Pregenerated sensors for RAB12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023460Ensembl transcript IDs: ENSMUST00000070538.12, ENSMUST00000167962.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTACATGGCCCATGTGTGCTCTCACTGTGGCCGTGAGGGAGCTCTaGTTTGGTGCAGAGACACTCCAAACCTTGAGGTGCCGTGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: TTWPMCALTVAVREL*FGAETLQTLRCRVG Trigger: CCCCACACGGCACCTCAAGGTTTGGAGTGTCTCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCATGTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR GCA 90 bp | GTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCATGTGTaGTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTGGTGCAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: VQSPIQEPSHYMAHV*SHCGREGALLWCRD Trigger: GTCTCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR CCA 90 bp | ATGGCCCATGTGTGCTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTaGTGCAGAGACACTCCAAACCTTGAGGTGCCGTGTGGGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: MAHVCSHCGREGALL*CRDTPNLEVPCGES Trigger: GCTTTCCCCACACGGCACCTCAAGGTTTGGAGTGTCTCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR CCA 90 bp | CTCGGGACTAAGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATaGCCCATGTGTGCTCTCACTGTGGCCGTGAGGGAGCTCTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: LGTKSSPLSRNPLTT*PMCALTVAVRELCF Trigger: AAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACTTAGTCCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR GCA 90 bp | GCGATGACGGGGATTGAAGCCAGAGCCTCACGTACGCTGGACAGATaGTCAAATGCTGAGCTGCAATCCCAGCCCTTCCGTTCTTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: AMTGIEARASRTLDR*SNAELQSQPFRSFS Trigger: AGAGAAAGAACGGAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGGCTCTGGCTTCAATCCCCGTCATCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR GCA 90 bp | AAGCCAGAGCCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTaGAATCCCAGCCCTTCCGTTCTTTCTCTATTGAACCTTTTCATT | + |
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Preference number: 1 (lower is better) Translates to: KPEPHVRWTDAQMLS*NPSPSVLSLLNLFI Trigger: AATGAAAAGGTTCAATAGAGAAAGAACGGAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGGCTCTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR TCA 90 bp | TTACCCAGGATTGCATATTTGCATATTTACAAGTTAGTGTATAGCTaGCTTGGGTTACAAAGTGCGAAAGGAAATTGTCACGTGATTGTA | + |
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Preference number: 1 (lower is better) Translates to: LPRIAYLHIYKLVYS*LGLQSAKGNCHVIV Trigger: TACAATCACGTGACAATTTCCTTTCGCACTTTGTAACCCAAGTCAGCTATACACTAACTTGTAAATATGCAAATATGCAATCCTGGGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTGCAATCCCAGCCCTTCGCCGTGAGGGAGCTCTaGTTTGGTGCAGAGACACTC | + |
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Preference number: 2 (lower is better) Translates to: ASRTLDRCSNAELQSQPFAVREL*FGAETL Trigger: GAGTGTCTCTGCACCAAAGCAGAGCTCCCTCACGGC...GAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCGGGACTAAGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCAGGAGCTCTGCTTTGGTaGAGAGACACTCCAAACCTT | + |
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Preference number: 2 (lower is better) Translates to: ASGLSPVPYPGTLSLHGPGALLW*RDTPNL Trigger: AAGGTTTGGAGTGTCTCTGCACCAAAGCAGAGCTCC...TGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACTTAGTCCCGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGCCCATGTGTGCTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTGGTGCAGAACTTGGGTTACAAAGTaGGAAAGGAAATTGTCACGT | + |
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Preference number: 2 (lower is better) Translates to: MAHVCSHCGREGALLWCRTWVTK*ERKLSR Trigger: ACGTGACAATTTCCTTTCGCACTTTGTAACCCAAGT...TCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTGCAATCCCAGCCCTTCCGACCTTACCCAGGATTaGATATTTGCATATTTACAA | + |
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Preference number: 2 (lower is better) Translates to: PHVRWTDAQMLSCNPSPSDLTQD*IFAYLQ Trigger: TTGTAAATATGCAAATATGCAATCCTGGGTAAGGTC...GGAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR GCA 90 bp | GACCATGATGCTTCTCATAGCACAACACTCAGGACACGCCAAGTTATTCAAATAAAACACCCAGGGTTCTaGAGCCTCGGGACTAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: DHDASHSTTLRTRQVIQIKHPGF*SLGTKS Trigger: GGACTTAGTCCCGAGGCTGCAGAACCCTGGGTGTTT...TATTTGAATAACTTGGCGTGTCCTGAGTGTTGTGCTATGAGAAGCATCATGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTCTTCGTATTAGAAGTACTACGCCTCCCAGTGTGCGTACACTAGACACTAAGTTAGTGTATAGCTaGCTTGGGTTACAAAGTGCG | + |
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Preference number: 2 (lower is better) Translates to: PSLRIRSTTPPSVRTLDTKLVYS*LGLQSA Trigger: CGCACTTTGTAACCCAAGTCAGCTATACACTAACTT...AGTGTCTAGTGTACGCACACTGGGAGGCGTAGTACTTCTAATACGAAGACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR CCA 90 bp | GACCATGATGCTTCTCATAGCACAACACTCAGGACACGCCAAGTTATTCAAATAAACCCTCTCACTACATaGCCCATGTGTGCTCTCACT | + |
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Preference number: 2 (lower is better) Translates to: DHDASHSTTLRTRQVIQINPLTT*PMCALT Trigger: AGTGAGAGCACACATGGGCCATGTAGTGAGAGGGTT...TATTTGAATAACTTGGCGTGTCCTGAGTGTTGTGCTATGAGAAGCATCATGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTTCTTTCCTTGCGATGACGGGGATTGAAGCCAGAGCCTCACGTACGCTGGACCTTACCCAGGATTaGATATTTGCATATTTACAA | + |
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Preference number: 2 (lower is better) Translates to: FLSFLAMTGIEARASRTLDLTQD*IFAYLQ Trigger: TTGTAAATATGCAAATATGCAATCCTGGGTAAGGTC...CAGCGTACGTGAGGCTCTGGCTTCAATCCCCGTCATCGCAAGGAAAGAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCATAGCACAACACTCAGGACACGCCAAGTTATTCAAATACATACTTATTTAACTTGGGTTACAAAGTaGGAAAGGAAATTGTCACGT | + |
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Preference number: 2 (lower is better) Translates to: SHSTTLRTRQVIQIHTYLTWVTK*ERKLSR Trigger: ACGTGACAATTTCCTTTCGCACTTTGTAACCCAAGT...TAAATAAGTATGTATTTGAATAACTTGGCGTGTCCTGAGTGTTGTGCTATGAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR GCA 72 bp | TGCTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTGGTaGAGAGACACTCCAAACCTTGAGGTGCCGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: CSHCGREGALLW*RDTPNLEVPCG Trigger: CCCACACGGCACCTCAAGGTTTGGAGTGTCTCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR GCA 72 bp | AAGCAGGTCACAGCCAACGGGAAACACCCAGGGTTCTaGAGCCTCGGGACTAAGTCCAGTCCCCTATCCAGG | + |
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Preference number: 3 (lower is better) Translates to: KQVTANGKHPGF*SLGTKSSPLSR Trigger: CCTGGATAGGGGACTGGACTTAGTCCCGAGGCTGCAGAACCCTGGGTGTTTCCCGTTGGCTGTGACCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR GCA 72 bp | CCTATCCAGGAACCCTCTCACTACATGGCCCATGTGTaGTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: PIQEPSHYMAHV*SHCGREGALLW Trigger: CCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCATGTAGTGAGAGGGTTCCTGGATAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR CCA 72 bp | GTGTGCTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTaGTGCAGAGACACTCCAAACCTTGAGGTGCCGTGT | + |
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Preference number: 3 (lower is better) Translates to: VCSHCGREGALL*CRDTPNLEVPC Trigger: ACACGGCACCTCAAGGTTTGGAGTGTCTCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR CCA 72 bp | AAGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATaGCCCATGTGTGCTCTCACTGTGGCCGTGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KSSPLSRNPLTT*PMCALTVAVRE Trigger: CTCCCTCACGGCCACAGTGAGAGCACACATGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR TCA 72 bp | CAGAGCCTCACGTACGCTGGACAGATGCTCAAATGCTaGGCTGCAATCCCAGCCCTTCCGTTCTTTCTCTAT | + |
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Preference number: 3 (lower is better) Translates to: QSLTYAGQMLKC*AAIPALPFFLY Trigger: ATAGAGAAAGAACGGAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGCCCATGTGTGCTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTGGTGCAGAAAGTGCGAAAGGAAATaGTCACGTGATTGTAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: MAHVCSHCGREGALLWCRKCERK*SRDCSA Trigger: TGCACTACAATCACGTGACAATTTCCTTTCGCACTT...TCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTGCAATCCCAGCCCTTCAAGTGCGAAAGGAAATaGTCACGTGATTGTAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: ASRTLDRCSNAELQSQPFKCERK*SRDCSA Trigger: TGCACTACAATCACGTGACAATTTCCTTTCGCACTT...GAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTCGGGACTAAGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCATTTTGTAGATTTTCGTaGAAACAGCAAGCGAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: ASGLSPVPYPGTLSLHGPFCRFS*KQQAKH Trigger: GTGCTTCGCTTGCTGTTTCAACGAAAATCTACAAAA...TGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACTTAGTCCCGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR TCA 72 bp | GCTTCTTTTTCTTTCTTTCCTTGCGATGACGGGGATTaGAGCCAGAGCCTCACGTACGCTGGACAGATGCTC | + |
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Preference number: 3 (lower is better) Translates to: ASFSFFPCDDGD*SQSLTYAGQML Trigger: GAGCATCTGTCCAGCGTACGTGAGGCTCTGGCTTCAATCCCCGTCATCGCAAGGAAAGAAAGAAAAAGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR GCA 72 bp | CCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTaGAATCCCAGCCCTTCCGTTCTTTCTCTATTGAAC | + |
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Preference number: 3 (lower is better) Translates to: PHVRWTDAQMLS*NPSPSVLSLLN Trigger: GTTCAATAGAGAAAGAACGGAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR CAA 90 bp | AGTACTACGCCTCCCAGTGTGCGTACACTAGACACTGGGGTAATGAGGAAATATCCCAGGATTGCATATTaGCATATTTACAAGTTAGTG | + |
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Preference number: 3 (lower is better) Translates to: STTPPSVRTLDTGVMRKYPRIAY*HIYKLV Trigger: CACTAACTTGTAAATATGCAAATATGCAATCCTGGG...ATATTTCCTCATTACCCCAGTGTCTAGTGTACGCACACTGGGAGGCGTAGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCATAGCACAACACTCAGGACACGCCAAGTTATTCAAATACATACTTATTTAGAGACACTCCAAACCTaGAGGTGCCGTGTGGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: SHSTTLRTRQVIQIHTYLETLQT*RCRVGK Trigger: TTTCCCCACACGGCACCTCAAGGTTTGGAGTGTCTC...TAAATAAGTATGTATTTGAATAACTTGGCGTGTCCTGAGTGTTGTGCTATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | GCCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTGCAATCCCAGCCCTTCCCATCAGGCTGGTCTTaGCCACGCCGCGGGAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: ASRTLDRCSNAELQSQPFPSGWS*PRRGSR Trigger: TCGGCTCCCGCGGCGTGGGCAAGACCAGCCTGATGG...GAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CCA 90 bp | CCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTGCAATCCCAGCCCTTCCGGGAGGAGGCAGCTCTaGTGGGATCTCAGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PHVRWTDAQMLSCNPSPSGRRQL*WDLRLW Trigger: CCAGAGCCTGAGATCCCACCAGAGCTGCCTCCTCCC...GGAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CCA 90 bp | ATGGCCCATGTGTGCTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTGGTGCAGAATCGGACGTGTGGTCTaGGAGGAGGCAGCTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: MAHVCSHCGREGALLWCRIGRVV*EEAALV Trigger: CACCAGAGCTGCCTCCTCCCAGACCACACGTCCGAT...TCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CCA 90 bp | GCCTCGGGACTAAGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCAACAGCATCGGACGTGTaGTCTGGGAGGAGGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ASGLSPVPYPGTLSLHGPTASDV*SGRRQL Trigger: GAGCTGCCTCCTCCCAGACCACACGTCCGATGCTGT...TGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACTTAGTCCCGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR TCA 90 bp | GCCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTGCAATCCCAGCCCTTCAGAACGTGTCGTCGGTaGAGCGCTCCATCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ASRTLDRCSNAELQSQPFRTCRR*SAPSGW Trigger: CCAGCCTGATGGAGCGCTTCACCGACGACACGTTCT...GAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | GCCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTGCAATCCCAGCCCTTCCACCCACGGTGGACTTaGAGGCCTCGCAGAACGTGT | + |
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Preference number: 4 (lower is better) Translates to: ASRTLDRCSNAELQSQPFHPRWT*RPRRTC Trigger: ACACGTTCTGCGAGGCCTGCAAGTCCACCGTGGGTG...GAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | AGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCATGTGTGCTCTCACCGATGATGATGACCTaGAGCTTGAAGTCGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SPVPYPGTLSLHGPCVLSPMMMT*SLKSAG Trigger: GCCGGCCGACTTCAAGCTGCAGGTCATCATCATCGG...TGAGAGCACACATGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CCA 90 bp | CCCAGTCTTCGTATTAGAAGTACTACGCCTCCCAGTGTGCGTACACTAGACACTGGTGCAGCGCGGCGCTaGGATCCATGCACGCATACG | + |
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Preference number: 4 (lower is better) Translates to: PSLRIRSTTPPSVRTLDTGAARR*DPCTHT Trigger: CGTATGCGTGCATGGATCCCAGCGCCGCGCTGCACC...AGTGTCTAGTGTACGCACACTGGGAGGCGTAGTACTTCTAATACGAAGACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070538.12 |
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| CDS-3UTR CCA 90 bp | AGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCATGTGTGCTCTCAAGTCAACACCCACGGTaGACTTGCAGGCCTCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SPVPYPGTLSLHGPCVLSSQHPR*TCRPRR Trigger: TCTGCGAGGCCTGCAAGTCCACCGTGGGTGTTGACT...TGAGAGCACACATGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR TCA 90 bp | ATGGCCCATGTGTGCTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTGGTGCAGAAGATCTCGTCCACATTaGAATTGTCCTTGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: MAHVCSHCGREGALLWCRRSRPH*NCPWHW Trigger: CCAGTGCCAAGGACAATTTCAATGTGGACGAGATCT...TCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTTCTTTCCTTGCGATGACGGGGATTGAAGCCAGAGCCTCACGTACGCTGCCGATGATGATGACCTaGAGCTTGAAGTCGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: FLSFLAMTGIEARASRTLPMMMT*SLKSAG Trigger: GCCGGCCGACTTCAAGCTGCAGGTCATCATCATCGG...CAGCGTACGTGAGGCTCTGGCTTCAATCCCCGTCATCGCAAGGAAAGAAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | ATGGCCCATGTGTGCTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTGGTGCAGACCCGGTTATCTGCTGTaGAAACTTTTCTCCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: MAHVCSHCGREGALLWCRPGYLL*KLFSLL Trigger: CAGCAAGGAGAAAAGTTTGCACAGCAGATAACCGGG...TCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CCA 90 bp | TTTCTTTCTTTCCTTGCGATGACGGGGATTGAAGCCAGAGCCTCACGTACGCTGAGTCAACACCCACGGTaGACTTGCAGGCCTCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FLSFLAMTGIEARASRTLSQHPR*TCRPRR Trigger: TCTGCGAGGCCTGCAAGTCCACCGTGGGTGTTGACT...CAGCGTACGTGAGGCTCTGGCTTCAATCCCCGTCATCGCAAGGAAAGAAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CCA 90 bp | AGTACTACGCCTCCCAGTGTGCGTACACTAGACACTGGGGTAATGAGGAAATATGGGAGGAGGCAGCTCTaGTGGGATCTCAGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: STTPPSVRTLDTGVMRKYGRRQL*WDLRLW Trigger: CCAGAGCCTGAGATCCCACCAGAGCTGCCTCCTCCC...ATATTTCCTCATTACCCCAGTGTCTAGTGTACGCACACTGGGAGGCGTAGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR TCA 90 bp | TGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCCCCTTCTAGGAATCGCTTGAGAACGTGTCGTCGGTaGAGCGCTCCATCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: CHVIVVQNRTFPPSRNRLRTCRR*SAPSGW Trigger: CCAGCCTGATGGAGCGCTTCACCGACGACACGTTCT...CAAGCGATTCCTAGAAGGGGGAAACGTTCTGTTCTGCACTACAATCACGTGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR TCA 90 bp | CCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTGCAATCCCAGCCCTTCCTTCTCCTTGCTGCCTTaGGATTTCTCTGTCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: PHVRWTDAQMLSCNPSPSFSLLP*DFSVCL Trigger: GAGACAGACAGAGAAATCTCAAGGCAGCAAGGAGAA...GGAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | ACAAAGTGCGAAAGGAAATTGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCCCATCAGGCTGGTCTTaGCCACGCCGCGGGAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: TKCERKLSRDCSAEQNVSPSGWS*PRRGSR Trigger: TCGGCTCCCGCGGCGTGGGCAAGACCAGCCTGATGG...GGAAACGTTCTGTTCTGCACTACAATCACGTGACAATTTCCTTTCGCACTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CCA 90 bp | TGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCCCCTTCTAGGAATCGCTTGACAGCATCGGACGTGTaGTCTGGGAGGAGGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: CHVIVVQNRTFPPSRNRLTASDV*SGRRQL Trigger: GAGCTGCCTCCTCCCAGACCACACGTCCGATGCTGT...CAAGCGATTCCTAGAAGGGGGAAACGTTCTGTTCTGCACTACAATCACGTGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR TCA 90 bp | AGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCATGTGTGCTCTCAAGATCTCGTCCACATTaGAATTGTCCTTGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: SPVPYPGTLSLHGPCVLSRSRPH*NCPWHW Trigger: CCAGTGCCAAGGACAATTTCAATGTGGACGAGATCT...TGAGAGCACACATGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | CCTCACGTACGCTGGACAGATGCTCAAATGCTGAGCTGCAATCCCAGCCCTTCCAACTTTTCTCCTTGCTaGCTTGAGATTTCTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: PHVRWTDAQMLSCNPSPSNFSPC*LEISLS Trigger: AGACAGAGAAATCTCAAGGCAGCAAGGAGAAAAGTT...GGAAGGGCTGGGATTGCAGCTCAGCATTTGAGCATCTGTCCAGCGTACGTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTTCTTTCCTTGCGATGACGGGGATTGAAGCCAGAGCCTCACGTACGCTGCGCATCCCGGTTATCTaGTGTGCAAACTTTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FLSFLAMTGIEARASRTLRIPVI*CANFSP Trigger: AGGAGAAAAGTTTGCACAGCAGATAACCGGGATGCG...CAGCGTACGTGAGGCTCTGGCTTCAATCCCCGTCATCGCAAGGAAAGAAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CCA 90 bp | ACAAAGTGCGAAAGGAAATTGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCATCGGACGTGTGGTCTaGGAGGAGGCAGCTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: TKCERKLSRDCSAEQNVSIGRVV*EEAALV Trigger: CACCAGAGCTGCCTCCTCCCAGACCACACGTCCGAT...GGAAACGTTCTGTTCTGCACTACAATCACGTGACAATTTCCTTTCGCACTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR TCA 90 bp | AGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCATGTGTGCTCTCAACTTCTGTAATAGGCTaGGGTAATGCTGTTAAATCG | + |
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Preference number: 4 (lower is better) Translates to: SPVPYPGTLSLHGPCVLSTSVIG*GNAVKS Trigger: CGATTTAACAGCATTACCTCAGCCTATTACAGAAGT...TGAGAGCACACATGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | AGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCATGTGTGCTCTCAAACTTTTCTCCTTGCTaGCTTGAGATTTCTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SPVPYPGTLSLHGPCVLSNFSPC*LEISLS Trigger: AGACAGAGAAATCTCAAGGCAGCAAGGAGAAAAGTT...TGAGAGCACACATGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CCA 90 bp | TGCGAAAGGAAATTGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCCCCTTCAATTGTCCTTGGCACTaGCTTCGCAGAAGCGCATCC | + |
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Preference number: 4 (lower is better) Translates to: CERKLSRDCSAEQNVSPFNCPWH*LRRSAS Trigger: GGATGCGCTTCTGCGAAGCCAGTGCCAAGGACAATT...GAAGGGGGAAACGTTCTGTTCTGCACTACAATCACGTGACAATTTCCTTTCGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR TCA 90 bp | CCCAGTCTTCGTATTAGAAGTACTACGCCTCCCAGTGTGCGTACACTAGACACTTGTCATATACGAGTATaGTCCCCTTGGCACTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PSLRIRSTTPPSVRTLDTCHIRV*SPWHFC Trigger: ACAGAAGTGCCAAGGGGATCATACTCGTATATGACA...AGTGTCTAGTGTACGCACACTGGGAGGCGTAGTACTTCTAATACGAAGACTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | CCCAGTCTTCGTATTAGAAGTACTACGCCTCCCAGTGTGCGTACACTAGACACTGCAAACTTTTCTCCTTaGTGCCTTGAGATTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PSLRIRSTTPPSVRTLDTANFSP*CLEISL Trigger: CAGAGAAATCTCAAGGCAGCAAGGAGAAAAGTTTGC...AGTGTCTAGTGTACGCACACTGGGAGGCGTAGTACTTCTAATACGAAGACTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | TGCGAAAGGAAATTGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCCCCTTCCGCATCCCGGTTATCTaGTGTGCAAACTTTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CERKLSRDCSAEQNVSPFRIPVI*CANFSP Trigger: AGGAGAAAAGTTTGCACAGCAGATAACCGGGATGCG...GAAGGGGGAAACGTTCTGTTCTGCACTACAATCACGTGACAATTTCCTTTCGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR TCA 90 bp | TGCGAAAGGAAATTGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCCCCTTCTGTCATATACGAGTATaGTCCCCTTGGCACTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: CERKLSRDCSAEQNVSPFCHIRV*SPWHFC Trigger: ACAGAAGTGCCAAGGGGATCATACTCGTATATGACA...GAAGGGGGAAACGTTCTGTTCTGCACTACAATCACGTGACAATTTCCTTTCGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR GCA 90 bp | TGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCCCCTTCTAGGAATCGCTTGGCAAACTTTTCTCCTTaGTGCCTTGAGATTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: CHVIVVQNRTFPPSRNRLANFSP*CLEISL Trigger: CAGAGAAATCTCAAGGCAGCAAGGAGAAAAGTTTGC...CAAGCGATTCCTAGAAGGGGGAAACGTTCTGTTCTGCACTACAATCACGTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CCA 90 bp | TGCGAAAGGAAATTGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCCCCTTCCATCTTCATCCACTTTaGCAAGTCATCGAACGTCTC | + |
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Preference number: 4 (lower is better) Translates to: CERKLSRDCSAEQNVSPFHLHPL*QVIERL Trigger: GAGACGTTCGATGACTTGCCAAAGTGGATGAAGATG...GAAGGGGGAAACGTTCTGTTCTGCACTACAATCACGTGACAATTTCCTTTCGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGTGCGAAAGGAAATTGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCTTCTCCTTGCTGCCTTaGGATTTCTCTGTCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TKCERKLSRDCSAEQNVSFSLLP*DFSVCL Trigger: GAGACAGACAGAGAAATCTCAAGGCAGCAAGGAGAA...GGAAACGTTCTGTTCTGCACTACAATCACGTGACAATTTCCTTTCGCACTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | AGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCATGTGTGCTCTCATCCATCAGGCTGGTCTaGCCCACGCCGCGGGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: SPVPYPGTLSLHGPCVLSSIRLV*PTPREP Trigger: CGGCTCCCGCGGCGTGGGCAAGACCAGCCTGATGGA...TGAGAGCACACATGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | CCCAGTCTTCGTATTAGAAGTACTACGCCTCCCAGTGTGCGTACACTAGACACTATGATGACCTGCAGCTaGAAGTCGGCCGGCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: PSLRIRSTTPPSVRTLDTMMTCS*KSAGLG Trigger: CCCCAGGCCGGCCGACTTCAAGCTGCAGGTCATCAT...AGTGTCTAGTGTACGCACACTGGGAGGCGTAGTACTTCTAATACGAAGACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | TGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCCCCTTCTAGGAATCGCTTGATGATGACCTGCAGCTaGAAGTCGGCCGGCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: CHVIVVQNRTFPPSRNRLMMTCS*KSAGLG Trigger: CCCCAGGCCGGCCGACTTCAAGCTGCAGGTCATCAT...CAAGCGATTCCTAGAAGGGGGAAACGTTCTGTTCTGCACTACAATCACGTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGTGCGAAAGGAAATTGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCTCCATCAGGCTGGTCTaGCCCACGCCGCGGGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: TKCERKLSRDCSAEQNVSSIRLV*PTPREP Trigger: CGGCTCCCGCGGCGTGGGCAAGACCAGCCTGATGGA...GGAAACGTTCTGTTCTGCACTACAATCACGTGACAATTTCCTTTCGCACTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | GCCTCGGGACTAAGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCAACATTGAAATTGTCCTaGGCACTGGCTTCGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: ASGLSPVPYPGTLSLHGPTLKLS*ALASQK Trigger: CTTCTGCGAAGCCAGTGCCAAGGACAATTTCAATGT...TGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACTTAGTCCCGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | TGCGAAAGGAAATTGTCACGTGATTGTAGTGCAGAACAGAACGTTTCCCCCTTCACACCCACGGTGGACTaGCAGGCCTCGCAGAACGTG | + |
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Preference number: 5 (lower is better) Translates to: CERKLSRDCSAEQNVSPFTPTVD*QASQNV Trigger: CACGTTCTGCGAGGCCTGCAAGTCCACCGTGGGTGT...GAAGGGGGAAACGTTCTGTTCTGCACTACAATCACGTGACAATTTCCTTTCGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | GCCTCGGGACTAAGTCCAGTCCCCTATCCAGGAACCCTCTCACTACATGGCCCATCATCTTCATCCACTTaGGCAAGTCATCGAACGTCT | + |
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Preference number: 5 (lower is better) Translates to: ASGLSPVPYPGTLSLHGPSSSST*ASHRTS Trigger: AGACGTTCGATGACTTGCCAAAGTGGATGAAGATGA...TGGGCCATGTAGTGAGAGGGTTCCTGGATAGGGGACTGGACTTAGTCCCGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | ATGGCCCATGTGTGCTCTCACTGTGGCCGTGAGGGAGCTCTGCTTTGGTGCAGATTTCTCCTTGCTGCCTaGAGATTTCTCTGTCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: MAHVCSHCGREGALLWCRFLLAA*RFLCLS Trigger: AGACAGACAGAGAAATCTCAAGGCAGCAAGGAGAAA...TCTGCACCAAAGCAGAGCTCCCTCACGGCCACAGTGAGAGCACACATGGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTTCTTTCCTTGCGATGACGGGGATTGAAGCCAGAGCCTCACGTACGCTGAAGATCTCGTCCACATaGAAATTGTCCTTGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: FLSFLAMTGIEARASRTLKISST*KLSLAL Trigger: CAGTGCCAAGGACAATTTCAATGTGGACGAGATCTT...CAGCGTACGTGAGGCTCTGGCTTCAATCCCCGTCATCGCAAGGAAAGAAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | CCCAGTCTTCGTATTAGAAGTACTACGCCTCCCAGTGTGCGTACACTAGACACTAAGATCTCGTCCACATaGAAATTGTCCTTGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PSLRIRSTTPPSVRTLDTKISST*KLSLAL Trigger: CAGTGCCAAGGACAATTTCAATGTGGACGAGATCTT...AGTGTCTAGTGTACGCACACTGGGAGGCGTAGTACTTCTAATACGAAGACTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | AGTACTACGCCTCCCAGTGTGCGTACACTAGACACTGGGGTAATGAGGAAATATTCATCTTCATCCACTTaGGCAAGTCATCGAACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: STTPPSVRTLDTGVMRKYSSSST*ASHRTS Trigger: AGACGTTCGATGACTTGCCAAAGTGGATGAAGATGA...ATATTTCCTCATTACCCCAGTGTCTAGTGTACGCACACTGGGAGGCGTAGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS TCA 90 bp | TTTTCAGAATATCATCAACAAGTTTCAGAAAGATCTCGTCCACATTaGAATTGTCCTTGGCACTGGCTTCGCAGAAGCGCATCCCGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: FSEYHQQVSERSRPH*NCPWHWLRRSASRL Trigger: TAACCGGGATGCGCTTCTGCGAAGCCAGTGCCAAGGACAATTTCAATGTGGACGAGATCTTTCTGAAACTTGTTGATGATATTCTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS-3UTR CAA 90 bp | GACCATGATGCTTCTCATAGCACAACACTCAGGACACGCCAAGTTATTCAAATATTTCTCCTTGCTGCCTaGAGATTTCTCTGTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DHDASHSTTLRTRQVIQIFLLAA*RFLCLS Trigger: AGACAGACAGAGAAATCTCAAGGCAGCAAGGAGAAA...TATTTGAATAACTTGGCGTGTCCTGAGTGTTGTGCTATGAGAAGCATCATGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS CAA 72 bp | ACAGTCTTGATTTTAAAGTCAACACCCACGGTGGACTaGCAGGCCTCGCAGAACGTGTCGTCGGTGAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TVLILKSTPTVD*QASQNVSSVKR Trigger: GCGCTTCACCGACGACACGTTCTGCGAGGCCTGCAAGTCCACCGTGGGTGTTGACTTTAAAATCAAGACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS GCA 72 bp | TTGGCACTGGCTTCGCAGAAGCGCATCCCGGTTATCTaGTGTGCAAACTTTTCTCCTTGCTGCCTTGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: LALASQKRIPVI*CANFSPCCLEI Trigger: AATCTCAAGGCAGCAAGGAGAAAAGTTTGCACAGCAGATAACCGGGATGCGCTTCTGCGAAGCCAGTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS TCA 72 bp | CAGCTTATTTCCAACCAGGAGGAGCTCGGCGTCTTCTaGAGCATACTTGTCAATCATCTTCATCCACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QLISNQEELGVF*SILVNHLHPLW Trigger: CCAAAGTGGATGAAGATGATTGACAAGTATGCTTCAGAAGACGCCGAGCTCCTCCTGGTTGGAAATAAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS TCA 72 bp | GGTTATCTGCTGTGCAAACTTTTCTCCTTGCTGCCTTaGGATTTCTCTGTCTGTCTCACAGTCCAGCTTATT | + |
|
Preference number: 6 (lower is better) Translates to: GYLLCKLFSLLP*DFSVCLTVQLI Trigger: AATAAGCTGGACTGTGAGACAGACAGAGAAATCTCAAGGCAGCAAGGAGAAAAGTTTGCACAGCAGATAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS GCA 72 bp | CTGGTGGGATCTCAGGCTCTGGTTGTAGAGAAAGGATaGTATTGGATAACTCGTTTCTCAAAACATCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVGSQALVVEKG*YWITRFSKHQE Trigger: CTCTTGATGTTTTGAGAAACGAGTTATCCAATAGCATCCTTTCTCTACAACCAGAGCCTGAGATCCCACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS CAA 72 bp | GGGATCTCAGGCTCTGGTTGTAGAGAAAGGATGCTATaGGATAACTCGTTTCTCAAAACATCAAGAGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: GISGSGCRERML*DNSFLKTSRGI Trigger: GATGCCTCTTGATGTTTTGAGAAACGAGTTATCCAATAGCATCCTTTCTCTACAACCAGAGCCTGAGATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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| CDS CCA 72 bp | GGATCTCAGGCTCTGGTTGTAGAGAAAGGATGCTATTaGATAACTCGTTTCTCAAAACATCAAGAGGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GSQALVVEKGCY*ITRFSKHQEAS Trigger: AGATGCCTCTTGATGTTTTGAGAAACGAGTTATCCAATAGCATCCTTTCTCTACAACCAGAGCCTGAGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070538.12 ENSMUST00000167962.2 |
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