGCAGTCAACTCTCACTCTCCAAACAGAAGATAGAGATAGAGGCTCCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR GCA 72 bp | GTTCATGTTCTTCTGAAACCCAAATGGCAGAAAGCCTaGCAGATGCCATGTAACCAAAACATCGCACCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VHVLLKPKWQKA*QMPCNQNIAPR Trigger: TCTTGGTGCGATGTTTTGGTTACATGGCATCTGGCAGGCTTTCTGCCATTTGGGTTTCAGAAGAACATGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR GCA 72 bp | ACACGCACACGCGCGCACACACACACACACACAGAATaGAGAACTCTACTTAATTATGATATCATGAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TRTRAHTHTHTE*RTLLNYDIMSL Trigger: CAAGCTCATGATATCATAATTAAGTAGAGTTCTGCATTCTGTGTGTGTGTGTGTGTGCGCGCGTGTGCGTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR TCA 72 bp | AAAGCTTGCCAACATGACTACTCTAGCTTGCCTGCTTaGTTCTGGAGCCTCTATCTCTATCTTCTGTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: KACQHDYSSLPA*FWSLYLYLLFG Trigger: TCCAAACAGAAGATAGAGATAGAGGCTCCAGAATCAAGCAGGCAAGCTAGAGTAGTCATGTTGGCAAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR TCA 72 bp | CAGCTCAGCTGGGTTAAGCTGCTAGTAACTAACCAATaGGGAGACCAAGAATTCAGGGTCATGAGTAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: QLSWVKLLVTNQ*GDQEFRVMSKI Trigger: GATTTTACTCATGACCCTGAATTCTTGGTCTCCTCATTGGTTAGTTACTAGCAGCTTAACCCAGCTGAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR GCA 72 bp | CAAAAACTAAACCACACCTCTGCTCCAGCCCAGGGTTaGCTTAAGAGAAATCCAGAAACTCTAAAGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QKLNHTSAPAQG*LKRNPETLKER Trigger: TCTTTCCTTTAGAGTTTCTGGATTTCTCTTAAGGCAACCCTGGGCTGGAGCAGAGGTGTGGTTTAGTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CCA 72 bp | TTGACTGCCATGTCACCTGCCATTTTAGGTGAGTTCTaGGATGCAAATGCCAGTCTTCAAACTCTGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LTAMSPAILGEF*DANASLQTLKQ Trigger: TTGTTTCAGAGTTTGAAGACTGGCATTTGCATCCCAGAACTCACCTAAAATGGCAGGTGACATGGCAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CCA 72 bp | TGCAGAACTCTACTTAATTATGATATCATGAGCTTGTaGAGGTCAGCCTTCATTGTCAGTCCTCAGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CRTLLNYDIMSL*RSAFIVSPQLP Trigger: AGGCAGCTGAGGACTGACAATGAAGGCTGACCTCCACAAGCTCATGATATCATAATTAAGTAGAGTTCTGCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR-3UTR CAA 90 bp | GACACAGACTCTACTTGCAAAGCTCCAGGTCATAAGAGAGACTGTCTCACACAACACAACAAATCTAACTaGGCTGCATTTAGCCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: DTDSTCKAPGHKRDCLTQHNKSN*AAFSQN Trigger: ATTCTGGCTAAATGCAGCCAAGTTAGATTTGTTGTG...TTGTGTGAGACAGTCTCTCTTATGACCTGGAGCTTTGCAAGTAGAGTCTGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR TCA 72 bp | TATACCCAAACTATACTTAAAAAGATACTGTGGATCTaGCTGTCTGGGTTATCCCCCGACAACCAACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: YTQTILKKILWI*LSGLSPDNQPL Trigger: CAGTGGTTGGTTGTCGGGGGATAACCCAGACAGTCAGATCCACAGTATCTTTTTAAGTATAGTTTGGGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CCA 72 bp | TCTGACTGTCTGGGTTATCCCCCGACAACCAACCACTaGTGCAAATTATTACAGTGTACTACAGTATTACAA | + |
|
