Pregenerated sensors for RAB11FIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031488Ensembl transcript IDs: ENSMUST00000033878.14, ENSMUST00000054212.7, ENSMUST00000209377.2
Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCCTCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTaGGCCGGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTG | + |
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Preference number: 1 (lower is better) Translates to: RLLPAVYIFPAFLPI*AGTRRMLGVSSMTL Trigger: CAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGAGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| 3UTR GCA 90 bp | TCAGACCACGCCTCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTaGCCATCTGCGCCGGCACTCGGAGGATGTTGGGGGTCTCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SDHASFPQFTSFRPS*PSAPALGGCWGSPP Trigger: TGGAGGAGACCCCCAACATCCTCCGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGAGGCGTGGTCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| 3UTR GCA 90 bp | GAGGTCAGCCTCAGTAGCTCCAGGGCTCTCCCTGTCACCAGCCTCTaGCAGTGGCTCAATGCAGGTTCGGCTTCCCTTGGTTGGTATCAC | + |
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Preference number: 1 (lower is better) Translates to: EVSLSSSRALPVTSL*QWLNAGSASLGWYH Trigger: GTGATACCAACCAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAGCCCTGGAGCTACTGAGGCTGACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR GCA 90 bp | AGCCTCGATACAGTGCACGGTGAAGCGTCATGGACCAGCCTCTCTTaGTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTTGCTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SLDTVHGEASWTSLS*WTAVEHGTGQGCLL Trigger: GAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGGCTGGTCCATGACGCTTCACCGTGCACTGTATCGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CCA 90 bp | TGCACGGTGAAGCGTCATGGACCAGCCTCTCTTGCTGGACAGCAGTaGAGCATGGCACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: CTVKRHGPASLAGQQ*SMAQGRVACSFFLW Trigger: CCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGGCTGGTCCATGACGCTTCACCGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CCA 90 bp | GGGATGGAGAACTCTAGCCTCGATACAGTGCACGGTGAAGCGTCATaGACCAGCCTCTCTTGCTGGACAGCAGTGGAGCATGGCACAGGG | + |
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Preference number: 1 (lower is better) Translates to: GMENSSLDTVHGEAS*TSLSCWTAVEHGTG Trigger: CCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGGCTGGTCCATGACGCTTCACCGTGCACTGTATCGAGGCTAGAGTTCTCCATCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR TCA 90 bp | CGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTaGGCCTGCCTTCACGGAGGATCCATACCGGAAGATCTCAGCATC | + |
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Preference number: 1 (lower is better) Translates to: RVKQHTSQSPFLISP*ACLHGGSIPEDLSI Trigger: GATGCTGAGATCTTCCGGTATGGATCCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| 3UTR GCA 90 bp | AGCCTCTCTTGCTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTTaGTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SLSCWTAVEHGTGQG*LLLLSVAQVKVIWW Trigger: CCACCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CCA 90 bp | CTGGTATTTAATCCAACGCCTTCATACCCCACCCAAATCTCTGGCTaGGCTTTCTTGGAGGTAGCCAGGCATGGGCAAGGAAAGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LVFNPTPSYPTQISG*AFLEVARHGQGKGS Trigger: AGAGCCCTTTCCTTGCCCATGCCTGGCTACCTCCAAGAAAGCCCAGCCAGAGATTTGGGTGGGGTATGAAGGCGTTGGATTAAATACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR GCA 90 bp | CCTTGTGAGGTACAGCAACGTCAGAAAGGCAGTGTTTCCCAGCACTaGAGAAACCAGCAAAGCCCCCGAAGTAAACTGTCCTTCATTCTC | + |
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Preference number: 1 (lower is better) Translates to: PCEVQQRQKGSVSQH*RNQQSPRSKLSFIL Trigger: GAGAATGAAGGACAGTTTACTTCGGGGGCTTTGCTGGTTTCTGCAGTGCTGGGAAACACTGCCTTTCTGACGTTGCTGTACCTCACAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CCA 90 bp | CAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATaGTGGAATAAAACAGGGAAGCCAGGCCAAGTGCCGAAGCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: QGCLLLLSVAQVKVI*WNKTGKPGQVPKPK Trigger: CTTTGGCTTCGGCACTTGGCCTGGCTTCCCTGTTTTATTCCACCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR GCA 90 bp | AGGGTATCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTTCGGAACATCAGACAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RVSDLITDGCEPPCG*WDLNSGPSEHQTVL Trigger: GAGCACTGTCTGATGTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGATACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CCA 90 bp | TCTGACTTAAACCTCCCTATGCTGCTGAGAATGCAATTGAACTGTTaGTCACCCGATTTCACCTCCCTGGTGCTGGCTGGGATTACAGAT | + |
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Preference number: 1 (lower is better) Translates to: SDLNLPMLLRMQLNC*SPDFTSLVLAGITD Trigger: ATCTGTAATCCCAGCCAGCACCAGGGAGGTGAAATCGGGTGACCAACAGTTCAATTGCATTCTCAGCAGCATAGGGAGGTTTAAGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CCA 90 bp | GGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGTaGAATAAAACAGGGAAGCCAGGCCAAGTGCCGAAGCCAAAGATA | + |
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Preference number: 1 (lower is better) Translates to: GCLLLLSVAQVKVIW*NKTGKPGQVPKPKI Trigger: TATCTTTGGCTTCGGCACTTGGCCTGGCTTCCCTGTTTTATTCCACCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR TCA 90 bp | ATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCAGATTCCCTTaGACAGAAATTACAGACAGTTGTGAGCTACCATGTGGTTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: IFCLHGCPGDTVRFP*TEITDSCELPCGCW Trigger: CCAGCAACCACATGGTAGCTCACAACTGTCTGTAATTTCTGTTCAAGGGAATCTGACCGTGTCACCCGGACATCCATGCAGACAAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| 3UTR TCA 90 bp | CCCTATAGATCTAAAGAGCAGTGTGTGTGTGTGTGTGTGACCACATaGAGGGCAGAGGTCTATGGTAGCTTTTCATTTTATTGTTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: PYRSKEQCVCVCVTT*RAEVYGSFSFYCLR Trigger: TCTTAAACAATAAAATGAAAAGCTACCATAGACCTCTGCCCTTCATGTGGTCACACACACACACACACACTGCTCTTTAGATCTATAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| 3UTR CAA 90 bp | TTCAGACCACGCCTCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTaGCCCATCTGCGCCGGCACTCGGAGGATGTTGGGGGTCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: FRPRLLPAVYIFPAF*PICAGTRRMLGVSS Trigger: GGAGGAGACCCCCAACATCCTCCGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGAGGCGTGGTCTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| 3UTR-3UTR GCA 90 bp | CACAAGGCAGAGGTCAGCCTCAGTAGCTCCAGGGCTCTCCCTGTCACCAGCCTCCACTTACCCAGCCCCTaGCTGAGCCTCCTTCATCTT | + |
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Preference number: 2 (lower is better) Translates to: HKAEVSLSSSRALPVTSLHLPSP*LSLLHL Trigger: AAGATGAAGGAGGCTCAGGCAGGGGCTGGGTAAGTG...GAGGCTGGTGACAGGGAGAGCCCTGGAGCTACTGAGGCTGACCTCTGCCTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR TCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGTCCAGCTCCCGCACCTaGAACTCCTTCTTGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSSSSRT*NSFLLM Trigger: CATCAGCAAGAAGGAGTTTCAGGTGCGGGAGCTGGA...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAACTGTTCCTTACCGCTGCCCCTGAGATCTGCCTaGCTCTGCCCTCCCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: QQRSRCHPVALHNCSLPLPLRSA*LCPPPA Trigger: GGCTGGGGGAGGGCAGAGCCAGGCAGATCTCAGGGG...CAGCGGTAAGGAACAGTTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGTTAACTCTTGAGAGATaGTGCACACAGCAGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSLTLER*CTQQAF Trigger: GAAGGCCTGCTGTGTGCATCATCTCTCAAGAGTTAA...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCTGGTCTCCTTCTGTTTaGGGACTAGCTGGATCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SFPQFTSFRPSCPSAPALWSPSV*GLAGSA Trigger: AGCTGATCCAGCTAGTCCTCAAACAGAAGGAGACCA...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| 3UTR CAA 90 bp | CAGCCTCTCTTGCTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTaGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGTG | + |
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Preference number: 2 (lower is better) Translates to: QPLLLDSSGAWHRAG*LAPSFCGPSKGNMV Trigger: CACCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGCACAGGAATTCACTTCACCTAGACGGTCCTCGCTAGAGCTGACTCGGTTTCTCATCTCACCCTaGGCCTGCCTTCACGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: FRAQEFTSPRRSSLELTRFLISP*ACLHGG Trigger: TCCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAA...CCGAGTCAGCTCTAGCGAGGACCGTCTAGGTGAAGTGAATTCCTGTGCTCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CAA 90 bp | AATCCAACGCCTTCATACCCCACCCAAATCTCTGGCTGGGCTTTCTaGGAGGTAGCCAGGCATGGGCAAGGAAAGGGCTCTTTCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: NPTPSYPTQISGWAF*EVARHGQGKGSFFL Trigger: AAGAAAGAAAGAGCCCTTTCCTTGCCCATGCCTGGCTACCTCCAAGAAAGCCCAGCCAGAGATTTGGGTGGGGTATGAAGGCGTTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CAA 90 bp | CTCTCTTGCTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTTGCTaGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LSCWTAVEHGTGQGC*LLLSVAQVKVIWWN Trigger: ATTCCACCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR GCA 90 bp | CCAAATCAGGAGGTAGCAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAAGTGCCTCAACCGAGGTaGTCAAAGGCCAAGAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: PNQEVAAKKQMPSCSSSQVPQPR*SKAKRA Trigger: CGCTCTCTTGGCCTTTGAGCACCTCGGTTGAGGCAC...TTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTGCTACCTCCTGATTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCCTGTCACCAGCCTCTGCCAGTGGCTCAATGCAGGTTCGGCTTCCCTTGACCAAAACCCCAGGATaGAGAACAGAAATATACATG | + |
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Preference number: 2 (lower is better) Translates to: LSLSPASASGSMQVRLPLTKTPG*RTEIYM Trigger: CATGTATATTTCTGTTCTGCATCCTGGGGTTTTGGT...CAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR TCA 90 bp | ATAGCCCTCTTTAGACACACCAGAAGAGGGCACTGCATTCCATTACAGATGGTTACCTGGAGTTTCCAGTaGGCCCCTGAGATCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: IALFRHTRRGHCIPLQMVTWSFQ*APEICL Trigger: CAGGCAGATCTCAGGGGCTCACTGGAAACTCCAGGT...AACCATCTGTAATGGAATGCAGTGCCCTCTTCTGGTGTGTCTAAAGAGGGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAAGCACCTTACCCACTGAGCTATATCCCCCAATCCATGGAGAACATATTTTTCTCATCTCACCCTaGGCCTGCCTTCACGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SASTLPTELYPPIHGEHIFLISP*ACLHGG Trigger: TCCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAA...AATATGTTCTCCATGGATTGGGGGATATAGCTCAGTGGGTAAGGTGCTTGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCCTCTTTAGACACACCAGAAGAGGGCACTGCATTCCATTACAGATGGTTGCCTCTTCTGAGCAGTaGTCCAGTGCACTTAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: IALFRHTRRGHCIPLQMVASSEQ*SSALRL Trigger: TAACCTAAGTGCACTGGAGCACTGCTCAGAAGAGGC...AACCATCTGTAATGGAATGCAGTGCCCTCTTCTGGTGTGTCTAAAGAGGGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAAGCACCTTACCCACTGAGCTATATCCCCCAATCCATGGAGAACATATTTTAACTCTTGAGAGATaGTGCACACAGCAGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SASTLPTELYPPIHGEHILTLER*CTQQAF Trigger: GAAGGCCTGCTGTGTGCATCATCTCTCAAGAGTTAA...AATATGTTCTCCATGGATTGGGGGATATAGCTCAGTGGGTAAGGTGCTTGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAACTGTTCCTTACCGCTGATCTTGAGAAATCAGTaGACTGTCTACTCCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QQRSRCHPVALHNCSLPLILRNQ*TVYSLP Trigger: TGGAAGGGAGTAGACAGTCCACTGATTTCTCAAGAT...CAGCGGTAAGGAACAGTTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR TCA 90 bp | ACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAAAAATTGAGTTAACTCTTGAGAGATaGTGCACACAGCAGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: TLTKTTLESSGLPELKIELTLER*CTQQAF Trigger: GAAGGCCTGCTGTGTGCATCATCTCTCAAGAGTTAA...CTCAATTTTTAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGAGGATAATGAGTTCAAGGTCATTAATAGCCATAAAATCAAGATTAACCCCCACCCAAATCTCTaGCTGGGCTTTCTTGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: RQEDNEFKVINSHKIKINPHPNL*LGFLGG Trigger: ACCTCCAAGAAAGCCCAGCCAGAGATTTGGGTGGGG...GTTAATCTTGATTTTATGGCTATTAATGACCTTGAACTCATTATCCTCCTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGAGGATAATGAGTTCAAGGTCATTAATAGCCATAAAATCAAGATTAACGTAAAGGTAATATGGTaGAATAAAACAGGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RQEDNEFKVINSHKIKINVKVIW*NKTGKP Trigger: TGGCTTCCCTGTTTTATTCCACCATATTACCTTTAC...GTTAATCTTGATTTTATGGCTATTAATGACCTTGAACTCATTATCCTCCTGCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR GCA 72 bp | CCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTaGGCCGGCACTCGGAGGATGTTGGGGGTCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: PAVYIFPAFLPI*AGTRRMLGVSS Trigger: GGAGGAGACCCCCAACATCCTCCGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| 3UTR GCA 72 bp | GCCTCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTaGCCATCTGCGCCGGCACTCGGAGGATGTTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: ASFPQFTSFRPS*PSAPALGGCWG Trigger: CCCCCAACATCCTCCGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| 3UTR CCA 72 bp | GTGCACGGTGAAGCGTCATGGACCAGCCTCTCTTGCTaGACAGCAGTGGAGCATGGCACAGGGCAGGGTTGC | + |
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Preference number: 3 (lower is better) Translates to: VHGEASWTSLSC*TAVEHGTGQGC Trigger: GCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGGCTGGTCCATGACGCTTCACCGTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR GCA 72 bp | CTCAGTAGCTCCAGGGCTCTCCCTGTCACCAGCCTCTaGCAGTGGCTCAATGCAGGTTCGGCTTCCCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LSSSRALPVTSL*QWLNAGSASLG Trigger: ACCAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAGCCCTGGAGCTACTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR GCA 72 bp | ACAGTGCACGGTGAAGCGTCATGGACCAGCCTCTCTTaGTGGACAGCAGTGGAGCATGGCACAGGGCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: TVHGEASWTSLS*WTAVEHGTGQG Trigger: ACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGGCTGGTCCATGACGCTTCACCGTGCACTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CCA 72 bp | AGCTCCAGGGCTCTCCCTGTCACCAGCCTCTGCCAGTaGCTCAATGCAGGTTCGGCTTCCCTTGGTTGGTAT | + |
