Pregenerated sensors for RAB11FIP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040022

Ensembl transcript IDs: ENSMUST00000051996.13, ENSMUST00000170819.2, ENSMUST00000171986.8

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	AGATCACATGACTGGGCATGCTCACACTTCACCCACACGCACCAGTaGCACCTACTGCACCTAGAGACAGACGATGGCACAGACAGCAAG	+
Preference number: 1 (lower is better) Translates to: RSHDWACSHFTHTHQ*HLLHLETDDGTDSK Trigger: CTTGCTGTCTGTGCCATCGTCTGTCTCTAGGTGCAGTAGGTGTCACTGGTGCGTGTGGGTGAAGTGTGAGCATGCCCAGTCATGTGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR TCA 90 bp	ATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGTaGGATGGGAAAGGGGGACATGAAGAAGCAGGTTTGTCACTAATG	+
Preference number: 1 (lower is better) Translates to: ISTHIGAGSRMQEEW*DGKGGHEEAGLSLM Trigger: CATTAGTGACAAACCTGCTTCTTCATGTCCCCCTTTCCCATCTCACCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR GCA 90 bp	CTTTCAGTATGTGCTGACAGACCCTCTCCAATAGCACCACGAGCTTaGAGTGCAGTCCTTCCCTCTGAGAAGAGATCACATGACTGGGCA	+
Preference number: 1 (lower is better) Translates to: LSVCADRPSPIAPRA*SAVLPSEKRSHDWA Trigger: TGCCCAGTCATGTGATCTCTTCTCAGAGGGAAGGACTGCACTGCAAGCTCGTGGTGCTATTGGAGAGGGTCTGTCAGCACATACTGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR CCA 90 bp	AGTTCAGAGAATCAGGAGTGGGTTGAAGTAGCTTCTCCACAGAGGTaGGGTGGCCCGGGTGACAAGTGGTCCTGGGTGTATACTGTAAAA	+
Preference number: 1 (lower is better) Translates to: SSENQEWVEVASPQR*GGPGDKWSWVYTVK Trigger: TTTTACAGTATACACCCAGGACCACTTGTCACCCGGGCCACCCCACCTCTGTGGAGAAGCTACTTCAACCCACTCCTGATTCTCTGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR CCA 90 bp	GAATGTAGTGAATCCCTTCACAATCAGAGTTCAGAGAATCAGGAGTaGGTTGAAGTAGCTTCTCCACAGAGGTGGGGTGGCCCGGGTGAC	+
Preference number: 1 (lower is better) Translates to: ECSESLHNQSSENQE*VEVASPQRWGGPGD Trigger: GTCACCCGGGCCACCCCACCTCTGTGGAGAAGCTACTTCAACCCACTCCTGATTCTCTGAACTCTGATTGTGAAGGGATTCACTACATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR GCA 90 bp	TTAATGATGAAATTGAAACCAAGCCCAACCTTCATTCCTGGAACTTaGTGTTGCCTTTGGTTATCAGGCAACAGACAATCACCCCACCCC	+
Preference number: 1 (lower is better) Translates to: LMMKLKPSPTFIPGT*CCLWLSGNRQSPHP Trigger: GGGGTGGGGTGATTGTCTGTTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGGAATGAAGGTTGGGCTTGGTTTCAATTTCATCATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CCA 90 bp	GTTGGTAGAGACCTGCTCTCAACACCCACGGTTGCAATGAGTCTTTaGTTCAGGGCTCAAAGGCAACCATCTGTTCTATTAATGATGAAA	+
Preference number: 1 (lower is better) Translates to: VGRDLLSTPTVAMSL*FRAQRQPSVLLMMK Trigger: TTTCATCATTAATAGAACAGATGGTTGCCTTTGAGCCCTGAACCAAAGACTCATTGCAACCGTGGGTGTTGAGAGCAGGTCTCTACCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR TCA 90 bp	GAGAATCCAACAATAGTATCGATTCTGCTTTATGGAATCTATTCCTaGGGAATAACTCATGGGCTGCTGAAGATAGTTCCAGGCCTATGG	+
Preference number: 1 (lower is better) Translates to: ENPTIVSILLYGIYS*GITHGLLKIVPGLW Trigger: CCATAGGCCTGGAACTATCTTCAGCAGCCCATGAGTTATTCCTCAGGAATAGATTCCATAAAGCAGAATCGATACTATTGTTGGATTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	ATGACACTTGAAGTCCCAGAGGCAGGGCGGTGTGGCAACACTGTCAAGCTGAGCCCTGAGGGGAGGAGGTaGAGCTTGACTGTGCCGTCT	+
Preference number: 2 (lower is better) Translates to: MTLEVPEAGRCGNTVKLSPEGRR*SLTVPS Trigger: AGACGGCACAGTCAAGCTTCACCTCCTCCCCTCAGG...GCTCAGCTTGACAGTGTTGCCACACCGCCCTGCCTCTGGGACTTCAAGTGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	CAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTGGGTTACAGTGGGGTGGCCCGGGTaGCAAGTGGTCCTGGGTGTA	+
Preference number: 2 (lower is better) Translates to: QNRAAKGNASNTYHEWVTVGWPG*QVVLGV Trigger: TACACCCAGGACCACTTGTCACCCGGGCCACCCCAC...TGTAACCCACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	TGTGTGACATCAATCCTCAAGGGTAGATGTGGGCTGCCTCATGCTGTATGTTGGGACAACTGTTCCCAATaGCTGAGGGGAGGAGGTGAA	+
Preference number: 2 (lower is better) Translates to: CVTSILKGRCGLPHAVCWDNCSQ*LRGGGE Trigger: TTCACCTCCTCCCCTCAGGCATTGGGAACAGTTGTC...CCAACATACAGCATGAGGCAGCCCACATCTACCCTTGAGGATTGATGTCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	TCAGAGAATCAGGAGTGGGTTGAAGTAGCTTCTCCACAGAGGTGGGGTGGCCCGGAGATCATCAATTTTTaGGACAGTGGTTGGGAACAA	+
Preference number: 2 (lower is better) Translates to: SENQEWVEVASPQRWGGPEIINF*DSGWEQ Trigger: TTGTTCCCAACCACTGTCCCAAAAATTGATGATCTC...CGGGCCACCCCACCTCTGTGGAGAAGCTACTTCAACCCACTCCTGATTCTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGGTTGCAATGAGTCTTTaGTTCAGGGCTCAAAGGCAA	+
Preference number: 2 (lower is better) Translates to: LLRISTHIGAGSRMQEEWVAMSL*FRAQRQ Trigger: TTGCCTTTGAGCCCTGAACCAAAGACTCATTGCAAC...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	GGTTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCGGAGGAGGGCAAAACTaGGGTCAATGCAGAACAGAG	+
Preference number: 2 (lower is better) Translates to: GSTWKIKQVCLWPSFYSAGGGQN*GQCRTE Trigger: CTCTGTTCTGCATTGACCCCAGTTTTGCCCTCCTCC...GGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	TGTGTGACATCAATCCTCAAGGGTAGATGTGGGCTGCCTCATGCTGTATGTTGGCCTGGAACTTGCTGTTaGCTTTGGTTATCAGGCAAC	+
Preference number: 2 (lower is better) Translates to: CVTSILKGRCGLPHAVCWPGTCC*LWLSGN Trigger: GTTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGG...CCAACATACAGCATGAGGCAGCCCACATCTACCCTTGAGGATTGATGTCACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	GGTTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCCTGGAACTTGCTGTTaGCTTTGGTTATCAGGCAAC	+
Preference number: 2 (lower is better) Translates to: GSTWKIKQVCLWPSFYSAPGTCC*LWLSGN Trigger: GTTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGG...GGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGATGGAGGCAAAACTGTaGCTTATGACTTACTTCTCA	+
Preference number: 2 (lower is better) Translates to: LLRISTHIGAGSRMQEEWMEAKL*LMTYFS Trigger: TGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCAT...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	TACAGTGCCCAGCTCACACATGTACTTAGACACTGCCACATGCTATGTTCCCTGAGCTCAAGTCTCTACTaGACTGAGACTCTAGAAAGG	+
Preference number: 2 (lower is better) Translates to: YSAQLTHVLRHCHMLCSLSSSLY*TETLER Trigger: CCTTTCTAGAGTCTCAGTCCAGTAGAGACTTGAGCT...CAGGGAACATAGCATGTGGCAGTGTCTAAGTACATGTGTGAGCTGGGCACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	GGTTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCAAGCAAGTGTGTCTCTaGCCTTCTTTCTACAGTGCC	+
Preference number: 2 (lower is better) Translates to: GSTWKIKQVCLWPSFYSAKQVCL*PSFYSA Trigger: GGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTT...GGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	GGTCAATGCAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTCTCAACACCCACGGTTaGAATGAGTCTTTGGTTCAG	+
Preference number: 2 (lower is better) Translates to: GQCRTEQQKAMLPTLTMSLNTHG*NESLVQ Trigger: CTGAACCAAAGACTCATTGCAACCGTGGGTGTTGAG...ACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTGCATTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGTACCAAGATCTCATATaGGAAAACCAAGTCTACCTT	+
Preference number: 2 (lower is better) Translates to: LLRISTHIGAGSRMQEEWYQDLI*ENQVYL Trigger: AAGGTAGACTTGGTTTTCCCATATGAGATCTTGGTA...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	ACAAATTCTAATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGGCTTCTCCACAGAGGTaGGGTGGCCCGGGTGACAAG	+
Preference number: 2 (lower is better) Translates to: TNSNGGKTVPYDLLLIKRASPQR*GGPGDK Trigger: CTTGTCACCCGGGCCACCCCACCTCTGTGGAGAAGC...CCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATTAGAATTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCAAAGTCTCTACTGGACTaGGACTCTAGAAAGGACACA	+
Preference number: 2 (lower is better) Translates to: FHLEDKASVSLAFFLQCPKSLLD*DSRKDT Trigger: TGTGTCCTTTCTAGAGTCTCAGTCCAGTAGAGACTT...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGATACATGGATTTGGGTaGTTTAAAAAGTTGTGGAGT	+
Preference number: 2 (lower is better) Translates to: LLRISTHIGAGSRMQEEWIHGFG*FKKLWS Trigger: ACTCCACAACTTTTTAAAGCACCCAAATCCATGTAT...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	CAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTGGGTTACAGCTGTTGAATCCACGTaGACAAATTCTAATGGAGGC	+
Preference number: 2 (lower is better) Translates to: QNRAAKGNASNTYHEWVTAVEST*TNSNGG Trigger: GCCTCCATTAGAATTTGTGCACGTGGATTCAACAGC...TGTAACCCACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	GGTCAATGCAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTGCTGTTGAATCCACGTaGACAAATTCTAATGGAGGC	+
Preference number: 2 (lower is better) Translates to: GQCRTEQQKAMLPTLTMSAVEST*TNSNGG Trigger: GCCTCCATTAGAATTTGTGCACGTGGATTCAACAGC...ACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTGCATTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CAA 90 bp	ATTAATGATGAAATTGAAACCAAGCCCAACCTTCATTCCTGGAACTaGCTGTTGCCTTTGGTTATCAGGCAACAGACAATCACCCCACCC	+
Preference number: 2 (lower is better) Translates to: INDEIETKPNLHSWN*LLPLVIRQQTITPP Trigger: GGGTGGGGTGATTGTCTGTTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGGAATGAAGGTTGGGCTTGGTTTCAATTTCATCATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	GCCAGAGAACTGCTCAGTCATCAAGGCATGGCTCATTTTCAGTTTAAGAGTTTACAGGAGAACACTGGCTaGAGAAATCCATGCTTCTAC	+