Preference number: 3 (lower is better) Translates to: SDCLGYPPTTNH*CKLLQCTTVLQ Trigger: TTGTAATACTGTAGTACACTGTAATAATTTGCACCAGTGGTTGGTTGTCGGGGGATAACCCAGACAGTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR TCA 72 bp | ACACAGAATGCAGAACTCTACTTAATTATGATATCATaGGCTTGTGGAGGTCAGCCTTCATTGTCAGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TQNAELYLIMIS*ACGGQPSLSVL Trigger: GAGGACTGACAATGAAGGCTGACCTCCACAAGCTCATGATATCATAATTAAGTAGAGTTCTGCATTCTGTGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR GCA 72 bp | GCAAATGCCAGTCTTCAAACTCTGAAACAAGTACTTTaGCCAATGAACCACCTCTCTAGACACAACAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: ANASLQTLKQVL*PMNHLSRHNNQ Trigger: TTGATTGTTGTGTCTAGAGAGGTGGTTCATTGGGCAAAGTACTTGTTTCAGAGTTTGAAGACTGGCATTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CCA 72 bp | ACACAGGTGAAAATTTCTATACGTATCTGGGTAAAGTaGCACACTCCTGAAATCCCAGCACACTCAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TQVKISIRIWVK*HTPEIPAHSSF Trigger: AAAACTTGAGTGTGCTGGGATTTCAGGAGTGTGCCACTTTACCCAGATACGTATAGAAATTTTCACCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAACTAAATCAATGACCTTCCTGTTCAAGGAGAGACACTACCTCAAAAACAGATATACAGACCCACAGTaGACACTGAGGCTTCTTATA | + |
|
Preference number: 3 (lower is better) Translates to: LTKSMTFLFKERHYLKNRYTDPQ*TLRLLI Trigger: TATAAGAAGCCTCAGTGTCAACTGTGGGTCTGTATA...TCTGTTTTTGAGGTAGTGTCTCTCCTTGAACAGGAAGGTCATTGATTTAGTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR TCA 72 bp | AGTAAAATCTCCTTGACAGGAATCCAGCTGCATCACTaGGCATATAACCTCAGAGAAATTGCATTACATACC | + |
|
Preference number: 3 (lower is better) Translates to: SKISLTGIQLHH*AYNLREIALHT Trigger: GGTATGTAATGCAATTTCTCTGAGGTTATATGCTCAGTGATGCAGCTGGATTCCTGTCAAGGAGATTTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CCA 72 bp | ACTGCTCTGAAACAGAAGGCACAACCAAGCTCAAGTTaGCTCTTAGGCCAAAATATCAAAAATATACTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TALKQKAQPSSS*LLGQNIKNILK Trigger: CTTTAGTATATTTTTGATATTTTGGCCTAAGAGCCAACTTGAGCTTGGTTGTGCCTTCTGTTTCAGAGCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CCA 72 bp | CTGGGTTTTTATGTTCTAACAGCATCTGCAAAGAGCTaGAGATTATGGAATTCTGAAATAACTAGCAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGFYVLTASAKS*RLWNSEITSKA Trigger: AGCTTTGCTAGTTATTTCAGAATTCCATAATCTCCAGCTCTTTGCAGATGCTGTTAGAACATAAAAACCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CAA 72 bp | ATGTGCATTGCCACGGTGCCTGTGCAGAGGTCAGAGTaGGGAAAGTTGGTTCTCTCCCACTGTGTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MCIATVPVQRSE*GKLVLSHCVGP Trigger: AGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACTCTGACCTCTGCACAGGCACCGTGGCAATGCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CAA 72 bp | TGGGTTCTAGGGAGAGATGAACTCGGGTCCTCAAGCTaGCAAGGTACTTTACCAACTGAGGCATTCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WVLGRDELGSSS*QGTLPTEAFLQ Trigger: TTGCAGGAATGCCTCAGTTGGTAAAGTACCTTGCAAGCTTGAGGACCCGAGTTCATCTCTCCCTAGAACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| CDS-3UTR TCA 90 bp | GGGTTATCCCCCGACAACCAACCACTGGTGCAAATTATTACAGTGTACTACAGTCACAGGCCAGGTGTCTaGATGATCTTCTCAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSPDNQPLVQIITVYYSHRPGV*MIFSTS Trigger: GCTTGTTGAGAAGATCATTCAGACACCTGGCCTGTG...ACTGTAGTACACTGTAATAATTTGCACCAGTGGTTGGTTGTCGGGGGATAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCACTGAAATCGTTTTCACCTTAAAGTCAACACCTATTGTTGCTGCAAGTTCCTGCTACCTCAACTaGTCTAGCTCTGGACTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTEIVFTLKSTPIVAASSCYLN*SSSGLA Trigger: GGCAAGTCCAGAGCTAGATCAGTTGAGGTAGCAGGA...ACTTGCAGCAACAATAGGTGTTGACTTTAAGGTGAAAACGATTTCAGTGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234720.2 |
||
