Pregenerated sensors for RAB15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021062Ensembl transcript IDs: ENSMUST00000021459.14, ENSMUST00000118604.8, ENSMUST00000121716.8, ENSMUST00000122419.8, ENSMUST00000141622.3, ENSMUST00000154765.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTGAAGTGGCCTTGACTCCAGCCTTGACCGTCGTCCCAGGAGCCTaGGGTGGTCGCAGCACATTCTGGGGTCACAGGAGGCCTGCGGCT | + |
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Preference number: 1 (lower is better) Translates to: LEVALTPALTVVPGA*GGRSTFWGHRRPAA Trigger: AGCCGCAGGCCTCCTGTGACCCCAGAATGTGCTGCGACCACCCCAGGCTCCTGGGACGACGGTCAAGGCTGGAGTCAAGGCCACTTCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CCA 90 bp | CCCTTAGCCTTCAGCCCACCCCGGAGCAGGGTGAACAGTCCTCCCTaGGGCAGAGCCTGGGTCCATTCCCTTAGGCAGAATCAGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: PLAFSPPRSRVNSPP*GRAWVHSLRQNQEG Trigger: TCCTTCCTGATTCTGCCTAAGGGAATGGACCCAGGCTCTGCCCCAGGGAGGACTGTTCACCCTGCTCCGGGGTGGGCTGAAGGCTAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 90 bp | TTGGGACAGCCTGTGCCCTGTAGAAGCTCCCCTCAGGTCCCTGGCTaGAGGCAGGTCTGCTACCGAAGGCTTACTACTACCCAGGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: LGQPVPCRSSPQVPG*RQVCYRRLTTTQES Trigger: TGACTCCTGGGTAGTAGTAAGCCTTCGGTAGCAGACCTGCCTTCAGCCAGGGACCTGAGGGGAGCTTCTACAGGGCACAGGCTGTCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CCA 90 bp | AGTAGTGTTTCCTTCCTACCTCAGTGCTCTACCTTCCCAGGCCACTaGGGAGGCAGCCCACGGCACAAGGAGGAAGAAGCACCCTTAGCC | + |
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Preference number: 1 (lower is better) Translates to: SSVSFLPQCSTFPGH*GGSPRHKEEEAPLA Trigger: GGCTAAGGGTGCTTCTTCCTCCTTGTGCCGTGGGCTGCCTCCCCAGTGGCCTGGGAAGGTAGAGCACTGAGGTAGGAAGGAAACACTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CCA 90 bp | GTAGCAGCTACTGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTaGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: VAATGFQQDCQMKGR*WAKPRLPASTGLLR Trigger: CCTCAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCAGTAGCTGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 90 bp | AGGCTGGGTTCAGTGAAAGAGGAGTGGTTGATTACTTGTCACCTCTaGTGCCCTGTAGTCGCCACAGCACTCGCTGTTCTGCGAAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: RLGSVKEEWLITCHL*CPVVATALAVLRSS Trigger: GGAGCTTCGCAGAACAGCGAGTGCTGTGGCGACTACAGGGCATCAGAGGTGACAAGTAATCAACCACTCCTCTTTCACTGAACCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 90 bp | GGTGTTCTTCATAGCCCAGCCTCCTTCTGTTGCTATACTTCAGGGTaGCCACGGTACAGAGTCACAGCCCCGAATTCCCTCCCAGAATCC | + |
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Preference number: 1 (lower is better) Translates to: GVLHSPASFCCYTSG*PRYRVTAPNSLPES Trigger: GGATTCTGGGAGGGAATTCGGGGCTGTGACTCTGTACCGTGGTCACCCTGAAGTATAGCAACAGAAGGAGGCTGGGCTATGAAGAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 90 bp | AAGAAGAGAAAAAGCAGAGAGCCCACGAGATGCACTAAGGAATCTTaGAGTGGCCTTGACTCCAGCCTTGACCGTCGTCCCAGGAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: KKRKSREPTRCTKES*SGLDSSLDRRPRSL Trigger: CAGGCTCCTGGGACGACGGTCAAGGCTGGAGTCAAGGCCACTTCAAGATTCCTTAGTGCATCTCGTGGGCTCTCTGCTTTTTCTCTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CCA 90 bp | AAAATCAAGTCCTTTCTTAAGAGGCTGGGACAAGACAGTGACACTTaGGACAGCCTGTGCCCTGTAGAAGCTCCCCTCAGGTCCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: KIKSFLKRLGQDSDT*DSLCPVEAPLRSLA Trigger: AGCCAGGGACCTGAGGGGAGCTTCTACAGGGCACAGGCTGTCCCAAGTGTCACTGTCTTGTCCCAGCCTCTTAAGAAAGGACTTGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 90 bp | GTGAATCCAGGTGAGGAGAGAGGCATGGGAGGTAGAGAACAGAGGTaGCTTAATCCCTGCCACCCCATCGTTTCTTTCGTTTTCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: VNPGEERGMGGREQR*LNPCHPIVSFVFLL Trigger: GAGAAGGAAAACGAAAGAAACGATGGGGTGGCAGGGATTAAGTCACCTCTGTTCTCTACCTCCCATGCCTCTCTCCTCACCTGGATTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 90 bp | AATGGACTATTGTTCCCGGCTCCTTTTCCCTCCACCAGTAAATCCTaGGCTGTTCTCTTCTGCCTGCTTCCTTGTTTGCTAAGTCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: NGLLFPAPFPSTSKS*AVLFCLLPCLLSQG Trigger: TCCCTGACTTAGCAAACAAGGAAGCAGGCAGAAGAGAACAGCTCAGGATTTACTGGTGGAGGGAAAAGGAGCCGGGAACAATAGTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 90 bp | TTTGTTTGTTTGTTTGTTTTTCAGGGGCCTCCTTCAAGCTACTCTTaGACCACAGGGTTAAAGAAACTTCCTGAGCATAGAACTCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: FVCLFVFQGPPSSYS*TTGLKKLPEHRTLE Trigger: CTCCAGAGTTCTATGCTCAGGAAGTTTCTTTAACCCTGTGGTTCAAGAGTAGCTTGAAGGAGGCCCCTGAAAAACAAACAAACAAACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTCAGCCCACCCCGGAGCAGGGTGAACAGTCCTCCCTGGGGCAGAGCCTGCAAGGGAGGAGAGACTaGGATGATAGGGGATGCGAA | + |