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Preference number: 3 (lower is better) Translates to: SSRALPVTSLCQ*LNAGSASLGWY Trigger: ATACCAACCAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAGCCCTGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CCA 72 bp | AAGCGTCATGGACCAGCCTCTCTTGCTGGACAGCAGTaGAGCATGGCACAGGGCAGGGTTGCTTGCTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: KRHGPASLAGQQ*SMAQGRVACSF Trigger: GAAGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGGCTGGTCCATGACGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR GCA 72 bp | GGCTCTCCCTGTCACCAGCCTCTGCCAGTGGCTCAATaGAGGTTCGGCTTCCCTTGGTTGGTATCACTCCTT | + |
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Preference number: 3 (lower is better) Translates to: GSPCHQPLPVAQ*RFGFPWLVSLL Trigger: AAGGAGTGATACCAACCAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CCA 72 bp | TGTAGGCCCCTCCAGGGCACCTCAAGTTGGCATCAGTaGAAGCTACAAGCACAAGGCAGAGGTCAGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: CRPLQGTSSWHQ*KLQAQGRGQPQ Trigger: CTGAGGCTGACCTCTGCCTTGTGCTTGTAGCTTCCACTGATGCCAACTTGAGGTGCCCTGGAGGGGCCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR-3UTR CAA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGATGGTCTCCTTCTGTTaGAGGACTAGCTGGATCAGC | + |
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Preference number: 3 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSMVSFC*RTSWIS Trigger: GCTGATCCAGCTAGTCCTCAAACAGAAGGAGACCAT...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| 3UTR TCA 72 bp | GCCATCTCTCCAGCCCCAGTCAGAGCTCTTAACCACTaGGCCATCTCTCCAGCCCGGGTTCATGCTTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: AISPAPVRALNH*AISPARVHASY Trigger: ATAAGAAGCATGAACCCGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCTCTGACTGGGGCTGGAGAGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR CCA 72 bp | AATCCAACGCCTTCATACCCCACCCAAATCTCTGGCTaGGCTTTCTTGGAGGTAGCCAGGCATGGGCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NPTPSYPTQISG*AFLEVARHGQG Trigger: TCCTTGCCCATGCCTGGCTACCTCCAAGAAAGCCCAGCCAGAGATTTGGGTGGGGTATGAAGGCGTTGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR TCA 72 bp | GCCTCAACCGAGGTGCTCAAAGGCCAAGAGAGCGGGTaGAACAGCACACATCCCAAAGTCCCTTTCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: ASTEVLKGQESG*NSTHPKVPFSS Trigger: AGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGCTCTCTTGGCCTTTGAGCACCTCGGTTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR TCA 72 bp | CCCAAGTCCTCTGGACCTGGTCCACTGTTCAGCCAGTaGGTGCTCTTAACCACTAGACTATCACTCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PKSSGPGPLFSQ*VLLTTRLSLQP Trigger: AGGCTGGAGTGATAGTCTAGTGGTTAAGAGCACTCACTGGCTGAACAGTGGACCAGGTCCAGAGGACTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR TCA 72 bp | GCACTTACCCAGCCCCTGCCTGAGCCTCCTTCATCTTaGGAAATCAGTGGACTGTCTACTCCCTTCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ALTQPLPEPPSS*EISGLSTPFQE Trigger: TTCCTGGAAGGGAGTAGACAGTCCACTGATTTCTCAAGATGAAGGAGGCTCAGGCAGGGGCTGGGTAAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR CCA 72 bp | AACCTCCCTATGCTGCTGAGAATGCAATTGAACTGTTaGTCACCCGATTTCACCTCCCTGGTGCTGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: NLPMLLRMQLNC*SPDFTSLVLAG Trigger: CCCAGCCAGCACCAGGGAGGTGAAATCGGGTGACCAACAGTTCAATTGCATTCTCAGCAGCATAGGGAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR TCA 72 bp | CAGATGGTTGTGAGTCCCCATGTGGTTGCCAGGAATTaGACTCTAGACCTCTGGACGAGCAGTCAGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSPHVVARN*TLDLWTSSQLS Trigger: AGAGAGCTGACTGCTCGTCCAGAGGTCTAGAGTTCAATTCCTGGCAACCACATGGGGACTCACAACCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR GCA 72 bp | GTACAGCAACGTCAGAAAGGCAGTGTTTCCCAGCACTaGAGAAACCAGCAAAGCCCCCGAAGTAAACTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VQQRQKGSVSQH*RNQQSPRSKLS Trigger: GGACAGTTTACTTCGGGGGCTTTGCTGGTTTCTGCAGTGCTGGGAAACACTGCCTTTCTGACGTTGCTGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR TCA 72 bp | GGGAAGCCAGGCCAAGTGCCGAAGCCAAAGATAAGATaGTATGAAACGATTAGGCCAAGGGCTGGCTGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GKPGQVPKPKIR*YETIRPRAGWF Trigger: AAACCAGCCAGCCCTTGGCCTAATCGTTTCATATCATCTTATCTTTGGCTTCGGCACTTGGCCTGGCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGCACACAGATTCTTCATaGAGAACCACCGCTACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TGQGCLLLLSVAQVKVIWHTDSS*RTTATP Trigger: TGGGGTAGCGGTGGTTCTCAATGAAGAATCTGTGTG...CCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR CCA 72 bp | GAAATTACAGACAGTTGTGAGCTACCATGTGGTTGCTaGGAATTGAACCCAAGTCCTCTGGACCTGGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EITDSCELPCGC*ELNPSPLDLVH Trigger: GTGGACCAGGTCCAGAGGACTTGGGTTCAATTCCCAGCAACCACATGGTAGCTCACAACTGTCTGTAATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR TCA 72 bp | TCTGGTTTTCAGCTAGGAGAATTAACTCTTGAGAGATaGTGCACACAGCAGGCCTTCGGAACCGGTGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SGFQLGELTLER*CTQQAFGTGVL Trigger: TAGCACACCGGTTCCGAAGGCCTGCTGTGTGCATCATCTCTCAAGAGTTAATTCTCCTAGCTGAAAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| 3UTR TCA 72 bp | CTGCATGGATGTCCGGGTGACACGGTCAGATTCCCTTaGACAGAAATTACAGACAGTTGTGAGCTACCATGT | + |
|
Preference number: 3 (lower is better) Translates to: LHGCPGDTVRFP*TEITDSCELPC Trigger: ACATGGTAGCTCACAACTGTCTGTAATTTCTGTTCAAGGGAATCTGACCGTGTCACCCGGACATCCATGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR TCA 72 bp | CCAGAAGAGGGTATCAGATCTCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PEEGIRSHYRWL*ATMWLLGFELR Trigger: CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGATACCCTCTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR TCA 72 bp | ACATTGCTCAGTTTACAGTCCTGGGGCTGGAGTGTGTaGTCAAGCCTAGTGCTTTGCACATGTAAGGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TLLSLQSWGWSV*SSLVLCTCKAN Trigger: GTTTGCCTTACATGTGCAAAGCACTAGGCTTGATCACACACTCCAGCCCCAGGACTGTAAACTGAGCAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR GCA 72 bp | CATATAGCCCTCTTTAGACACACCAGAAGAGGGCACTaGATTCCATTACAGATGGTTGTGAGTCCCCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: HIALFRHTRRGH*IPLQMVVSPHV Trigger: CACATGGGGACTCACAACCATCTGTAATGGAATGCAGTGCCCTCTTCTGGTGTGTCTAAAGAGGGCTATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR CCA 72 bp | CTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGTaGAATAAAACAGGGAAGCCAGGCCAAGTGCCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLLSVAQVKVIW*NKTGKPGQVPK Trigger: CTTCGGCACTTGGCCTGGCTTCCCTGTTTTATTCCACCATATTACCTTTACTTGGGCCACAGAAAGAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR CCA 72 bp | TTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATaGTGGAATAAAACAGGGAAGCCAGGCCAAGTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LLLLSVAQVKVI*WNKTGKPGQVP Trigger: CGGCACTTGGCCTGGCTTCCCTGTTTTATTCCACCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR CCA 72 bp | CTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTCGGAACATCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LITDGCEPPCGC*DLNSGPSEHQT Trigger: TGTCTGATGTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCAAGCACCTTACCCACTGAGCTATATCCCCCAATCCATGGAGAACATATTAAAGGCACAGTGGCATaGAAAAACAAAACGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SASTLPTELYPPIHGEHIKGTVA*KNKTLG Trigger: TCCCAGCGTTTTGTTTTTCAATGCCACTGTGCCTTT...AATATGTTCTCCATGGATTGGGGGATATAGCTCAGTGGGTAAGGTGCTTGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR-3UTR CAA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCTGTGGTTGCTGGGAATaGAACCCAAGTCCTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVCGCWE*NPSPLD Trigger: GTCCAGAGGACTTGGGTTCAATTCCCAGCAACCACA...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR TCA 72 bp | TCATTAATCTGGTTTTCAGCTAGGAGAATTAACTCTTaGGAGATGATGCACACAGCAGGCCTTCGGAACCGG | + |
|
Preference number: 3 (lower is better) Translates to: SLIWFSARRINS*EMMHTAGLRNR Trigger: CCGGTTCCGAAGGCCTGCTGTGTGCATCATCTCTCAAGAGTTAATTCTCCTAGCTGAAAACCAGATTAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| 3UTR TCA 72 bp | CCTATAGATCTAAAGAGCAGTGTGTGTGTGTGTGTGTaGCCACATGAAGGGCAGAGGTCTATGGTAGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PIDLKSSVCVCV*PHEGQRSMVAF Trigger: AAAAGCTACCATAGACCTCTGCCCTTCATGTGGTCACACACACACACACACACTGCTCTTTAGATCTATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR-3UTR CAA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCAAAGGCACAGTGGCATaGAAAAACAAAACGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVKGTVA*KNKTLG Trigger: TCCCAGCGTTTTGTTTTTCAATGCCACTGTGCCTTT...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGGAGGATAATGAGTTCAAGGTCATTAATAGCCATAAAATCAAGATTAACTGTGGTTGCTGGGAATaGAACCCAAGTCCTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RQEDNEFKVINSHKIKINCGCWE*NPSPLD Trigger: GTCCAGAGGACTTGGGTTCAATTCCCAGCAACCACA...GTTAATCTTGATTTTATGGCTATTAATGACCTTGAACTCATTATCCTCCTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGGAGGATAATGAGTTCAAGGTCATTAATAGCCATAAAATCAAGATTAACCACGGTCAGATTCCCTaGAACAGAAATTACAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: RQEDNEFKVINSHKIKINHGQIP*NRNYRQ Trigger: CTGTCTGTAATTTCTGTTCAAGGGAATCTGACCGTG...GTTAATCTTGATTTTATGGCTATTAATGACCTTGAACTCATTATCCTCCTGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGGAGGATAATGAGTTCAAGGTCATTAATAGCCATAAAATCAAGATTAACATGTGTATTGATATTTaGTCTGCATGGATGTCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: RQEDNEFKVINSHKIKINMCIDI*SAWMSG Trigger: CCCGGACATCCATGCAGACAAAATATCAATACACAT...GTTAATCTTGATTTTATGGCTATTAATGACCTTGAACTCATTATCCTCCTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCGCGGTGCAGGACGGTaGGCTGCAGGGTGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSRGAGR*AAGWRR Trigger: CCGCCGCCACCCTGCAGCTCACCGTCCTGCACCGCG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGTGCAGGACGGTGAGCTaGAGGGTGGCGGCGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSCRTVS*RVAAAA Trigger: GGCCGCCGCCGCCACCCTGCAGCTCACCGTCCTGCA...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | CACAAGGCAGAGGTCAGCCTCAGTAGCTCCAGGGCTCTCCCTGTCACCAGCCTCCCGAGCAACGCGCGGTaGAGGACGGTGAGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKAEVSLSSSRALPVTSLPSNAR*RTVSCR Trigger: CCTGCAGCTCACCGTCCTGCACCGCGCGTTGCTCGG...GAGGCTGGTGACAGGGAGAGCCCTGGAGCTACTGAGGCTGACCTCTGCCTTGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCCGGCCCTGGTCCCGGTaGAGCTCCCGCAGGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALRPWSR*SSRRST Trigger: GGTGGACCTGCGGGAGCTGCACCGGGACCAGGGCCG...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGTGCAGGACGGTGAGCTaGAGGGTGGCGGCGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRCRTVS*RVAAAA Trigger: GGCCGCCGCCGCCACCCTGCAGCTCACCGTCCTGCA...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGCGGCCCTGGTCCCGGTaGAGCTCCCGCAGGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRRPWSR*SSRRST Trigger: GGTGGACCTGCGGGAGCTGCACCGGGACCAGGGCCG...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTTGCTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTTGCTTGCTCCTGCCGCCTCCTTCCCCTaGTTCCTTGGGAGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLLDSSGAWHRAGLLAPAASFP*FLGRAG Trigger: GCCCGCTCTCCCAAGGAACCAGGGGAAGGAGGCGGC...AGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCTGTCACCAGCCTCTGCCAGTGGCTCAATGCAGGTTCGGCTTCCCTTGCCTCACCCTGGCCTGTaGGCCAGGGCTCGACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSPASASGSMQVRLPLPHPGL*ARARLE Trigger: CTCCAGTCGAGCCCTGGCCCACAGGCCAGGGTGAGG...CAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCCCGAGCAACGCGCGGTaGAGGACGGTGAGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALPSNAR*RTVSCR Trigger: CCTGCAGCTCACCGTCCTGCACCGCGCGTTGCTCGG...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCGGCCCTGGTCCCGGTaGAGCTCCCGCAGGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLRPWSR*SSRRST Trigger: GGTGGACCTGCGGGAGCTGCACCGGGACCAGGGCCG...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCAGAGGTCAGCCTCAGTAGCTCCAGGGCTCTCCCTGTCACCAGCCTCTCGTCCCACTGGGACTaGAAGTCTCCGGCCCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HKAEVSLSSSRALPVTSLSSHWD*KSPARN Trigger: GTTGCGGGCCGGAGACTTCCAGTCCCAGTGGGACGA...GAGGCTGGTGACAGGGAGAGCCCTGGAGCTACTGAGGCTGACCTCTGCCTTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGCCGCCTCCTTCCCCTaGTTCCTTGGGAGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSAASFP*FLGRAG Trigger: GCCCGCTCTCCCAAGGAACCAGGGGAAGGAGGCGGC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTTGCTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTTGCTTGCTCCTCCGACCTGGACTCCGTaGTGGCTCCCGGGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLLLDSSGAWHRAGLLAPPTWTP*WLPGLR Trigger: TCTCAGACCCGGGAGCCACCACGGAGTCCAGGTCGG...AGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGCCTCACCCTGGCCTGTaGGCCAGGGCTCGACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSPHPGL*ARARLE Trigger: CTCCAGTCGAGCCCTGGCCCACAGGCCAGGGTGAGG...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGGTGAGGCCTGTGCTTaGCTGCCCCAGCTCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALGEACA*LPQLLR Trigger: GCGCAGGAGCTGGGGCAGCCAAGCACAGGCCTCACC...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCTTCCCCTGGTTCCTTaGGAGAGCGGGCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSLPLVP*ESGQPG Trigger: ACCTGGCTGCCCGCTCTCCCAAGGAACCAGGGGAAG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGCCGACCTGGACTCCGTaGTGGCTCCCGGGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSPTWTP*WLPGLR Trigger: TCTCAGACCCGGGAGCCACCACGGAGTCCAGGTCGG...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTTGCTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTTGCTTGCTCCTCAGCGACTGAGGGGCTaGGCACAGAAGAGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLLDSSGAWHRAGLLAPQRLRG*AQKSPG Trigger: CCCAGGACTCTTCTGTGCCCAGCCCCTCAGTCGCTG...AGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCAGCGACTGAGGGGCTaGGCACAGAAGAGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSQRLRG*AQKSPG Trigger: CCCAGGACTCTTCTGTGCCCAGCCCCTCAGTCGCTG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| 3UTR CAA 72 bp | CGCCTCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTaGCCCATCTGCGCCGGCACTCGGAGGATGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLPAVYIFPAF*PICAGTRRMLG Trigger: CCCCAACATCCTCCGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | CCCAAACCAACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTACGCGGTGCAGGACGGTaGGCTGCAGGGTGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLTKTTLESSGLPELRGAGR*AAGWRR Trigger: CCGCCGCCACCCTGCAGCTCACCGTCCTGCACCGCG...TAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR TCA 90 bp | CCTCTCTTGCTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTTGCTTGCTCCTAAGGGCTGCTCTCTCTaGTCTCACTCCTGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLLLDSSGAWHRAGLLAPKGCSL*SHSWPP Trigger: CGGAGGCCAGGAGTGAGATCAGAGAGAGCAGCCCTT...AGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGACAAATGCTTCCTCCTaGAGCCCTGCGGGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSTNASS*SPAGMG Trigger: CCCCATCCCCGCAGGGCTTCAGGAGGAAGCATTTGT...