Preference number: 2 (lower is better) Translates to: ARELLSHQGMAHFQFKSLQENTG*RNPCFY Trigger: GTAGAAGCATGGATTTCTTCAGCCAGTGTTCTCCTG...TAAACTCTTAAACTGAAAATGAGCCATGCCTTGATGACTGAGCAGTTCTCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	GAAACTCTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCCACCCACGGTTGCAATaGGTCTTTGGTTCAGGGCTC	+
Preference number: 2 (lower is better) Translates to: ETLTTRTQHFPECKCRLFHPRLQ*VFGSGL Trigger: GAGCCCTGAACCAAAGACTCATTGCAACCGTGGGTG...GAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAGAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	GGTTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCTTAGATCTGAAAGGTTaGAATACCAGCAGAAGACCT	+
Preference number: 2 (lower is better) Translates to: GSTWKIKQVCLWPSFYSALDLKG*NTSRRP Trigger: AGGTCTTCTGCTGGTATTTCAACCTTTCAGATCTAA...GGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCAATAATACTACATTCATaGGAGGAGGGCAAAACTGGG	+
Preference number: 2 (lower is better) Translates to: FHLEDKASVSLAFFLQCPIILHS*EEGKTG Trigger: CCCAGTTTTGCCCTCCTCCCATGAATGTAGTATTAT...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CAA 90 bp	TGGTTCAGGGCTCAAAGGCAACCATCTGTTCTATTAATGATGAAATaGAAACCAAGCCCAACCTTCATTCCTGGAACTTGCTGTTGCCTT	+
Preference number: 2 (lower is better) Translates to: WFRAQRQPSVLLMMK*KPSPTFIPGTCCCL Trigger: AAGGCAACAGCAAGTTCCAGGAATGAAGGTTGGGCTTGGTTTCAATTTCATCATTAATAGAACAGATGGTTGCCTTTGAGCCCTGAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCATTAGATCTGAAAGGTTaGAATACCAGCAGAAGACCT	+
Preference number: 2 (lower is better) Translates to: FHLEDKASVSLAFFLQCPLDLKG*NTSRRP Trigger: AGGTCTTCTGCTGGTATTTCAACCTTTCAGATCTAA...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	ACAAATTCTAATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGGGAGGAGGTGAAGCTTaGCTGTGCCGTCTTTTCCAG	+
Preference number: 2 (lower is better) Translates to: TNSNGGKTVPYDLLLIKRGGGEA*LCRLFQ Trigger: CTGGAAAAGACGGCACAGTCAAGCTTCACCTCCTCC...CCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATTAGAATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	CAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTGGGTTACACTACAGACTGACTACTaGGAATCCAACAATAGTATC	+
Preference number: 2 (lower is better) Translates to: QNRAAKGNASNTYHEWVTLQTDY*ESNNSI Trigger: GATACTATTGTTGGATTCTCAGTAGTCAGTCTGTAG...TGTAACCCACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	GTTGTCTTTGCTCAGGATACACAGCAGAATAAACCACACTACCCTATCTCCTGCCAATTTTTGGGACAGTaGTTGGGAACAAAGTTAGAA	+
Preference number: 2 (lower is better) Translates to: VVFAQDTQQNKPHYPISCQFLGQ*LGTKLE Trigger: TTCTAACTTTGTTCCCAACCACTGTCCCAAAAATTG...GCAGGAGATAGGGTAGTGTGGTTTATTCTGCTGTGTATCCTGAGCAAAGACAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCCCCAACCTTCATTCCTaGAACTTGCTGTTGCCTTTG	+
Preference number: 2 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGPNLHS*NLLLPL Trigger: CAAAGGCAACAGCAAGTTCCAGGAATGAAGGTTGGG...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCATACCAAGATCTCATATaGGAAAACCAAGTCTACCTT	+
Preference number: 2 (lower is better) Translates to: FHLEDKASVSLAFFLQCPYQDLI*ENQVYL Trigger: AAGGTAGACTTGGTTTTCCCATATGAGATCTTGGTA...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	GGTTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCAACACTTACCATGAGTaGGTTACATGGTATCTTATA	+
Preference number: 2 (lower is better) Translates to: GSTWKIKQVCLWPSFYSANTYHE*VTWYLI Trigger: TATAAGATACCATGTAACCCACTCATGGTAAGTGTT...GGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	TTAGATGAGATTTATGGGAAACTTATTCTGAGGACAAAAGCAACAGACAGCTCACAGGAGAACACTGGCTaGAGAAATCCATGCTTCTAC	+
Preference number: 2 (lower is better) Translates to: LDEIYGKLILRTKATDSSQENTG*RNPCFY Trigger: GTAGAAGCATGGATTTCTTCAGCCAGTGTTCTCCTG...TGAGCTGTCTGTTGCTTTTGTCCTCAGAATAAGTTTCCCATAAATCTCATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	CTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCATTTGTGAATCAGGAGTGGGTTaGAGTAGCTTCTCCACAGAG	+
Preference number: 2 (lower is better) Translates to: LTTRTQHFPECKCRLFICESGVG*SSFSTE Trigger: CTCTGTGGAGAAGCTACTTCAACCCACTCCTGATTC...ACAAATGAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	TTAGATGAGATTTATGGGAAACTTATTCTGAGGACAAAAGCAACAGACAGCTCACTCAACACCCACGGTTaGAATGAGTCTTTGGTTCAG	+
Preference number: 2 (lower is better) Translates to: LDEIYGKLILRTKATDSSLNTHG*NESLVQ Trigger: CTGAACCAAAGACTCATTGCAACCGTGGGTGTTGAG...TGAGCTGTCTGTTGCTTTTGTCCTCAGAATAAGTTTCCCATAAATCTCATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCAATACATGGATTTGGGTaGTTTAAAAAGTTGTGGAGT	+
Preference number: 2 (lower is better) Translates to: FHLEDKASVSLAFFLQCPIHGFG*FKKLWS Trigger: ACTCCACAACTTTTTAAAGCACCCAAATCCATGTAT...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	CAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTGGGTTACATTTCCAGAGTGTAAATaGAGACTTTTCATTTGTCTC	+
Preference number: 2 (lower is better) Translates to: QNRAAKGNASNTYHEWVTFPECK*RLFICL Trigger: GAGACAAATGAAAAGTCTGCATTTACACTCTGGAAA...TGTAACCCACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	TTCCTTGAAAAGAGACTTGAGATCATCAATTTTTGGGACAGTGGTTGGGAACAAGTTGCAATGAGTCTTTaGTTCAGGGCTCAAAGGCAA	+
Preference number: 2 (lower is better) Translates to: FLEKRLEIINFWDSGWEQVAMSL*FRAQRQ Trigger: TTGCCTTTGAGCCCTGAACCAAAGACTCATTGCAAC...TTGTTCCCAACCACTGTCCCAAAAATTGATGATCTCAAGTCTCTTTTCAAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	TTCCTTGAAAAGAGACTTGAGATCATCAATTTTTGGGACAGTGGTTGGGAACAATATGGAATCTATTCCTaGGGAATAACTCATGGGCTG	+
Preference number: 2 (lower is better) Translates to: FLEKRLEIINFWDSGWEQYGIYS*GITHGL Trigger: CAGCCCATGAGTTATTCCTCAGGAATAGATTCCATA...TTGTTCCCAACCACTGTCCCAAAAATTGATGATCTCAAGTCTCTTTTCAAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCAGTGTGTCTACAGACTaGCTACTGAGAATCCAACAA	+
Preference number: 2 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGSVSTD*LLRIQQ Trigger: TTGTTGGATTCTCAGTAGTCAGTCTGTAGACACACT...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	AATTATGCCTCAGATAAATCTCACTGCCTACCAGACCTGGACAAAGCTTCACTTCAATTTTTGGGACAGTaGTTGGGAACAAAGTTAGAA	+
Preference number: 2 (lower is better) Translates to: NYASDKSHCLPDLDKASLQFLGQ*LGTKLE Trigger: TTCTAACTTTGTTCCCAACCACTGTCCCAAAAATTG...AAGTGAAGCTTTGTCCAGGTCTGGTAGGCAGTGAGATTTATCTGAGGCATAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	AGACACTGCCACATGCTATGTTCCCTGGAACTTGTTTTACTTGTAAGCTTGTTATGCTTTAAAAAGTTGTaGAGTCTCAGCAATGCCATG	+
Preference number: 2 (lower is better) Translates to: RHCHMLCSLELVLLVSLLCFKKL*SLSNAM Trigger: CATGGCATTGCTGAGACTCCACAACTTTTTAAAGCA...TAACAAGCTTACAAGTAAAACAAGTTCCAGGGAACATAGCATGTGGCAGTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	AGACACTGCCACATGCTATGTTCCCTGGAACTTGTTTTACTTGTAAGCTTGTTAGTCTCAGCAATGCCATaGTCAATATATGCTAAGAAT	+
Preference number: 2 (lower is better) Translates to: RHCHMLCSLELVLLVSLLVSAMP*SIYAKN Trigger: ATTCTTAGCATATATTGATCATGGCATTGCTGAGAC...TAACAAGCTTACAAGTAAAACAAGTTCCAGGGAACATAGCATGTGGCAGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCATGGGAAACTTATTCTaGGGACAAAAGCAACAGACA	+
Preference number: 2 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGMGNLF*GQKQQT Trigger: TGTCTGTTGCTTTTGTCCTCAGAATAAGTTTCCCAT...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	GATGAGATTTATGGGAAACTTATTCTGAGGACAAAAGCAACAGACAGCTCAAGTATCTCTGCTTTCATTTaGCTTTCAGTGAAGTCTTAC	+
Preference number: 2 (lower is better) Translates to: DEIYGKLILRTKATDSSSISAFI*LSVKSY Trigger: GTAAGACTTCACTGAAAGTCAAATGAAAGCAGAGAT...ACTTGAGCTGTCTGTTGCTTTTGTCCTCAGAATAAGTTTCCCATAAATCTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR TCA 90 bp	TGTTTTTATTTAGCAACAAGAATTATGCCTCAGATAAATCTCACTGCCTACCAGATGGGAAACTTATTCTaGGGACAAAAGCAACAGACA	+
Preference number: 2 (lower is better) Translates to: CFYLATRIMPQINLTAYQMGNLF*GQKQQT Trigger: TGTCTGTTGCTTTTGTCCTCAGAATAAGTTTCCCAT...CTGGTAGGCAGTGAGATTTATCTGAGGCATAATTCTTGTTGCTAAATAAAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	TGTTTTTATTTAGCAACAAGAATTATGCCTCAGATAAATCTCACTGCCTACCAGGAGATCATCAATTTTTaGGACAGTGGTTGGGAACAA	+
Preference number: 2 (lower is better) Translates to: CFYLATRIMPQINLTAYQEIINF*DSGWEQ Trigger: TTGTTCCCAACCACTGTCCCAAAAATTGATGATCTC...CTGGTAGGCAGTGAGATTTATCTGAGGCATAATTCTTGTTGCTAAATAAAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	TGTTTTTATTTAGCAACAAGAATTATGCCTCAGATAAATCTCACTGCCTACCAGTGCTTTAAAAAGTTGTaGAGTCTCAGCAATGCCATG	+
Preference number: 2 (lower is better) Translates to: CFYLATRIMPQINLTAYQCFKKL*SLSNAM Trigger: CATGGCATTGCTGAGACTCCACAACTTTTTAAAGCA...CTGGTAGGCAGTGAGATTTATCTGAGGCATAATTCTTGTTGCTAAATAAAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCATCGATTCTGCTTTATaGAATCTATTCCTGAGGAAT	+
Preference number: 2 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGIDSAL*NLFLRN Trigger: ATTCCTCAGGAATAGATTCCATAAAGCAGAATCGAT...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR CAA 90 bp	CAATTCAGAAAGACTGTCTACTTCAGAGTGTTTAGATCTGAAAGGTaGAAATACCAGCAGAAGACCTGCAATATTTTTATCTCATCACTT	+
Preference number: 2 (lower is better) Translates to: QFRKTVYFRVFRSER*KYQQKTCNIFISSL Trigger: AAGTGATGAGATAAAAATATTGCAGGTCTTCTGCTGGTATTTCAACCTTTCAGATCTAAACACTCTGAAGTAGACAGTCTTTCTGAATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CCA 90 bp	ACAAATTCTAATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGTCAGTCATCAAGGCATaGCTCATTTTCAGTTTAAGA	+