| CDS-3UTR TCA 90 bp | CACTGCCATGATAAAAACACTTATGTGCAAACTGCAAGGTCCCTAATAGCAGTTGCTCTCTTCCCTGTGTaGCAGCTTGACTCCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HCHDKNTYVQTARSLIAVALFPV*QLDSFV Trigger: AACAAAGGAGTCAAGCTGTCACACAGGGAAGAGAGC...AACTGCTATTAGGGACCTTGCAGTTTGCACATAAGTGTTTTTATCATGGCAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAAAGTTGGTTCTCTCCCACTGTGTGGGTCCTGGAAACTCAACTCAGAATGAACAACATAGAATaGTTGCGTGCAAATTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SWESWFSPTVWVLETQLRMNNIE*LRANFK Trigger: CTTGAAATTTGCACGCAAGCATTCTATGTTGTTCAT...TCTGAGTTGAGTTTCCAGGACCCACACAGTGGGAGAGAACCAACTTTCCCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| 3UTR CAA 72 bp | GAATGCAGAACTCTACTTAATTATGATATCATGAGCTaGTGGAGGTCAGCCTTCATTGTCAGTCCTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ECRTLLNYDIMS*WRSAFIVSPQL Trigger: CAGCTGAGGACTGACAATGAAGGCTGACCTCCACAAGCTCATGATATCATAATTAAGTAGAGTTCTGCATTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| CDS-3UTR TCA 90 bp | AATACTCACTGCCATGATAAAAACACTTATGTGCAAACTGCAAGGTCCCTAATAGCTCTCTTCCCTGTGTaGCAGCTTGACTCCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTHCHDKNTYVQTARSLIALFPV*QLDSFV Trigger: AACAAAGGAGTCAAGCTGTCACACAGGGAAGAGAGC...TATTAGGGACCTTGCAGTTTGCACATAAGTGTTTTTATCATGGCAGTGAGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
||
| CDS-3UTR GCA 90 bp | ACCATTTCACCTGGGAAAGCCAATGAGGGAGTTTCTTGCAAATACTCACTGCCAAGCTGTATCCCATATTaGAAGTTTAGCCTTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TISPGKANEGVSCKYSLPSCIPY*KFSLIS Trigger: GGAAATAAGGCTAAACTTGCAATATGGGATACAGCT...TGGCAGTGAGTATTTGCAAGAAACTCCCTCATTGGCTTTCCCAGGTGAAATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGCAAACAATTATTTCTCTTGAGTGTGCACACCACAACAAATCTAACTTGGTGGGAGTTAATGTTCTaGACCTCTCTTGACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MSKQLFLLSVHTTTNLTWWELMF*TSLDQL Trigger: CAGCTGGTCAAGAGAGGTTCAGAACATTAACTCCCA...CCAAGTTAGATTTGTTGTGGTGTGCACACTCAAGAGAAATAATTGTTTGCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGCAAACTGCAAGGTCCCTAATAGCAGTTAAGAGTTTATATACAGAAAGACACAGGCCAGGTGTCTaGATGATCTTCTCAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVQTARSLIAVKSLYTERHRPGV*MIFSTS Trigger: GCTTGTTGAGAAGATCATTCAGACACCTGGCCTGTG...TCTTTCTGTATATAAACTCTTAACTGCTATTAGGGACCTTGCAGTTTGCACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
||
| CDS-3UTR TCA 90 bp | TATGTGCAAACTGCAAGGTCCCTAATAGCAGTTAAGAGTTTATATACAGAAAGACCCTGTGTGACAGCTTaGCTCCTTTGTTCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YVQTARSLIAVKSLYTERPCVTA*LLCSGS Trigger: AGAACCAGAACAAAGGAGTCAAGCTGTCACACAGGG...TCTTTCTGTATATAAACTCTTAACTGCTATTAGGGACCTTGCAGTTTGCACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
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| CDS-3UTR GCA 90 bp | GATGCAAATGCCAGTCTTCAAACTCTGAAACAAGTACTTTGCCCAATGAACCACACCATCACAGGTTTTTaGACTTGCCTCTATGAACAA | + |
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Preference number: 4 (lower is better) Translates to: DANASLQTLKQVLCPMNHTITGF*TCLYEQ Trigger: TTGTTCATAGAGGCAAGTGCAAAAACCTGTGATGGT...GTGGTTCATTGGGCAAAGTACTTGTTTCAGAGTTTGAAGACTGGCATTTGCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| CDS-3UTR TCA 90 bp | TATGTGCAAACTGCAAGGTCCCTAATAGCAGTTAAGAGTTTATATACAGAAAGATGGGAGTTAATGTTCTaGACCTCTCTTGACCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: YVQTARSLIAVKSLYTERWELMF*TSLDQL Trigger: CAGCTGGTCAAGAGAGGTTCAGAACATTAACTCCCA...TCTTTCTGTATATAAACTCTTAACTGCTATTAGGGACCTTGCAGTTTGCACATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