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Preference number: 2 (lower is better) Translates to: SLQPTPEQGEQSSLGQSLQGRRD*DDRGCE Trigger: TTCGCATCCCCTATCATCCCAGTCTCTCCTCCCTTG...CAGGCTCTGCCCCAGGGAGGACTGTTCACCCTGCTCCGGGGTGGGCTGAAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR GCA 90 bp | CTGTGCCCTGTAGAAGCTCCCCTCAGGTCCCTGGCTGAAGGCAGGTCTGCTACCCTTCTCTGCTGTGCCTaGCTCTGGACTCAGTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LCPVEAPLRSLAEGRSATLLCCA*LWTQFL Trigger: GAGGAACTGAGTCCAGAGGCAGGCACAGCAGAGAAG...GGTAGCAGACCTGCCTTCAGCCAGGGACCTGAGGGGAGCTTCTACAGGGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CAA 90 bp | AAAGCAGAGAGCCCACGAGATGCACTAAGGAATCTTGAAGTGGCCTaGACTCCAGCCTTGACCGTCGTCCCAGGAGCCTGGGGTGGTCGC | + |
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Preference number: 2 (lower is better) Translates to: KAESPRDALRNLEVA*TPALTVVPGAWGGR Trigger: GCGACCACCCCAGGCTCCTGGGACGACGGTCAAGGCTGGAGTCAAGGCCACTTCAAGATTCCTTAGTGCATCTCGTGGGCTCTCTGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR CCA 90 bp | GGCAAACTCCAGAACAGAGCAAGCACAGGTGTTCTTCATAGCCCAGCCTCCTTCCCCAGGAGCCTGGGGTaGTCGCAGCACATTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GKLQNRASTGVLHSPASFPRSLG*SQHILG Trigger: CCCCAGAATGTGCTGCGACCACCCCAGGCTCCTGGG...GAAGGAGGCTGGGCTATGAAGAACACCTGTGCTTGCTCTGTTCTGGAGTTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR GCA 90 bp | GTATCTGACCCCAGGGCTCCCCTTGCCCTTTGGTGTCCTCAGACCTCGATCCCCTTCGTTTTCCTTCTCTaGTGTGCCTGCCTCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: VSDPRAPLALWCPQTSIPFVFLL*CACLWT Trigger: AGTCCAGAGGCAGGCACAGCAGAGAAGGAAAACGAA...GGGGATCGAGGTCTGAGGACACCAAAGGGCAAGGGGAGCCCTGGGGTCAGATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCTCCCACCTTGGGAATGTAAGGATGAACCCTACCAGGGTTGGCTTTGTTCTGAGGGAAGGGGGCTaGGGGGACTCCACTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SSSHLGNVRMNPTRVGFVLREGG*GDSTQN Trigger: GTTCTGAGTGGAGTCCCCCCAGCCCCCTTCCCTCAG...AACAAAGCCAACCCTGGTAGGGTTCATCCTTACATTCCCAAGGTGGGAGGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CAA 90 bp | CCTTGGTCCTTGAATGCTCGGTCAGTGCCTAGTTCTTCCTCTGCTTaGGCTCCAGCCCCAGGCTTGAAGTGCATCTTGGGACTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PWSLNARSVPSSSSA*APAPGLKCILGLFS Trigger: AGAGAAGAGTCCCAAGATGCACTTCAAGCCTGGGGCTGGAGCCAAAGCAGAGGAAGAACTAGGCACTGACCGAGCATTCAAGGACCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR TCA 90 bp | ATAAGGGAACCAGGGGGAGGGAGTCCTGGAAGGCAGAACAGCACCAAGTATTTCGGCTGGGAAACAGGCTaGAAGGTCACCACTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: IREPGGGSPGRQNSTKYFGWETG*KVTTPE Trigger: TTCTGGAGTGGTGACCTTTCAGCCTGTTTCCCAGCC...GAAATACTTGGTGCTGTTCTGCCTTCCAGGACTCCCTCCCCCTGGTTCCCTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR TCA 90 bp | GGCAAACTCCAGAACAGAGCAAGCACAGGTGTTCTTCATAGCCCAGCCTCCTTCGACTCTTCTCTTACCTaGGCTCCTCCCACCTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GKLQNRASTGVLHSPASFDSSLT*APPTLG Trigger: TCCCAAGGTGGGAGGAGCTCAGGTAAGAGAAGAGTC...GAAGGAGGCTGGGCTATGAAGAACACCTGTGCTTGCTCTGTTCTGGAGTTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR GCA 90 bp | GAGGCATGGGAGGTAGAGAACAGAGGTGACTTAATCCCTGCCACCCCATCGTTTTCCTTCCTACCTCAGTaGTCTACCTTCCCAGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: EAWEVENRGDLIPATPSFSFLPQ*STFPGH Trigger: GTGGCCTGGGAAGGTAGAGCACTGAGGTAGGAAGGA...AAACGATGGGGTGGCAGGGATTAAGTCACCTCTGTTCTCTACCTCCCATGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR CCA 90 bp | TGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCTGAGGGAAGGGGGCTaGGGGGACTCCACTCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: WFSTGLSNERTVVGKAQTLREGG*GDSTQN Trigger: GTTCTGAGTGGAGTCCCCCCAGCCCCCTTCCCTCAG...AGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTGAAAGAGGAGTGGTTGATTACTTGTCACCTCTGATGCCCTGTAGTCGCGTGAACAGTCCTCCCTaGGGCAGAGCCTGGGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: FSERGVVDYLSPLMPCSRVNSPP*GRAWVH Trigger: ATGGACCCAGGCTCTGCCCCAGGGAGGACTGTTCAC...GCGACTACAGGGCATCAGAGGTGACAAGTAATCAACCACTCCTCTTTCACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CAA 90 bp | CTAAAGAGGTGTGGGGCTCTCTGTCATCACAGCTGTGCCCTGGATTaGAAAGGACCTTGGTCCTTGAATGCTCGGTCAGTGCCTAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LKRCGALCHHSCALD*KGPWSLNARSVPSS Trigger: AGAACTAGGCACTGACCGAGCATTCAAGGACCAAGGTCCTTTCAAATCCAGGGCACAGCTGTGATGACAGAGAGCCCCACACCTCTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR GCA 90 bp | GCAGAACAGCACCAAGTATTTCCATCATACCCACCCTTCTCTTCCCTTGTCTTAAGCTCCCTCTGCTCTTaGTCTAACCCTGGTTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: AEQHQVFPSYPPFSSLVLSSLCS*SNPGSR Trigger: CCTAGAACCAGGGTTAGAGCAAGAGCAGAGGGAGCT...TAAGACAAGGGAAGAGAAGGGTGGGTATGATGGAAATACTTGGTGCTGTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR CCA 90 bp | CACAATTCATATAATGGACCCAAGACACAGTACACAAAGGTCACCCATCACAGGGCTCTTGCCTCTATCTaGAGTTCACAGCTGACTATA | + |