Preference number: 2 (lower is better) Translates to: TNSNGGKTVPYDLLLIKRSVIKA*LIFSLR Trigger: TCTTAAACTGAAAATGAGCCATGCCTTGATGACTGA...CCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATTAGAATTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR GCA 90 bp	TGTTTTTATTTAGCAACAAGAATTATGCCTCAGATAAATCTCACTGCCTACCAGTACCAGCAGAAGACCTaGAATATTTTTATCTCATCA	+
Preference number: 2 (lower is better) Translates to: CFYLATRIMPQINLTAYQYQQKT*NIFISS Trigger: TGATGAGATAAAAATATTGCAGGTCTTCTGCTGGTA...CTGGTAGGCAGTGAGATTTATCTGAGGCATAATTCTTGTTGCTAAATAAAAACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR TCA 72 bp	TCCAGGCCTATGGCAGACAGGGGTCCAGCACCCAAGTaGTGCCAGAGAACTGCTCAGTCATCAAGGCATGGC	+
Preference number: 3 (lower is better) Translates to: SRPMADRGPAPK*CQRTAQSSRHG Trigger: GCCATGCCTTGATGACTGAGCAGTTCTCTGGCATCACTTGGGTGCTGGACCCCTGTCTGCCATAGGCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR CCA 72 bp	GCACCAGTGACACCTACTGCACCTAGAGACAGACGATaGCACAGACAGCAAGGAGTCTCGGCCTGCTTCTCC	+
Preference number: 3 (lower is better) Translates to: APVTPTAPRDRR*HRQQGVSACFS Trigger: GGAGAAGCAGGCCGAGACTCCTTGCTGTCTGTGCCATCGTCTGTCTCTAGGTGCAGTAGGTGTCACTGGTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR CCA 72 bp	AATCAGGAGTGGGTTGAAGTAGCTTCTCCACAGAGGTaGGGTGGCCCGGGTGACAAGTGGTCCTGGGTGTAT	+
Preference number: 3 (lower is better) Translates to: NQEWVEVASPQR*GGPGDKWSWVY Trigger: ATACACCCAGGACCACTTGTCACCCGGGCCACCCCACCTCTGTGGAGAAGCTACTTCAACCCACTCCTGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR TCA 72 bp	CCTTCACAATCAGAGTTCAGAGAATCAGGAGTGGGTTaGAGTAGCTTCTCCACAGAGGTGGGGTGGCCCGGG	+
Preference number: 3 (lower is better) Translates to: PSQSEFRESGVG*SSFSTEVGWPG Trigger: CCCGGGCCACCCCACCTCTGTGGAGAAGCTACTTCAACCCACTCCTGATTCTCTGAACTCTGATTGTGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR GCA 72 bp	TGTGCTGACAGACCCTCTCCAATAGCACCACGAGCTTaGAGTGCAGTCCTTCCCTCTGAGAAGAGATCACAT	+
Preference number: 3 (lower is better) Translates to: CADRPSPIAPRA*SAVLPSEKRSH Trigger: ATGTGATCTCTTCTCAGAGGGAAGGACTGCACTGCAAGCTCGTGGTGCTATTGGAGAGGGTCTGTCAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR CCA 72 bp	AGCCCAACCTTCATTCCTGGAACTTGCTGTTGCCTTTaGTTATCAGGCAACAGACAATCACCCCACCCCACC	+
Preference number: 3 (lower is better) Translates to: SPTFIPGTCCCL*LSGNRQSPHPT Trigger: GGTGGGGTGGGGTGATTGTCTGTTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGGAATGAAGGTTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	TCAGAGAATCAGGAGTGGGTTGAAGTAGCTTCTCCACAGAGGTGGGGTGGCCCGTTTGCACAGTTGTCTTaGCTCAGGATACACAGCAGA	+
Preference number: 3 (lower is better) Translates to: SENQEWVEVASPQRWGGPFAQLS*LRIHSR Trigger: TCTGCTGTGTATCCTGAGCAAAGACAACTGTGCAAA...CGGGCCACCCCACCTCTGTGGAGAAGCTACTTCAACCCACTCCTGATTCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR TCA 72 bp	TTGGTAGAGACCTGCTCTCAACACCCACGGTTGCAATaGGTCTTTGGTTCAGGGCTCAAAGGCAACCATCTG	+
Preference number: 3 (lower is better) Translates to: LVETCSQHPRLQ*VFGSGLKGNHL Trigger: CAGATGGTTGCCTTTGAGCCCTGAACCAAAGACTCATTGCAACCGTGGGTGTTGAGAGCAGGTCTCTACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CCA 72 bp	GAATCCCTTCACAATCAGAGTTCAGAGAATCAGGAGTaGGTTGAAGTAGCTTCTCCACAGAGGTGGGGTGGC	+
Preference number: 3 (lower is better) Translates to: ESLHNQSSENQE*VEVASPQRWGG Trigger: GCCACCCCACCTCTGTGGAGAAGCTACTTCAACCCACTCCTGATTCTCTGAACTCTGATTGTGAAGGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGTTTGCACAGTTGTCTTaGCTCAGGATACACAGCAGA	+
Preference number: 3 (lower is better) Translates to: LLRISTHIGAGSRMQEEWFAQLS*LRIHSR Trigger: TCTGCTGTGTATCCTGAGCAAAGACAACTGTGCAAA...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	TACAGTGCCCAGCTCACACATGTACTTAGACACTGCCACATGCTATGTTCCCTGGGTTGCAATGAGTCTTaGGTTCAGGGCTCAAAGGCA	+
Preference number: 3 (lower is better) Translates to: YSAQLTHVLRHCHMLCSLGCNES*VQGSKA Trigger: TGCCTTTGAGCCCTGAACCAAAGACTCATTGCAACC...CAGGGAACATAGCATGTGGCAGTGTCTAAGTACATGTGTGAGCTGGGCACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR TCA 72 bp	AACTGTTCCCAATGCCTGAGGGGAGGAGGTGAAGCTTaGCTGTGCCGTCTTTTCCAGGAACATATCCTTCTT	+
Preference number: 3 (lower is better) Translates to: NCSQCLRGGGEA*LCRLFQEHILL Trigger: AAGAAGGATATGTTCCTGGAAAAGACGGCACAGTCAAGCTTCACCTCCTCCCCTCAGGCATTGGGAACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR GCA 72 bp	AGACAGGGGTCCAGCACCCAAGTGATGCCAGAGAACTaGTCAGTCATCAAGGCATGGCTCATTTTCAGTTTA	+
Preference number: 3 (lower is better) Translates to: RQGSSTQVMPEN*SVIKAWLIFSL Trigger: TAAACTGAAAATGAGCCATGCCTTGATGACTGAGCAGTTCTCTGGCATCACTTGGGTGCTGGACCCCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	TACAGTGCCCAGCTCACACATGTACTTAGACACTGCCACATGCTATGTTCCCTGTCCTGGAACTTGCTGTaGCCTTTGGTTATCAGGCAA	+
Preference number: 3 (lower is better) Translates to: YSAQLTHVLRHCHMLCSLSWNLL*PLVIRQ Trigger: TTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGGA...CAGGGAACATAGCATGTGGCAGTGTCTAAGTACATGTGTGAGCTGGGCACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	ATGACACTTGAAGTCCCAGAGGCAGGGCGGTGTGGCAACACTGTCAAGCTGAGCCTATTAATGATGAAATaGAAACCAAGCCCAACCTTC	+
Preference number: 3 (lower is better) Translates to: MTLEVPEAGRCGNTVKLSLLMMK*KPSPTF Trigger: GAAGGTTGGGCTTGGTTTCAATTTCATCATTAATAG...GCTCAGCTTGACAGTGTTGCCACACCGCCCTGCCTCTGGGACTTCAAGTGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CCA 72 bp	GAAAATGCAACTCACTACAGGGCTACAGAATGTACCTaGCCCCAGCCTGTATACAGCCAGTCTTCATATCCT	+
Preference number: 3 (lower is better) Translates to: ENATHYRATECT*PQPVYSQSSYP Trigger: AGGATATGAAGACTGGCTGTATACAGGCTGGGGCCAGGTACATTCTGTAGCCCTGTAGTGAGTTGCATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	CAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTGGGTTACAGGTTGCAATGAGTCTTaGGTTCAGGGCTCAAAGGCA	+
Preference number: 3 (lower is better) Translates to: QNRAAKGNASNTYHEWVTGCNES*VQGSKA Trigger: TGCCTTTGAGCCCTGAACCAAAGACTCATTGCAACC...TGTAACCCACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	TACAGTGCCCAGCTCACACATGTACTTAGACACTGCCACATGCTATGTTCCCTGTGTAACTTTGCACAGTaGTCTTTGCTCAGGATACAC	+
Preference number: 3 (lower is better) Translates to: YSAQLTHVLRHCHMLCSLCNFAQ*SLLRIH Trigger: GTGTATCCTGAGCAAAGACAACTGTGCAAAGTTACA...CAGGGAACATAGCATGTGGCAGTGTCTAAGTACATGTGTGAGCTGGGCACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	GGTTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCTTCATTCCTGGAACTaGCTGTTGCCTTTGGTTATC	+
Preference number: 3 (lower is better) Translates to: GSTWKIKQVCLWPSFYSALHSWN*LLPLVI Trigger: GATAACCAAAGGCAACAGCAAGTTCCAGGAATGAAG...GGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGCATGAAGAAGCAGGTTaGTCACTAATGAGCTTATTT	+
Preference number: 3 (lower is better) Translates to: LLRISTHIGAGSRMQEEWHEEAG*SLMSLF Trigger: AAATAAGCTCATTAGTGACAAACCTGCTTCTTCATG...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR TCA 72 bp	TATAAATCTGTGAAAATGGGGGCTTTCAGTATGTGCTaGCAGACCCTCTCCAATAGCACCACGAGCTTGCAG	+
Preference number: 3 (lower is better) Translates to: YKSVKMGAFSMC*QTLSNSTTSLQ Trigger: CTGCAAGCTCGTGGTGCTATTGGAGAGGGTCTGTCAGCACATACTGAAAGCCCCCATTTTCACAGATTTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR CCA 72 bp	CTGAGGACAAAAGCAACAGACAGCTCAAGTCTCTACTaGACTGAGACTCTAGAAAGGACACACTTGGCTAAC	+
Preference number: 3 (lower is better) Translates to: LRTKATDSSSLY*TETLERTHLAN Trigger: GTTAGCCAAGTGTGTCCTTTCTAGAGTCTCAGTCCAGTAGAGACTTGAGCTGTCTGTTGCTTTTGTCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR GCA 72 bp	TTCTACAGTGCCCAGCTCACACATGTACTTAGACACTaGCACATGCTATGTTCCCTGGAACTTGTTTTACTT	+
Preference number: 3 (lower is better) Translates to: FYSAQLTHVLRH*HMLCSLELVLL Trigger: AAGTAAAACAAGTTCCAGGGAACATAGCATGTGGCAGTGTCTAAGTACATGTGTGAGCTGGGCACTGTAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CCA 72 bp	ATGAATAATACTACATTCATGGGAGGAGGGCAAAACTaGGGTCAATGCAGAACAGAGCAGCAAAAGGCAATG	+
Preference number: 3 (lower is better) Translates to: MNNTTFMGGGQN*GQCRTEQQKAM Trigger: CATTGCCTTTTGCTGCTCTGTTCTGCATTGACCCCAGTTTTGCCCTCCTCCCATGAATGTAGTATTATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	AATTATGCCTCAGATAAATCTCACTGCCTACCAGACCTGGACAAAGCTTCACTTCTTCATTCCTGGAACTaGCTGTTGCCTTTGGTTATC	+
Preference number: 3 (lower is better) Translates to: NYASDKSHCLPDLDKASLLHSWN*LLPLVI Trigger: GATAACCAAAGGCAACAGCAAGTTCCAGGAATGAAG...AAGTGAAGCTTTGTCCAGGTCTGGTAGGCAGTGAGATTTATCTGAGGCATAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	GTTGTCTTTGCTCAGGATACACAGCAGAATAAACCACACTACCCTATCTCCTGCCTCCAAAGGTTACTCTaGATAATACCTGTGAGTATG	+
Preference number: 3 (lower is better) Translates to: VVFAQDTQQNKPHYPISCLQRLL*IIPVSM Trigger: CATACTCACAGGTATTATCAAGAGTAACCTTTGGAG...GCAGGAGATAGGGTAGTGTGGTTTATTCTGCTGTGTATCCTGAGCAAAGACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR GCA 72 bp	AAATTGAAACCAAGCCCAACCTTCATTCCTGGAACTTaGTGTTGCCTTTGGTTATCAGGCAACAGACAATCA	+
Preference number: 3 (lower is better) Translates to: KLKPSPTFIPGT*CCLWLSGNRQS Trigger: TGATTGTCTGTTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGGAATGAAGGTTGGGCTTGGTTTCAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CCA 72 bp	AATGATGAAATTGAAACCAAGCCCAACCTTCATTCCTaGAACTTGCTGTTGCCTTTGGTTATCAGGCAACAG	+