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCCCTGTCACCAGCCTCTGCCAGTGGCTCAATGCAGGTTCGGCTTCCCTTGCTTCCTTGTGTCCCCTaGCGCCTCTTCCGTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSPASASGSMQVRLPLLPCVP*RLFRPL Trigger: AAGGGGACGGAAGAGGCGTCAGGGGACACAAGGAAG...CAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGGTCAGCTGCTGGGCATaGCCTCTGTCCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSVSCWA*PLSSSS Trigger: TGAGGAGGAGGACAGAGGTCATGCCCAGCAGCTGAC...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGTGTAGCACCGTCACCTaGACGTGGGTAGGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSCSTVT*TWVGDH Trigger: GTGGTCCCCTACCCACGTGCAGGTGACGGTGCTACA...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCCCGAGCAACGCGCGGTaGAGGACGGTGAGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTPSNAR*RTVSCR Trigger: CCTGCAGCTCACCGTCCTGCACCGCGCGTTGCTCGG...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR GCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGAGGGGTTCAAGGAGCTaGCCCACTGGGAGGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSRGSRS*PTGRQQ Trigger: CTGTTGCCTCCCAGTGGGGCAGCTCCTTGAACCCCT...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCTCGTCCCACTGGGACTaGAAGTCTCCGGCCCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALSSHWD*KSPARN Trigger: GTTGCGGGCCGGAGACTTCCAGTCCCAGTGGGACGA...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCTCGGCTTCACAGCCTTaGTCTGGGGAACCCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALSASQP*SGEPWP Trigger: CGGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGA...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCAGAGGTCAGCCTCAGTAGCTCCAGGGCTCTCCCTGTCACCAGCCTCCCTGTGCCTTCTGTGTaGGGAGACTCTGGAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: HKAEVSLSSSRALPVTSLPVPSV*GDSGDP Trigger: AGGGTCTCCAGAGTCTCCCCACACAGAAGGCACAGG...GAGGCTGGTGACAGGGAGAGCCCTGGAGCTACTGAGGCTGACCTCTGCCTTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGGGTGAGGCCTGTGCTTaGCTGCCCCAGCTCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLGEACA*LPQLLR Trigger: GCGCAGGAGCTGGGGCAGCCAAGCACAGGCCTCACC...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGAAGGGCTGCTCTCTCTaGTCTCACTCCTGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSKGCSL*SHSWPP Trigger: CGGAGGCCAGGAGTGAGATCAGAGAGAGCAGCCCTT...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGTCTCAGGCCTTCTCATaGGGTCTTCCTCCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSSQAFS*GLPPAA Trigger: AGCTGCGGGAGGAAGACCTCATGAGAAGGCCTGAGA...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCCTTCCTTGTGTCCCCTaGCGCCTCTTCCGTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALLPCVP*RLFRPL Trigger: AAGGGGACGGAAGAGGCGTCAGGGGACACAAGGAAG...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGTCGCTGGCTTTGCTCTaGCAGGGAGCCATGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSSLALL*QGAMRS Trigger: TGACCTCATGGCTCCCTGTCAGAGCAAAGCCAGCGA...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGAAAGGTCTCAGCGACTaGGGGGCTGGGCACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSKGLSD*GAGHRR Trigger: TCTTCTGTGCCCAGCCCCTCAGTCGCTGAGACCTTT...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | CCCAAACCAACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTACGTACGCGTCGCTCGTaGCCCCGGGTCCCTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLTKTTLESSGLPELRTRRS*PRVPWP Trigger: GGGCCAAGGGACCCGGGGGCACGAGCGACGCGTACG...TAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR GCA 90 bp | ACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGCGTACGCGTCGCTCGTaGCCCCGGGTCCCTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGQGCLLLLSVAQVKVIWRTRRS*PRVPWP Trigger: GGGCCAAGGGACCCGGGGGCACGAGCGACGCGTACG...CCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCTTCTCCTTGCCCACCTaGATCACCGCGTACGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALFSLPT*ITAYAS Trigger: CGACGCGTACGCGGTGATCCAGGTGGGCAAGGAGAA...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCGAGGCAGCTCGAAGGTaGCTTCCTCGCGCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTEAARR*LPRATR Trigger: CCGTGTGGCGCGAGGAAGCCACCTTCGAGCTGCCTC...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGAAGGAGCTGCCCCACTaGGAGGCAACAGGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSKELPH*EATGRA Trigger: TGCTCTACCTGTTGCCTCCCAGTGGGGCAGCTCCTT...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCCCGACCTGGACTCCGTaGTGGCTCCCGGGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTPTWTP*WLPGLR Trigger: TCTCAGACCCGGGAGCCACCACGGAGTCCAGGTCGG...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCTTCACAGCCTTGGTCTaGGGAACCCTGGCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALFTALV*GTLAAG Trigger: TCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAA...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CCA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGTCGGCTTCACAGCCTTaGTCTGGGGAACCCTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRSASQP*SGEPWP Trigger: CGGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGA...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCCTGTGCCTTCTGTGTaGGGAGACTCTGGAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSPVPSV*GDSGDP Trigger: AGGGTCTCCAGAGTCTCCCCACACAGAAGGCACAGG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGGGCTGGCTTCACTTGTaGGGCCTTCCGGGAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSGWLHL*GLPGNT Trigger: AGTGTTTCCCGGAAGGCCCCACAAGTGAAGCCAGCC...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CCA 90 bp | CTCTCCCTGTCACCAGCCTCTGCCAGTGGCTCAATGCAGGTTCGGCTTCCCTTGCTGGGTACCTCTTGCTaGGCTGGCTTCACTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSPASASGSMQVRLPLLGTSC*AGFTCG Trigger: CCCACAAGTGAAGCCAGCCCAGCAAGAGGTACCCAG...CAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGCGGAAGGTGGAGAACTaGGGGAAGAGTATGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSRKVEN*GKSMRR Trigger: CCGCCGCATACTCTTCCCCCAGTTCTCCACCTTCCG...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGCCCAGCTCCTGCGCTTaGCAAAGCTGGGGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSPSSCA*QSWGWM Trigger: CATCCAACCCCAGCTTTGCCAAGCGCAGGAGCTGGG...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGAGAAGTCCCAGCAACTaGACCATCCCTCCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSRSPSN*TIPPLG Trigger: CCCGAGGGGAGGGATGGTCCAGTTGCTGGGACTTCT...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR TCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGCCTCCGCTGGCATTCTaGTGCATCCCCTCGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSPPLAF*CIPSCF Trigger: GAAACACGAGGGGATGCATCAGAATGCCAGCGGAGG...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR TCA 90 bp | CCTCTCTTGCTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTTGCTTGCTCCTGCCACTAGACCTTCCTaGCGTCTCCAGGATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: PLLLDSSGAWHRAGLLAPATRPS*RLQDGM Trigger: CATTCCATCCTGGAGACGTCAGGAAGGTCTAGTGGC...AGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGGCCACTAGACCTTCCTaGCGTCTCCAGGATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSATRPS*RLQDGM Trigger: CATTCCATCCTGGAGACGTCAGGAAGGTCTAGTGGC...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGGATACGCACAGAGGTaGAGCTGGCTTCTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALGYAQR*SWLLTS Trigger: GGAGGTGAGAAGCCAGCTTCACCTCTGTGCGTATCC...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | CCAAATCAGGAGGTAGCAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAATGCAGGACGGTGAGCTaGAGGGTGGCGGCGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PNQEVAAKKQMPSCSSSQCRTVS*RVAAAA Trigger: GGCCGCCGCCGCCACCCTGCAGCTCACCGTCCTGCA...TTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTGCTACCTCCTGATTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCGTGTTTCTGTGCGATaGGGTGAAACGAGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSRVSVR*GETRRP Trigger: AGGCCTCCTCGTTTCACCGCATCGCACAGAAACACG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGGTTAGGCTGAGCTTCTaGGGTCACAGGTTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSVRLSF*GHRFLS Trigger: GGACAGGAACCTGTGACCGCAGAAGCTCAGCCTAAC...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCACTGGGGGAAGAGTATaGGGCGGGAAAGGTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALTGGRV*GGKGLS Trigger: GCTGAGACCTTTCCCGCCGCATACTCTTCCCCCAGT...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGAGGACAGACATGGACTaGGAGAGGGGCGTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSRTDMD*ERGVFC Trigger: GCAGAAGACGCCCCTCTCCCAGTCCATGTCTGTCCT...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCTTCCCCTGGTTCCTTaGGAGAGCGGGCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLLPLVP*ESGQPG Trigger: ACCTGGCTGCCCGCTCTCCCAAGGAACCAGGGGAAG...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCAGAGGTCAGCCTCAGTAGCTCCAGGGCTCTCCCTGTCACCAGCCTCTTTGGGCTGAGCCTCTaGAGAAACTTCCAGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HKAEVSLSSSRALPVTSLFGLSL*RNFQSR Trigger: CCGAGACTGGAAGTTTCTCCAGAGGCTCAGCCCAAA...GAGGCTGGTGACAGGGAGAGCCCTGGAGCTACTGAGGCTGACCTCTGCCTTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CCTCTCTTGCTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTTGCTTGCTCCTAGGGAAGCCTGGCTTTaGGCTGAGCCTCTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLLDSSGAWHRAGLLAPREAWL*AEPLEK Trigger: TTTCTCCAGAGGCTCAGCCCAAAGCCAGGCTTCCCT...AGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGCTGGGTACCTCTTGCTaGGCTGGCTTCACTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSLGTSC*AGFTCG Trigger: CCCACAAGTGAAGCCAGCCCAGCAAGAGGTACCCAG...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCAAGGGCTGCTCTCTCTaGTCTCACTCCTGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTKGCSL*SHSWPP Trigger: CGGAGGCCAGGAGTGAGATCAGAGAGAGCAGCCCTT...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CACAAGGCAGAGGTCAGCCTCAGTAGCTCCAGGGCTCTCCCTGTCACCAGCCTCTGGTCTCCTTCTGTTTaGGGACTAGCTGGATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HKAEVSLSSSRALPVTSLWSPSV*GLAGSA Trigger: AGCTGATCCAGCTAGTCCTCAAACAGAAGGAGACCA...GAGGCTGGTGACAGGGAGAGCCCTGGAGCTACTGAGGCTGACCTCTGCCTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCATTCTCTGTGGGCACTaGTTCACCTGCCCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALILCGH*FTCPAT Trigger: AGTGGCAGGGCAGGTGAATCAGTGCCCACAGAGAAT...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGAGCGAACCTGGGGCCTaGAGTCACACTGATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSSEPGA*SHTDSL Trigger: CAGAGAATCAGTGTGACTTCAGGCCCCAGGTTCGCT...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCTTCACTGGTGTGGTaGGTGTCGGAAGGTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALASLVW*VSEGGE Trigger: TTCTCCACCTTCCGACACTCACCACACCAGTGAAGC...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGTGTAGCACCGTCACCTaGACGTGGGTAGGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLCSTVT*TWVGDH Trigger: GTGGTCCCCTACCCACGTGCAGGTGACGGTGCTACA...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGGCAGCCTCCACGTTTaGTGGAGACATGCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSGSLHV*WRHALS Trigger: AGAGAGAGCATGTCTCCAGCAAACGTGGAGGCTGCC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCAGGGGTTCAAGGAGCTaGCCCACTGGGAGGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTRGSRS*PTGRQQ Trigger: CTGTTGCCTCCCAGTGGGGCAGCTCCTTGAACCCCT...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCCAGGTTCCTGTCCTGTaGCTTCTGTGTGGGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALQVPVL*LLCGET Trigger: AGTCTCCCCACACAGAAGGCACAGGACAGGAACCTG...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGAGGCTGGGTACCTCTTaGTGGGCTGGCTTCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSRLGTS*WAGFTC Trigger: ACAAGTGAAGCCAGCCCAGCAAGAGGTACCCAGCCT...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCCTCTATTGTCCCCACTaGTCAGAGGCCGGTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALLYCPH*SEAGRM Trigger: CATCCTACCGGCCTCTGACCAGTGGGGACAATAGAG...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCTGGCTGTTGTGTTCATaGGCTTCACAGGGTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALWLLCS*ASQGEA Trigger: GGCCTCACCCTGTGAAGCCCATGAACACAACAGCCA...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGAGGGAAGCCTGGCTTTaGGCTGAGCCTCTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSREAWL*AEPLEK Trigger: TTTCTCCAGAGGCTCAGCCCAAAGCCAGGCTTCCCT...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCTACCTCTTGCTGGGCTaGCTTCACTTGTGGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALYLLLG*LHLWGL Trigger: AAGGCCCCACAAGTGAAGCCAGCCCAGCAAGAGGTA...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCCGGAAGGTGGAGAACTaGGGGAAGAGTATGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTRKVEN*GKSMRR Trigger: CCGCCGCATACTCTTCCCCCAGTTCTCCACCTTCCG...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCTGTCACCAGCCTCTGCCAGTGGCTCAATGCAGGTTCGGCTTCCCTTGGTGAGTGTCGGAAGGTaGAGAACTGGGGGAAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSPASASGSMQVRLPLVSVGR*RTGGRV Trigger: TACTCTTCCCCCAGTTCTCCACCTTCCGACACTCAC...CAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGGTGAGTGTCGGAAGGTaGAGAACTGGGGGAAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSVSVGR*RTGGRV Trigger: TACTCTTCCCCCAGTTCTCCACCTTCCGACACTCAC...