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Preference number: 2 (lower is better) Translates to: HNSYNGPKTQYTKVTHHRALASI*SSQLTI Trigger: TATAGTCAGCTGTGAACTCCAGATAGAGGCAAGAGC...CCTGTGATGGGTGACCTTTGTGTACTGTGTCTTGGGTCCATTATATGAATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR GCA 72 bp | AATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTaGCTCCACGGGCCTCCTGAGGGAAGGGGGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: NERTVVGKAQTP*LHGPPEGRGLG Trigger: CCCCAGCCCCCTTCCCTCAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| 3UTR CCA 72 bp | GACTCCAGCCTTGACCGTCGTCCCAGGAGCCTGGGGTaGTCGCAGCACATTCTGGGGTCACAGGAGGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: DSSLDRRPRSLG*SQHILGSQEAC Trigger: GCAGGCCTCCTGTGACCCCAGAATGTGCTGCGACCACCCCAGGCTCCTGGGACGACGGTCAAGGCTGGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 72 bp | CTGGGGTCACAGGAGGCCTGCGGCTGGGAAACAGGCTaGAAGGTCACCACTCCAGAATTAGAGGGGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: LGSQEACGWETG*KVTTPELEGLG Trigger: CCCCAGCCCCTCTAATTCTGGAGTGGTGACCTTTCAGCCTGTTTCCCAGCCGCAGGCCTCCTGTGACCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 72 bp | CCTGTGCCCTGTAGAAGCTCCCCTCAGGTCCCTGGCTaGAGGCAGGTCTGCTACCGAAGGCTTACTACTACC | + |
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Preference number: 3 (lower is better) Translates to: PVPCRSSPQVPG*RQVCYRRLTTT Trigger: GGTAGTAGTAAGCCTTCGGTAGCAGACCTGCCTTCAGCCAGGGACCTGAGGGGAGCTTCTACAGGGCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CCA 72 bp | CGGAGCAGGGTGAACAGTCCTCCCTGGGGCAGAGCCTaGGTCCATTCCCTTAGGCAGAATCAGGAAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: RSRVNSPPWGRA*VHSLRQNQEGK Trigger: TTTTCCTTCCTGATTCTGCCTAAGGGAATGGACCCAGGCTCTGCCCCAGGGAGGACTGTTCACCCTGCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CCA 72 bp | GGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTaGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: GFQQDCQMKGRW*AKPRLPASTGL Trigger: GAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| 3UTR CCA 72 bp | GCGCTTGGCAGGACACACAGACAAGGGAGGAGAGACTaGGATGATAGGGGATGCGAATTACAAGGGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: ALGRTHRQGRRD*DDRGCELQGRG Trigger: TCCCCTCCCTTGTAATTCGCATCCCCTATCATCCCAGTCTCTCCTCCCTTGTCTGTGTGTCCTGCCAAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTGAAAGAGGAGTGGTTGATTACTTGTCACCTCTGATGCCCTGTAGTCGCGCCTTGACTCCAGCCTaGACCGTCGTCCCAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: FSERGVVDYLSPLMPCSRALTPA*TVVPGA Trigger: GGCTCCTGGGACGACGGTCAAGGCTGGAGTCAAGGC...GCGACTACAGGGCATCAGAGGTGACAAGTAATCAACCACTCCTCTTTCACTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 72 bp | CATAGCCCAGCCTCCTTCTGTTGCTATACTTCAGGGTaGCCACGGTACAGAGTCACAGCCCCGAATTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: HSPASFCCYTSG*PRYRVTAPNSL Trigger: GAGGGAATTCGGGGCTGTGACTCTGTACCGTGGTCACCCTGAAGTATAGCAACAGAAGGAGGCTGGGCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 72 bp | CACAGCCCAAGCCACATCCCAGACTGGCAGTTAGGGTaGGGCAAACTCCAGAACAGAGCAAGCACAGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: HSPSHIPDWQLG*GKLQNRASTGV Trigger: AACACCTGTGCTTGCTCTGTTCTGGAGTTTGCCTCACCCTAACTGCCAGTCTGGGATGTGGCTTGGGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR GCA 72 bp | TCTTCCTCTGCTTTGGCTCCAGCCCCAGGCTTGAAGTaGATCTTGGGACTCTTCTCTTACCTGAGCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: SSSALAPAPGLK*ILGLFSYLSSS Trigger: GGAGGAGCTCAGGTAAGAGAAGAGTCCCAAGATGCACTTCAAGCCTGGGGCTGGAGCCAAAGCAGAGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CCA 72 bp | ACTGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTaGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGC | + |
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Preference number: 3 (lower is better) Translates to: TGFQQDCQMKGR*WAKPRLPASTG Trigger: GCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| 3UTR CCA 72 bp | TCCTTTCTTAAGAGGCTGGGACAAGACAGTGACACTTaGGACAGCCTGTGCCCTGTAGAAGCTCCCCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: SFLKRLGQDSDT*DSLCPVEAPLR Trigger: CCTGAGGGGAGCTTCTACAGGGCACAGGCTGTCCCAAGTGTCACTGTCTTGTCCCAGCCTCTTAAGAAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR-3UTR CAA 90 bp | GGCAAACTCCAGAACAGAGCAAGCACAGGTGTTCTTCATAGCCCAGCCTCCTTCAGCTGTGCCCTGGATTaGAAAGGACCTTGGTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: GKLQNRASTGVLHSPASFSCALD*KGPWSL Trigger: CAAGGACCAAGGTCCTTTCAAATCCAGGGCACAGCT...GAAGGAGGCTGGGCTATGAAGAACACCTGTGCTTGCTCTGTTCTGGAGTTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 72 bp | GGTGAGGAGAGAGGCATGGGAGGTAGAGAACAGAGGTaGCTTAATCCCTGCCACCCCATCGTTTCTTTCGTT | + |