Preference number: 3 (lower is better) Translates to: NDEIETKPNLHS*NLLLPLVIRQQ Trigger: CTGTTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGGAATGAAGGTTGGGCTTGGTTTCAATTTCATCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	GTTGTCTTTGCTCAGGATACACAGCAGAATAAACCACACTACCCTATCTCCTGCTCCTTGAAAAGAGACTaGAGATCATCAATTTTTGGG	+
Preference number: 3 (lower is better) Translates to: VVFAQDTQQNKPHYPISCSLKRD*RSSIFG Trigger: CCCAAAAATTGATGATCTCAAGTCTCTTTTCAAGGA...GCAGGAGATAGGGTAGTGTGGTTTATTCTGCTGTGTATCCTGAGCAAAGACAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCATCCTTGAAAAGAGACTaGAGATCATCAATTTTTGGG	+
Preference number: 3 (lower is better) Translates to: FHLEDKASVSLAFFLQCPSLKRD*RSSIFG Trigger: CCCAAAAATTGATGATCTCAAGTCTCTTTTCAAGGA...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCTCCTGGAACTTGCTGTaGCCTTTGGTTATCAGGCAA	+
Preference number: 3 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGSWNLL*PLVIRQ Trigger: TTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGGA...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	AGACACTGCCACATGCTATGTTCCCTGGAACTTGTTTTACTTGTAAGCTTGTTACTATTAATGATGAAATaGAAACCAAGCCCAACCTTC	+
Preference number: 3 (lower is better) Translates to: RHCHMLCSLELVLLVSLLLLMMK*KPSPTF Trigger: GAAGGTTGGGCTTGGTTTCAATTTCATCATTAATAG...TAACAAGCTTACAAGTAAAACAAGTTCCAGGGAACATAGCATGTGGCAGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR TCA 72 bp	ACTTTCCATAAACTCAAACACCAGGAGAACACTGGCTaGAGAAATCCATGCTTCTACGAAAAGAATAAAGAG	+
Preference number: 3 (lower is better) Translates to: TFHKLKHQENTG*RNPCFYEKNKE Trigger: CTCTTTATTCTTTTCGTAGAAGCATGGATTTCTTCAGCCAGTGTTCTCCTGGTGTTTGAGTTTATGGAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR TCA 72 bp	ACAATAGTATCGATTCTGCTTTATGGAATCTATTCCTaGGGAATAACTCATGGGCTGCTGAAGATAGTTCCA	+
Preference number: 3 (lower is better) Translates to: TIVSILLYGIYS*GITHGLLKIVP Trigger: TGGAACTATCTTCAGCAGCCCATGAGTTATTCCTCAGGAATAGATTCCATAAAGCAGAATCGATACTATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	TTAGATGAGATTTATGGGAAACTTATTCTGAGGACAAAAGCAACAGACAGCTCACTAGAAAGGACACACTaGGCTAACACATGTTATTGT	+
Preference number: 3 (lower is better) Translates to: LDEIYGKLILRTKATDSSLERTH*ANTCYC Trigger: ACAATAACATGTGTTAGCCAAGTGTGTCCTTTCTAG...TGAGCTGTCTGTTGCTTTTGTCCTCAGAATAAGTTTCCCATAAATCTCATCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	GAAACTCTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCTTTTCAGATGTAACTTaGCACAGTTGTCTTTGCTCA	+
Preference number: 3 (lower is better) Translates to: ETLTTRTQHFPECKCRLFFSDVT*HSCLCS Trigger: TGAGCAAAGACAACTGTGCAAAGTTACATCTGAAAA...GAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAGAGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	CTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCATTTGTTTTAGATCTGAAAGGTaGAAATACCAGCAGAAGACC	+
Preference number: 3 (lower is better) Translates to: LTTRTQHFPECKCRLFICFRSER*KYQQKT Trigger: GGTCTTCTGCTGGTATTTCAACCTTTCAGATCTAAA...ACAAATGAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR-3UTR CAA 90 bp	CTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCATTTGTTTTTCAGATGTAACTTaGCACAGTTGTCTTTGCTCA	+
Preference number: 3 (lower is better) Translates to: LTTRTQHFPECKCRLFICFSDVT*HSCLCS Trigger: TGAGCAAAGACAACTGTGCAAAGTTACATCTGAAAA...ACAAATGAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR GCA 72 bp	TTCATATGCAGATTAATTAGTAAAGGTGCTACCTATTaGATATTAAATACCTCCAAGGACAGCATCTGGATT	+
Preference number: 3 (lower is better) Translates to: FICRLISKGATY*ILNTSKDSIWI Trigger: AATCCAGATGCTGTCCTTGGAGGTATTTAATATGCAATAGGTAGCACCTTTACTAATTAATCTGCATATGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGGCTTCTCCACAGAGGTaGGGTGGCCCGGGTGACAAG	+
Preference number: 4 (lower is better) Translates to: LLRISTHIGAGSRMQEEWASPQR*GGPGDK Trigger: CTTGTCACCCGGGCCACCCCACCTCTGTGGAGAAGC...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR TCA 90 bp	ATGACACTTGAAGTCCCAGAGGCAGGGCGGTGTGGCAACACTGTCAAGCTGAGCGCAGAAGAGAGCCGCTaGGGACCCAAAAGAAAAGGC	+
Preference number: 4 (lower is better) Translates to: MTLEVPEAGRCGNTVKLSAEESR*GPKRKG Trigger: GCCTTTTCTTTTGGGTCCTCAGCGGCTCTCTTCTGC...GCTCAGCTTGACAGTGTTGCCACACCGCCCTGCCTCTGGGACTTCAAGTGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	ATGACACTTGAAGTCCCAGAGGCAGGGCGGTGTGGCAACACTGTCAAGCTGAGCACTGAGAAGATGTGTTaGACCCACAGTGCTGGACTT	+
Preference number: 4 (lower is better) Translates to: MTLEVPEAGRCGNTVKLSTEKMC*THSAGL Trigger: AAGTCCAGCACTGTGGGTCCAACACATCTTCTCAGT...GCTCAGCTTGACAGTGTTGCCACACCGCCCTGCCTCTGGGACTTCAAGTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	TGTGTGACATCAATCCTCAAGGGTAGATGTGGGCTGCCTCATGCTGTATGTTGGCATCAGGCATGTGAGTaGTCGGAACGATGGCAGAGG	+
Preference number: 4 (lower is better) Translates to: CVTSILKGRCGLPHAVCWHQACE*SERWQR Trigger: CCTCTGCCATCGTTCCGAGCACTCACATGCCTGATG...CCAACATACAGCATGAGGCAGCCCACATCTACCCTTGAGGATTGATGTCACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	GTGCAGTCCTTCCCTCTGAGAAGAGATCACATGACTGGGCATGCTCACACTTCAACTTGCCAGCTTTTCTaGATGGCTCGTAGGGCACTC	+
Preference number: 4 (lower is better) Translates to: VQSFPLRRDHMTGHAHTSTCQLF*MARRAL Trigger: GAGTGCCCTACGAGCCATCCAGAAAAGCTGGCAAGT...TGAAGTGTGAGCATGCCCAGTCATGTGATCTCTTCTCAGAGGGAAGGACTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	TACAGTGCCCAGCTCACACATGTACTTAGACACTGCCACATGCTATGTTCCCTGCGAAGGAGTTCTTTGTaGTTCACCAGCTCCTGCAGC	+
Preference number: 4 (lower is better) Translates to: YSAQLTHVLRHCHMLCSLRRSSL*FTSSCS Trigger: GCTGCAGGAGCTGGTGAAGCACAAAGAACTCCTTCG...CAGGGAACATAGCATGTGGCAGTGTCTAAGTACATGTGTGAGCTGGGCACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	TGTGTGACATCAATCCTCAAGGGTAGATGTGGGCTGCCTCATGCTGTATGTTGGGACCTGCACGTGGGTTaGAAACCACTTTTGGGCTTG	+
Preference number: 4 (lower is better) Translates to: CVTSILKGRCGLPHAVCWDLHVG*KPLLGL Trigger: CAAGCCCAAAAGTGGTTTCCAACCCACGTGCAGGTC...CCAACATACAGCATGAGGCAGCCCACATCTACCCTTGAGGATTGATGTCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CCA 90 bp	GTTGTCTTTGCTCAGGATACACAGCAGAATAAACCACACTACCCTATCTCCTGCGGCCCGGGTGACAAGTaGTCCTGGGTGTATACAGCT	+
Preference number: 4 (lower is better) Translates to: VVFAQDTQQNKPHYPISCGPGDK*SWVYTA Trigger: AGCTGTATACACCCAGGACCACTTGTCACCCGGGCC...GCAGGAGATAGGGTAGTGTGGTTTATTCTGCTGTGTATCCTGAGCAAAGACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
3UTR CAA 72 bp	AAGCCCAACCTTCATTCCTGGAACTTGCTGTTGCCTTaGGTTATCAGGCAACAGACAATCACCCCACCCCAC	+
Preference number: 4 (lower is better) Translates to: KPNLHSWNLLLP*VIRQQTITPPH Trigger: GTGGGGTGGGGTGATTGTCTGTTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGGAATGAAGGTTGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCAGCAGAAGAGAGCCGCTaGGGACCCAAAAGAAAAGGC	+
Preference number: 4 (lower is better) Translates to: FHLEDKASVSLAFFLQCPAEESR*GPKRKG Trigger: GCCTTTTCTTTTGGGTCCTCAGCGGCTCTCTTCTGC...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	TACAGTGCCCAGCTCACACATGTACTTAGACACTGCCACATGCTATGTTCCCTGACTGTGACCTGCACGTaGGTTGGAAACCACTTTTGG	+
Preference number: 4 (lower is better) Translates to: YSAQLTHVLRHCHMLCSLTVTCT*VGNHFW Trigger: CCAAAAGTGGTTTCCAACCCACGTGCAGGTCACAGT...CAGGGAACATAGCATGTGGCAGTGTCTAAGTACATGTGTGAGCTGGGCACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CCA 90 bp	TACAGTGCCCAGCTCACACATGTACTTAGACACTGCCACATGCTATGTTCCCTGGAGTGCTCGGAACGATaGCAGAGGACGTATCAGAAA	+
Preference number: 4 (lower is better) Translates to: YSAQLTHVLRHCHMLCSLECSER*QRTYQK Trigger: TTTCTGATACGTCCTCTGCCATCGTTCCGAGCACTC...CAGGGAACATAGCATGTGGCAGTGTCTAAGTACATGTGTGAGCTGGGCACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	ATGACACTTGAAGTCCCAGAGGCAGGGCGGTGTGGCAACACTGTCAAGCTGAGCTTCTCAGAAGATAAGTaGGACCCAGTTAAATCAGAC	+
Preference number: 4 (lower is better) Translates to: MTLEVPEAGRCGNTVKLSFSEDK*DPVKSD Trigger: GTCTGATTTAACTGGGTCCCACTTATCTTCTGAGAA...GCTCAGCTTGACAGTGTTGCCACACCGCCCTGCCTCTGGGACTTCAAGTGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	TGTGTGACATCAATCCTCAAGGGTAGATGTGGGCTGCCTCATGCTGTATGTTGGGTTGGAAACCACTTTTaGGCTTGCTCAGACAGCATC	+
Preference number: 4 (lower is better) Translates to: CVTSILKGRCGLPHAVCWVGNHF*ACSDSI Trigger: GATGCTGTCTGAGCAAGCCCAAAAGTGGTTTCCAAC...CCAACATACAGCATGAGGCAGCCCACATCTACCCTTGAGGATTGATGTCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CCA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGGAGACTTCCACTTTCTaGAACAACTCCAAAGGAATC	+
Preference number: 4 (lower is better) Translates to: LLRISTHIGAGSRMQEEWETSTF*NNSKGI Trigger: GATTCCTTTGGAGTTGTTCCAGAAAGTGGAAGTCTC...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	ATGACACTTGAAGTCCCAGAGGCAGGGCGGTGTGGCAACACTGTCAAGCTGAGCACAATGCTGCCAGGTTaGTTCAATTTAGAAGTATCA	+
Preference number: 4 (lower is better) Translates to: MTLEVPEAGRCGNTVKLSTMLPG*FNLEVS Trigger: TGATACTTCTAAATTGAACCAACCTGGCAGCATTGT...GCTCAGCTTGACAGTGTTGCCACACCGCCCTGCCTCTGGGACTTCAAGTGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CAA 72 bp	AGACCTGCTCTCAACACCCACGGTTGCAATGAGTCTTaGGTTCAGGGCTCAAAGGCAACCATCTGTTCTATT	+