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCTTTCTTGGGAAGGCTaGAGTTGGACTGGTTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSLSWEG*SWTGSV Trigger: AACCGAACCAGTCCAACTTCAGCCTTCCCAAGAAAG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGCACAGGAATTCACTTCACCTAGACGGTCCTCGCTAGAGCTGACTCGGACAAATGCTTCCTCCTaGAGCCCTGCGGGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRAQEFTSPRRSSLELTRTNASS*SPAGMG Trigger: CCCCATCCCCGCAGGGCTTCAGGAGGAAGCATTTGT...CCGAGTCAGCTCTAGCGAGGACCGTCTAGGTGAAGTGAATTCCTGTGCTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCTCCTTCTCTTTCTCTaGGACAGTGGGAAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSLLLFL*DSGKRF Trigger: GAACCTCTTCCCACTGTCTCAGAGAAAGAGAAGGAG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGTCTCAGGCCTTCTCATaGGGTCTTCCTCCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLSQAFS*GLPPAA Trigger: AGCTGCGGGAGGAAGACCTCATGAGAAGGCCTGAGA...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGGAAGAAATGTTAGGCTaGGCTTCTGCGGTCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSEEMLG*ASAVTG Trigger: ACCTGTGACCGCAGAAGCTCAGCCTAACATTTCTTC...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGGCCTGAAGTCACACTaGTTCTCTGTGGGCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSGLKSH*FSVGTD Trigger: ATCAGTGCCCACAGAGAATCAGTGTGACTTCAGGCC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGCACAGGAATTCACTTCACCTAGACGGTCCTCGCTAGAGCTGACTCGGTGTAGCACCGTCACCTaGACGTGGGTAGGGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FRAQEFTSPRRSSLELTRCSTVT*TWVGDH Trigger: GTGGTCCCCTACCCACGTGCAGGTGACGGTGCTACA...CCGAGTCAGCTCTAGCGAGGACCGTCTAGGTGAAGTGAATTCCTGTGCTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGTTCCTCCTGAAGCCCTaGGGGGATGGGGAATTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSFLLKP*GDGELE Trigger: TTCTAATTCCCCATCCCCGCAGGGCTTCAGGAGGAA...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR GCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGTGGACGAGAACAAATaGTTCCTCCTGAAGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSVDENK*FLLKPC Trigger: GCAGGGCTTCAGGAGGAAGCATTTGTTCTCGTCCAC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCGTTTGCTGGAGACATaGTCTCTCTATTGTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSRLLET*SLYCPH Trigger: GTGGGGACAATAGAGAGAGCATGTCTCCAGCAAACG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR GCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCACTGGGGGAAGAGTATaGGGCGGGAAAGGTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTTGGRV*GGKGLS Trigger: GCTGAGACCTTTCCCGCCGCATACTCTTCCCCCAGT...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGAGGACAGACATGGACTaGGAGAGGGGCGTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLRTDMD*ERGVFC Trigger: GCAGAAGACGCCCCTCTCCCAGTCCATGTCTGTCCT...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGTGTCTGACTTGGAAGTaGGCAGGACAGACATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSCLTWK*AGQTWT Trigger: AGTCCATGTCTGTCCTGCCCACTTCCAAGTCAGACA...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGAAAGAGAGTCATTCTTaGACCGGAGGCCCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSKESHS*TGGPQG Trigger: TCCTTGGGGGCCTCCGGTCCAAGAATGACTCTCTTT...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCAGAGGCCGGTAGGATaGCAAAGACATGGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSQRPVG*QRHGLH Trigger: ATGAAGTCCATGTCTTTGCCATCCTACCGGCCTCTG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGTGTCTTTTGTCTCTCTaGCAGCCTCCACGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSCLLSL*QPPRLL Trigger: CAGCAAACGTGGAGGCTGCCAGAGAGACAAAAGACA...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGCACAGGAATTCACTTCACCTAGACGGTCCTCGCTAGAGCTGACTCGGTTCACAGCCTTGGTCTaGGGAACCCTGGCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRAQEFTSPRRSSLELTRFTALV*GTLAAG Trigger: TCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAA...CCGAGTCAGCTCTAGCGAGGACCGTCTAGGTGAAGTGAATTCCTGTGCTCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCTTTGGGCTGAGCCTCTaGAGAAACTTCCAGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALFGLSL*RNFQSR Trigger: CCGAGACTGGAAGTTTCTCCAGAGGCTCAGCCCAAA...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCCACACTGATTCTCTGTaGGCACTGATTCACCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALHTDSL*ALIHLP Trigger: GGGCAGGTGAATCAGTGCCCACAGAGAATCAGTGTG...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCGATTCTGCTTCACTaGTGTGGTGAGTGTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPQFTSFRPSCPSAPALAILLH*CGECRK Trigger: CTTCCGACACTCACCACACCAGTGAAGCAGAATCGC...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGCAACAGAACTTTGTCTaGCTTGGAAGTGGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSQQNFV*LGSGQD Trigger: GTCCTGCCCACTTCCAAGTCAGACAAAGTTCTGTTG...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCTCCAGCTCCCGCACCTaGAACTCCTTCTTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTSSSRT*NSFLLM Trigger: CATCAGCAAGAAGGAGTTTCAGGTGCGGGAGCTGGA...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGAGAGAACTGTGTCTCTaGGTCACATCTCAAGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSRELCL*VTSQVG Trigger: TCCGACTTGAGATGTGACTCAGAGACACAGTTCTCT...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGACACACACTCTGTCATaGGGGTCTTTCCCGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSTHTLS*GSFPIH Trigger: ATGAATCGGGAAAGACCCTCATGACAGAGTGTGTGT...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGCACAGGAATTCACTTCACCTAGACGGTCCTCGCTAGAGCTGACTCGGGGATACGCACAGAGGTaGAGCTGGCTTCTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRAQEFTSPRRSSLELTRGYAQR*SWLLTS Trigger: GGAGGTGAGAAGCCAGCTTCACCTCTGTGCGTATCC...CCGAGTCAGCTCTAGCGAGGACCGTCTAGGTGAAGTGAATTCCTGTGCTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGGGCAGCCTCCACGTTTaGTGGAGACATGCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLGSLHV*WRHALS Trigger: AGAGAGAGCATGTCTCCAGCAAACGTGGAGGCTGCC...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCTTTCTCTGAGACAGTaGGAAGAGGTTCGCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSLSLRQ*EEVRFH Trigger: GTGAAAGCGAACCTCTTCCCACTGTCTCAGAGAAAG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCTGGCTGTTGTGTTCATaGGCTTCACAGGGTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTWLLCS*ASQGEA Trigger: GGCCTCACCCTGTGAAGCCCATGAACACAACAGCCA...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR CAA 72 bp | TTGCTGGACAGCAGTGGAGCATGGCACAGGGCAGGGTaGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLDSSGAWHRAG*LAPSFCGPSKG Trigger: ACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGTGCCATGCTCCACTGCTGTCCAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGTCATTCCGCCATCGTaGACATTATCCACAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSVIPPS*TLSTED Trigger: GTCTTCTGTGGATAATGTTCACGATGGCGGAATGAC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGGTCAGCTGCTGGGCATaGCCTCTGTCCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGQGCLLLLSVAQVKVIWVSCWA*PLSSSS Trigger: TGAGGAGGAGGACAGAGGTCATGCCCAGCAGCTGAC...CCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGGGCCTGAAGTCACACTaGTTCTCTGTGGGCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLGLKSH*FSVGTD Trigger: ATCAGTGCCCACAGAGAATCAGTGTGACTTCAGGCC...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGCGTTTGCTGGAGACATaGTCTCTCTATTGTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRRLLET*SLYCPH Trigger: GTGGGGACAATAGAGAGAGCATGTCTCCAGCAAACG...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGGCAAAGAGGACTTCTTaGTCTCCTGTTTCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSAKRTS*SPVSCC Trigger: ACAGCAAGAAACAGGAGAGCAAGAAGTCCTCTTTGC...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGAGGGGTTCAAGGAGCTaGCCCACTGGGAGGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: TGQGCLLLLSVAQVKVIWRGSRS*PTGRQQ Trigger: CTGTTGCCTCCCAGTGGGGCAGCTCCTTGAACCCCT...CCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGCACAGGAATTCACTTCACCTAGACGGTCCTCGCTAGAGCTGACTCGGCAGGTTCCTGTCCTGTaGCTTCTGTGTGGGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FRAQEFTSPRRSSLELTRQVPVL*LLCGET Trigger: AGTCTCCCCACACAGAAGGCACAGGACAGGAACCTG...CCGAGTCAGCTCTAGCGAGGACCGTCTAGGTGAAGTGAATTCCTGTGCTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGTCTTTCATCATCCGATaGCACTTCAGGAATGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSSFIIR*HFRNGR Trigger: CCGTCCATTCCTGAAGTGGCATCGGATGATGAAAGA...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR GCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGCCGTTGCTTGTTTTTaGGATTCTGCTTCACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSAVACF*DSASLV Trigger: CACCAGTGAAGCAGAATCGCAAAAACAAGCAACGGC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CCA 90 bp | CCCAAACCAACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTATTCTCCTTGCCCACCTaGATCACCGCGTACGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLTKTTLESSGLPELFSLPT*ITAYAS Trigger: CGACGCGTACGCGGTGATCCAGGTGGGCAAGGAGAA...TAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CTGGTATTTAATCCAACGCCTTCATACCCCACCCAAATCTCTGGCTGGGCTTTCTTCTCCTTGCCCACCTaGATCACCGCGTACGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LVFNPTPSYPTQISGWAFFSLPT*ITAYAS Trigger: CGACGCGTACGCGGTGATCCAGGTGGGCAAGGAGAA...GAAAGCCCAGCCAGAGATTTGGGTGGGGTATGAAGGCGTTGGATTAAATACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGAACTTTGTCTGACTTaGAAGTGGGCAGGACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSELCLT*KWAGQT Trigger: TGTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCAAAGAGAGTCATTCTTaGACCGGAGGCCCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTKESHS*TGGPQG Trigger: TCCTTGGGGGCCTCCGGTCCAAGAATGACTCTCTTT...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGCAGAGGCCGGTAGGATaGCAAAGACATGGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRQRPVG*QRHGLH Trigger: ATGAAGTCCATGTCTTTGCCATCCTACCGGCCTCTG...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGTGTCTTTTGTCTCTCTaGCAGCCTCCACGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRCLLSL*QPPRLL Trigger: CAGCAAACGTGGAGGCTGCCAGAGAGACAAAAGACA...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGAGTTTGCAATCTTGGTaGCTGTTGTGTTCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSSLQSW*LLCSWA Trigger: AGCCCATGAACACAACAGCCACCAAGATTGCAAACT...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CCA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGTGTTTGAGGACTAGCTaGATCAGCTCATCGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRCLRTS*ISSSWV Trigger: GACCCACGATGAGCTGATCCAGCTAGTCCTCAAACA...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGGCGATTCTGCTTCACTaGTGTGGTGAGTGTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLAILLH*CGECRK Trigger: CTTCCGACACTCACCACACCAGTGAAGCAGAATCGC...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | ACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGCCCAGCTCCTGCGCTTaGCAAAGCTGGGGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TGQGCLLLLSVAQVKVIWPSSCA*QSWGWM Trigger: CATCCAACCCCAGCTTTGCCAAGCGCAGGAGCTGGG...CCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR CAA 72 bp | CTGCCAGTGGCTCAATGCAGGTTCGGCTTCCCTTGGTaGGTATCACTCCTTAGTGCCCGACCAAATAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPVAQCRFGFPW*VSLLSARPNSQ Trigger: CTGACTATTTGGTCGGGCACTAAGGAGTGATACCAACCAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGTGGTCTCCTTCTGTTTaGGGACTAGCTGGATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLWSPSV*GLAGSA Trigger: AGCTGATCCAGCTAGTCCTCAAACAGAAGGAGACCA...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR TCA 90 bp | ACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGTCGCTGGCTTTGCTCTaGCAGGGAGCCATGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGQGCLLLLSVAQVKVIWSLALL*QGAMRS Trigger: TGACCTCATGGCTCCCTGTCAGAGCAAAGCCAGCGA...CCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCTGTCTGACTTGGAAGTaGGCAGGACAGACATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTCLTWK*AGQTWT Trigger: AGTCCATGTCTGTCCTGCCCACTTCCAAGTCAGACA...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGTGTCTGACTTGGAAGTaGGCAGGACAGACATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLCLTWK*AGQTWT Trigger: AGTCCATGTCTGTCCTGCCCACTTCCAAGTCAGACA...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | TTCAGAGCACAGGAATTCACTTCACCTAGACGGTCCTCGCTAGAGCTGACTCGGAAAGAGAGTCATTCTTaGACCGGAGGCCCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRAQEFTSPRRSSLELTRKESHS*TGGPQG Trigger: TCCTTGGGGGCCTCCGGTCCAAGAATGACTCTCTTT...CCGAGTCAGCTCTAGCGAGGACCGTCTAGGTGAAGTGAATTCCTGTGCTCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCCAGAGGCCGGTAGGATaGCAAAGACATGGACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTQRPVG*QRHGLH Trigger: ATGAAGTCCATGTCTTTGCCATCCTACCGGCCTCTG...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | CTGGTATTTAATCCAACGCCTTCATACCCCACCCAAATCTCTGGCTGGGCTTTCAAGGAGCTGCCCCACTaGGAGGCAACAGGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVFNPTPSYPTQISGWAFKELPH*EATGRA Trigger: TGCTCTACCTGTTGCCTCCCAGTGGGGCAGCTCCTT...GAAAGCCCAGCCAGAGATTTGGGTGGGGTATGAAGGCGTTGGATTAAATACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | ACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGGGCTGGCTTCACTTGTaGGGCCTTCCGGGAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: TGQGCLLLLSVAQVKVIWGWLHL*GLPGNT Trigger: AGTGTTTCCCGGAAGGCCCCACAAGTGAAGCCAGCC...CCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| 3UTR CAA 72 bp | AAACCTCCCTATGCTGCTGAGAATGCAATTGAACTGTaGGTCACCCGATTTCACCTCCCTGGTGCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPPYAAENAIEL*VTRFHLPGAGW Trigger: CCAGCCAGCACCAGGGAGGTGAAATCGGGTGACCAACAGTTCAATTGCATTCTCAGCAGCATAGGGAGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR TCA 90 bp | AGGCAGGAGGATAATGAGTTCAAGGTCATTAATAGCCATAAAATCAAGATTAACCGCGGTGCAGGACGGTaGGCTGCAGGGTGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RQEDNEFKVINSHKIKINRGAGR*AAGWRR Trigger: CCGCCGCCACCCTGCAGCTCACCGTCCTGCACCGCG...GTTAATCTTGATTTTATGGCTATTAATGACCTTGAACTCATTATCCTCCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR TCA 90 bp | CCAAATCAGGAGGTAGCAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAACCTCCGCTGGCATTCTaGTGCATCCCCTCGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PNQEVAAKKQMPSCSSSQPPLAF*CIPSCF Trigger: GAAACACGAGGGGATGCATCAGAATGCCAGCGGAGG...TTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTGCTACCTCCTGATTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR TCA 90 bp | CAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAACTGTTCCTTACCGCTGAGCGAACCTGGGGCCTaGAGTCACACTGATTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQRSRCHPVALHNCSLPLSEPGA*SHTDSL Trigger: CAGAGAATCAGTGTGACTTCAGGCCCCAGGTTCGCT...CAGCGGTAAGGAACAGTTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR GCA 90 bp | ACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGCGTGTTTCTGTGCGATaGGGTGAAACGAGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGQGCLLLLSVAQVKVIWRVSVR*GETRRP Trigger: AGGCCTCCTCGTTTCACCGCATCGCACAGAAACACG...CCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGAAGTGGCTTCTTCTTaGCAAAATTCTCAGCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSEVASS*QNSQLY Trigger: GTAGAGCTGAGAATTTTGGCAAGAAGAAGCCACTTC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CCA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCGCCGCCTCCTTCCCCTaGTTCCTTGGGAGAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVAASFP*FLGRAG Trigger: GCCCGCTCTCCCAAGGAACCAGGGGAAGGAGGCGGC...