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Preference number: 3 (lower is better) Translates to: GEERGMGGREQR*LNPCHPIVSFV Trigger: AACGAAAGAAACGATGGGGTGGCAGGGATTAAGTCACCTCTGTTCTCTACCTCCCATGCCTCTCTCCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 72 bp | TCAGTGAAAGAGGAGTGGTTGATTACTTGTCACCTCTaGTGCCCTGTAGTCGCCACAGCACTCGCTGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: SVKEEWLITCHL*CPVVATALAVL Trigger: CAGAACAGCGAGTGCTGTGGCGACTACAGGGCATCAGAGGTGACAAGTAATCAACCACTCCTCTTTCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CCA 72 bp | CCAGTCTTCACAACACTGTTTCTCTTTAGCGAACAATaGACTATTGTTCCCGGCTCCTTTTCCCTCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: PVFTTLFLFSEQ*TIVPGSFSLHQ Trigger: CTGGTGGAGGGAAAAGGAGCCGGGAACAATAGTCCATTGTTCGCTAAAGAGAAACAGTGTTGTGAAGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR TCA 72 bp | TTGTTTGTTTTTCAGGGGCCTCCTTCAAGCTACTCTTaGACCACAGGGTTAAAGAAACTTCCTGAGCATAGA | + |
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Preference number: 3 (lower is better) Translates to: LFVFQGPPSSYS*TTGLKKLPEHR Trigger: TCTATGCTCAGGAAGTTTCTTTAACCCTGTGGTTCAAGAGTAGCTTGAAGGAGGCCCCTGAAAAACAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| 3UTR CCA 72 bp | CCACCTTGGGAATGTAAGGATGAACCCTACCAGGGTTaGCTTTGTTTGTTTGTTTGTTTGTTTGTTTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: PPWECKDEPYQG*LCLFVCLFVFQ Trigger: CTGAAAAACAAACAAACAAACAAACAAACAAAGCCAACCCTGGTAGGGTTCATCCTTACATTCCCAAGGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| CDS-3UTR GCA 90 bp | GGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGAGGGAACTCCAGCTCGGCCAGTaGGAGCTCGTTGCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: GRWWAKPRLPASTGLLRELQLGQ*ELVAGT Trigger: CGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAG...TTCCCTCAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGAGGTCCAGCTCTTTCCTGTaGGCCTGCAGCACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGRWWAKPRLPASTGLLRSSSFL*ACSTSS Trigger: GGAGCTGGTGCTGCAGGCCCACAGGAAAGAGCTGGA...CCTCAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGAGGGCACCAGCAGGTCTTTaGAGAGTTTGCTGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGRWWAKPRLPASTGLLRAPAGL*RVCWAL Trigger: GAGGGCCCAGCAAACTCTTCAAAGACCTGCTGGTGC...CCTCAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGTACTCCTTAGCCAGCTaGTGCCCCTGCTCTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MKGRWWAKPRLPASTGLLYSLAS*CPCSLP Trigger: GGGGAGAGAGCAGGGGCAGCAGCTGGCTAAGGAGTA...CAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGAGGTCTTTCCTGTGGGCCTaGAGCACCAGCTCCGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KGRWWAKPRLPASTGLLRSFLWA*STSSVR Trigger: TCTGACGGAGCTGGTGCTGCAGGCCCACAGGAAAGA...CCTCAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | TGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCAGCTCGGCCAGTaGGAGCTCGTTGCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CQMKGRWWAKPRLPASTGLQLGQ*ELVAGT Trigger: CGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAG...GCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTTCAGCCCACCCCGGAGCAGGGTGAACAGTCCTCCCTGGGGCAGAGCCTGTGCTCTCTCCCCACCTaGCGTTTCTGCTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQPTPEQGEQSSLGQSLCSLPT*RFCSSS Trigger: TGATGAAGAGCAGAAACGGCAGGTGGGGAGAGAGCA...CAGGCTCTGCCCCAGGGAGGACTGTTCACCCTGCTCCGGGGTGGGCTGAAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| CDS-3UTR GCA 90 bp | ATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGTCTTTCCTGTGGGCCTaGAGCACCAGCTCCGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MKGRWWAKPRLPASTGLLSFLWA*STSSVR Trigger: TCTGACGGAGCTGGTGCTGCAGGCCCACAGGAAAGA...CAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | GTATCTGACCCCAGGGCTCCCCTTGCCCTTTGGTGTCCTCAGACCTCGATCCCCCTGGGCCCTCAGGTTTaGCTTCGTCCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSDPRAPLALWCPQTSIPLGPQV*LRPPPA Trigger: AGCTGGAGGAGGACGAAGGCAAACCTGAGGGCCCAG...GGGGATCGAGGTCTGAGGACACCAAAGGGCAAGGGGAGCCCTGGGGTCAGATAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| 3UTR CAA 72 bp | GCACTAAGGAATCTTGAAGTGGCCTTGACTCCAGCCTaGACCGTCGTCCCAGGAGCCTGGGGTGGTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALRNLEVALTPA*TVVPGAWGGRS Trigger: GCTGCGACCACCCCAGGCTCCTGGGACGACGGTCAAGGCTGGAGTCAAGGCCACTTCAAGATTCCTTAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| CDS-3UTR GCA 90 bp | GAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGAGGTACCTCTCCTGCCCTaGTGTGTCCCAAATCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ERTVVGKAQTPCLHGPPEVPLLP*CVPNLY Trigger: ATACAGATTTGGGACACAGCAGGGCAGGAGAGGTAC...CTCAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGTGCTCTCTCCCCACCTaGCGTTTCTGCTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: MKGRWWAKPRLPASTGLLCSLPT*RFCSSS Trigger: TGATGAAGAGCAGAAACGGCAGGTGGGGAGAGAGCA...CAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | CAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCCTCCAGCTCGGCCAGTaGGAGCTCGTTGCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: QQDCQMKGRWWAKPRLPALQLGQ*ELVAGT Trigger: CGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAG...GGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGAGTGCTTTGTGATAGTCTaGTACCTCTCCTGCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERTVVGKAQTPCLHGPPECFVIV*YLSCPA Trigger: AGCAGGGCAGGAGAGGTACCAGACTATCACAAAGCA...CTCAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGGAGATATGCGAGGAGTaGAACTCGTTGTCGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MKGRWWAKPRLPASTGLLEICEE*NSLSVK Trigger: CTTCACCGACAACGAGTTCCACTCCTCGCATATCTC...CAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| CDS-3UTR GCA 90 bp | ACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCACAGCAGGCATGTCTTaGCAACCCCGGAGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TGLSNERTVVGKAQTPCLTAGMS*QPRSPR Trigger: TCGGGGACTCCGGGGTTGGCAAGACATGCCTGCTGT...GAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| CDS-3UTR GCA 90 bp | ACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCTGGGCCCTCAGGTTTaGCTTCGTCCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGLSNERTVVGKAQTPCLLGPQV*LRPPPA Trigger: AGCTGGAGGAGGACGAAGGCAAACCTGAGGGCCCAG...GAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR TCA 90 bp | CAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCGCACCAGCAGGTCTTTaGAGAGTTTGCTGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQDCQMKGRWWAKPRLPAAPAGL*RVCWAL Trigger: GAGGGCCCAGCAAACTCTTCAAAGACCTGCTGGTGC...GGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR CCA 90 bp | CAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCCAATTAGGATCTTCTaGACTCCTTCTGGAGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QMKGRWWAKPRLPASTGLPIRIF*TPSGAY Trigger: GTACGCTCCAGAAGGAGTCCAGAAGATCCTAATTGG...GAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR TCA 90 bp | TCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCGCACCAGCAGGTCTTTaGAGAGTTTGCTGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STGLSNERTVVGKAQTPCAPAGL*RVCWAL Trigger: GAGGGCCCAGCAAACTCTTCAAAGACCTGCTGGTGC...GCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | TCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCTCTTTCCTGTGGGCCTaGAGCACCAGCTCCGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STGLSNERTVVGKAQTPCSFLWA*STSSVR Trigger: TCTGACGGAGCTGGTGCTGCAGGCCCACAGGAAAGA...GCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR CCA 90 bp | AGCACATTCTGGGGTCACAGGAGGCCTGCGGCTGGGAAACAGGCTGAAAGGTCAAGTCAACACCGATGGTaGAGATATGCGAGGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: STFWGHRRPAAGKQAERSSQHRW*RYARSG Trigger: TCCACTCCTCGCATATCTCCACCATCGGTGTTGACT...TGACCTTTCAGCCTGTTTCCCAGCCGCAGGCCTCCTGTGACCCCAGAATGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCTGCCTCTGGACTCAGTTCCTCACAGAGGCACAGAGGCAGCCAGGCAACCAATTAGGATCTTCTaGACTCCTTCTGGAGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLPLDSVPHRGTEAARQPIRIF*TPSGAY Trigger: GTACGCTCCAGAAGGAGTCCAGAAGATCCTAATTGG...TTGCCTGGCTGCCTCTGTGCCTCTGTGAGGAACTGAGTCCAGAGGCAGGCACAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGTAGAGAACAGAGGTGACTTAATCCCTGCCACCCCATCGTTTCTTTCGTCCAGCTCTTTCCTGTaGGCCTGCAGCACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WEVENRGDLIPATPSFLSSSSFL*ACSTSS Trigger: GGAGCTGGTGCTGCAGGCCCACAGGAAAGAGCTGGA...CGAAAGAAACGATGGGGTGGCAGGGATTAAGTCACCTCTGTTCTCTACCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| CDS-3UTR GCA 90 bp | TTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTACTCCTTAGCCAGCTaGTGCCCCTGCTCTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTGLSNERTVVGKAQTPYSLAS*CPCSLP Trigger: GGGGAGAGAGCAGGGGCAGCAGCTGGCTAAGGAGTA...GGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTTCCAGCTCTTTCCTGTaGGCCTGCAGCACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQQDCQMKGRWWAKPRLPSSSFL*ACSTSS Trigger: GGAGCTGGTGCTGCAGGCCCACAGGAAAGAGCTGGA...AGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTCCAGCTCTTTCCTGTaGGCCTGCAGCACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSTGLSNERTVVGKAQTPSSSFL*ACSTSS Trigger: GGAGCTGGTGCTGCAGGCCCACAGGAAAGAGCTGGA...GGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| 3UTR CAA 72 bp | CCTAGTTCTTCCTCTGCTTTGGCTCCAGCCCCAGGCTaGAAGTGCATCTTGGGACTCTTCTCTTACCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSSSALAPAPG*KCILGLFSYLS Trigger: GCTCAGGTAAGAGAAGAGTCCCAAGATGCACTTCAAGCCTGGGGCTGGAGCCAAAGCAGAGGAAGAACTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| 3UTR CAA 72 bp | TTGAATGCTCGGTCAGTGCCTAGTTCTTCCTCTGCTTaGGCTCCAGCCCCAGGCTTGAAGTGCATCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNARSVPSSSSA*APAPGLKCILG Trigger: TCCCAAGATGCACTTCAAGCCTGGGGCTGGAGCCAAAGCAGAGGAAGAACTAGGCACTGACCGAGCATTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| 3UTR CAA 72 bp | TGTGGGGCTCTCTGTCATCACAGCTGTGCCCTGGATTaGAAAGGACCTTGGTCCTTGAATGCTCGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CGALCHHSCALD*KGPWSLNARSV Trigger: CACTGACCGAGCATTCAAGGACCAAGGTCCTTTCAAATCCAGGGCACAGCTGTGATGACAGAGAGCCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGAAAGAGGAGTGGTTGATTACTTGTCACCTCTGATGCCCTGTAGTCGCGGAACTCGTTGTCGGTaGAGCGGCACAGCAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FSERGVVDYLSPLMPCSRGTRCR*SGTAGM Trigger: CATGCCTGCTGTGCCGCTTCACCGACAACGAGTTCC...GCGACTACAGGGCATCAGAGGTGACAAGTAATCAACCACTCCTCTTTCACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| CDS-3UTR GCA 90 bp | TCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCTGCTCTCTCCCCACCTaGCGTTTCTGCTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: STGLSNERTVVGKAQTPCCSLPT*RFCSSS Trigger: TGATGAAGAGCAGAAACGGCAGGTGGGGAGAGAGCA...GCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGATACTCCTTAGCCAGCTaGTGCCCCTGCTCTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQDCQMKGRWWAKPRYSLAS*CPCSLP Trigger: GGGGAGAGAGCAGGGGCAGCAGCTGGCTAAGGAGTA...TCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCTGGGCCCTCAGGTTTaGCTTCGTCCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WFSTGLSNERTVVGKAQTLGPQV*LRPPPA Trigger: AGCTGGAGGAGGACGAAGGCAAACCTGAGGGCCCAG...AGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTGGGCCCTCAGGTTTaGCTTCGTCCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQDCQMKGRWWAKPRLGPQV*LRPPPA Trigger: AGCTGGAGGAGGACGAAGGCAAACCTGAGGGCCCAG...TCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| 3UTR CAA 72 bp | CACAGCTGTGCCCTGGATTTGAAAGGACCTTGGTCCTaGAATGCTCGGTCAGTGCCTAGTTCTTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSCALDLKGPWS*NARSVPSSSSA Trigger: AGCAGAGGAAGAACTAGGCACTGACCGAGCATTCAAGGACCAAGGTCCTTTCAAATCCAGGGCACAGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
||
| CDS-3UTR TCA 90 bp | TACTGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGGCACCAGCAGGTCTTTaGAGAGTTTGCTGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YWFSTGLSNERTVVGKAQAPAGL*RVCWAL Trigger: GAGGGCCCAGCAAACTCTTCAAAGACCTGCTGGTGC...CTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | TCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCCCACCTGCCGTTTCTaGTCTTCATCAGCCTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: STGLSNERTVVGKAQTPCPTCRF*SSSALF Trigger: GAATAAGGCTGATGAAGAGCAGAAACGGCAGGTGGG...GCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGTACCTCTCCTGCCCTaGTGTGTCCCAAATCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FQQDCQMKGRWWAKPRLPVPLLP*CVPNLY Trigger: ATACAGATTTGGGACACAGCAGGGCAGGAGAGGTAC...AGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGATGCTCTCTCCCCACCTaGCGTTTCTGCTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQDCQMKGRWWAKPRCSLPT*RFCSSS Trigger: TGATGAAGAGCAGAAACGGCAGGTGGGGAGAGAGCA...TCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTGTACCTCTCCTGCCCTaGTGTGTCCCAAATCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: WFSTGLSNERTVVGKAQTVPLLP*CVPNLY Trigger: ATACAGATTTGGGACACAGCAGGGCAGGAGAGGTAC...AGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGAAAGAGGAGTGGTTGATTACTTGTCACCTCTGATGCCCTGTAGTCGCTGCTTTGTGATAGTCTaGTACCTCTCCTGCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSERGVVDYLSPLMPCSRCFVIV*YLSCPA Trigger: AGCAGGGCAGGAGAGGTACCAGACTATCACAAAGCA...GCGACTACAGGGCATCAGAGGTGACAAGTAATCAACCACTCCTCTTTCACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| CDS-3UTR CCA 90 bp | ACTGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGATGCTTTGTGATAGTCTaGTACCTCTCCTGCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQDCQMKGRWWAKPRCFVIV*YLSCPA Trigger: AGCAGGGCAGGAGAGGTACCAGACTATCACAAAGCA...TCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CCA 90 bp | TTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTCCAATTAGGATCTTCTaGACTCCTTCTGGAGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: FQQDCQMKGRWWAKPRLPPIRIF*TPSGAY Trigger: GTACGCTCCAGAAGGAGTCCAGAAGATCCTAATTGG...AGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CCA 90 bp | TTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCCCAATTAGGATCTTCTaGACTCCTTCTGGAGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: FSTGLSNERTVVGKAQTPPIRIF*TPSGAY Trigger: GTACGCTCCAGAAGGAGTCCAGAAGATCCTAATTGG...GGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS GCA 90 bp | CAGGTTTGCCTTCGTCCTCCTCCAGCTCGGCCAGTGCGAGCTCGTTaGTGGCACGTGTTCGGAGACCATCCAGCTCTTTCCTGTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: QVCLRPPPARPVRAR*WHVFGDHPALSCGP Trigger: AGGCCCACAGGAAAGAGCTGGATGGTCTCCGAACACGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAGGAGGACGAAGGCAAACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS GCA 90 bp | TGCTGGGCCCTCAGGTTTGCCTTCGTCCTCCTCCAGCTCGGCCAGTaGGAGCTCGTTGCTGGCACGTGTTCGGAGACCATCCAGCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: CWALRFAFVLLQLGQ*ELVAGTCSETIQLF Trigger: AAAGAGCTGGATGGTCTCCGAACACGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAGGAGGACGAAGGCAAACCTGAGGGCCCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS CCA 90 bp | GTTTGCCTTCGTCCTCCTCCAGCTCGGCCAGTGCGAGCTCGTTGCTaGCACGTGTTCGGAGACCATCCAGCTCTTTCCTGTGGGCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: VCLRPPPARPVRARC*HVFGDHPALSCGPA Trigger: TGCAGGCCCACAGGAAAGAGCTGGATGGTCTCCGAACACGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAGGAGGACGAAGGCAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | AAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGAGGGGTTGGTGCAGGCACTaGTTTCGTAGAAGTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: KGRWWAKPRLPASTGLLRGWCRH*FRRSPC Trigger: GCATGGACTTCTACGAAACAAGTGCCTGCACCAACC...CCTCAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | GTATCTGACCCCAGGGCTCCCCTTGCCCTTTGGTGTCCTCAGACCTCGATCCCCAGCACCAGCAGGTCTTaGAAGAGTTTGCTGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSDPRAPLALWCPQTSIPSTSRS*KSLLGP Trigger: AGGGCCCAGCAAACTCTTCAAAGACCTGCTGGTGCT...GGGGATCGAGGTCTGAGGACACCAAAGGGCAAGGGGAGCCCTGGGGTCAGATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| CDS-3UTR CAA 90 bp | CAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCGGTTGGTGCAGGCACTaGTTTCGTAGAAGTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: QMKGRWWAKPRLPASTGLGWCRH*FRRSPC Trigger: GCATGGACTTCTACGAAACAAGTGCCTGCACCAACC...GAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS CCA 90 bp | AGCTCGTTGCTGGCACGTGTTCGGAGACCATCCAGCTCTTTCCTGTaGGCCTGCAGCACCAGCTCCGTCAGACGAGTGAAGGACTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSLLARVRRPSSSFL*ACSTSSVRRVKDSL Trigger: TAAAGAGTCCTTCACTCGTCTGACGGAGCTGGTGCTGCAGGCCCACAGGAAAGAGCTGGATGGTCTCCGAACACGTGCCAGCAACGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | AAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCCTGAGGATCTGTATTCTCACTTaGATGCCGTCTACTTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: KGRWWAKPRLPASTGLLRICILT*MPSTSI Trigger: TATCGAAGTAGACGGCATCAAAGTGAGAATACAGAT...CCTCAGGAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | GCAGAACAGCACCAAGTATTTCCATCATACCCACCCTTCTCTTCCCTTGTCTTACACAGCAGGCATGTCTaGCCAACCCCGGAGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AEQHQVFPSYPPFSSLVLHSRHV*PTPESP Trigger: CGGGGACTCCGGGGTTGGCAAGACATGCCTGCTGTG...TAAGACAAGGGAAGAGAAGGGTGGGTATGATGGAAATACTTGGTGCTGTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| CDS-3UTR CAA 90 bp | TCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCAGCACCAGCAGGTCTTaGAAGAGTTTGCTGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: STGLSNERTVVGKAQTPCSTSRS*KSLLGP Trigger: AGGGCCCAGCAAACTCTTCAAAGACCTGCTGGTGCT...GCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS GCA 90 bp | TTGCTGGCACGTGTTCGGAGACCATCCAGCTCTTTCCTGTGGGCCTaGAGCACCAGCTCCGTCAGACGAGTGAAGGACTCTTTAATATTA | + |
|
Preference number: 5 (lower is better) Translates to: LLARVRRPSSSFLWA*STSSVRRVKDSLIL Trigger: TAATATTAAAGAGTCCTTCACTCGTCTGACGGAGCTGGTGCTGCAGGCCCACAGGAAAGAGCTGGATGGTCTCCGAACACGTGCCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | GTAGAGAACAGAGGTGACTTAATCCCTGCCACCCCATCGTTTCTTTCGTTTTCCGAGGAGTGGAACTCGTaGTCGGTGAAGCGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VENRGDLIPATPSFLSFSEEWNS*SVKRHS Trigger: GCTGTGCCGCTTCACCGACAACGAGTTCCACTCCTC...GGAAAACGAAAGAAACGATGGGGTGGCAGGGATTAAGTCACCTCTGTTCTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| CDS-3UTR CAA 90 bp | CTGTGCCCTGTAGAAGCTCCCCTCAGGTCCCTGGCTGAAGGCAGGTCTGCTACCATCTGTATTCTCACTTaGATGCCGTCTACTTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: LCPVEAPLRSLAEGRSATICILT*MPSTSI Trigger: TATCGAAGTAGACGGCATCAAAGTGAGAATACAGAT...GGTAGCAGACCTGCCTTCAGCCAGGGACCTGAGGGGAGCTTCTACAGGGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| CDS-3UTR CAA 90 bp | CAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCCTCTCTTTAATATTAAGGTaGGTGCAGGCACTTGTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QMKGRWWAKPRLPASTGLSLILR*VQALVS Trigger: CGAAACAAGTGCCTGCACCAACCTTAATATTAAAGA...GAGGCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | TGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTGCCTCCACGGGCATCTGTATTCTCACTTaGATGCCGTCTACTTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: CQMKGRWWAKPRLPASTGICILT*MPSTSI Trigger: TATCGAAGTAGACGGCATCAAAGTGAGAATACAGAT...GCCCGTGGAGGCAGGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | TTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCGGTTGGTGCAGGCACTaGTTTCGTAGAAGTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: FSTGLSNERTVVGKAQTPGWCRH*FRRSPC Trigger: GCATGGACTTCTACGAAACAAGTGCCTGCACCAACC...GGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | ACTGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGAAGCACCAGCAGGTCTTaGAAGAGTTTGCTGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGFQQDCQMKGRWWAKPRSTSRS*KSLLGP Trigger: AGGGCCCAGCAAACTCTTCAAAGACCTGCTGGTGCT...TCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | TGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTAGCACCAGCAGGTCTTaGAAGAGTTTGCTGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WFSTGLSNERTVVGKAQTSTSRS*KSLLGP Trigger: AGGGCCCAGCAAACTCTTCAAAGACCTGCTGGTGCT...AGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | ACTGGTTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGAGGTTGGTGCAGGCACTaGTTTCGTAGAAGTCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: TGFQQDCQMKGRWWAKPRGWCRH*FRRSPC Trigger: GCATGGACTTCTACGAAACAAGTGCCTGCACCAACC...TCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAACCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | TTTTCAACAGGATTGTCAAATGAAAGGACGGTGGTGGGCAAAGCCCAGACTCCCTCTTTAATATTAAGGTaGGTGCAGGCACTTGTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FSTGLSNERTVVGKAQTPSLILR*VQALVS Trigger: CGAAACAAGTGCCTGCACCAACCTTAATATTAAAGA...GGGAGTCTGGGCTTTGCCCACCACCGTCCTTTCATTTGACAATCCTGTTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS-3UTR CAA 90 bp | TCGATCCCCATCTTTAAATTTGTGAATCCAGGTGAGGAGAGAGGCATGGGAGGTTCTTTAATATTAAGGTaGGTGCAGGCACTTGTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SIPIFKFVNPGEERGMGGSLILR*VQALVS Trigger: CGAAACAAGTGCCTGCACCAACCTTAATATTAAAGA...ACCTCCCATGCCTCTCTCCTCACCTGGATTCACAAATTTAAAGATGGGGATCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021459.14 |
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| CDS CAA 90 bp | TCAGGTTTGCCTTCGTCCTCCTCCAGCTCGGCCAGTGCGAGCTCGTaGCTGGCACGTGTTCGGAGACCATCCAGCTCTTTCCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGLPSSSSSSASASS*LARVRRPSSSFLWA Trigger: GGCCCACAGGAAAGAGCTGGATGGTCTCCGAACACGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAGGAGGACGAAGGCAAACCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS GCA 72 bp | CTTCGTCCTCCTCCAGCTCGGCCAGTGCGAGCTCGTTaGTGGCACGTGTTCGGAGACCATCCAGCTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRPPPARPVRAR*WHVFGDHPALS Trigger: GGAAAGAGCTGGATGGTCTCCGAACACGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAGGAGGACGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS GCA 72 bp | CTCAGGTTTGCCTTCGTCCTCCTCCAGCTCGGCCAGTaGGAGCTCGTTGCTGGCACGTGTTCGGAGACCATC | + |
|
Preference number: 6 (lower is better) Translates to: LRFAFVLLQLGQ*ELVAGTCSETI Trigger: GATGGTCTCCGAACACGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAGGAGGACGAAGGCAAACCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS CCA 72 bp | CGTCCTCCTCCAGCTCGGCCAGTGCGAGCTCGTTGCTaGCACGTGTTCGGAGACCATCCAGCTCTTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RPPPARPVRARC*HVFGDHPALSC Trigger: ACAGGAAAGAGCTGGATGGTCTCCGAACACGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAGGAGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS CAA 72 bp | CCTTCGTCCTCCTCCAGCTCGGCCAGTGCGAGCTCGTaGCTGGCACGTGTTCGGAGACCATCCAGCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSSSSSSASASS*LARVRRPSSSF Trigger: GAAAGAGCTGGATGGTCTCCGAACACGTGCCAGCAACGAGCTCGCACTGGCCGAGCTGGAGGAGGACGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS CCA 72 bp | CTGGCACGTGTTCGGAGACCATCCAGCTCTTTCCTGTaGGCCTGCAGCACCAGCTCCGTCAGACGAGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LARVRRPSSSFL*ACSTSSVRRVK Trigger: CTTCACTCGTCTGACGGAGCTGGTGCTGCAGGCCCACAGGAAAGAGCTGGATGGTCTCCGAACACGTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS GCA 72 bp | CGTGTTCGGAGACCATCCAGCTCTTTCCTGTGGGCCTaGAGCACCAGCTCCGTCAGACGAGTGAAGGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: RVRRPSSSFLWA*STSSVRRVKDS Trigger: AGAGTCCTTCACTCGTCTGACGGAGCTGGTGCTGCAGGCCCACAGGAAAGAGCTGGATGGTCTCCGAACACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 ENSMUST00000154765.8 |
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| CDS GCA 72 bp | AGCAGGTCTTTGAAGAGTTTGCTGGGCCCTCAGGTTTaGCTTCGTCCTCCTCCAGCTCGGCCAGTGCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSLKSLLGPQV*LRPPPARPVRA Trigger: AGCTCGCACTGGCCGAGCTGGAGGAGGACGAAGGCAAACCTGAGGGCCCAGCAAACTCTTCAAAGACCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 |
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| CDS CCA 72 bp | TGCTCTTCATCAGCCTTATTCCCAATTAGGATCTTCTaGACTCCTTCTGGAGCGTACTCATCCACGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: CSSSALFPIRIF*TPSGAYSSTSL Trigger: CAGTGACGTGGATGAGTACGCTCCAGAAGGAGTCCAGAAGATCCTAATTGGGAATAAGGCTGATGAAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021459.14 ENSMUST00000118604.8 ENSMUST00000121716.8 ENSMUST00000122419.8 ENSMUST00000141622.3 ENSMUST00000154765.8 |
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