Preference number: 4 (lower is better) Translates to: RPALNTHGCNES*VQGSKATICSI Trigger: AATAGAACAGATGGTTGCCTTTGAGCCCTGAACCAAAGACTCATTGCAACCGTGGGTGTTGAGAGCAGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	GTTGTCTTTGCTCAGGATACACAGCAGAATAAACCACACTACCCTATCTCCTGCTGTCCGGGATTTTCCTaGGGTCTTCACTGCTTGTTG	+
Preference number: 4 (lower is better) Translates to: VVFAQDTQQNKPHYPISCCPGFS*GLHCLL Trigger: CAACAAGCAGTGAAGACCTCAGGAAAATCCCGGACA...GCAGGAGATAGGGTAGTGTGGTTTATTCTGCTGTGTATCCTGAGCAAAGACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	CAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTGGGTTACATGTCCGGGATTTTCCTaGGGTCTTCACTGCTTGTTG	+
Preference number: 4 (lower is better) Translates to: QNRAAKGNASNTYHEWVTCPGFS*GLHCLL Trigger: CAACAAGCAGTGAAGACCTCAGGAAAATCCCGGACA...TGTAACCCACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	ACAAATTCTAATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGGTGGGGTGGCCCGGGTaGCAAGTGGTCCTGGGTGTA	+
Preference number: 4 (lower is better) Translates to: TNSNGGKTVPYDLLLIKRVGWPG*QVVLGV Trigger: TACACCCAGGACCACTTGTCACCCGGGCCACCCCAC...CCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATTAGAATTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR GCA 90 bp	GCCTGTATACAGCCAGTCTTCATATCCTCAATTCAGAAAGACTGTCTACTTCAGTGGAGCACTGTGACCTaGACGTGGGTTGGAAACCAC	+
Preference number: 4 (lower is better) Translates to: ACIQPVFISSIQKDCLLQWSTVT*TWVGNH Trigger: GTGGTTTCCAACCCACGTGCAGGTCACAGTGCTCCA...CTGAAGTAGACAGTCTTTCTGAATTGAGGATATGAAGACTGGCTGTATACAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR TCA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGCTTGTTGGATTCACATaGAAACTTGAAGATGGCATT	+
Preference number: 4 (lower is better) Translates to: LLRISTHIGAGSRMQEEWLVGFT*KLEDGI Trigger: AATGCCATCTTCAAGTTTTCATGTGAATCCAACAAG...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	TGTGTGACATCAATCCTCAAGGGTAGATGTGGGCTGCCTCATGCTGTATGTTGGTCCTGCTATCTCTCTTaGCAGTCACTCTTTCAAAGA	+
Preference number: 4 (lower is better) Translates to: CVTSILKGRCGLPHAVCWSCYLS*QSLFQR Trigger: TCTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGA...CCAACATACAGCATGAGGCAGCCCACATCTACCCTTGAGGATTGATGTCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	GGTCAATGCAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTACTGAGAAGATGTGTTaGACCCACAGTGCTGGACTT	+
Preference number: 4 (lower is better) Translates to: GQCRTEQQKAMLPTLTMSTEKMC*THSAGL Trigger: AAGTCCAGCACTGTGGGTCCAACACATCTTCTCAGT...ACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTGCATTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	TGTGTGACATCAATCCTCAAGGGTAGATGTGGGCTGCCTCATGCTGTATGTTGGTTCTCTTTGCCCAACTaGATTATGGTGTATGTGTCA	+
Preference number: 4 (lower is better) Translates to: CVTSILKGRCGLPHAVCWFSLPN*IMVYVS Trigger: TGACACATACACCATAATTCAGTTGGGCAAAGAGAA...CCAACATACAGCATGAGGCAGCCCACATCTACCCTTGAGGATTGATGTCACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR GCA 90 bp	TACAGTGCCCAGCTCACACATGTACTTAGACACTGCCACATGCTATGTTCCCTGCATTGGTACCACTTTTaGCTTTTGGCTTCAGATCTT	+
Preference number: 4 (lower is better) Translates to: YSAQLTHVLRHCHMLCSLHWYHF*LLASDL Trigger: AAGATCTGAAGCCAAAAGGCAAAAGTGGTACCAATG...CAGGGAACATAGCATGTGGCAGTGTCTAAGTACATGTGTGAGCTGGGCACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR GCA 90 bp	GTGCAGTCCTTCCCTCTGAGAAGAGATCACATGACTGGGCATGCTCACACTTCAGGTTTGGATTTCATCTaGATTTCACCACTTGAAAAC	+
Preference number: 4 (lower is better) Translates to: VQSFPLRRDHMTGHAHTSGLDFI*ISPLEN Trigger: GTTTTCAAGTGGTGAAATGCAGATGAAATCCAAACC...TGAAGTGTGAGCATGCCCAGTCATGTGATCTCTTCTCAGAGGGAAGGACTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	ACCACACTACCCTATCTCCTGCTTATACTTTCCATAAACTCAAACACCAGGAGATTGGACCCACAGTGCTaGACTTCAGCTTCTCAGAAG	+
Preference number: 4 (lower is better) Translates to: TTLPYLLLILSINSNTRRLDPQC*TSASQK Trigger: CTTCTGAGAAGCTGAAGTCCAGCACTGTGGGTCCAA...TCTCCTGGTGTTTGAGTTTATGGAAAGTATAAGCAGGAGATAGGGTAGTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	GGTGCTACCTATTGCATATTAAATACCTCCAAGGACAGCATCTGGATTATTAAAGCACTCGCAGGATGCTaGGTGTCTCTTCCATCACCC	+
Preference number: 4 (lower is better) Translates to: GATYCILNTSKDSIWIIKALAGC*VSLPSP Trigger: GGGTGATGGAAGAGACACCCAGCATCCTGCGAGTGC...TTTAATAATCCAGATGCTGTCCTTGGAGGTATTTAATATGCAATAGGTAGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCATGTCCCATGGCTCACTaGTTTCTTCAAATGGATTCT	+
Preference number: 4 (lower is better) Translates to: FHLEDKASVSLAFFLQCPCPMAH*FLQMDS Trigger: AGAATCCATTTGAAGAAAGCAGTGAGCCATGGGACA...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	GGTCAATGCAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTTGTCCCATGGCTCACTaGTTTCTTCAAATGGATTCT	+
Preference number: 4 (lower is better) Translates to: GQCRTEQQKAMLPTLTMSCPMAH*FLQMDS Trigger: AGAATCCATTTGAAGAAAGCAGTGAGCCATGGGACA...ACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTGCATTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCCGAAGGAGTTCTTTGTaGTTCACCAGCTCCTGCAGC	+
Preference number: 4 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGRRSSL*FTSSCS Trigger: GCTGCAGGAGCTGGTGAAGCACAAAGAACTCCTTCG...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	AGACACTGCCACATGCTATGTTCCCTGGAACTTGTTTTACTTGTAAGCTTGTTAGAGTGCTCGGAACGATaGCAGAGGACGTATCAGAAA	+
Preference number: 4 (lower is better) Translates to: RHCHMLCSLELVLLVSLLECSER*QRTYQK Trigger: TTTCTGATACGTCCTCTGCCATCGTTCCGAGCACTC...TAACAAGCTTACAAGTAAAACAAGTTCCAGGGAACATAGCATGTGGCAGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCAGAGACTTCCACTTTCTaGAACAACTCCAAAGGAATC	+
Preference number: 4 (lower is better) Translates to: FHLEDKASVSLAFFLQCPETSTF*NNSKGI Trigger: GATTCCTTTGGAGTTGTTCCAGAAAGTGGAAGTCTC...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	ACAAATTCTAATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGGCACTCGCAGGATGCTaGGTGTCTCTTCCATCACCC	+
Preference number: 4 (lower is better) Translates to: TNSNGGKTVPYDLLLIKRALAGC*VSLPSP Trigger: GGGTGATGGAAGAGACACCCAGCATCCTGCGAGTGC...CCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATTAGAATTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CAA 72 bp	CCACCCCAGCTCATTTTCAGATGTAACTTTGCACAGTaGTCTTTGCTCAGGATACACAGCAGAATAAACCAC	+
Preference number: 4 (lower is better) Translates to: PPQLIFRCNFAQ*SLLRIHSRINH Trigger: GTGGTTTATTCTGCTGTGTATCCTGAGCAAAGACAACTGTGCAAAGTTACATCTGAAAATGAGCTGGGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CAA 72 bp	GAAATTGAAACCAAGCCCAACCTTCATTCCTGGAACTaGCTGTTGCCTTTGGTTATCAGGCAACAGACAATC	+
Preference number: 4 (lower is better) Translates to: EIETKPNLHSWN*LLPLVIRQQTI Trigger: GATTGTCTGTTGCCTGATAACCAAAGGCAACAGCAAGTTCCAGGAATGAAGGTTGGGCTTGGTTTCAATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	GCCAGAGAACTGCTCAGTCATCAAGGCATGGCTCATTTTCAGTTTAAGAGTTTACTGCATTTCACCACTTaGAAACTCAGGATTGGCATC	+
Preference number: 4 (lower is better) Translates to: ARELLSHQGMAHFQFKSLLHFTT*KLRIGI Trigger: GATGCCAATCCTGAGTTTTCAAGTGGTGAAATGCAG...TAAACTCTTAAACTGAAAATGAGCCATGCCTTGATGACTGAGCAGTTCTCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	CTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCATTTGTCATCAGGCATGTGAGTaGTCGGAACGATGGCAGAGG	+
Preference number: 4 (lower is better) Translates to: LTTRTQHFPECKCRLFICHQACE*SERWQR Trigger: CCTCTGCCATCGTTCCGAGCACTCACATGCCTGATG...ACAAATGAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	ACCACACTACCCTATCTCCTGCTTATACTTTCCATAAACTCAAACACCAGGAGATTGAAAACTCAGGATTaGCATCAGGCATGTGAGTGC	+
Preference number: 4 (lower is better) Translates to: TTLPYLLLILSINSNTRRLKTQD*HQACEC Trigger: GCACTCACATGCCTGATGCCAATCCTGAGTTTTCAA...TCTCCTGGTGTTTGAGTTTATGGAAAGTATAAGCAGGAGATAGGGTAGTGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	GGTCAATGCAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTTTCTCAGAAGATAAGTaGGACCCAGTTAAATCAGAC	+
Preference number: 4 (lower is better) Translates to: GQCRTEQQKAMLPTLTMSFSEDK*DPVKSD Trigger: GTCTGATTTAACTGGGTCCCACTTATCTTCTGAGAA...ACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTGCATTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	AGACACTGCCACATGCTATGTTCCCTGGAACTTGTTTTACTTGTAAGCTTGTTACTGCATTTCACCACTTaGAAACTCAGGATTGGCATC	+
Preference number: 4 (lower is better) Translates to: RHCHMLCSLELVLLVSLLLHFTT*KLRIGI Trigger: GATGCCAATCCTGAGTTTTCAAGTGGTGAAATGCAG...TAACAAGCTTACAAGTAAAACAAGTTCCAGGGAACATAGCATGTGGCAGTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	ACGGTTGCAATGAGTCTTTGGTTCAGGGCTCAAAGGCAACCATCTGTTCTATTAAGATGGCATTATAGTTaGAGCCCTGAATTTTGCTGT	+
Preference number: 4 (lower is better) Translates to: TVAMSLWFRAQRQPSVLLRWHYS*SPEFCC Trigger: ACAGCAAAATTCAGGGCTTCAACTATAATGCCATCT...TAATAGAACAGATGGTTGCCTTTGAGCCCTGAACCAAAGACTCATTGCAACCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCAGGTTTGGATTTCATCTaGATTTCACCACTTGAAAAC	+
Preference number: 4 (lower is better) Translates to: FHLEDKASVSLAFFLQCPGLDFI*ISPLEN Trigger: GTTTTCAAGTGGTGAAATGCAGATGAAATCCAAACC...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	GAAACTCTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCGCTTGTCAGGTCTCCTaGTATCTCTCTTGCCAGTCA	+