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | TTCAGAGCACAGGAATTCACTTCACCTAGACGGTCCTCGCTAGAGCTGACTCGGTGTCTTTTGTCTCTCTaGCAGCCTCCACGTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRAQEFTSPRRSSLELTRCLLSL*QPPRLL Trigger: CAGCAAACGTGGAGGCTGCCAGAGAGACAAAAGACA...CCGAGTCAGCTCTAGCGAGGACCGTCTAGGTGAAGTGAATTCCTGTGCTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCCTTTCTCTGAGACAGTaGGAAGAGGTTCGCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTLSLRQ*EEVRFH Trigger: GTGAAAGCGAACCTCTTCCCACTGTCTCAGAGAAAG...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | CCCAAACCAACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAGTGGACGAGAACAAATaGTTCCTCCTGAAGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLTKTTLESSGLPELVDENK*FLLKPC Trigger: GCAGGGCTTCAGGAGGAAGCATTTGTTCTCGTCCAC...TAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCGAGGCAGCTCGAAGGTaGCTTCCTCGCGCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVEAARR*LPRATR Trigger: CCGTGTGGCGCGAGGAAGCCACCTTCGAGCTGCCTC...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CCAAATCAGGAGGTAGCAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAACTCTATTGTCCCCACTaGTCAGAGGCCGGTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PNQEVAAKKQMPSCSSSQLYCPH*SEAGRM Trigger: CATCCTACCGGCCTCTGACCAGTGGGGACAATAGAG...TTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTGCTACCTCCTGATTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | AGTGCAAGCACCTTACCCACTGAGCTATATCCCCCAATCCATGGAGAACATATTAAGGAGCTGCCCCACTaGGAGGCAACAGGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SASTLPTELYPPIHGEHIKELPH*EATGRA Trigger: TGCTCTACCTGTTGCCTCCCAGTGGGGCAGCTCCTT...AATATGTTCTCCATGGATTGGGGGATATAGCTCAGTGGGTAAGGTGCTTGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCAGTTTGCAATCTTGGTaGCTGTTGTGTTCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTSLQSW*LLCSWA Trigger: AGCCCATGAACACAACAGCCACCAAGATTGCAAACT...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR CAA 72 bp | ACAGACAGTTGTGAGCTACCATGTGGTTGCTGGGAATaGAACCCAAGTCCTCTGGACCTGGTCCACTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TDSCELPCGCWE*NPSPLDLVHCS Trigger: TGAACAGTGGACCAGGTCCAGAGGACTTGGGTTCAATTCCCAGCAACCACATGGTAGCTCACAACTGTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTCGGAACATCAGACAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEHQTVL Trigger: GAGCACTGTCTGATGTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | ACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAAAAATTGAGTCTCAGGCCTTCTCATaGGGTCTTCCTCCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLTKTTLESSGLPELKIESQAFS*GLPPAA Trigger: AGCTGCGGGAGGAAGACCTCATGAGAAGGCCTGAGA...CTCAATTTTTAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | AGTGCAAGCACCTTACCCACTGAGCTATATCCCCCAATCCATGGAGAACATATTTCCAGCTCCCGCACCTaGAACTCCTTCTTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SASTLPTELYPPIHGEHISSSRT*NSFLLM Trigger: CATCAGCAAGAAGGAGTTTCAGGTGCGGGAGCTGGA...AATATGTTCTCCATGGATTGGGGGATATAGCTCAGTGGGTAAGGTGCTTGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CCCAAACCAACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAGAAGAAATGTTAGGCTaGGCTTCTGCGGTCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLTKTTLESSGLPELEEMLG*ASAVTG Trigger: ACCTGTGACCGCAGAAGCTCAGCCTAACATTTCTTC...TAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | AGTGCAAGCACCTTACCCACTGAGCTATATCCCCCAATCCATGGAGAACATATTATTCTCTGTGGGCACTaGTTCACCTGCCCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SASTLPTELYPPIHGEHIILCGH*FTCPAT Trigger: AGTGGCAGGGCAGGTGAATCAGTGCCCACAGAGAAT...AATATGTTCTCCATGGATTGGGGGATATAGCTCAGTGGGTAAGGTGCTTGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | CCAAATCAGGAGGTAGCAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAATTCCTCCTGAAGCCCTaGGGGGATGGGGAATTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PNQEVAAKKQMPSCSSSQFLLKP*GDGELE Trigger: TTCTAATTCCCCATCCCCGCAGGGCTTCAGGAGGAA...TTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTGCTACCTCCTGATTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | AGTGCAAGCACCTTACCCACTGAGCTATATCCCCCAATCCATGGAGAACATATTGGCAGCCTCCACGTTTaGTGGAGACATGCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SASTLPTELYPPIHGEHIGSLHV*WRHALS Trigger: AGAGAGAGCATGTCTCCAGCAAACGTGGAGGCTGCC...AATATGTTCTCCATGGATTGGGGGATATAGCTCAGTGGGTAAGGTGCTTGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGGAAGTGGCTTCTTCTTaGCAAAATTCTCAGCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: AGETAHIPKSLSHLTLSLEVASS*QNSQLY Trigger: GTAGAGCTGAGAATTTTGGCAAGAAGAAGCCACTTC...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | AGTGCAAGCACCTTACCCACTGAGCTATATCCCCCAATCCATGGAGAACATATTTGGCTGTTGTGTTCATaGGCTTCACAGGGTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SASTLPTELYPPIHGEHIWLLCS*ASQGEA Trigger: GGCCTCACCCTGTGAAGCCCATGAACACAACAGCCA...AATATGTTCTCCATGGATTGGGGGATATAGCTCAGTGGGTAAGGTGCTTGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAACTGTTCCTTACCGCTGAGAGAACTGTGTCTCTaGGTCACATCTCAAGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQRSRCHPVALHNCSLPLRELCL*VTSQVG Trigger: TCCGACTTGAGATGTGACTCAGAGACACAGTTCTCT...CAGCGGTAAGGAACAGTTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CCCAAACCAACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAACACACACTCTGTCATaGGGGTCTTTCCCGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLTKTTLESSGLPELTHTLS*GSFPIH Trigger: ATGAATCGGGAAAGACCCTCATGACAGAGTGTGTGT...TAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | CTGGTATTTAATCCAACGCCTTCATACCCCACCCAAATCTCTGGCTGGGCTTTCGTCATTCCGCCATCGTaGACATTATCCACAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVFNPTPSYPTQISGWAFVIPPS*TLSTED Trigger: GTCTTCTGTGGATAATGTTCACGATGGCGGAATGAC...GAAAGCCCAGCCAGAGATTTGGGTGGGGTATGAAGGCGTTGGATTAAATACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | AGTGCAAGCACCTTACCCACTGAGCTATATCCCCCAATCCATGGAGAACATATTTTCCTCCTGAAGCCCTaGGGGGATGGGGAATTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SASTLPTELYPPIHGEHIFLLKP*GDGELE Trigger: TTCTAATTCCCCATCCCCGCAGGGCTTCAGGAGGAA...AATATGTTCTCCATGGATTGGGGGATATAGCTCAGTGGGTAAGGTGCTTGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCAACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAGAACTTTGTCTGACTTaGAAGTGGGCAGGACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLTKTTLESSGLPELELCLT*KWAGQT Trigger: TGTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTC...TAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAACTGTTCCTTACCGCTGGAACTTTGTCTGACTTaGAAGTGGGCAGGACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QQRSRCHPVALHNCSLPLELCLT*KWAGQT Trigger: TGTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTC...CAGCGGTAAGGAACAGTTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCTTCACAGCCTTGGTCTaGGGAACCCTGGCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVFTALV*GTLAAG Trigger: TCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAA...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | CCAAATCAGGAGGTAGCAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAATGTTTGAGGACTAGCTaGATCAGCTCATCGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PNQEVAAKKQMPSCSSSQCLRTS*ISSSWV Trigger: GACCCACGATGAGCTGATCCAGCTAGTCCTCAAACA...TTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTGCTACCTCCTGATTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| 3UTR CAA 72 bp | TCTGACTTAAACCTCCCTATGCTGCTGAGAATGCAATaGAACTGTTGGTCACCCGATTTCACCTCCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDLNLPMLLRMQ*NCWSPDFTSLV Trigger: CACCAGGGAGGTGAAATCGGGTGACCAACAGTTCAATTGCATTCTCAGCAGCATAGGGAGGTTTAAGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | ACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAAAAATTGAGCAACAGAACTTTGTCTaGCTTGGAAGTGGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLTKTTLESSGLPELKIEQQNFV*LGSGQD Trigger: GTCCTGCCCACTTCCAAGTCAGACAAAGTTCTGTTG...CTCAATTTTTAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | ACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAAAAATTGAGCGTTTGCTGGAGACATaGTCTCTCTATTGTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLTKTTLESSGLPELKIERLLET*SLYCPH Trigger: GTGGGGACAATAGAGAGAGCATGTCTCCAGCAAACG...CTCAATTTTTAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAATCGTCCCACTGGGACTaGAAGTCTCCGGCCCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKSSHWD*KSPARN Trigger: GTTGCGGGCCGGAGACTTCCAGTCCCAGTGGGACGA...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAACTTCCCCTGGTTCCTTaGGAGAGCGGGCAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKLPLVP*ESGQPG Trigger: ACCTGGCTGCCCGCTCTCCCAAGGAACCAGGGGAAG...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAAACAAATGCTTCCTCCTaGAGCCCTGCGGGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKTNASS*SPAGMG Trigger: CCCCATCCCCGCAGGGCTTCAGGAGGAAGCATTTGT...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCCACACTGATTCTCTGTaGGCACTGATTCACCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVHTDSL*ALIHLP Trigger: GGGCAGGTGAATCAGTGCCCACAGAGAATCAGTGTG...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAAAAAGGTCTCAGCGACTaGGGGGCTGGGCACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKKGLSD*GAGHRR Trigger: TCTTCTGTGCCCAGCCCCTCAGTCGCTGAGACCTTT...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | ATGGAGAACATATTTTTAAGGCCAGAGGGTACTGCCAATTGTAAAAGGCATATTGCTTCACTGGTGTGGTaGGTGTCGGAAGGTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MENIFLRPEGTANCKRHIASLVW*VSEGGE Trigger: TTCTCCACCTTCCGACACTCACCACACCAGTGAAGC...AATATGCCTTTTACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAAAGGACAGACATGGACTaGGAGAGGGGCGTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKRTDMD*ERGVFC Trigger: GCAGAAGACGCCCCTCTCCCAGTCCATGTCTGTCCT...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAACATATTTTTAAGGCCAGAGGGTACTGCCAATTGTAAAAGGCATATTGTGGACGAGAACAAATaGTTCCTCCTGAAGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MENIFLRPEGTANCKRHIVDENK*FLLKPC Trigger: GCAGGGCTTCAGGAGGAAGCATTTGTTCTCGTCCAC...AATATGCCTTTTACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAAGTTAGGCTGAGCTTCTaGGGTCACAGGTTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKVRLSF*GHRFLS Trigger: GGACAGGAACCTGTGACCGCAGAAGCTCAGCCTAAC...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAAAGGCTGGGTACCTCTTaGTGGGCTGGCTTCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKRLGTS*WAGFTC Trigger: ACAAGTGAAGCCAGCCCAGCAAGAGGTACCCAGCCT...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAACTCTATTGTCCCCACTaGTCAGAGGCCGGTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKLYCPH*SEAGRM Trigger: CATCCTACCGGCCTCTGACCAGTGGGGACAATAGAG...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CCA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCCTTTCTCTGAGACAGTaGGAAGAGGTTCGCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVLSLRQ*EEVRFH Trigger: GTGAAAGCGAACCTCTTCCCACTGTCTCAGAGAAAG...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAATACCTCTTGCTGGGCTaGCTTCACTTGTGGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKYLLLG*LHLWGL Trigger: AAGGCCCCACAAGTGAAGCCAGCCCAGCAAGAGGTA...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | ATGGAGAACATATTTTTAAGGCCAGAGGGTACTGCCAATTGTAAAAGGCATATTCTTTCTTGGGAAGGCTaGAGTTGGACTGGTTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MENIFLRPEGTANCKRHILSWEG*SWTGSV Trigger: AACCGAACCAGTCCAACTTCAGCCTTCCCAAGAAAG...AATATGCCTTTTACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | ATGGAGAACATATTTTTAAGGCCAGAGGGTACTGCCAATTGTAAAAGGCATATTCTCCTTCTCTTTCTCTaGGACAGTGGGAAGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MENIFLRPEGTANCKRHILLLFL*DSGKRF Trigger: GAACCTCTTCCCACTGTCTCAGAGAAAGAGAAGGAG...AATATGCCTTTTACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCGCAAAGAGGACTTCTTaGTCTCCTGTTTCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVAKRTS*SPVSCC Trigger: ACAGCAAGAAACAGGAGAGCAAGAAGTCCTCTTTGC...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR TCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAACTTTCTTGGGAAGGCTaGAGTTGGACTGGTTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKLSWEG*SWTGSV Trigger: AACCGAACCAGTCCAACTTCAGCCTTCCCAAGAAAG...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAACATATTTTTAAGGCCAGAGGGTACTGCCAATTGTAAAAGGCATATTGCCGTTGCTTGTTTTTaGGATTCTGCTTCACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MENIFLRPEGTANCKRHIAVACF*DSASLV Trigger: CACCAGTGAAGCAGAATCGCAAAAACAAGCAACGGC...AATATGCCTTTTACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAACATATTTTTAAGGCCAGAGGGTACTGCCAATTGTAAAAGGCATATTGCAAAGAGGACTTCTTaGTCTCCTGTTTCTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MENIFLRPEGTANCKRHIAKRTS*SPVSCC Trigger: ACAGCAAGAAACAGGAGAGCAAGAAGTCCTCTTTGC...AATATGCCTTTTACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR GCA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAATCTTTCATCATCCGATaGCACTTCAGGAATGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKSFIIR*HFRNGR Trigger: CCGTCCATTCCTGAAGTGGCATCGGATGATGAAAGA...