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| 3UTR CAA 72 bp | AGTCTAAAGCATCCTAGAAAAGCTGTGAATCATGCTTaGTTATTCCTCAAGGGAAACCTTCCCATGGTTATA | + |
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Preference number: 4 (lower is better) Translates to: SLKHPRKAVNHA*LFLKGNLPMVI Trigger: TATAACCATGGGAAGGTTTCCCTTGAGGAATAACAAAGCATGATTCACAGCTTTTCTAGGATGCTTTAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
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| CDS-3UTR GCA 90 bp | ATGACTCAGCAAGAACAAGCAGAAGTCTTGTTAAGACAGACAAGACACAAAATGCATAGAATGCTTGCGTaGAAATTTCAAGCCTTCATT | + |
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Preference number: 4 (lower is better) Translates to: MTQQEQAEVLLRQTRHKMHRMLA*KFQAFI Trigger: AATGAAGGCTTGAAATTTGCACGCAAGCATTCTATG...CATTTTGTGTCTTGTCTGTCTTAACAAGACTTCTGCTTGTTCTTGCTGAGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CAA 72 bp | AACGACAGCATGACTCAGCAAGAACAAGCAGAAGTCTaGTTAAGACAGACAAGACACAAAATGTACATAAAT | + |
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Preference number: 4 (lower is better) Translates to: NDSMTQQEQAEV*LRQTRHKMYIN Trigger: ATTTATGTACATTTTGTGTCTTGTCTGTCTTAACAAGACTTCTGCTTGTTCTTGCTGAGTCATGCTGTCGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| 3UTR CAA 72 bp | TACTGCTCTGAAACAGAAGGCACAACCAAGCTCAAGTaGGCTCTTAGGCCAAAATATCAAAAATATACTAAA | + |
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Preference number: 4 (lower is better) Translates to: YCSETEGTTKLK*ALRPKYQKYTK Trigger: TTTAGTATATTTTTGATATTTTGGCCTAAGAGCCAACTTGAGCTTGGTTGTGCCTTCTGTTTCAGAGCAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| CDS-3UTR GCA 90 bp | TATGTGCAAACTGCAAGGTCCCTAATAGCAGTTAAGAGTTTATATACAGAAAGAAGCTGTATCCCATATTaGAAGTTTAGCCTTATTTCC | + |
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Preference number: 4 (lower is better) Translates to: YVQTARSLIAVKSLYTERSCIPY*KFSLIS Trigger: GGAAATAAGGCTAAACTTGCAATATGGGATACAGCT...TCTTTCTGTATATAAACTCTTAACTGCTATTAGGGACCTTGCAGTTTGCACATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
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| CDS-3UTR GCA 90 bp | TATGTGCAAACTGCAAGGTCCCTAATAGCAGTTAAGAGTTTATATACAGAAAGAACCATCACAGGTTTTTaGACTTGCCTCTTATCAATT | + |
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Preference number: 4 (lower is better) Translates to: YVQTARSLIAVKSLYTERTITGF*TCLLSI Trigger: AATTGATAAGAGGCAAGTGCAAAAACCTGTGATGGT...TCTTTCTGTATATAAACTCTTAACTGCTATTAGGGACCTTGCAGTTTGCACATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097680.7 |
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| CDS TCA 90 bp | GCAGTAACCGCCGCAGGCGCCTCCTCCGCGGCTCTCTTCCCTGTGTaGCAGCTTGACTCCTTTGTTCTGGTTCTCACTTTCCCACAGGCC | + |
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Preference number: 5 (lower is better) Translates to: AVTAAGASSAALFPV*QLDSFVLVLTFPQA Trigger: GGCCTGTGGGAAAGTGAGAACCAGAACAAAGGAGTCAAGCTGTCACACAGGGAAGAGAGCCGCGGAGGAGGCGCCTGCGGCGGTTACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097680.7 ENSMUST00000234626.2 ENSMUST00000234810.2 |
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| CDS-3UTR CAA 90 bp | TTCAAAATCGCACAACAGGCCCAGTGTCACTTTCTCTGCCTGTGGGTCAGGTTGTCCCTGTGTGACAGCTaGACTCCTTTGTTCTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: FKIAQQAQCHFLCLWVRLSLCDS*TPLFWF Trigger: GAACCAGAACAAAGGAGTCAAGCTGTCACACAGGGA...CAACCTGACCCACAGGCAGAGAAAGTGACACTGGGCCTGTTGTGCGATTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| CDS-3UTR CAA 90 bp | ACCATTTCACCTGGGAAAGCCAATGAGGGAGTTTCTTGCAAATACTCACTGCCATGTTCTGAACCTCTCTaGACCAGCTGTATCCCATAT | + |
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Preference number: 5 (lower is better) Translates to: TISPGKANEGVSCKYSLPCSEPL*TSCIPY Trigger: ATATGGGATACAGCTGGTCAAGAGAGGTTCAGAACA...TGGCAGTGAGTATTTGCAAGAAACTCCCTCATTGGCTTTCCCAGGTGAAATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
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| CDS-3UTR CAA 90 bp | CACTGCCATGATAAAAACACTTATGTGCAAACTGCAAGGTCCCTAATAGCAGTTTCCCTGTGTGACAGCTaGACTCCTTTGTTCTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: HCHDKNTYVQTARSLIAVSLCDS*TPLFWF Trigger: GAACCAGAACAAAGGAGTCAAGCTGTCACACAGGGA...AACTGCTATTAGGGACCTTGCAGTTTGCACATAAGTGTTTTTATCATGGCAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
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| CDS-3UTR CAA 90 bp | GATGCAAATGCCAGTCTTCAAACTCTGAAACAAGTACTTTGCCCAATGAACCACTGTTCTGAACCTCTCTaGACCAGCTGTATCCCATAT | + |
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Preference number: 5 (lower is better) Translates to: DANASLQTLKQVLCPMNHCSEPL*TSCIPY Trigger: ATATGGGATACAGCTGGTCAAGAGAGGTTCAGAACA...GTGGTTCATTGGGCAAAGTACTTGTTTCAGAGTTTGAAGACTGGCATTTGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| CDS-3UTR CAA 90 bp | CACTGCCATGATAAAAACACTTATGTGCAAACTGCAAGGTCCCTAATAGCAGTTGACAGCTTGACTCCTTaGTTCTGGTTCTCACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: HCHDKNTYVQTARSLIAVDSLTP*FWFSLS Trigger: GGAAAGTGAGAACCAGAACAAAGGAGTCAAGCTGTC...AACTGCTATTAGGGACCTTGCAGTTTGCACATAAGTGTTTTTATCATGGCAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097680.7 ENSMUST00000234810.2 |
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| CDS-3UTR CAA 90 bp | CACTGCCATGATAAAAACACTTATGTGCAAACTGCAAGGTCCCTAATAGCAGTTCACCATCACAGGTTTTaGCACTTGCCTCTTATCAAT | + |
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Preference number: 5 (lower is better) Translates to: HCHDKNTYVQTARSLIAVHHHRF*HLPLIN Trigger: ATTGATAAGAGGCAAGTGCAAAAACCTGTGATGGTG...AACTGCTATTAGGGACCTTGCAGTTTGCACATAAGTGTTTTTATCATGGCAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097680.7 |
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| CDS-3UTR CAA 90 bp | ATGAGCAAACAATTATTTCTCTTGAGTGTGCACACCACAACAAATCTAACTTGGGACAGCTTGACTCCTTaGTTCTGGTTCTCACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: MSKQLFLLSVHTTTNLTWDSLTP*FWFSLS Trigger: GGAAAGTGAGAACCAGAACAAAGGAGTCAAGCTGTC...CCAAGTTAGATTTGTTGTGGTGTGCACACTCAAGAGAAATAATTGTTTGCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| CDS GCA 90 bp | ACAGGTTTTTGCACTTGCCTCTATGAACAACATAGAATGCTTGCGTaGAAATTTCAAGCCTTCATTTCTATCGACTTCACGGTTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TGFCTCLYEQHRMLA*KFQAFISIDFTVFL Trigger: AAGGAAAACCGTGAAGTCGATAGAAATGAAGGCTTGAAATTTGCACGCAAGCATTCTATGTTGTTCATAGAGGCAAGTGCAAAAACCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234626.2 ENSMUST00000234810.2 |
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| CDS-3UTR CAA 90 bp | AAGAAAACATACACTGTACGGCAACAAGGAGTTAGAAAACTGAATATTGTGGAAAACAACATAGAATGCTaGCGTGCAAATTTCAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: KKTYTVRQQGVRKLNIVENNIEC*RANFKP Trigger: AGGCTTGAAATTTGCACGCAAGCATTCTATGTTGTT...TTCCACAATATTCAGTTTTCTAACTCCTTGTTGCCGTACAGTGTATGTTTTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234810.2 |
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| CDS CAA 90 bp | CCGCCGCAGGCGCCTCCTCCGCGGCTCTCTTCCCTGTGTGACAGCTaGACTCCTTTGTTCTGGTTCTCACTTTCCCACAGGCCAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: PPQAPPPRLSSLCDS*TPLFWFSLSHRPGV Trigger: GACACCTGGCCTGTGGGAAAGTGAGAACCAGAACAAAGGAGTCAAGCTGTCACACAGGGAAGAGAGCCGCGGAGGAGGCGCCTGCGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097680.7 ENSMUST00000234626.2 ENSMUST00000234810.2 |
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| CDS TCA 72 bp | GCCGCAGGCGCCTCCTCCGCGGCTCTCTTCCCTGTGTaGCAGCTTGACTCCTTTGTTCTGGTTCTCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: AAGASSAALFPV*QLDSFVLVLTF Trigger: GAAAGTGAGAACCAGAACAAAGGAGTCAAGCTGTCACACAGGGAAGAGAGCCGCGGAGGAGGCGCCTGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097680.7 ENSMUST00000234626.2 ENSMUST00000234810.2 |
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| CDS TCA 72 bp | CGCCTCCTCCGCGGCTCTCTTCCCTGTGTGACAGCTTaGCTCCTTTGTTCTGGTTCTCACTTTCCCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: RLLRGSLPCVTA*LLCSGSHFPTG Trigger: GCCTGTGGGAAAGTGAGAACCAGAACAAAGGAGTCAAGCTGTCACACAGGGAAGAGAGCCGCGGAGGAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097680.7 ENSMUST00000234626.2 ENSMUST00000234810.2 |
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| CDS GCA 72 bp | CTCCTCAAAGGCACACTGTACACCATCACAGGTTTTTaGACTTGCCTCTATGAACAACATAGAATGCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: LLKGTLYTITGF*TCLYEQHRMLA Trigger: CGCAAGCATTCTATGTTGTTCATAGAGGCAAGTGCAAAAACCTGTGATGGTGTACAGTGTGCCTTTGAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234626.2 ENSMUST00000234810.2 |
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| CDS GCA 72 bp | TGCACTTGCCTCTATGAACAACATAGAATGCTTGCGTaGAAATTTCAAGCCTTCATTTCTATCGACTTCACG | + |
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Preference number: 6 (lower is better) Translates to: CTCLYEQHRMLA*KFQAFISIDFT Trigger: CGTGAAGTCGATAGAAATGAAGGCTTGAAATTTGCACGCAAGCATTCTATGTTGTTCATAGAGGCAAGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234626.2 ENSMUST00000234810.2 |
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| CDS GCA 72 bp | CAGGTTTTTGCACTTGCCTCTATGAACAACATAGAATaGTTGCGTGCAAATTTCAAGCCTTCATTTCTATCG | + |
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Preference number: 6 (lower is better) Translates to: QVFALASMNNIE*LRANFKPSFLS Trigger: CGATAGAAATGAAGGCTTGAAATTTGCACGCAAGCATTCTATGTTGTTCATAGAGGCAAGTGCAAAAACCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234626.2 ENSMUST00000234810.2 |
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| CDS CAA 72 bp | GTTTTTGCACTTGCCTCTATGAACAACATAGAATGCTaGCGTGCAAATTTCAAGCCTTCATTTCTATCGACT | + |
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Preference number: 6 (lower is better) Translates to: VFALASMNNIEC*RANFKPSFLST Trigger: AGTCGATAGAAATGAAGGCTTGAAATTTGCACGCAAGCATTCTATGTTGTTCATAGAGGCAAGTGCAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234626.2 ENSMUST00000234810.2 |
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