Preference number: 4 (lower is better) Translates to: ETLTTRTQHFPECKCRLFACQVS*YLSCQS Trigger: TGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGC...GAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAGAGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	TTAGATGAGATTTATGGGAAACTTATTCTGAGGACAAAAGCAACAGACAGCTCAGCTTGTCAGGTCTCCTaGTATCTCTCTTGCCAGTCA	+
Preference number: 4 (lower is better) Translates to: LDEIYGKLILRTKATDSSACQVS*YLSCQS Trigger: TGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGC...TGAGCTGTCTGTTGCTTTTGTCCTCAGAATAAGTTTCCCATAAATCTCATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CAA 72 bp	CAGCTCATTTTCAGATGTAACTTTGCACAGTTGTCTTaGCTCAGGATACACAGCAGAATAAACCACACTACC	+
Preference number: 4 (lower is better) Translates to: QLIFRCNFAQLS*LRIHSRINHTT Trigger: GGTAGTGTGGTTTATTCTGCTGTGTATCCTGAGCAAAGACAACTGTGCAAAGTTACATCTGAAAATGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
3UTR CAA 72 bp	GAGTTTAGAGTATTTTACCCACTCCAAAGGTTACTCTaGATAATACCTGTGAGTATGGACAGGGCTGACAAC	+
Preference number: 4 (lower is better) Translates to: EFRVFYPLQRLL*IIPVSMDRADN Trigger: GTTGTCAGCCCTGTCCATACTCACAGGTATTATCAAGAGTAACCTTTGGAGTGGGTAAAATACTCTAAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCCCCACCAGGGACCTGTaGATCACTATAAGAAAAAGA	+
Preference number: 4 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGPTRDL*ITIRKR Trigger: TCTTTTTCTTATAGTGATGCACAGGTCCCTGGTGGG...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR GCA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCCACCTTCATCCACAATaGTGCCAGGTTGGTTCAATT	+
Preference number: 4 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGHLHPQ*CQVGSI Trigger: AATTGAACCAACCTGGCAGCATTGTGGATGAAGGTG...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCAGAATAAATTCATGCTaGTGTCCCATGGCTCACTGC	+
Preference number: 4 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGRINSC*CPMAHC Trigger: GCAGTGAGCCATGGGACAGCAGCATGAATTTATTCT...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	AATTATGCCTCAGATAAATCTCACTGCCTACCAGACCTGGACAAAGCTTCACTTTGGTGTATGTGTCATTaGTACCACTTTTGCCTTTTG	+
Preference number: 4 (lower is better) Translates to: NYASDKSHCLPDLDKASLWCMCH*YHFCLL Trigger: CAAAAGGCAAAAGTGGTACCAATGACACATACACCA...AAGTGAAGCTTTGTCCAGGTCTGGTAGGCAGTGAGATTTATCTGAGGCATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CCA 90 bp	AATTATGCCTCAGATAAATCTCACTGCCTACCAGACCTGGACAAAGCTTCACTTTGCCCAACTGAATTATaGTGTATGTGTCATTGGTAC	+
Preference number: 4 (lower is better) Translates to: NYASDKSHCLPDLDKASLCPTEL*CMCHWY Trigger: GTACCAATGACACATACACCATAATTCAGTTGGGCA...AAGTGAAGCTTTGTCCAGGTCTGGTAGGCAGTGAGATTTATCTGAGGCATAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR TCA 90 bp	GAAACTCTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCCGTCTTGTCCTTCATTaGCAAGTCAAACATGCTTGC	+
Preference number: 4 (lower is better) Translates to: ETLTTRTQHFPECKCRLFRLVLH*QVKHAC Trigger: GCAAGCATGTTTGACTTGTCAATGAAGGACAAGACG...GAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAGAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	ACCACACTACCCTATCTCCTGCTTATACTTTCCATAAACTCAAACACCAGGAGACTTGTTGGATTCACATaGAAACTTGAAGATGGCATT	+
Preference number: 4 (lower is better) Translates to: TTLPYLLLILSINSNTRRLVGFT*KLEDGI Trigger: AATGCCATCTTCAAGTTTTCATGTGAATCCAACAAG...TCTCCTGGTGTTTGAGTTTATGGAAAGTATAAGCAGGAGATAGGGTAGTGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	GAAACTCTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCCACCTTCATCCACAATaGTGCCAGGTTGGTTCAATT	+
Preference number: 4 (lower is better) Translates to: ETLTTRTQHFPECKCRLFHLHPQ*CQVGSI Trigger: AATTGAACCAACCTGGCAGCATTGTGGATGAAGGTG...GAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAGAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	GAAACTCTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCAGAATAAATTCATGCTaGTGTCCCATGGCTCACTGC	+
Preference number: 4 (lower is better) Translates to: ETLTTRTQHFPECKCRLFRINSC*CPMAHC Trigger: GCAGTGAGCCATGGGACAGCAGCATGAATTTATTCT...GAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAGAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	TGTTTTTATTTAGCAACAAGAATTATGCCTCAGATAAATCTCACTGCCTACCAGTTCAGATCTTTAGCTTaGAGCACTGTGACCTGCACG	+
Preference number: 4 (lower is better) Translates to: CFYLATRIMPQINLTAYQFRSLA*STVTCT Trigger: CGTGCAGGTCACAGTGCTCCAAGCTAAAGATCTGAA...CTGGTAGGCAGTGAGATTTATCTGAGGCATAATTCTTGTTGCTAAATAAAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CCA 90 bp	GAAACTCTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCTTGAAAACTCAGGATTaGCATCAGGCATGTGAGTGC	+
Preference number: 4 (lower is better) Translates to: ETLTTRTQHFPECKCRLFLKTQD*HQACEC Trigger: GCACTCACATGCCTGATGCCAATCCTGAGTTTTCAA...GAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAGAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCCCAAAGGAATCTATCTaGCGACTGAGAAGATGTGTT	+
Preference number: 4 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGPKESI*RLRRCV Trigger: AACACATCTTCTCAGTCGCCAGATAGATTCCTTTGG...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	AATTATGCCTCAGATAAATCTCACTGCCTACCAGACCTGGACAAAGCTTCACTTACAATGCTGCCAGGTTaGTTCAATTTAGAAGTATCA	+
Preference number: 4 (lower is better) Translates to: NYASDKSHCLPDLDKASLTMLPG*FNLEVS Trigger: TGATACTTCTAAATTGAACCAACCTGGCAGCATTGT...AAGTGAAGCTTTGTCCAGGTCTGGTAGGCAGTGAGATTTATCTGAGGCATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	CTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCATTTGTCGTCTTGTCCTTCATTaGCAAGTCAAACATGCTTGC	+
Preference number: 4 (lower is better) Translates to: LTTRTQHFPECKCRLFICRLVLH*QVKHAC Trigger: GCAAGCATGTTTGACTTGTCAATGAAGGACAAGACG...ACAAATGAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR TCA 90 bp	AATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAACAAAGGCAGATGGCATTATAGTTaGAGCCCTGAATTTTGCTGT	+
Preference number: 4 (lower is better) Translates to: NGGKTVPYDLLLIKRNKGRWHYS*SPEFCC Trigger: ACAGCAAAATTCAGGGCTTCAACTATAATGCCATCT...GCCTTTGTTCCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR GCA 90 bp	GAAACTCTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCTCCTGCTATCTCTCTTaGCAGTCACTCTTTCAAAGA	+
Preference number: 4 (lower is better) Translates to: ETLTTRTQHFPECKCRLFSCYLS*QSLFQR Trigger: TCTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGA...GAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAGAGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	AGACACTGCCACATGCTATGTTCCCTGGAACTTGTTTTACTTGTAAGCTTGTTAAGTCACATTTGTAAATaGGTCACTCTGTCTTCCAAA	+
Preference number: 4 (lower is better) Translates to: RHCHMLCSLELVLLVSLLSHICK*VTLSSK Trigger: TTTGGAAGACAGAGTGACCCATTTACAAATGTGACT...TAACAAGCTTACAAGTAAAACAAGTTCCAGGGAACATAGCATGTGGCAGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	CTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCATTTGTCCAAAGGAATCTATCTaGCGACTGAGAAGATGTGTT	+
Preference number: 4 (lower is better) Translates to: LTTRTQHFPECKCRLFICPKESI*RLRRCV Trigger: AACACATCTTCTCAGTCGCCAGATAGATTCCTTTGG...ACAAATGAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CCA 90 bp	TTCCTTGAAAAGAGACTTGAGATCATCAATTTTTGGGACAGTGGTTGGGAACAAAGTCACATTTGTAAATaGGTCACTCTGTCTTCCAAA	+
Preference number: 4 (lower is better) Translates to: FLEKRLEIINFWDSGWEQSHICK*VTLSSK Trigger: TTTGGAAGACAGAGTGACCCATTTACAAATGTGACT...TTGTTCCCAACCACTGTCCCAAAAATTGATGATCTCAAGTCTCTTTTCAAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS CCA 90 bp	GGGGTGGCCCGGGTGACAAGTGGTCCTGGGTGTATACAGCTTTTCTaGATGGCTCGTAGGGCACTCGCAGGATGCTGGGTGTCTCTTCCA	+
Preference number: 5 (lower is better) Translates to: GVARVTSGPGCIQLF*MARRALAGCWVSLP Trigger: TGGAAGAGACACCCAGCATCCTGCGAGTGCCCTACGAGCCATCCAGAAAAGCTGTATACACCCAGGACCACTTGTCACCCGGGCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CAA 90 bp	ATGACACTTGAAGTCCCAGAGGCAGGGCGGTGTGGCAACACTGTCAAGCTGAGCCTTCAGATCTTTAGCTaGGAGCACTGTGACCTGCAC	+
Preference number: 5 (lower is better) Translates to: MTLEVPEAGRCGNTVKLSLQIFS*EHCDLH Trigger: GTGCAGGTCACAGTGCTCCAAGCTAAAGATCTGAAG...GCTCAGCTTGACAGTGTTGCCACACCGCCCTGCCTCTGGGACTTCAAGTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CAA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGCGTCTGTGTGGAGACTaGAGACTTCCACTTTCTGGA	+
Preference number: 5 (lower is better) Translates to: LLRISTHIGAGSRMQEEWRLCGD*RLPLSG Trigger: TCCAGAAAGTGGAAGTCTCAAGTCTCCACACAGACG...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS CCA 90 bp	TGTGTTGGACCCACAGTGCTGGACTTCAGCTTCTCAGAAGATAAGTaGGACCCAGTTAAATCAGACATCGAATGGGCAGAAGAGAGCCGC	+
Preference number: 5 (lower is better) Translates to: CVGPTVLDFSFSEDK*DPVKSDIEWAEESR Trigger: GCGGCTCTCTTCTGCCCATTCGATGTCTGATTTAACTGGGTCCCACTTATCTTCTGAGAAGCTGAAGTCCAGCACTGTGGGTCCAACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	GGTTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCTCCGAAGGAGTTCTTaGTGCTTCACCAGCTCCTGC	+
Preference number: 5 (lower is better) Translates to: GSTWKIKQVCLWPSFYSALRRSS*CFTSSC Trigger: GCAGGAGCTGGTGAAGCACAAAGAACTCCTTCGGAG...GGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	TGTGTGACATCAATCCTCAAGGGTAGATGTGGGCTGCCTCATGCTGTATGTTGGGCATCGAAAGGATTGTaGTCCGGGATTTTCCTGAGG	+