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS CCA 90 bp | TCACAGGGTGAGGCCTCGGCTTCACAGCCTTGGTCTGGGGAACCCTaGCCGCAGGAACTGGTGGTTTCGGTTCCGACCTGGACTCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQGEASASQPWSGEP*PQELVVSVPTWTPW Trigger: CCACGGAGTCCAGGTCGGAACCGAAACCACCAGTTCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAGGCCTCACCCTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033878.14 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCTGTCACCAGCCTCTGCCAGTGGCTCAATGCAGGTTCGGCTTCCCTTGCCTTCCCCTGGTTCCTaGGGAGAGCGGGCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLSPASASGSMQVRLPLPSPGS*GERAAR Trigger: CCTGGCTGCCCGCTCTCCCAAGGAACCAGGGGAAGG...CAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS GCA 90 bp | TTCGGTTCCGACCTGGACTCCGTGGTGGCTCCCGGGTCTGAGATCTaGACGTCCTCAAAGGGGTTCAAGGAGCTGCCCCACTGGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FGSDLDSVVAPGSEI*TSSKGFKELPHWEA Trigger: TGCCTCCCAGTGGGGCAGCTCCTTGAACCCCTTTGAGGACGTGCAGATCTCAGACCCGGGAGCCACCACGGAGTCCAGGTCGGAACCGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CCA 90 bp | CCCTGGCCGCAGGAACTGGTGGTTTCGGTTCCGACCTGGACTCCGTaGTGGCTCCCGGGTCTGAGATCTGCACGTCCTCAAAGGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PWPQELVVSVPTWTP*WLPGLRSARPQRGS Trigger: TGAACCCCTTTGAGGACGTGCAGATCTCAGACCCGGGAGCCACCACGGAGTCCAGGTCGGAACCGAAACCACCAGTTCCTGCGGCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCCCTTCCCCTGGTTCCTaGGGAGAGCGGGCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFPQFTSFRPSCPSAPALPSPGS*GERAAR Trigger: CCTGGCTGCCCGCTCTCCCAAGGAACCAGGGGAAGG...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS TCA 90 bp | TGGTGGTTTCGGTTCCGACCTGGACTCCGTGGTGGCTCCCGGGTCTaGGATCTGCACGTCCTCAAAGGGGTTCAAGGAGCTGCCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WWFRFRPGLRGGSRV*DLHVLKGVQGAAPL Trigger: CAGTGGGGCAGCTCCTTGAACCCCTTTGAGGACGTGCAGATCTCAGACCCGGGAGCCACCACGGAGTCCAGGTCGGAACCGAAACCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CCA 90 bp | TGGCCGCAGGAACTGGTGGTTTCGGTTCCGACCTGGACTCCGTGGTaGCTCCCGGGTCTGAGATCTGCACGTCCTCAAAGGGGTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WPQELVVSVPTWTPW*LPGLRSARPQRGSR Trigger: CCTTGAACCCCTTTGAGGACGTGCAGATCTCAGACCCGGGAGCCACCACGGAGTCCAGGTCGGAACCGAAACCACCAGTTCCTGCGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 90 bp | TGCGGTCACAGGTTCCTGTCCTGTGCCTTCTGTGTGGGGAGACTCTaGAGACCCTGCACGGAGCACGCTTCCAGCAACAGGCCCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CGHRFLSCAFCVGRL*RPCTEHASSNRPFL Trigger: CAGGAAGGGCCTGTTGCTGGAAGCGTGCTCCGTGCAGGGTCTCCAGAGTCTCCCCACACAGAAGGCACAGGACAGGAACCTGTGACCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGCTCGGCTTCACAGCCTaGGTCTGGGGAACCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSLGFTA*VWGTLA Trigger: GGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAG...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCTGGGCTGGCTTCACTaGTGGGGCCTTCCGGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSLGWLH*WGLPGN Trigger: GTTTCCCGGAAGGCCCCACAAGTGAAGCCAGCCCAG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCCCCAGCTCCTGCGCTaGGCAAAGCTGGGGTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSPQLLR*AKLGLD Trigger: ATCCAACCCCAGCTTTGCCAAGCGCAGGAGCTGGGG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS GCA 90 bp | TGGAATCCTTGGTGGAAGAGTCGGACAGTCGCCTGTCAGAAGATGTaGCGCCTCCTTCCCCTGGTTCCTTGGGAGAGCGGGCAGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WNPWWKSRTVACQKM*RLLPLVPWESGQPG Trigger: ACCTGGCTGCCCGCTCTCCCAAGGAACCAGGGGAAGGAGGCGGCACATCTTCTGACAGGCGACTGTCCGACTCTTCCACCAAGGATTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 90 bp | TTGTGTTCATGGGCTTCACAGGGTGAGGCCTCGGCTTCACAGCCTTaGTCTGGGGAACCCTGGCCGCAGGAACTGGTGGTTTCGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LCSWASQGEASASQP*SGEPWPQELVVSVP Trigger: CGGAACCGAAACCACCAGTTCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAGGCCTCACCCTGTGAAGCCCATGAACACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033878.14 |
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| CDS CCA 90 bp | GAGAAACTTCCAGTCTCGGCTTCACAGCCTTGGTCTGGGGAACCCTaGCCGCAGGAACTGGTGGTTTCGGTTCCGACCTGGACTCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EKLPVSASQPWSGEP*PQELVVSVPTWTPW Trigger: CCACGGAGTCCAGGTCGGAACCGAAACCACCAGTTCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAGACTGGAAGTTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | CACAAGGCAGAGGTCAGCCTCAGTAGCTCCAGGGCTCTCCCTGTCACCAGCCTCTGCCAGCTTCCTTCCTaGTGTCCCCTGACGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HKAEVSLSSSRALPVTSLCQLPS*CPLTPL Trigger: AAGAGGCGTCAGGGGACACAAGGAAGGAAGCTGGCA...GAGGCTGGTGACAGGGAGAGCCCTGGAGCTACTGAGGCTGACCTCTGCCTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS TCA 90 bp | GTCCCACTGGGACTGGAAGTCTCCGGCCCGCAACAGAACTTTGTCTaGCTTGGAAGTGGGCAGGACAGACATGGACTGGGAGAGGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VPLGLEVSGPQQNFV*LGSGQDRHGLGEGR Trigger: ACGCCCCTCTCCCAGTCCATGTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTCTGTTGCGGGCCGGAGACTTCCAGTCCCAGTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS GCA 90 bp | GGCTGTTGTGTTCATGGGCTTCACAGGGTGAGGCCTGTGCTTGGCTaGCCCAGCTCCTGCGCTTGGCAAAGCTGGGGTTGGATGTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCCVHGLHRVRPVLG*PSSCAWQSWGWMYL Trigger: GAGATACATCCAACCCCAGCTTTGCCAAGCGCAGGAGCTGGGGCAGCCAAGCACAGGCCTCACCCTGTGAAGCCCATGAACACAACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 90 bp | TCCGAGGCGGAGGAGGACTCATCCTCATGGGCGTCATCGTCCCACTaGGACTGGAAGTCTCCGGCCCGCAACAGAACTTTGTCTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEAEEDSSSWASSSH*DWKSPARNRTLSDL Trigger: CAAGTCAGACAAAGTTCTGTTGCGGGCCGGAGACTTCCAGTCCCAGTGGGACGATGACGCCCATGAGGATGAGTCCTCCTCCGCCTCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 90 bp | CAGAGGGAAAGGGGGCAAAGAGAGCAGAGTCGGGGGAGGGAAGCCTaGCTTTGGGCTGAGCCTCTGGAGAAACTTCCAGTCTCGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QRERGQREQSRGREA*LWAEPLEKLPVSAS Trigger: TGAAGCCGAGACTGGAAGTTTCTCCAGAGGCTCAGCCCAAAGCCAGGCTTCCCTCCCCCGACTCTGCTCTCTTTGCCCCCTTTCCCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 90 bp | GCGATTCTGCTTCACTGGTGTGGTGAGTGTCGGAAGGTGGAGAACTaGGGGAAGAGTATGCGGCGGGAAAGGTCTCAGCGACTGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AILLHWCGECRKVEN*GKSMRRERSQRLRG Trigger: GCCCCTCAGTCGCTGAGACCTTTCCCGCCGCATACTCTTCCCCCAGTTCTCCACCTTCCGACACTCACCACACCAGTGAAGCAGAATCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 90 bp | GATCCGAGGGCTGGTATTTCTAAGGTCTTGAGAAGTCCCAGCAACTaGACCATCCCTCCCCTCGGGGCTCCGGGAACCCTTCATGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DPRAGISKVLRSPSN*TIPPLGAPGTLHEG Trigger: GCCCTCATGAAGGGTTCCCGGAGCCCCGAGGGGAGGGATGGTCCAGTTGCTGGGACTTCTCAAGACCTTAGAAATACCAGCCCTCGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCTTCAGGGTGTACCATaGCTTCTTCCTGCGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSLQGVP*LLPAAL Trigger: CAGGGCCGCAGGAAGAAGCAATGGTACACCCTGAAG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGAAAGACACGCGCTTCTaGCCCTTCTTCTGCCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSKDTRF*PFFCPP Trigger: CGGAGGGCAGAAGAAGGGCAAGAAGCGCGTGTCTTT...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGAAGGCTGGGTACCTCTaGCTGGGCTGGCTTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSKAGYL*LGWLHL Trigger: CAAGTGAAGCCAGCCCAGCAAGAGGTACCCAGCCTT...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS TCA 90 bp | CAGCTGGGCTTCCACGAGCGCGCCTTTCCTCTCCTTCTCTTTCTCTaGGACAGTGGGAAGAGGTTCGCTTTCACTGCCTTTAGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLGFHERAFPLLLFL*DSGKRFAFTAFSRR Trigger: GCGGCGGCTAAAGGCAGTGAAAGCGAACCTCTTCCCACTGTCTCAGAGAAAGAGAAGGAGAGGAAAGGCGCGCTCGTGGAAGCCCAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 90 bp | CTTTCGAGAAGGACTCATCGTCACTGTCGACTGAGGGTGTCACGCTaGGGACGATGGCCGAGGCGGTATCCGAGGCGCTGTCCTTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSRRTHRHCRLRVSR*GRWPRRYPRRCPYS Trigger: AGAATAAGGACAGCGCCTCGGATACCGCCTCGGCCATCGTCCCCAGCGTGACACCCTCAGTCGACAGTGACGATGAGTCCTTCTCGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 90 bp | GCGGAGGAGGACTCATCCTCATGGGCGTCATCGTCCCACTGGGACTaGAAGTCTCCGGCCCGCAACAGAACTTTGTCTGACTTGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AEEDSSSWASSSHWD*KSPARNRTLSDLEV Trigger: CACTTCCAAGTCAGACAAAGTTCTGTTGCGGGCCGGAGACTTCCAGTCCCAGTGGGACGATGACGCCCATGAGGATGAGTCCTCCTCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 90 bp | ACTGCTCTGAGGAGCAAGGAAGGTTTTTCAGCATCGGCCTCACCCTaGCCTGTGGGCCAGGGCTCGACTGGAGTGGATGTGGAGATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TALRSKEGFSASASP*PVGQGSTGVDVEIG Trigger: TCCTATCTCCACATCCACTCCAGTCGAGCCCTGGCCCACAGGCCAGGGTGAGGCCGATGCTGAAAAACCTTCCTTGCTCCTCAGAGCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | CTCTCCCTGTCACCAGCCTCTGCCAGTGGCTCAATGCAGGTTCGGCTTCCCTTGGCCCGCAACAGAACTTaGTCTGACTTGGAAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSPASASGSMQVRLPLARNRT*SDLEVG Trigger: GCCCACTTCCAAGTCAGACAAAGTTCTGTTGCGGGC...CAAGGGAAGCCGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CAA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGTGCCAGCTTCCTTCCTaGTGTCCCCTGACGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSCQLPS*CPLTPL Trigger: AAGAGGCGTCAGGGGACACAAGGAAGGAAGCTGGCA...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCCTGGGCTGGCTTCACTaGTGGGGCCTTCCGGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTLGWLH*WGLPGN Trigger: GTTTCCCGGAAGGCCCCACAAGTGAAGCCAGCCCAG...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS CCA 90 bp | ACTGGGACTGGAAGTCTCCGGCCCGCAACAGAACTTTGTCTGACTTaGAAGTGGGCAGGACAGACATGGACTGGGAGAGGGGCGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGTGSLRPATELCLT*KWAGQTWTGRGASS Trigger: AGAAGACGCCCCTCTCCCAGTCCATGTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTCTGTTGCGGGCCGGAGACTTCCAGTCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGCTTCAGGGTGTACCATaGCTTCTTCCTGCGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRLQGVP*LLPAAL Trigger: CAGGGCCGCAGGAAGAAGCAATGGTACACCCTGAAG...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CAA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGCCCGCAACAGAACTTaGTCTGACTTGGAAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSARNRT*SDLEVG Trigger: GCCCACTTCCAAGTCAGACAAAGTTCTGTTGCGGGC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGACATGCTCTCTCTATaGTCCCCACTGGTCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSDMLSL*SPLVRG Trigger: GCCTCTGACCAGTGGGGACAATAGAGAGAGCATGTC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGGCCCGCAACAGAACTTaGTCTGACTTGGAAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRARNRT*SDLEVG Trigger: GCCCACTTCCAAGTCAGACAAAGTTCTGTTGCGGGC...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
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| CDS-3UTR CAA 90 bp | TCCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCTTGGGAAGGCTGAAGTaGGACTGGTTCGGTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SFPQFTSFRPSCPSAPALLGRLK*DWFGCW Trigger: CCAACAACCGAACCAGTCCAACTTCAGCCTTCCCAA...GAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGAAAGCCCCTCTTTCTaGGGAAGGCTGAAGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSESPSF*GRLKLD Trigger: GTCCAACTTCAGCCTTCCCAAGAAAGAGGGGCTTTC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | ACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGCTCGGCTTCACAGCCTaGGTCTGGGGAACCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGQGCLLLLSVAQVKVIWLGFTA*VWGTLA Trigger: GGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAG...CCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
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| CDS-3UTR CAA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGCAATCTTGGTGGCTGTaGTGTTCATGGGCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSQSWWL*CSWASQ Trigger: CTGTGAAGCCCATGAACACAACAGCCACCAAGATTG...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS TCA 90 bp | GTGGGGCCTTCCGGGAAACACTTGCCTTCAGAAGAAATGTTAGGCTaGGCTTCTGCGGTCACAGGTTCCTGTCCTGTGCCTTCTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGPSGKHLPSEEMLG*ASAVTGSCPVPSVW Trigger: CCACACAGAAGGCACAGGACAGGAACCTGTGACCGCAGAAGCTCAGCCTAACATTTCTTCTGAAGGCAAGTGTTTCCCGGAAGGCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS GCA 90 bp | TGCTGTCTTTTGTCTCTCTGGCAGCCTCCACGTTTGCTGGAGACATaGTCTCTCTATTGTCCCCACTGGTCAGAGGCCGGTAGGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CCLLSLWQPPRLLET*SLYCPHWSEAGRMA Trigger: TGCCATCCTACCGGCCTCTGACCAGTGGGGACAATAGAGAGAGCATGTCTCCAGCAAACGTGGAGGCTGCCAGAGAGACAAAAGACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS GCA 90 bp | GTGAAGCTGGCTTCTCACCTCCTATCAGCTTCTCTTCCTCGACAGTaGCAGGGCCTGGTAGCTCTTCATTCTCACTTGAGCGAACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VKLASHLLSASLPRQ*QGLVALHSHLSEPG Trigger: CCCAGGTTCGCTCAAGTGAGAATGAAGAGCTACCAGGCCCTGGCACTGTCGAGGAAGAGAAGCTGATAGGAGGTGAGAAGCCAGCTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGAGAACTTTGTCTGACTaGGAAGTGGGCAGGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSRTLSD*EVGRTD Trigger: GTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTCT...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CAA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGACTTCATGGAATCCTaGGTGGAAGAGTCGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSDFMES*VEESDS Trigger: ACTGTCCGACTCTTCCACCAAGGATTCCATGAAGTC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CAA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGGTTTCTTGCTGTCTTTaGTCTCTCTGGCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSVSCCL*SLWQPP Trigger: TGGAGGCTGCCAGAGAGACAAAAGACAGCAAGAAAC...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
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| CDS-3UTR CAA 90 bp | ACAGGGCAGGGTTGCTTGCTCCTTCTTTCTGTGGCCCAAGTAAAGGTAATATGGCCCCAGCTCCTGCGCTaGGCAAAGCTGGGGTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TGQGCLLLLSVAQVKVIWPQLLR*AKLGLD Trigger: ATCCAACCCCAGCTTTGCCAAGCGCAGGAGCTGGGG...CCATATTACCTTTACTTGGGCCACAGAAAGAAGGAGCAAGCAACCCTGCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS TCA 90 bp | AGAGCAGGCCTTCATGATCGCTGGCTTTGCTCTGACAGGGAGCCATaGGGTCATCCTTCTCATCCATCAAAGGCTGGGTACCTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAGLHDRWLCSDREP*GHPSHPSKAGYLLL Trigger: CAGCAAGAGGTACCCAGCCTTTGATGGATGAGAAGGATGACCTCATGGCTCCCTGTCAGAGCAAAGCCAGCGATCATGAAGGCCTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS TCA 90 bp | ATGCCACTTCAGGAATGGACGGGAGAGACAAGCTCAGATCAGCTATaGTGGGAGATTTCACATCCGAGGCGGACGGAAGGTCACTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MPLQEWTGETSSDQL*WEISHPRRTEGHSG Trigger: CCCTGAGTGACCTTCCGTCCGCCTCGGATGTGAAATCTCCCATCATAGCTGATCTGAGCTTGTCTCTCCCGTCCATTCCTGAAGTGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CCA 90 bp | CCCGCAACAGAACTTTGTCTGACTTGGAAGTGGGCAGGACAGACATaGACTGGGAGAGGGGCGTCTTCTGCAGACTCGACTTGGAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: PATELCLTWKWAGQT*TGRGASSADSTWKT Trigger: TGTTTTCCAAGTCGAGTCTGCAGAAGACGCCCCTCTCCCAGTCCATGTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTCTGTTGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 90 bp | TTGTTTTTGCGATTCTGCTTCACTGGTGTGGTGAGTGTCGGAAGGTaGAGAACTGGGGGAAGAGTATGCGGCGGGAAAGGTCTCAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: LFLRFCFTGVVSVGR*RTGGRVCGGKGLSD Trigger: GTCGCTGAGACCTTTCCCGCCGCATACTCTTCCCCCAGTTCTCCACCTTCCGACACTCACCACACCAGTGAAGCAGAATCGCAAAAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGAGCACAGGAATTCACTTCACCTAGACGGTCCTCGCTAGAGCTGACTCGGGACATGCTCTCTCTATaGTCCCCACTGGTCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FRAQEFTSPRRSSLELTRDMLSL*SPLVRG Trigger: GCCTCTGACCAGTGGGGACAATAGAGAGAGCATGTC...CCGAGTCAGCTCTAGCGAGGACCGTCTAGGTGAAGTGAATTCCTGTGCTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGGTTTCTTGCTGTCTTTaGTCTCTCTGGCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRVSCCL*SLWQPP Trigger: TGGAGGCTGCCAGAGAGACAAAAGACAGCAAGAAAC...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCGCAGTTTACATCTTTCCGGCCTTCTTGCCCATCTGCGCCGGCACTCGTTGCTCTCCTGTTTCTaGCTGTCTTTTGTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSRSLHLSGLLAHLRRHSLLSCF*LSFVSL Trigger: CAGAGAGACAAAAGACAGCAAGAAACAGGAGAGCAA...CGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACTGCGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS GCA 90 bp | AGCTCTACTAGTGGAGACGTCTGCCGTTGCTTGTTTTTGCGATTCTaGTTCACTGGTGTGGTGAGTGTCGGAAGGTGGAGAACTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSTSGDVCRCLFLRF*FTGVVSVGRWRTGG Trigger: TCCCCCAGTTCTCCACCTTCCGACACTCACCACACCAGTGAAGCAGAATCGCAAAAACAAGCAACGGCAGACGTCTCCACTAGTAGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CCA 90 bp | CAGCCTCCACGTTTGCTGGAGACATGCTCTCTCTATTGTCCCCACTaGTCAGAGGCCGGTAGGATGGCAAAGACATGGACTTCATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QPPRLLETCSLYCPH*SEAGRMAKTWTSWN Trigger: ATTCCATGAAGTCCATGTCTTTGCCATCCTACCGGCCTCTGACCAGTGGGGACAATAGAGAGAGCATGTCTCCAGCAAACGTGGAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCAACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTACTTCAGGGTGTACCATaGCTTCTTCCTGCGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PKPTLTKTTLESSGLPELLQGVP*LLPAAL Trigger: CAGGGCCGCAGGAAGAAGCAATGGTACACCCTGAAG...TAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | ATCTCAGTACACAGTGAGTTCAAGAGCAGCCCCAGCCCGGGGCTACATAACACCAGAACTTTGTCTGACTaGGAAGTGGGCAGGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISVHSEFKSSPSPGLHNTRTLSD*EVGRTD Trigger: GTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTCT...GGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTGTGTACTGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCAATCTTGGTGGCTGTaGTGTTCATGGGCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: AGETAHIPKSLSHLTLSLQSWWL*CSWASQ Trigger: CTGTGAAGCCCATGAACACAACAGCCACCAAGATTG...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | GCGGGTGAAACAGCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGATGGTCTCCTTCTGTTaGAGGACTAGCTGGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGETAHIPKSLSHLTLSLMVSFC*RTSWIS Trigger: GCTGATCCAGCTAGTCCTCAAACAGAAGGAGACCAT...CAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGCTGTTTCACCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCAACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAAAAGACACGCGCTTCTaGCCCTTCTTCTGCCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PKPTLTKTTLESSGLPELKDTRF*PFFCPP Trigger: CGGAGGGCAGAAGAAGGGCAAGAAGCGCGTGTCTTT...TAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS TCA 90 bp | AGAGGGGGCGCTGCTTCTTCCCCTGCTGTAGTCATTCCGCCATCGTaGACATTATCCACAGAAGACACACACTCTGTCATGAGGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RGGAASSPAVVIPPS*TLSTEDTHSVMRVF Trigger: AAAGACCCTCATGACAGAGTGTGTGTCTTCTGTGGATAATGTTCACGATGGCGGAATGACTACAGCAGGGGAAGAAGCAGCGCCCCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS-3UTR CAA 90 bp | GGCACTCGGAGGATGTTGGGGGTCTCCTCCATGACTCTGACTAGCAGGTTGTCGTTCTGCAGACTCGACTaGGAAAACAAAGTCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: GTRRMLGVSSMTLTSRLSFCRLD*ENKVLI Trigger: GATCAAGACTTTGTTTTCCAAGTCGAGTCTGCAGAA...CGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACATCCTCCGAGTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209377.2 |
||
| CDS-3UTR CAA 90 bp | GCACACATCCCAAAGTCCCTTTCTCATCTCACCCTGAGCCTGCCTTCACGGAGGTTGCTCTCCTGTTTCTaGCTGTCTTTTGTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AHIPKSLSHLTLSLPSRRLLSCF*LSFVSL Trigger: CAGAGAGACAAAAGACAGCAAGAAACAGGAGAGCAA...CCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAGGGACTTTGGGATGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTATTTAATCCAACGCCTTCATACCCCACCCAAATCTCTGGCTGGGCTTTCTTGGGAAGGCTGAAGTaGGACTGGTTCGGTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVFNPTPSYPTQISGWAFLGRLK*DWFGCW Trigger: CCAACAACCGAACCAGTCCAACTTCAGCCTTCCCAA...GAAAGCCCAGCCAGAGATTTGGGTGGGGTATGAAGGCGTTGGATTAAATACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | CCCAAACCAACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAGAAAGCCCCTCTTTCTaGGGAAGGCTGAAGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PKPTLTKTTLESSGLPELESPSF*GRLKLD Trigger: GTCCAACTTCAGCCTTCCCAAGAAAGAGGGGCTTTC...TAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCCTCGGCTTCACAGCCTaGGTCTGGGGAACCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVLGFTA*VWGTLA Trigger: GGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAG...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTATTTAATCCAACGCCTTCATACCCCACCCAAATCTCTGGCTGGGCTTTCATGGTCTCCTTCTGTTaGAGGACTAGCTGGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVFNPTPSYPTQISGWAFMVSFC*RTSWIS Trigger: GCTGATCCAGCTAGTCCTCAAACAGAAGGAGACCAT...GAAAGCCCAGCCAGAGATTTGGGTGGGGTATGAAGGCGTTGGATTAAATACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS TCA 90 bp | TTCCGCCATCGTGAACATTATCCACAGAAGACACACACTCTGTCATaGGGGTCTTTCCCGATTCATCACTGCCAGCTTCCTTCCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FRHREHYPQKTHTLS*GSFPIHHCQLPSLC Trigger: ACACAAGGAAGGAAGCTGGCAGTGATGAATCGGGAAAGACCCTCATGACAGAGTGTGTGTCTTCTGTGGATAATGTTCACGATGGCGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS-3UTR CAA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAACCTTCCCCTGGTTCCTaGGGAGAGCGGGCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKPSPGS*GERAAR Trigger: CCTGGCTGCCCGCTCTCCCAAGGAACCAGGGGAAGG...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | AGTGCAAGCACCTTACCCACTGAGCTATATCCCCCAATCCATGGAGAACATATTAGAACTTTGTCTGACTaGGAAGTGGGCAGGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SASTLPTELYPPIHGEHIRTLSD*EVGRTD Trigger: GTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTCT...AATATGTTCTCCATGGATTGGGGGATATAGCTCAGTGGGTAAGGTGCTTGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCGACATGCTCTCTCTATaGTCCCCACTGGTCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVDMLSL*SPLVRG Trigger: GCCTCTGACCAGTGGGGACAATAGAGAGAGCATGTC...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | ACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAAAAATTGAGCAATCTTGGTGGCTGTaGTGTTCATGGGCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TLTKTTLESSGLPELKIEQSWWL*CSWASQ Trigger: CTGTGAAGCCCATGAACACAACAGCCACCAAGATTG...CTCAATTTTTAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | ATGGAGAACATATTTTTAAGGCCAGAGGGTACTGCCAATTGTAAAAGGCATATTAAGGCTGGGTACCTCTaGCTGGGCTGGCTTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: MENIFLRPEGTANCKRHIKAGYL*LGWLHL Trigger: CAAGTGAAGCCAGCCCAGCAAGAGGTACCCAGCCTT...AATATGCCTTTTACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | CAGCAAAGAAGCAGATGCCATCCTGTAGCTCTTCACAACTGTTCCTTACCGCTGTCCTTATTCTTCCCTTaGATCTTGTCCTTCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QQRSRCHPVALHNCSLPLSLFFP*ILSFSF Trigger: AAAACTGAAGGACAAGATCAAAGGGAAGAATAAGGA...CAGCGGTAAGGAACAGTTGTGAAGAGCTACAGGATGGCATCTGCTTCTTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCGTTTCTTGCTGTCTTTaGTCTCTCTGGCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVVSCCL*SLWQPP Trigger: TGGAGGCTGCCAGAGAGACAAAAGACAGCAAGAAAC...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | ATGGAGAACATATTTTTAAGGCCAGAGGGTACTGCCAATTGTAAAAGGCATATTTTGGGAAGGCTGAAGTaGGACTGGTTCGGTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: MENIFLRPEGTANCKRHILGRLK*DWFGCW Trigger: CCAACAACCGAACCAGTCCAACTTCAGCCTTCCCAA...AATATGCCTTTTACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | AGGCAGGAGGATAATGAGTTCAAGGTCATTAATAGCCATAAAATCAAGATTAACGAAAGCCCCTCTTTCTaGGGAAGGCTGAAGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RQEDNEFKVINSHKIKINESPSF*GRLKLD Trigger: GTCCAACTTCAGCCTTCCCAAGAAAGAGGGGCTTTC...GTTAATCTTGATTTTATGGCTATTAATGACCTTGAACTCATTATCCTCCTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | ATGGAGAACATATTTTTAAGGCCAGAGGGTACTGCCAATTGTAAAAGGCATATTGACTTCATGGAATCCTaGGTGGAAGAGTCGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: MENIFLRPEGTANCKRHIDFMES*VEESDS Trigger: ACTGTCCGACTCTTCCACCAAGGATTCCATGAAGTC...AATATGCCTTTTACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | ACCCTCACCAAAACAACCCTTGAGTCCTCGGGTTTACCCGAATTAAAAATTGAGTCCTTATTCTTCCCTTaGATCTTGTCCTTCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLTKTTLESSGLPELKIESLFFP*ILSFSF Trigger: AAAACTGAAGGACAAGATCAAAGGGAAGAATAAGGA...CTCAATTTTTAATTCGGGTAAACCCGAGGACTCAAGGGTTGTTTTGGTGAGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | TTAATGTTATGTGTATTGATATTTTGTCTGCATGGATGTCCGGGTGACACGGTCTTCTGCAGACTCGACTaGGAAAACAAAGTCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LMLCVLIFCLHGCPGDTVFCRLD*ENKVLI Trigger: GATCAAGACTTTGTTTTCCAAGTCGAGTCTGCAGAA...GACCGTGTCACCCGGACATCCATGCAGACAAAATATCAATACACATAACATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAAGACTTCATGGAATCCTaGGTGGAAGAGTCGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKDFMES*VEESDS Trigger: ACTGTCCGACTCTTCCACCAAGGATTCCATGAAGTC...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | ATGGAGAACATATTTTTAAGGCCAGAGGGTACTGCCAATTGTAAAAGGCATATTTTGCTCTCCTGTTTCTaGCTGTCTTTTGTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MENIFLRPEGTANCKRHILLSCF*LSFVSL Trigger: CAGAGAGACAAAAGACAGCAAGAAACAGGAGAGCAA...AATATGCCTTTTACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS-3UTR CAA 90 bp | AACCCTGGCGTTAAAACACATCGGATCAAATCTGATATTTACAATGTAGTCAAATTCTGCAGACTCGACTaGGAAAACAAAGTCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: NPGVKTHRIKSDIYNVVKFCRLD*ENKVLI Trigger: GATCAAGACTTTGTTTTCCAAGTCGAGTCTGCAGAA...TTTGACTACATTGTAAATATCAGATTTGATCCGATGTGTTTTAACGCCAGGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 |
||
| CDS CCA 72 bp | GACTTCAGGGTGTACCATTGCTTCTTCCTGCGGCCCTaGTCCCGGTGCAGCTCCCGCAGGTCCACCTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: DFRVYHCFFLRP*SRCSSRRSTSA Trigger: CGCCGAGGTGGACCTGCGGGAGCTGCACCGGGACCAGGGCCGCAGGAAGAAGCAATGGTACACCCTGAAGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CCA 72 bp | AGCCTTGGTCTGGGGAACCCTGGCCGCAGGAACTGGTaGTTTCGGTTCCGACCTGGACTCCGTGGTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLGLGNPGRRNW*FRFRPGLRGGS Trigger: GGAGCCACCACGGAGTCCAGGTCGGAACCGAAACCACCAGTTCCTGCGGCCAGGGTTCCCCAGACCAAGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CCA 72 bp | GAGGCCTCGGCTTCACAGCCTTGGTCTGGGGAACCCTaGCCGCAGGAACTGGTGGTTTCGGTTCCGACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EASASQPWSGEP*PQELVVSVPTW Trigger: CCAGGTCGGAACCGAAACCACCAGTTCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAGGCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033878.14 |
||
| CDS GCA 72 bp | GACCTGGACTCCGTGGTGGCTCCCGGGTCTGAGATCTaGACGTCCTCAAAGGGGTTCAAGGAGCTGCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DLDSVVAPGSEI*TSSKGFKELPH Trigger: GTGGGGCAGCTCCTTGAACCCCTTTGAGGACGTGCAGATCTCAGACCCGGGAGCCACCACGGAGTCCAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS GCA 72 bp | GTTCATGGGCTTCACAGGGTGAGGCCTGTGCTTGGCTaGCCCAGCTCCTGCGCTTGGCAAAGCTGGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VHGLHRVRPVLG*PSSCAWQSWGW Trigger: CCAACCCCAGCTTTGCCAAGCGCAGGAGCTGGGGCAGCCAAGCACAGGCCTCACCCTGTGAAGCCCATGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CCA 72 bp | AGGACTCATCGTCACTGTCGACTGAGGGTGTCACGCTaGGGACGATGGCCGAGGCGGTATCCGAGGCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RTHRHCRLRVSR*GRWPRRYPRRC Trigger: ACAGCGCCTCGGATACCGCCTCGGCCATCGTCCCCAGCGTGACACCCTCAGTCGACAGTGACGATGAGTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CCA 72 bp | CCAGTCTCGGCTTCACAGCCTTGGTCTGGGGAACCCTaGCCGCAGGAACTGGTGGTTTCGGTTCCGACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PVSASQPWSGEP*PQELVVSVPTW Trigger: CCAGGTCGGAACCGAAACCACCAGTTCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAGACTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS TCA 72 bp | CGGTTCCGACCTGGACTCCGTGGTGGCTCCCGGGTCTaGGATCTGCACGTCCTCAAAGGGGTTCAAGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RFRPGLRGGSRV*DLHVLKGVQGA Trigger: AGCTCCTTGAACCCCTTTGAGGACGTGCAGATCTCAGACCCGGGAGCCACCACGGAGTCCAGGTCGGAACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS GCA 72 bp | TGGTGGAAGAGTCGGACAGTCGCCTGTCAGAAGATGTaGCGCCTCCTTCCCCTGGTTCCTTGGGAGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: WWKSRTVACQKM*RLLPLVPWESG Trigger: CCCGCTCTCCCAAGGAACCAGGGGAAGGAGGCGGCACATCTTCTGACAGGCGACTGTCCGACTCTTCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CCA 72 bp | CGTCACTGTCGACTGAGGGTGTCACGCTGGGGACGATaGCCGAGGCGGTATCCGAGGCGCTGTCCTTATTCT | + |
|
Preference number: 6 (lower is better) Translates to: RHCRLRVSRWGR*PRRYPRRCPYS Trigger: AGAATAAGGACAGCGCCTCGGATACCGCCTCGGCCATCGTCCCCAGCGTGACACCCTCAGTCGACAGTGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CCA 72 bp | CAGTCGCCTGTCAGAAGATGTGCCGCCTCCTTCCCCTaGTTCCTTGGGAGAGCGGGCAGCCAGGTTTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QSPVRRCAASFP*FLGRAGSQVFS Trigger: ACTGAAAACCTGGCTGCCCGCTCTCCCAAGGAACCAGGGGAAGGAGGCGGCACATCTTCTGACAGGCGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | AGGAGCAAGGAAGGTTTTTCAGCATCGGCCTCACCCTaGCCTGTGGGCCAGGGCTCGACTGGAGTGGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSKEGFSASASP*PVGQGSTGVDV Trigger: CACATCCACTCCAGTCGAGCCCTGGCCCACAGGCCAGGGTGAGGCCGATGCTGAAAAACCTTCCTTGCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CAA 72 bp | CTGTCAGAAGATGTGCCGCCTCCTTCCCCTGGTTCCTaGGGAGAGCGGGCAGCCAGGTTTTCAGTGGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSEDVPPPSPGS*GERAARFSVDE Trigger: CTCGTCCACTGAAAACCTGGCTGCCCGCTCTCCCAAGGAACCAGGGGAAGGAGGCGGCACATCTTCTGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CAA 72 bp | GCCTCTGGAGAAACTTCCAGTCTCGGCTTCACAGCCTaGGTCTGGGGAACCCTGGCCGCAGGAACTGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASGETSSLGFTA*VWGTLAAGTGG Trigger: ACCACCAGTTCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAGACTGGAAGTTTCTCCAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS TCA 72 bp | CGATTCATCACTGCCAGCTTCCTTCCTTGTGTCCCCTaGCGCCTCTTCCGTCCCCTTCCGCACAGGTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RFITASFLPCVP*RLFRPLPHRCR Trigger: CCTACACCTGTGCGGAAGGGGACGGAAGAGGCGTCAGGGGACACAAGGAAGGAAGCTGGCAGTGATGAATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | GAGGAGGACTCATCCTCATGGGCGTCATCGTCCCACTaGGACTGGAAGTCTCCGGCCCGCAACAGAACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: EEDSSSWASSSH*DWKSPARNRTL Trigger: CAAAGTTCTGTTGCGGGCCGGAGACTTCCAGTCCCAGTGGGACGATGACGCCCATGAGGATGAGTCCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | GGAGAAACTTCCAGTCTCGGCTTCACAGCCTTGGTCTaGGGAACCCTGGCCGCAGGAACTGGTGGTTTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GETSSLGFTALV*GTLAAGTGGFG Trigger: ACCGAAACCACCAGTTCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAGACTGGAAGTTTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | CCTCTGGAGAAACTTCCAGTCTCGGCTTCACAGCCTTaGTCTGGGGAACCCTGGCCGCAGGAACTGGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PLEKLPVSASQP*SGEPWPQELVV Trigger: AACCACCAGTTCCTGCGGCCAGGGTTCCCCAGACCAAGGCTGTGAAGCCGAGACTGGAAGTTTCTCCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CAA 90 bp | ATGTCGACCTCGATTTCCCCGCGCTCTTTGTCCTTCTTCCCGGGTTaGGACTTCAGGGTGTACCATTGCTTCTTCCTGCGGCCCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MSTSISPRSLSFFPG*DFRVYHCFFLRPWS Trigger: GGACCAGGGCCGCAGGAAGAAGCAATGGTACACCCTGAAGTCCAAACCCGGGAAGAAGGACAAAGAGCGCGGGGAAATCGAGGTCGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CAA 90 bp | TCATCGTCCCACTGGGACTGGAAGTCTCCGGCCCGCAACAGAACTTaGTCTGACTTGGAAGTGGGCAGGACAGACATGGACTGGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSHWDWKSPARNRT*SDLEVGRTDMDWER Trigger: CCTCTCCCAGTCCATGTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTCTGTTGCGGGCCGGAGACTTCCAGTCCCAGTGGGACGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | GGAAGTCTCCGGCCCGCAACAGAACTTTGTCTGACTTaGAAGTGGGCAGGACAGACATGGACTGGGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSLRPATELCLT*KWAGQTWTGRG Trigger: CCCTCTCCCAGTCCATGTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTCTGTTGCGGGCCGGAGACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | GACTCATCCTCATGGGCGTCATCGTCCCACTGGGACTaGAAGTCTCCGGCCCGCAACAGAACTTTGTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DSSSWASSSHWD*KSPARNRTLSD Trigger: GTCAGACAAAGTTCTGTTGCGGGCCGGAGACTTCCAGTCCCAGTGGGACGATGACGCCCATGAGGATGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | CTTCACTGGTGTGGTGAGTGTCGGAAGGTGGAGAACTaGGGGAAGAGTATGCGGCGGGAAAGGTCTCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LHWCGECRKVEN*GKSMRRERSQR Trigger: TCGCTGAGACCTTTCCCGCCGCATACTCTTCCCCCAGTTCTCCACCTTCCGACACTCACCACACCAGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS TCA 72 bp | GGACTGGAAGTCTCCGGCCCGCAACAGAACTTTGTCTaGCTTGGAAGTGGGCAGGACAGACATGGACTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLEVSGPQQNFV*LGSGQDRHGLG Trigger: TCCCAGTCCATGTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTCTGTTGCGGGCCGGAGACTTCCAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS TCA 72 bp | CCCCTTCCGCACAGGTGTAGGAAGTTGTTCACAAGGTaGTCCCGAGGCAGAAGAACCAGTGTTTGCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PLPHRCRKLFTR*SRGRRTSVCSR Trigger: CCGGCTGCAAACACTGGTTCTTCTGCCTCGGGATCACCTTGTGAACAACTTCCTACACCTGTGCGGAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS GCA 72 bp | TTGTCTCTCTGGCAGCCTCCACGTTTGCTGGAGACATaGTCTCTCTATTGTCCCCACTGGTCAGAGGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSLWQPPRLLET*SLYCPHWSEAG Trigger: ACCGGCCTCTGACCAGTGGGGACAATAGAGAGAGCATGTCTCCAGCAAACGTGGAGGCTGCCAGAGAGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | TCTCATCCATCAAAGGCTGGGTACCTCTTGCTGGGCTaGCTTCACTTGTGGGGCCTTCCGGGAAACACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SHPSKAGYLLLG*LHLWGLPGNTC Trigger: GCAAGTGTTTCCCGGAAGGCCCCACAAGTGAAGCCAGCCCAGCAAGAGGTACCCAGCCTTTGATGGATGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | GGAGCCATGAGGTCATCCTTCTCATCCATCAAAGGCTaGGTACCTCTTGCTGGGCTGGCTTCACTTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAMRSSFSSIKG*VPLAGLASLVG Trigger: CCCCACAAGTGAAGCCAGCCCAGCAAGAGGTACCCAGCCTTTGATGGATGAGAAGGATGACCTCATGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CAA 72 bp | CACTGGGACTGGAAGTCTCCGGCCCGCAACAGAACTTaGTCTGACTTGGAAGTGGGCAGGACAGACATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: HWDWKSPARNRT*SDLEVGRTDMD Trigger: GTCCATGTCTGTCCTGCCCACTTCCAAGTCAGACAAAGTTCTGTTGCGGGCCGGAGACTTCCAGTCCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CAA 72 bp | TCAAAGGCTGGGTACCTCTTGCTGGGCTGGCTTCACTaGTGGGGCCTTCCGGGAAACACTTGCCTTCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SKAGYLLLGWLH*WGLPGNTCLQK Trigger: CTTCTGAAGGCAAGTGTTTCCCGGAAGGCCCCACAAGTGAAGCCAGCCCAGCAAGAGGTACCCAGCCTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS TCA 72 bp | TTCTCACTTGAGCGAACCTGGGGCCTGAAGTCACACTaGTTCTCTGTGGGCACTGATTCACCTGCCCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSLERTWGLKSH*FSVGTDSPALP Trigger: TGGCAGGGCAGGTGAATCAGTGCCCACAGAGAATCAGTGTGACTTCAGGCCCCAGGTTCGCTCAAGTGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS TCA 72 bp | GCTGGGCACAGAAGAGTCCTGGGATACGCACAGAGGTaGAGCTGGCTTCTCACCTCCTATCAGCTTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AGHRRVLGYAQR*SWLLTSYQLLF Trigger: GAAGAGAAGCTGATAGGAGGTGAGAAGCCAGCTTCACCTCTGTGCGTATCCCAGGACTCTTCTGTGCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS GCA 72 bp | CTGAGATCTGCACGTCCTCAAAGGGGTTCAAGGAGCTaGCCCACTGGGAGGCAACAGGTAGAGCATCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LRSARPQRGSRS*PTGRQQVEHLS Trigger: AGAAAGATGCTCTACCTGTTGCCTCCCAGTGGGGCAGCTCCTTGAACCCCTTTGAGGACGTGCAGATCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS GCA 72 bp | TGGCATTCTGATGCATCCCCTCGTGTTTCTGTGCGATaGGGTGAAACGAGGAGGCCTCGTCCTCTAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WHSDASPRVSVR*GETRRPRPLEE Trigger: CTCTTCTAGAGGACGAGGCCTCCTCGTTTCACCGCATCGCACAGAAACACGAGGGGATGCATCAGAATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | CGTCTGCCGTTGCTTGTTTTTGCGATTCTGCTTCACTaGTGTGGTGAGTGTCGGAAGGTGGAGAACTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLPLLVFAILLH*CGECRKVENWG Trigger: CCCCCAGTTCTCCACCTTCCGACACTCACCACACCAGTGAAGCAGAATCGCAAAAACAAGCAACGGCAGACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CAA 72 bp | TCGATTTCCCCGCGCTCTTTGTCCTTCTTCCCGGGTTaGGACTTCAGGGTGTACCATTGCTTCTTCCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SISPRSLSFFPG*DFRVYHCFFLR Trigger: CCGCAGGAAGAAGCAATGGTACACCCTGAAGTCCAAACCCGGGAAGAAGGACAAAGAGCGCGGGGAAATCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS TCA 72 bp | CCCCAAGGAAGGAAAGCCCCTCTTTCTTGGGAAGGCTaGAGTTGGACTGGTTCGGTTGTTGGTCTGTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: PQGRKAPLSWEG*SWTGSVVGLYW Trigger: CCAGTACAGACCAACAACCGAACCAGTCCAACTTCAGCCTTCCCAAGAAAGAGGGGCTTTCCTTCCTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS TCA 72 bp | CAGGAATGGACGGGAGAGACAAGCTCAGATCAGCTATaGTGGGAGATTTCACATCCGAGGCGGACGGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QEWTGETSSDQL*WEISHPRRTEG Trigger: ACCTTCCGTCCGCCTCGGATGTGAAATCTCCCATCATAGCTGATCTGAGCTTGTCTCTCCCGTCCATTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS GCA 72 bp | GCTTCTCACCTCCTATCAGCTTCTCTTCCTCGACAGTaGCAGGGCCTGGTAGCTCTTCATTCTCACTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASHLLSASLPRQ*QGLVALHSHLS Trigger: GCTCAAGTGAGAATGAAGAGCTACCAGGCCCTGGCACTGTCGAGGAAGAGAAGCTGATAGGAGGTGAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | CGTTTGCTGGAGACATGCTCTCTCTATTGTCCCCACTaGTCAGAGGCCGGTAGGATGGCAAAGACATGGACT | + |
|
Preference number: 6 (lower is better) Translates to: RLLETCSLYCPH*SEAGRMAKTWT Trigger: AGTCCATGTCTTTGCCATCCTACCGGCCTCTGACCAGTGGGGACAATAGAGAGAGCATGTCTCCAGCAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CCA 72 bp | GCTGTCTTTTGTCTCTCTGGCAGCCTCCACGTTTGCTaGAGACATGCTCTCTCTATTGTCCCCACTGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVFCLSGSLHVC*RHALSIVPTGQ Trigger: CTGACCAGTGGGGACAATAGAGAGAGCATGTCTCCAGCAAACGTGGAGGCTGCCAGAGAGACAAAAGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS CAA 90 bp | TCTCCTGTTTCTTGCTGTCTTTTGTCTCTCTGGCAGCCTCCACGTTaGCTGGAGACATGCTCTCTCTATTGTCCCCACTGGTCAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPVSCCLLSLWQPPR*LETCSLYCPHWSEA Trigger: GGCCTCTGACCAGTGGGGACAATAGAGAGAGCATGTCTCCAGCAAACGTGGAGGCTGCCAGAGAGACAAAAGACAGCAAGAAACAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS TCA 72 bp | TTCCACGAGCGCGCCTTTCCTCTCCTTCTCTTTCTCTaGGACAGTGGGAAGAGGTTCGCTTTCACTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FHERAFPLLLFL*DSGKRFAFTAF Trigger: AAAGGCAGTGAAAGCGAACCTCTTCCCACTGTCTCAGAGAAAGAGAAGGAGAGGAAAGGCGCGCTCGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS TCA 72 bp | TCCGGGAAACACTTGCCTTCAGAAGAAATGTTAGGCTaGGCTTCTGCGGTCACAGGTTCCTGTCCTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SGKHLPSEEMLG*ASAVTGSCPVP Trigger: AGGCACAGGACAGGAACCTGTGACCGCAGAAGCTCAGCCTAACATTTCTTCTGAAGGCAAGTGTTTCCCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS TCA 72 bp | CTTCATGATCGCTGGCTTTGCTCTGACAGGGAGCCATaGGGTCATCCTTCTCATCCATCAAAGGCTGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LHDRWLCSDREP*GHPSHPSKAGY Trigger: GTACCCAGCCTTTGATGGATGAGAAGGATGACCTCATGGCTCCCTGTCAGAGCAAAGCCAGCGATCATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS GCA 72 bp | CTTGCTGTCTTTTGTCTCTCTGGCAGCCTCCACGTTTaGTGGAGACATGCTCTCTCTATTGTCCCCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LAVFCLSGSLHV*WRHALSIVPTG Trigger: ACCAGTGGGGACAATAGAGAGAGCATGTCTCCAGCAAACGTGGAGGCTGCCAGAGAGACAAAAGACAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS GCA 72 bp | AGTGGAGACGTCTGCCGTTGCTTGTTTTTGCGATTCTaGTTCACTGGTGTGGTGAGTGTCGGAAGGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGDVCRCLFLRF*FTGVVSVGRWR Trigger: TCTCCACCTTCCGACACTCACCACACCAGTGAAGCAGAATCGCAAAAACAAGCAACGGCAGACGTCTCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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| CDS TCA 72 bp | AGAGGAGGCAGAAGGACTTTCAGAGAACTGTGTCTCTaGGTCACATCTCAAGTCGGAAAGGACAGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGGRRTFRELCL*VTSQVGKDRRL Trigger: CAGCCTCCTGTCCTTTCCGACTTGAGATGTGACTCAGAGACACAGTTCTCTGAAAGTCCTTCTGCCTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS TCA 72 bp | GTAGCTCTTCATTCTCACTTGAGCGAACCTGGGGCCTaGAGTCACACTGATTCTCTGTGGGCACTGATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VALHSHLSEPGA*SHTDSLWALIH Trigger: GTGAATCAGTGCCCACAGAGAATCAGTGTGACTTCAGGCCCCAGGTTCGCTCAAGTGAGAATGAAGAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS GCA 72 bp | CCACAAAAAGCTGTTCAGAAAAAGACACGCGCTTCTTaGCCTTCTTCTGCCCTCCGCTGGCATTCTGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: PQKAVQKKTRAS*PSSALRWHSDA Trigger: TGCATCAGAATGCCAGCGGAGGGCAGAAGAAGGGCAAGAAGCGCGTGTCTTTTTCTGAACAGCTTTTTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS GCA 72 bp | TCCATCTCCAACCTCATCGACTCTTTCATCATCCGATaGCACTTCAGGAATGGACGGGAGAGACAAGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SISNLIDSFIIR*HFRNGRERQAQ Trigger: CTGAGCTTGTCTCTCCCGTCCATTCCTGAAGTGGCATCGGATGATGAAAGAGTCGATGAGGTTGGAGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CAA 72 bp | AGCTCTACTAGTGGAGACGTCTGCCGTTGCTTGTTTTaGCGATTCTGCTTCACTGGTGTGGTGAGTGTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSTSGDVCRCLF*RFCFTGVVSVG Trigger: TCCGACACTCACCACACCAGTGAAGCAGAATCGCAAAAACAAGCAACGGCAGACGTCTCCACTAGTAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS TCA 72 bp | GCTGCTTCTTCCCCTGCTGTAGTCATTCCGCCATCGTaGACATTATCCACAGAAGACACACACTCTGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: AASSPAVVIPPS*TLSTEDTHSVM Trigger: CATGACAGAGTGTGTGTCTTCTGTGGATAATGTTCACGATGGCGGAATGACTACAGCAGGGGAAGAAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CAA 90 bp | AAAATTCTCAGCTCTACTAGTGGAGACGTCTGCCGTTGCTTGTTTTaGCGATTCTGCTTCACTGGTGTGGTGAGTGTCGGAAGGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KILSSTSGDVCRCLF*RFCFTGVVSVGRWR Trigger: TCTCCACCTTCCGACACTCACCACACCAGTGAAGCAGAATCGCAAAAACAAGCAACGGCAGACGTCTCCACTAGTAGAGCTGAGAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS TCA 72 bp | CGTGAACATTATCCACAGAAGACACACACTCTGTCATaGGGGTCTTTCCCGATTCATCACTGCCAGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: REHYPQKTHTLS*GSFPIHHCQLP Trigger: AGGAAGCTGGCAGTGATGAATCGGGAAAGACCCTCATGACAGAGTGTGTGTCTTCTGTGGATAATGTTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CAA 72 bp | CTCTTTCTTGGGAAGGCTGAAGTTGGACTGGTTCGGTaGTTGGTCTGTACTGGATGTTCGCTTGTGAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: LFLGKAEVGLVR*LVCTGCSLVRH Trigger: ATGTCTCACAAGCGAACATCCAGTACAGACCAACAACCGAACCAGTCCAACTTCAGCCTTCCCAAGAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033878.14 ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CAA 72 bp | ATTCTCAGCTCTACTAGTGGAGACGTCTGCCGTTGCTaGTTTTTGCGATTCTGCTTCACTGGTGTGGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ILSSTSGDVCRC*FLRFCFTGVVS Trigger: ACTCACCACACCAGTGAAGCAGAATCGCAAAAACAAGCAACGGCAGACGTCTCCACTAGTAGAGCTGAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
||
| CDS CAA 72 bp | GAGGGTGTAACCCAGGCTTGTAGAAGTGGCTTCTTCTaGCCAAAATTCTCAGCTCTACTAGTGGAGACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: EGVTQACRSGFF*PKFSALLVETS Trigger: AGACGTCTCCACTAGTAGAGCTGAGAATTTTGGCAAGAAGAAGCCACTTCTACAAGCCTGGGTTACACCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054212.7 ENSMUST00000209377.2 |
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