Preference number: 5 (lower is better) Translates to: CVTSILKGRCGLPHAVCWASKGL*SGIFLR Trigger: CCTCAGGAAAATCCCGGACAACAATCCTTTCGATGC...CCAACATACAGCATGAGGCAGCCCACATCTACCCTTGAGGATTGATGTCACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS GCA 90 bp	CAGATCCACCATTGTTCAGCTTGTCAGGTCTCCTGCTATCTCTCTTaGCAGTCACTCTTTCAAAGAGGCTCACCTTCTCCCTTTTCTCTC	+
Preference number: 5 (lower is better) Translates to: QIHHCSACQVSCYLS*QSLFQRGSPSPFSL Trigger: GAGAGAAAAGGGAGAAGGTGAGCCTCTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGCTGAACAATGGTGGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS GCA 90 bp	CACATGGGCTATCAGATCCACCATTGTTCAGCTTGTCAGGTCTCCTaGTATCTCTCTTGCCAGTCACTCTTTCAAAGAGGCTCACCTTCT	+
Preference number: 5 (lower is better) Translates to: HMGYQIHHCSACQVS*YLSCQSLFQRGSPS Trigger: AGAAGGTGAGCCTCTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGCTGAACAATGGTGGATCTGATAGCCCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CCA 90 bp	GACTTGAGACTTCCACTTTCTGGAACAACTCCAAAGGAATCTATCTaGCGACTGAGAAGATGTGTTGGACCCACAGTGCTGGACTTCAGC	+
Preference number: 5 (lower is better) Translates to: DLRLPLSGTTPKESI*RLRRCVGPTVLDFS Trigger: GCTGAAGTCCAGCACTGTGGGTCCAACACATCTTCTCAGTCGCCAGATAGATTCCTTTGGAGTTGTTCCAGAAAGTGGAAGTCTCAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	TTGTTAAGAATAAGCACTCACATCGGGGCGGGAAGCAGGATGCAGGAGGAGTGGTCTTCCTTGGCAGTGTaGCAAATTTTTGGGGTAATG	+
Preference number: 5 (lower is better) Translates to: LLRISTHIGAGSRMQEEWSSLAV*QIFGVM Trigger: CATTACCCCAAAAATTTGCAACACTGCCAAGGAAGA...CCACTCCTCCTGCATCCTGCTTCCCGCCCCGATGTGAGTGCTTATTCTTAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS TCA 90 bp	GGTACCCAGCCGTGGCATCGAAAGGATTGTTGTCCGGGATTTTCCTaGGGTCTTCACTGCTTGTTGGATTCACATGAAAACTTGAAGATG	+
Preference number: 5 (lower is better) Translates to: GTQPWHRKDCCPGFS*GLHCLLDSHENLKM Trigger: CATCTTCAAGTTTTCATGTGAATCCAACAAGCAGTGAAGACCTCAGGAAAATCCCGGACAACAATCCTTTCGATGCCACGGCTGGGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	TTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCAGGTTGGAAACCACTTTaGGGCTTGCTCAGACAGCAT	+
Preference number: 5 (lower is better) Translates to: FHLEDKASVSLAFFLQCPGWKPL*GLLRQH Trigger: ATGCTGTCTGAGCAAGCCCAAAAGTGGTTTCCAACC...TGGGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CAA 90 bp	GGTTCCACTTGGAAGATAAAGCAAGTGTGTCTCTGGCCTTCTTTCTACAGTGCCCTATCAGATCCACCATaGTTCAGCTTGTCAGGTCTC	+
Preference number: 5 (lower is better) Translates to: GSTWKIKQVCLWPSFYSALSDPP*FSLSGL Trigger: GAGACCTGACAAGCTGAACAATGGTGGATCTGATAG...GGCACTGTAGAAAGAAGGCCAGAGACACACTTGCTTTATCTTCCAAGTGGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	AATTATGCCTCAGATAAATCTCACTGCCTACCAGACCTGGACAAAGCTTCACTTCTCCGAAGGAGTTCTTaGTGCTTCACCAGCTCCTGC	+
Preference number: 5 (lower is better) Translates to: NYASDKSHCLPDLDKASLLRRSS*CFTSSC Trigger: GCAGGAGCTGGTGAAGCACAAAGAACTCCTTCGGAG...AAGTGAAGCTTTGTCCAGGTCTGGTAGGCAGTGAGATTTATCTGAGGCATAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS GCA 90 bp	ATTGCCACCTGCCCTAAAAACTTATCCAGTCCCACCAGGGACCTGTaGATCACTATAAGAAAAAGAATGTATTTCTCCGGACTACCCTGC	+
Preference number: 5 (lower is better) Translates to: IATCPKNLSSPTRDL*ITIRKRMYFSGLPC Trigger: GCAGGGTAGTCCGGAGAAATACATTCTTTTTCTTATAGTGATGCACAGGTCCCTGGTGGGACTGGATAAGTTTTTAGGGCAGGTGGCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2
CDS CCA 90 bp	TTGGTTTGGATTTCATCTGCATTTCACCACTTGAAAACTCAGGATTaGCATCAGGCATGTGAGTGCTCGGAACGATGGCAGAGGACGTAT	+
Preference number: 5 (lower is better) Translates to: LVWISSAFHHLKTQD*HQACECSERWQRTY Trigger: ATACGTCCTCTGCCATCGTTCCGAGCACTCACATGCCTGATGCCAATCCTGAGTTTTCAAGTGGTGAAATGCAGATGAAATCCAAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	TGTGTGACATCAATCCTCAAGGGTAGATGTGGGCTGCCTCATGCTGTATGTTGGAAAGGTGATCTCGTCTaGTCCTTCATTGACAAGTCA	+
Preference number: 5 (lower is better) Translates to: CVTSILKGRCGLPHAVCWKGDLV*SFIDKS Trigger: TGACTTGTCAATGAAGGACAAGACGAGATCACCTTT...CCAACATACAGCATGAGGCAGCCCACATCTACCCTTGAGGATTGATGTCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS GCA 90 bp	CTTCTTTGTTTGTCCTCAAAGATGTCATTGAGATTGATTGCCACCTaGCCTAAAAACTTATCCAGTCCCACCAGGGACCTGTGCATCACT	+
Preference number: 5 (lower is better) Translates to: LLCLSSKMSLRLIAT*PKNLSSPTRDLCIT Trigger: AGTGATGCACAGGTCCCTGGTGGGACTGGATAAGTTTTTAGGGCAGGTGGCAATCAATCTCAATGACATCTTTGAGGACAAACAAAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2
CDS CCA 90 bp	CAACTGAATTATGGTGTATGTGTCATTGGTACCACTTTTGCCTTTTaGCTTCAGATCTTTAGCTTGGAGCACTGTGACCTGCACGTGGGT	+
Preference number: 5 (lower is better) Translates to: QLNYGVCVIGTTFAF*LQIFSLEHCDLHVG Trigger: ACCCACGTGCAGGTCACAGTGCTCCAAGCTAAAGATCTGAAGCCAAAAGGCAAAAGTGGTACCAATGACACATACACCATAATTCAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2
CDS-3UTR CAA 90 bp	GTTGTCTTTGCTCAGGATACACAGCAGAATAAACCACACTACCCTATCTCCTGCTCATTGGTACCACTTTaGCCTTTTGGCTTCAGATCT	+
Preference number: 5 (lower is better) Translates to: VVFAQDTQQNKPHYPISCSLVPL*PFGFRS Trigger: AGATCTGAAGCCAAAAGGCAAAAGTGGTACCAATGA...GCAGGAGATAGGGTAGTGTGGTTTATTCTGCTGTGTATCCTGAGCAAAGACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CAA 90 bp	ACCACACTACCCTATCTCCTGCTTATACTTTCCATAAACTCAAACACCAGGAGACTATCAGATCCACCATaGTTCAGCTTGTCAGGTCTC	+
Preference number: 5 (lower is better) Translates to: TTLPYLLLILSINSNTRRLSDPP*FSLSGL Trigger: GAGACCTGACAAGCTGAACAATGGTGGATCTGATAG...TCTCCTGGTGTTTGAGTTTATGGAAAGTATAAGCAGGAGATAGGGTAGTGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS CCA 90 bp	TGTCTTCCAAAAGAGTGTTCACCTTCATCCACAATGCTGCCAGGTTaGTTCAATTTAGAAGTATCAAAGCTTAGTGTTCGTCTGTGTGGA	+
Preference number: 5 (lower is better) Translates to: CLPKECSPSSTMLPG*FNLEVSKLSVRLCG Trigger: TCCACACAGACGAACACTAAGCTTTGATACTTCTAAATTGAACCAACCTGGCAGCATTGTGGATGAAGGTGAACACTCTTTTGGAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	CAGAACAGAGCAGCAAAAGGCAATGCTTCCAACACTTACCATGAGTGGGTTACAGTTTTCCTTCTTTGTTaGTCCTCAAAGATGTCATTG	+
Preference number: 5 (lower is better) Translates to: QNRAAKGNASNTYHEWVTVFLLC*SSKMSL Trigger: CAATGACATCTTTGAGGACAAACAAAGAAGGAAAAC...TGTAACCCACTCATGGTAAGTGTTGGAAGCATTGCCTTTTGCTGCTCTGTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CAA 90 bp	TTAGATGAGATTTATGGGAAACTTATTCTGAGGACAAAAGCAACAGACAGCTCAGCATCGAAAGGATTGTaGTCCGGGATTTTCCTGAGG	+
Preference number: 5 (lower is better) Translates to: LDEIYGKLILRTKATDSSASKGL*SGIFLR Trigger: CCTCAGGAAAATCCCGGACAACAATCCTTTCGATGC...TGAGCTGTCTGTTGCTTTTGTCCTCAGAATAAGTTTCCCATAAATCTCATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	ACAAATTCTAATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGCGTCTGTGTGGAGACTaGAGACTTCCACTTTCTGGA	+
Preference number: 5 (lower is better) Translates to: TNSNGGKTVPYDLLLIKRRLCGD*RLPLSG Trigger: TCCAGAAAGTGGAAGTCTCAAGTCTCCACACAGACG...CCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATTAGAATTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS GCA 90 bp	CAATTGGTTTTGAGAATAAATTCATGCTGCTGTCCCATGGCTCACTaGTTTCTTCAAATGGATTCTTCTTCCTTGGCAGTGTTGCAAATT	+
Preference number: 5 (lower is better) Translates to: QLVLRINSCCCPMAH*FLQMDSSSLAVLQI Trigger: AATTTGCAACACTGCCAAGGAAGAAGAATCCATTTGAAGAAAGCAGTGAGCCATGGGACAGCAGCATGAATTTATTCTCAAAACCAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	GAAACTCTTACCACTAGAACACAACATTTTCCAGAGTGTAAATGCAGACTTTTCTCCTCAAAGATGTCATaGAGATTGATTGCCACCTGC	+
Preference number: 5 (lower is better) Translates to: ETLTTRTQHFPECKCRLFSSKMS*RLIATC Trigger: GCAGGTGGCAATCAATCTCAATGACATCTTTGAGGA...GAAAAGTCTGCATTTACACTCTGGAAAATGTTGTGTTCTAGTGGTAAGAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CAA 90 bp	TGTTTTTATTTAGCAACAAGAATTATGCCTCAGATAAATCTCACTGCCTACCAGCTCCTGCTATCTCTCTaGCCAGTCACTCTTTCAAAG	+
Preference number: 5 (lower is better) Translates to: CFYLATRIMPQINLTAYQLLLSL*PVTLSK Trigger: CTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGAG...CTGGTAGGCAGTGAGATTTATCTGAGGCATAATTCTTGTTGCTAAATAAAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	ACAAATTCTAATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGCTCCTGCTATCTCTCTaGCCAGTCACTCTTTCAAAG	+
Preference number: 5 (lower is better) Translates to: TNSNGGKTVPYDLLLIKRLLLSL*PVTLSK Trigger: CTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGAG...CCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATTAGAATTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	TTAGATGAGATTTATGGGAAACTTATTCTGAGGACAAAAGCAACAGACAGCTCAAAGATGTCATTGAGATaGATTGCCACCTGCCCTAAA	+
Preference number: 5 (lower is better) Translates to: LDEIYGKLILRTKATDSSKMSLR*IATCPK Trigger: TTTAGGGCAGGTGGCAATCAATCTCAATGACATCTT...TGAGCTGTCTGTTGCTTTTGTCCTCAGAATAAGTTTCCCATAAATCTCATCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS-3UTR CAA 90 bp	TTAGATGAGATTTATGGGAAACTTATTCTGAGGACAAAAGCAACAGACAGCTCACACAATGCTGCCAGGTaGGTTCAATTTAGAAGTATC	+
Preference number: 5 (lower is better) Translates to: LDEIYGKLILRTKATDSSHNAAR*VQFRSI Trigger: GATACTTCTAAATTGAACCAACCTGGCAGCATTGTG...TGAGCTGTCTGTTGCTTTTGTCCTCAGAATAAGTTTCCCATAAATCTCATCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	ACAAATTCTAATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGAAAGGTGATCTCGTCTaGTCCTTCATTGACAAGTCA	+
Preference number: 5 (lower is better) Translates to: TNSNGGKTVPYDLLLIKRKGDLV*SFIDKS Trigger: TGACTTGTCAATGAAGGACAAGACGAGATCACCTTT...CCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATTAGAATTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	TGTTTTTATTTAGCAACAAGAATTATGCCTCAGATAAATCTCACTGCCTACCAGCACAATGCTGCCAGGTaGGTTCAATTTAGAAGTATC	+
Preference number: 5 (lower is better) Translates to: CFYLATRIMPQINLTAYQHNAAR*VQFRSI Trigger: GATACTTCTAAATTGAACCAACCTGGCAGCATTGTG...CTGGTAGGCAGTGAGATTTATCTGAGGCATAATTCTTGTTGCTAAATAAAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS-3UTR CAA 90 bp	ACAAATTCTAATGGAGGCAAAACTGTGCCTTATGACTTACTTCTCATAAAAAGGTCTTCCTTGGCAGTGTaGCAAATTTTTGGGGTAATG	+
Preference number: 5 (lower is better) Translates to: TNSNGGKTVPYDLLLIKRSSLAV*QIFGVM Trigger: CATTACCCCAAAAATTTGCAACACTGCCAAGGAAGA...CCTTTTTATGAGAAGTAAGTCATAAGGCACAGTTTTGCCTCCATTAGAATTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000171986.8
CDS CCA 72 bp	GCTTCTCCACAGAGGTGGGGTGGCCCGGGTGACAAGTaGTCCTGGGTGTATACAGCTTTTCTGGATGGCTCG	+
Preference number: 6 (lower is better) Translates to: ASPQRWGGPGDK*SWVYTAFLDGS Trigger: CGAGCCATCCAGAAAAGCTGTATACACCCAGGACCACTTGTCACCCGGGCCACCCCACCTCTGTGGAGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS CCA 72 bp	CGGGTGACAAGTGGTCCTGGGTGTATACAGCTTTTCTaGATGGCTCGTAGGGCACTCGCAGGATGCTGGGTG	+
Preference number: 6 (lower is better) Translates to: RVTSGPGCIQLF*MARRALAGCWV Trigger: CACCCAGCATCCTGCGAGTGCCCTACGAGCCATCCAGAAAAGCTGTATACACCCAGGACCACTTGTCACCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051996.13
CDS CCA 72 bp	CAGGATTGGCATCAGGCATGTGAGTGCTCGGAACGATaGCAGAGGACGTATCAGAAAACACCCCGTCGCTTT	+
Preference number: 6 (lower is better) Translates to: QDWHQACECSER*QRTYQKTPRRF Trigger: AAAGCGACGGGGTGTTTTCTGATACGTCCTCTGCCATCGTTCCGAGCACTCACATGCCTGATGCCAATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS TCA 72 bp	TCACCACTTGAAAACTCAGGATTGGCATCAGGCATGTaGGTGCTCGGAACGATGGCAGAGGACGTATCAGAA	+
Preference number: 6 (lower is better) Translates to: SPLENSGLASGM*VLGTMAEDVSE Trigger: TTCTGATACGTCCTCTGCCATCGTTCCGAGCACTCACATGCCTGATGCCAATCCTGAGTTTTCAAGTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS GCA 72 bp	TTTGGCTTCAGATCTTTAGCTTGGAGCACTGTGACCTaGACGTGGGTTGGAAACCACTTTTGGGCTTGCTCA	+
Preference number: 6 (lower is better) Translates to: FGFRSLAWSTVT*TWVGNHFWACS Trigger: TGAGCAAGCCCAAAAGTGGTTTCCAACCCACGTGCAGGTCACAGTGCTCCAAGCTAAAGATCTGAAGCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2
CDS GCA 72 bp	CATTGTTCAGCTTGTCAGGTCTCCTGCTATCTCTCTTaGCAGTCACTCTTTCAAAGAGGCTCACCTTCTCCC	+
Preference number: 6 (lower is better) Translates to: HCSACQVSCYLS*QSLFQRGSPSP Trigger: GGGAGAAGGTGAGCCTCTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGCTGAACAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CAA 72 bp	CCATTGTTCAGCTTGTCAGGTCTCCTGCTATCTCTCTaGCCAGTCACTCTTTCAAAGAGGCTCACCTTCTCC	+
Preference number: 6 (lower is better) Translates to: PLFSLSGLLLSL*PVTLSKRLTFS Trigger: GGAGAAGGTGAGCCTCTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGCTGAACAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS GCA 72 bp	ACTATAAGAAAAAGAATGTATTTCTCCGGACTACCCTaGATGAGCAACCCAGGCAGCTCAAAGGAGGCCTCC	+
Preference number: 6 (lower is better) Translates to: TIRKRMYFSGLP*MSNPGSSKEAS Trigger: GGAGGCCTCCTTTGAGCTGCCTGGGTTGCTCATGCAGGGTAGTCCGGAGAAATACATTCTTTTTCTTATAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2
CDS GCA 72 bp	CACTTGAAAACTCAGGATTGGCATCAGGCATGTGAGTaGTCGGAACGATGGCAGAGGACGTATCAGAAAACA	+
Preference number: 6 (lower is better) Translates to: HLKTQDWHQACE*SERWQRTYQKT Trigger: TGTTTTCTGATACGTCCTCTGCCATCGTTCCGAGCACTCACATGCCTGATGCCAATCCTGAGTTTTCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CCA 72 bp	TCCAAAGGAATCTATCTGGCGACTGAGAAGATGTGTTaGACCCACAGTGCTGGACTTCAGCTTCTCAGAAGA	+
Preference number: 6 (lower is better) Translates to: SKGIYLATEKMC*THSAGLQLLRR Trigger: TCTTCTGAGAAGCTGAAGTCCAGCACTGTGGGTCCAACACATCTTCTCAGTCGCCAGATAGATTCCTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CAA 72 bp	AAGTCACATGGGCTATCAGATCCACCATTGTTCAGCTaGTCAGGTCTCCTGCTATCTCTCTTGCCAGTCACT	+
Preference number: 6 (lower is better) Translates to: KSHGLSDPPLFS*SGLLLSLLPVT Trigger: AGTGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGCTGAACAATGGTGGATCTGATAGCCCATGTGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CAA 90 bp	TCAGATCCACCATTGTTCAGCTTGTCAGGTCTCCTGCTATCTCTCTaGCCAGTCACTCTTTCAAAGAGGCTCACCTTCTCCCTTTTCTCT	+
Preference number: 6 (lower is better) Translates to: SDPPLFSLSGLLLSL*PVTLSKRLTFSLFS Trigger: AGAGAAAAGGGAGAAGGTGAGCCTCTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGCTGAACAATGGTGGATCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CAA 90 bp	GGTGATTTCAAGTCACATGGGCTATCAGATCCACCATTGTTCAGCTaGTCAGGTCTCCTGCTATCTCTCTTGCCAGTCACTCTTTCAAAG	+
Preference number: 6 (lower is better) Translates to: GDFKSHGLSDPPLFS*SGLLLSLLPVTLSK Trigger: CTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGCTGAACAATGGTGGATCTGATAGCCCATGTGACTTGAAATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CAA 90 bp	AAAGCACTAGGTGATTTCAAGTCACATGGGCTATCAGATCCACCATaGTTCAGCTTGTCAGGTCTCCTGCTATCTCTCTTGCCAGTCACT	+
Preference number: 6 (lower is better) Translates to: KALGDFKSHGLSDPP*FSLSGLLLSLLPVT Trigger: AGTGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGCTGAACAATGGTGGATCTGATAGCCCATGTGACTTGAAATCACCTAGTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS TCA 72 bp	TTTCTGGAACAACTCCAAAGGAATCTATCTGGCGACTaGGAAGATGTGTTGGACCCACAGTGCTGGACTTCA	+
Preference number: 6 (lower is better) Translates to: FLEQLQRNLSGD*EDVLDPQCWTS Trigger: TGAAGTCCAGCACTGTGGGTCCAACACATCTTCTCAGTCGCCAGATAGATTCCTTTGGAGTTGTTCCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS TCA 72 bp	CCGTGGCATCGAAAGGATTGTTGTCCGGGATTTTCCTaGGGTCTTCACTGCTTGTTGGATTCACATGAAAAC	+
Preference number: 6 (lower is better) Translates to: PWHRKDCCPGFS*GLHCLLDSHEN Trigger: GTTTTCATGTGAATCCAACAAGCAGTGAAGACCTCAGGAAAATCCCGGACAACAATCCTTTCGATGCCACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS GCA 72 bp	TATCAGATCCACCATTGTTCAGCTTGTCAGGTCTCCTaGTATCTCTCTTGCCAGTCACTCTTTCAAAGAGGC	+
Preference number: 6 (lower is better) Translates to: YQIHHCSACQVS*YLSCQSLFQRG Trigger: GCCTCTTTGAAAGAGTGACTGGCAAGAGAGATAGCAGGAGACCTGACAAGCTGAACAATGGTGGATCTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CCA 72 bp	ATTTCATCTGCATTTCACCACTTGAAAACTCAGGATTaGCATCAGGCATGTGAGTGCTCGGAACGATGGCAG	+
Preference number: 6 (lower is better) Translates to: ISSAFHHLKTQD*HQACECSERWQ Trigger: CTGCCATCGTTCCGAGCACTCACATGCCTGATGCCAATCCTGAGTTTTCAAGTGGTGAAATGCAGATGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CAA 72 bp	GGTGATTTCAAGTCACATGGGCTATCAGATCCACCATaGTTCAGCTTGTCAGGTCTCCTGCTATCTCTCTTG	+
Preference number: 6 (lower is better) Translates to: GDFKSHGLSDPP*FSLSGLLLSLL Trigger: CAAGAGAGATAGCAGGAGACCTGACAAGCTGAACAATGGTGGATCTGATAGCCCATGTGACTTGAAATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CAA 90 bp	CACTCTGTTTTCCTTCTTTGTTTGTCCTCAAAGATGTCATTGAGATaGATTGCCACCTGCCCTAAAAACTTATCCAGTCCCACCAGGGAC	+
Preference number: 6 (lower is better) Translates to: HSVFLLCLSSKMSLR*IATCPKNLSSPTRD Trigger: GTCCCTGGTGGGACTGGATAAGTTTTTAGGGCAGGTGGCAATCAATCTCAATGACATCTTTGAGGACAAACAAAGAAGGAAAACAGAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2
CDS GCA 72 bp	TTGAGAATAAATTCATGCTGCTGTCCCATGGCTCACTaGTTTCTTCAAATGGATTCTTCTTCCTTGGCAGTG	+
Preference number: 6 (lower is better) Translates to: LRINSCCCPMAH*FLQMDSSSLAV Trigger: CACTGCCAAGGAAGAAGAATCCATTTGAAGAAAGCAGTGAGCCATGGGACAGCAGCATGAATTTATTCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS CAA 90 bp	CTAAACCACTCTGTTTTCCTTCTTTGTTTGTCCTCAAAGATGTCATaGAGATTGATTGCCACCTGCCCTAAAAACTTATCCAGTCCCACC	+
Preference number: 6 (lower is better) Translates to: LNHSVFLLCLSSKMS*RLIATCPKNLSSPT Trigger: GGTGGGACTGGATAAGTTTTTAGGGCAGGTGGCAATCAATCTCAATGACATCTTTGAGGACAAACAAAGAAGGAAAACAGAGTGGTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2
CDS CAA 72 bp	TTCCTTCTTTGTTTGTCCTCAAAGATGTCATTGAGATaGATTGCCACCTGCCCTAAAAACTTATCCAGTCCC	+
Preference number: 6 (lower is better) Translates to: FLLCLSSKMSLR*IATCPKNLSSP Trigger: GGGACTGGATAAGTTTTTAGGGCAGGTGGCAATCAATCTCAATGACATCTTTGAGGACAAACAAAGAAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2
CDS CCA 72 bp	AAAGAGTGTTCACCTTCATCCACAATGCTGCCAGGTTaGTTCAATTTAGAAGTATCAAAGCTTAGTGTTCGT	+
Preference number: 6 (lower is better) Translates to: KECSPSSTMLPG*FNLEVSKLSVR Trigger: ACGAACACTAAGCTTTGATACTTCTAAATTGAACCAACCTGGCAGCATTGTGGATGAAGGTGAACACTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2 ENSMUST00000171986.8
CDS TCA 72 bp	TCTGCTACAGATGTAGAATACTTCTCTTTGCCCAACTaGATTATGGTGTATGTGTCATTGGTACCACTTTTG	+
Preference number: 6 (lower is better) Translates to: SATDVEYFSLPN*IMVYVSLVPLL Trigger: CAAAAGTGGTACCAATGACACATACACCATAATTCAGTTGGGCAAAGAGAAGTATTCTACATCTGTAGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051996.13 ENSMUST00000170819.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu