Pregenerated sensors for R3HCC1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025184Ensembl transcript IDs: ENSMUST00000026188.10, ENSMUST00000160107.2, ENSMUST00000160893.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGCTCTAAGCTGTCCGGCGGCTCGGCCCATCACTGTACTGCATaGTCTGGGCCTGCTTGCCAAGCCCCTCTGGCACAGGCTAAGATC | + |
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Preference number: 1 (lower is better) Translates to: GGSKLSGGSAHHCTA*SGPACQAPLAQAKI Trigger: GATCTTAGCCTGTGCCAGAGGGGCTTGGCAAGCAGGCCCAGACCATGCAGTACAGTGATGGGCCGAGCCGCCGGACAGCTTAGAGCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR GCA 90 bp | TCCGGCGGCTCGGCCCATCACTGTACTGCATGGTCTGGGCCTGCTTaGCAAGCCCCTCTGGCACAGGCTAAGATCGTACCAAGAACACAC | + |
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Preference number: 1 (lower is better) Translates to: SGGSAHHCTAWSGPA*QAPLAQAKIVPRTH Trigger: GTGTGTTCTTGGTACGATCTTAGCCTGTGCCAGAGGGGCTTGGCAAGCAGGCCCAGACCATGCAGTACAGTGATGGGCCGAGCCGCCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR TCA 90 bp | CTCTCCCTGTCTTACTGCTGCCCCTCATCCTGCAGTTCTCAACTCTaGGAAGTACTAAGGAGCGCCCTGCCCTGCCACGGACCTCCGACT | + |
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Preference number: 1 (lower is better) Translates to: LSLSYCCPSSCSSQL*EVLRSALPCHGPPT Trigger: AGTCGGAGGTCCGTGGCAGGGCAGGGCGCTCCTTAGTACTTCTCAGAGTTGAGAACTGCAGGATGAGGGGCAGCAGTAAGACAGGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 90 bp | CCCATCACTGTACTGCATGGTCTGGGCCTGCTTGCCAAGCCCCTCTaGCACAGGCTAAGATCGTACCAAGAACACACTGGGAGCCAGACG | + |
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Preference number: 1 (lower is better) Translates to: PITVLHGLGLLAKPL*HRLRSYQEHTGSQT Trigger: CGTCTGGCTCCCAGTGTGTTCTTGGTACGATCTTAGCCTGTGCCAGAGGGGCTTGGCAAGCAGGCCCAGACCATGCAGTACAGTGATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR GCA 90 bp | GCCCCAAGCTTAGTACACACTCAGGAACAAACACCCACGATGCGCTaGGGTTCAGGGGCTCTGGAGTTCTGGGCCAGCAGTGTAGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: APSLVHTQEQTPTMR*GSGALEFWASSVVS Trigger: AGAGACTACACTGCTGGCCCAGAACTCCAGAGCCCCTGAACCGCAGCGCATCGTGGGTGTTTGTTCCTGAGTGTGTACTAAGCTTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 90 bp | TGCCAAGCCCCTCTGGCACAGGCTAAGATCGTACCAAGAACACACTaGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTTGACGGCTATG | + |
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Preference number: 1 (lower is better) Translates to: CQAPLAQAKIVPRTH*EPDVSCRVSDLTAM Trigger: CATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTTGGTACGATCTTAGCCTGTGCCAGAGGGGCTTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR TCA 90 bp | GTACAGAGCCTCTGGAAAGGCAAGCCTGGAGTGAAGAAACAATGCTaGAGAACTGTGACAGAGCTCCAGCCGGGACTAGCAAGAGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: VQSLWKGKPGVKKQC*RTVTELQPGLARGA Trigger: TGCCCCTCTTGCTAGTCCCGGCTGGAGCTCTGTCACAGTTCTTCAGCATTGTTTCTTCACTCCAGGCTTGCCTTTCCAGAGGCTCTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR GCA 90 bp | ACTAAGGAGCGCCCTGCCCTGCCACGGACCTCCGACTCCTATCACTaGAGGCTTGAATCCTGTTTTGCTTTACATTTGCTTCAGACTTCC | + |
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Preference number: 1 (lower is better) Translates to: TKERPALPRTSDSYH*RLESCFALHLLQTS Trigger: GGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGGAGTCGGAGGTCCGTGGCAGGGCAGGGCGCTCCTTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 90 bp | TGCAGGCTTGAATCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTaGAGGCCTGACCCACATGAAGATGACCTGCTCCACCCAGGACGC | + |
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Preference number: 1 (lower is better) Translates to: CRLESCFALHLLQTS*RPDPHEDDLLHPGR Trigger: GCGTCCTGGGTGGAGCAGGTCATCTTCATGTGGGTCAGGCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| 3UTR TCA 90 bp | CAAGAACACACTGGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTTaGCGGCTATGGAAAAACAACGCAAGAGGTTGGAGGGAAGATGCA | + |
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Preference number: 1 (lower is better) Translates to: QEHTGSQTFPAGCQI*RLWKNNARGWREDA Trigger: TGCATCTTCCCTCCAACCTCTTGCGTTGTTTTTCCATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR GCA 90 bp | CAGGCTAAGATCGTACCAAGAACACACTGGGAGCCAGACGTTTCCTaGAGGGTGTCAGATTTGACGGCTATGGAAAAACAACGCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: QAKIVPRTHWEPDVS*RVSDLTAMEKQRKR Trigger: CCTCTTGCGTTGTTTTTCCATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTTGGTACGATCTTAGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 90 bp | ACATATGGAAGGTGGCACTGTACAGAGCCTCTGGAAAGGCAAGCCTaGAGTGAAGAAACAATGCTGAAGAACTGTGACAGAGCTCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: TYGRWHCTEPLERQA*SEETMLKNCDRAPA Trigger: GGCTGGAGCTCTGTCACAGTTCTTCAGCATTGTTTCTTCACTCCAGGCTTGCCTTTCCAGAGGCTCTGTACAGTGCCACCTTCCATATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR TCA 90 bp | GCAGGTCAGGACTCAGAGCCAAGGCCAGGGTCATCGAGGGATATTTaGAGAGCCCCATTCTACCACGTTCTAGACAAAGCTAATAATCCA | + |
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Preference number: 1 (lower is better) Translates to: AGQDSEPRPGSSRDI*RAPFYHVLDKANNP Trigger: TGGATTATTAGCTTTGTCTAGAACGTGGTAGAATGGGGCTCTTCAAATATCCCTCGATGACCCTGGCCTTGGCTCTGAGTCCTGACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR GCA 90 bp | CCGACTCCTATCACTGCAGGCTTGAATCCTGTTTTGCTTTACATTTaGTTCAGACTTCCTGGAGGCCTGACCCACATGAAGATGACCTGC | + |
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Preference number: 1 (lower is better) Translates to: PTPITAGLNPVLLYI*FRLPGGLTHMKMTC Trigger: GCAGGTCATCTTCATGTGGGTCAGGCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGGAGTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 90 bp | CTTGAGCAGAAACAGAGGACCAAGAAAACAATGCTTTCCCACATATaGAAGGTGGCACTGTACAGAGCCTCTGGAAAGGCAAGCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: LEQKQRTKKTMLSHI*KVALYRASGKASLE Trigger: CTCCAGGCTTGCCTTTCCAGAGGCTCTGTACAGTGCCACCTTCCATATGTGGGAAAGCATTGTTTTCTTGGTCCTCTGTTTCTGCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR TCA 90 bp | CTCCACCCAGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACATaGCAGTTCCTTTTAACGTCTCTGTCACAGTGGACAGGTCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: LHPGRLEATSIFLPT*QFLLTSLSQWTGLN Trigger: ATTCAGACCTGTCCACTGTGACAGAGACGTTAAAAGGAACTGTCATGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCTGGGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| 3UTR TCA 90 bp | GTATTCACTGCTCAAACAGAGCAGAGCGAGCAGAGTGAACACAGCTaGAGACTTGAGCAGAAACAGAGGACCAAGAAAACAATGCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: VFTAQTEQSEQSEHS*RLEQKQRTKKTMLS Trigger: GGAAAGCATTGTTTTCTTGGTCCTCTGTTTCTGCTCAAGTCTTCAGCTGTGTTCACTCTGCTCGCTCTGCTCTGTTTGAGCAGTGAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 90 bp | TTGTTCATGTTTTCTTTAACATGCTCATCTGCATGTGCACAGCTCTaGAAAGATCCTCTTGTCTCAAGAATATCAACCACTTCCCAATCA | + |
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Preference number: 1 (lower is better) Translates to: LFMFSLTCSSACAQL*KDPLVSRISTTSQS Trigger: TGATTGGGAAGTGGTTGATATTCTTGAGACAAGAGGATCTTTCCAGAGCTGTGCACATGCAGATGAGCATGTTAAAGAAAACATGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGCAAGAGGGGCAGGTCAGGACTCAGAGCCAAGGCCAGGGTCATCGAGGGATTGCAGTTCTCAACTCTaGGAAGTACTAAGGAGCGCC | + |
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Preference number: 2 (lower is better) Translates to: LARGAGQDSEPRPGSSRDCSSQL*EVLRSA Trigger: GGCGCTCCTTAGTACTTCTCAGAGTTGAGAACTGCA...ATCCCTCGATGACCCTGGCCTTGGCTCTGAGTCCTGACCTGCCCCTCTTGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR GCA 90 bp | AAGAACACACTGGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTTGACGGCTATACACCCACGATGCGCTaGGGTTCAGGGGCTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: KNTLGARRFLQGVRFDGYTPTMR*GSGALE Trigger: CTCCAGAGCCCCTGAACCGCAGCGCATCGTGGGTGT...ATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR GCA 90 bp | GGCCCATCACTGTACTGCATGGTCTGGGCCTGCTTGCCAAGCCCCTCTGGCACATCCGACTCCTATCACTaGAGGCTTGAATCCTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: GPSLYCMVWACLPSPSGTSDSYH*RLESCF Trigger: AAAACAGGATTCAAGCCTGCAGTGATAGGAGTCGGA...TGTGCCAGAGGGGCTTGGCAAGCAGGCCCAGACCATGCAGTACAGTGATGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTTGCCAAGCCCCTCTGGCACAGGCTAAGATCGTACCAAGAACACACTGGTCCCTGTCTTACTGCTaGCCCTCATCCTGCAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: PACQAPLAQAKIVPRTHWSLSYC*PSSCSS Trigger: AGAACTGCAGGATGAGGGGCAGCAGTAAGACAGGGA...CCAGTGTGTTCTTGGTACGATCTTAGCCTGTGCCAGAGGGGCTTGGCAAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR GCA 90 bp | GTACCAGGCCCCAAGCTTAGTACACACTCAGGAACAAACACCCACGATGCGCTGCTCTCCCTGTCTTACTaGTGCCCCTCATCCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: VPGPKLSTHSGTNTHDALLSLSY*CPSSCS Trigger: ACTGCAGGATGAGGGGCAGCAGTAAGACAGGGAGAG...CAGCGCATCGTGGGTGTTTGTTCCTGAGTGTGTACTAAGCTTGGGGCCTGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCACATATGGAAGGTGGCACTGTACAGAGCCTCTGGAAAGGCAAGCCTGGGGGGCTCTGGAGTTCTaGGCCAGCAGTGTAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: FPTYGRWHCTEPLERQAWGALEF*ASSVVS Trigger: AGAGACTACACTGCTGGCCCAGAACTCCAGAGCCCC...CCAGGCTTGCCTTTCCAGAGGCTCTGTACAGTGCCACCTTCCATATGTGGGAAA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CAA 90 bp | TGCAGGGTGTCAGATTTGACGGCTATGGAAAAACAACGCAAGAGGTaGGAGGGAAGATGCATGAGGAGACGAGGGCAAGAGAAGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: CRVSDLTAMEKQRKR*EGRCMRRRGQEKLP Trigger: TGGCAGCTTCTCTTGCCCTCGTCTCCTCATGCATCTTCCCTCCAACCTCTTGCGTTGTTTTTCCATAGCCGTCAAATCTGACACCCTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CAA 90 bp | CCAAGAACACACTGGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTaGACGGCTATGGAAAAACAACGCAAGAGGTTGGAGGGAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: PRTHWEPDVSCRVSD*TAMEKQRKRLEGRC Trigger: GCATCTTCCCTCCAACCTCTTGCGTTGTTTTTCCATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR GCA 90 bp | AGACGTTTCCTGCAGGGTGTCAGATTTGACGGCTATGGAAAAACAACGCAAGAGTCTGTACGGGCTGAGTaGACCAGGCACTCCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: RRFLQGVRFDGYGKTTQESVRAE*TRHSCL Trigger: CAGACAGGAGTGCCTGGTGCACTCAGCCCGTACAGA...CTCTTGCGTTGTTTTTCCATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR GCA 90 bp | TGGACAGGTCTGAATTCAAGAGTGAGGACTGGACCCTCGTTCTCCAAGTCGTCTATGCTCATCTGCATGTaGACAGCTCTGGAAAGATCC | + |
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Preference number: 2 (lower is better) Translates to: WTGLNSRVRTGPSFSKSSMLICM*TALERS Trigger: GGATCTTTCCAGAGCTGTGCACATGCAGATGAGCAT...AGACGACTTGGAGAACGAGGGTCCAGTCCTCACTCTTGAATTCAGACCTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGAACGACTTTCCAAAACCACCAAGAAGGCCGCTGTGAGACAGAAAAGGCTGCAGGGTGTCAGATTTaGCGGCTATGGAAAAACAAC | + |
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Preference number: 2 (lower is better) Translates to: HRTTFQNHQEGRCETEKAAGCQI*RLWKNN Trigger: GTTGTTTTTCCATAGCCGTCAAATCTGACACCCTGC...AGCCTTTTCTGTCTCACAGCGGCCTTCTTGGTGGTTTTGGAAAGTCGTTCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR TCA 90 bp | AAGAACACACTGGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTTGACGGCTATTCTGTTTTCTTCTTCTaGTGTTGGCTTTTGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: KNTLGARRFLQGVRFDGYSVFFF*CWLLDG Trigger: CCCATCCAAAAGCCAACATCAGAAGAAGAAAACAGA...ATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR GCA 90 bp | ACGACTTTCCAAAACCACCAAGAAGGCCGCTGTGAGACAGAAAAGGCTGAGCTGGTTTTGCTTTACATTTaGTTCAGACTTCCTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: TTFQNHQEGRCETEKAELVLLYI*FRLPGG Trigger: GCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAAC...CAGCTCAGCCTTTTCTGTCTCACAGCGGCCTTCTTGGTGGTTTTGGAAAGTCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGACCAAGAAAACAATGCTTTCCCACATATGGAAGGTGGCACTGTACAGACTGGAAAGGCAAGCCTaGAGTGAAGAAACAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: QRTKKTMLSHIWKVALYRLERQA*SEETML Trigger: CAGCATTGTTTCTTCACTCCAGGCTTGCCTTTCCAG...TCTGTACAGTGCCACCTTCCATATGTGGGAAAGCATTGTTTTCTTGGTCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACATGACAGTTCCTTTTACCACTTCCCAATCATaGATTCATTCCTTTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PRTLRSHFHFPSHMTVPFTTSQS*IHSFQE Trigger: TTCCTGAAAGGAATGAATCCATGATTGGGAAGTGGT...AAAAGGAACTGTCATGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATCACTGCAGGCTTGAATCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTGCATGTGCACAGCTCTaGAAAGATCCTCTTGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: PITAGLNPVLLYICFRLPACAQL*KDPLVS Trigger: TGAGACAAGAGGATCTTTCCAGAGCTGTGCACATGC...AGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAACACACTGGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTTGACGGCTATATGTTGGCTTTTGGATaGGGGTTAAGATTTATAAAC | + |
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Preference number: 2 (lower is better) Translates to: KNTLGARRFLQGVRFDGYMLAFG*GLRFIN Trigger: GTTTATAAATCTTAACCCCCATCCAAAAGCCAACAT...ATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 72 bp | AAGCTGTCCGGCGGCTCGGCCCATCACTGTACTGCATaGTCTGGGCCTGCTTGCCAAGCCCCTCTGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: KLSGGSAHHCTA*SGPACQAPLAQ Trigger: CTGTGCCAGAGGGGCTTGGCAAGCAGGCCCAGACCATGCAGTACAGTGATGGGCCGAGCCGCCGGACAGCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 72 bp | CCCACGATGCGCTGCGGTTCAGGGGCTCTGGAGTTCTaGGCCAGCAGTGTAGTCTCTGTACGGGCTGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: PTMRCGSGALEF*ASSVVSVRAEC Trigger: GCACTCAGCCCGTACAGAGACTACACTGCTGGCCCAGAACTCCAGAGCCCCTGAACCGCAGCGCATCGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR TCA 72 bp | TCTGTACGGGCTGAGTGCACCAGGCACTCCTGTCTGTaGGCTGTTTCCTCTCCCTGTCTTACTGCTGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: SVRAECTRHSCL*AVSSPCLTAAP Trigger: AGGGGCAGCAGTAAGACAGGGAGAGGAAACAGCTCACAGACAGGAGTGCCTGGTGCACTCAGCCCGTACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR TCA 72 bp | GGAGTTCTGGGCCAGCAGTGTAGTCTCTGTACGGGCTaGGTGCACCAGGCACTCCTGTCTGTGAGCTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: GVLGQQCSLCTG*VHQALLSVSCF Trigger: GAAACAGCTCACAGACAGGAGTGCCTGGTGCACTCAGCCCGTACAGAGACTACACTGCTGGCCCAGAACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 72 bp | GTACTGCATGGTCTGGGCCTGCTTGCCAAGCCCCTCTaGCACAGGCTAAGATCGTACCAAGAACACACTGGG | + |
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Preference number: 3 (lower is better) Translates to: VLHGLGLLAKPL*HRLRSYQEHTG Trigger: CCCAGTGTGTTCTTGGTACGATCTTAGCCTGTGCCAGAGGGGCTTGGCAAGCAGGCCCAGACCATGCAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR GCA 72 bp | TTAGTACACACTCAGGAACAAACACCCACGATGCGCTaGGGTTCAGGGGCTCTGGAGTTCTGGGCCAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LVHTQEQTPTMR*GSGALEFWASS Trigger: ACTGCTGGCCCAGAACTCCAGAGCCCCTGAACCGCAGCGCATCGTGGGTGTTTGTTCCTGAGTGTGTACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR GCA 72 bp | CGCCCTGCCCTGCCACGGACCTCCGACTCCTATCACTaGAGGCTTGAATCCTGTTTTGCTTTACATTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: RPALPRTSDSYH*RLESCFALHLL Trigger: AAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGGAGTCGGAGGTCCGTGGCAGGGCAGGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 72 bp | CCTCTGGCACAGGCTAAGATCGTACCAAGAACACACTaGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTTG | + |
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Preference number: 3 (lower is better) Translates to: PLAQAKIVPRTH*EPDVSCRVSDL Trigger: CAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTTGGTACGATCTTAGCCTGTGCCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR TCA 72 bp | ACTGGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTTaGCGGCTATGGAAAAACAACGCAAGAGGTTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: TGSQTFPAGCQI*RLWKNNARGWR Trigger: CCTCCAACCTCTTGCGTTGTTTTTCCATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR TCA 72 bp | CTCTGGAAAGGCAAGCCTGGAGTGAAGAAACAATGCTaGAGAACTGTGACAGAGCTCCAGCCGGGACTAGCA | + |
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Preference number: 3 (lower is better) Translates to: LWKGKPGVKKQC*RTVTELQPGLA Trigger: TGCTAGTCCCGGCTGGAGCTCTGTCACAGTTCTTCAGCATTGTTTCTTCACTCCAGGCTTGCCTTTCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR TCA 72 bp | GACTCAGAGCCAAGGCCAGGGTCATCGAGGGATATTTaGAGAGCCCCATTCTACCACGTTCTAGACAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: DSEPRPGSSRDI*RAPFYHVLDKA Trigger: AGCTTTGTCTAGAACGTGGTAGAATGGGGCTCTTCAAATATCCCTCGATGACCCTGGCCTTGGCTCTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR TCA 72 bp | CCTGCCACGGACCTCCGACTCCTATCACTGCAGGCTTaGATCCTGTTTTGCTTTACATTTGCTTCAGACTTC | + |
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Preference number: 3 (lower is better) Translates to: PATDLRLLSLQA*ILFCFTFASDF Trigger: GAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGGAGTCGGAGGTCCGTGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| 3UTR CCA 72 bp | AGGTGGCACTGTACAGAGCCTCTGGAAAGGCAAGCCTaGAGTGAAGAAACAATGCTGAAGAACTGTGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: RWHCTEPLERQA*SEETMLKNCDR Trigger: TCTGTCACAGTTCTTCAGCATTGTTTCTTCACTCCAGGCTTGCCTTTCCAGAGGCTCTGTACAGTGCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| 3UTR TCA 72 bp | GCTCAAACAGAGCAGAGCGAGCAGAGTGAACACAGCTaGAGACTTGAGCAGAAACAGAGGACCAAGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: AQTEQSEQSEHS*RLEQKQRTKKT Trigger: TGTTTTCTTGGTCCTCTGTTTCTGCTCAAGTCTTCAGCTGTGTTCACTCTGCTCGCTCTGCTCTGTTTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| 3UTR GCA 72 bp | ATCGTACCAAGAACACACTGGGAGCCAGACGTTTCCTaGAGGGTGTCAGATTTGACGGCTATGGAAAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: IVPRTHWEPDVS*RVSDLTAMEKQ Trigger: TTGTTTTTCCATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTTGGTACGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| 3UTR CCA 72 bp | GAATCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTaGAGGCCTGACCCACATGAAGATGACCTGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ESCFALHLLQTS*RPDPHEDDLLH Trigger: GTGGAGCAGGTCATCTTCATGTGGGTCAGGCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| 3UTR TCA 72 bp | GGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACATaGCAGTTCCTTTTAACGTCTCTGTCACAGTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: GRLEATSIFLPT*QFLLTSLSQWT Trigger: TGTCCACTGTGACAGAGACGTTAAAAGGAACTGTCATGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| 3UTR CCA 72 bp | AAACAGAGGACCAAGAAAACAATGCTTTCCCACATATaGAAGGTGGCACTGTACAGAGCCTCTGGAAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KQRTKKTMLSHI*KVALYRASGKA Trigger: TGCCTTTCCAGAGGCTCTGTACAGTGCCACCTTCCATATGTGGGAAAGCATTGTTTTCTTGGTCCTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGACCAAGAAAACAATGCTTTCCCACATATGGAAGGTGGCACTGTACAGATTTCTTCTTCTGATGTaGGCTTTTGGATGGGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QRTKKTMLSHIWKVALYRFLLLM*AFGWGL Trigger: TAACCCCCATCCAAAAGCCAACATCAGAAGAAGAAA...TCTGTACAGTGCCACCTTCCATATGTGGGAAAGCATTGTTTTCTTGGTCCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCTGATGTTGGCTTTTGGATGGGGGTTAAGATTTATAAACACCATAATGCCTATCACTGCAGGCTaGAATCCTGTTTTGCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LLLMLAFGWGLRFINTIMPITAG*NPVLLY Trigger: GTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGG...CATTATGGTGTTTATAAATCTTAACCCCCATCCAAAAGCCAACATCAGAAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | TGGTCTGGGCCTGCTTGCCAAGCCCCTCTGGCACAGGCTAAGATCGTACCAAGACTTCCTGCAGTTTCCTaGGCTCTGCTTCCCGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSGPACQAPLAQAKIVPRLPAVS*ALLPVQ Trigger: CTGAACGGGAAGCAGAGCTCAGGAAACTGCAGGAAG...TCTTGGTACGATCTTAGCCTGTGCCAGAGGGGCTTGGCAAGCAGGCCCAGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGGGGCAGGTCAGGACTCAGAGCCAAGGCCAGGGTCATCGAGGGATATTTGTCGGGAGCTCTGTGTTaGTGTTCTTGGGATGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRGRSGLRAKARVIEGYLSGALC*CSWDEA Trigger: AGCCTCATCCCAAGAACATCAACACAGAGCTCCCGA...CAAATATCCCTCGATGACCCTGGCCTTGGCTCTGAGTCCTGACCTGCCCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | GTACCAGGCCCCAAGCTTAGTACACACTCAGGAACAAACACCCACGATGCGCTGACTTCTGAGGAAGACTaGGATGGAGACACCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGPKLSTHSGTNTHDALTSEED*DGDTRQ Trigger: CTGGCGGGTGTCTCCATCTCAGTCTTCCTCAGAAGT...CAGCGCATCGTGGGTGTTTGTTCCTGAGTGTGTACTAAGCTTGGGGCCTGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | GATGACCTGCTCCACCCAGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACAAAGGCAGGAGGCCCATaGCCTTCCTCCTGGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: DDLLHPGRLEATSIFLPTKAGGP*PSSWSL Trigger: AAGTGACCAGGAGGAAGGCCATGGGCCTCCTGCCTT...TGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCTGGGTGGAGCAGGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | CTAGCAAGAGGGGCAGGTCAGGACTCAGAGCCAAGGCCAGGGTCATCGAGGGATGGGATGAGGCTTCTGTaGATTCTTCAGCTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LARGAGQDSEPRPGSSRDGMRLL*ILQLLS Trigger: AGAAAGGAGCTGAAGAATCCACAGAAGCCTCATCCC...ATCCCTCGATGACCCTGGCCTTGGCTCTGAGTCCTGACCTGCCCCTCTTGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | AACACCCACGATGCGCTGCGGTTCAGGGGCTCTGGAGTTCTGGGCCAGCAGTGTAGAGGAAGCACCATCTaGCACACTTTCTATCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NTHDALRFRGSGVLGQQCRGSTI*HTFYQL Trigger: AAGTTGATAGAAAGTGTGTCAGATGGTGCTTCCTCT...ACACTGCTGGCCCAGAACTCCAGAGCCCCTGAACCGCAGCGCATCGTGGGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | GATGACCTGCTCCACCCAGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACACCCAGGACTGTGCTTTaGCATCCCATCTGGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DDLLHPGRLEATSIFLPTPRTVL*HPIWCF Trigger: GAAACACCAGATGGGATGTCAAAGCACAGTCCTGGG...TGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCTGGGTGGAGCAGGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR GCA 90 bp | GTCTGTGAGCTGTTTCCTCTCCCTGTCTTACTGCTGCCCCTCATCCTGCAGTTCGGACTCGGGTTTACTTaGAGAGATCTTCTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCELFPLPVLLLPLILQFGLGFT*RDLLGK Trigger: CTTCCCCAGAAGATCTCTGCAAGTAAACCCGAGTCC...GAACTGCAGGATGAGGGGCAGCAGTAAGACAGGGAGAGGAAACAGCTCACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR GCA 90 bp | CTGTCTGTGAGCTGTTTCCTCTCCCTGTCTTACTGCTGCCCCTCATCCTGCAGTATGTCCCCAGGACTGTaGTTTGACATCCCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSVSCFLSLSYCCPSSCSMSPGL*FDIPSG Trigger: ACCAGATGGGATGTCAAAGCACAGTCCTGGGGACAT...ACTGCAGGATGAGGGGCAGCAGTAAGACAGGGAGAGGAAACAGCTCACAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | GTACCAGGCCCCAAGCTTAGTACACACTCAGGAACAAACACCCACGATGCGCTGCTGTCATCTCCTCAGTaGTATCCAGATCACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPGPKLSTHSGTNTHDALLSSPQ*YPDHCP Trigger: TGGGCAGTGATCTGGATACCACTGAGGAGATGACAG...CAGCGCATCGTGGGTGTTTGTTCCTGAGTGTGTACTAAGCTTGGGGCCTGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGTGAGCTGTTTCCTCTCCCTGTCTTACTGCTGCCCCTCATCCTGCAGTAGGTCGTTCCTTTGCTaGCTGGAGAAACTCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSVSCFLSLSYCCPSSCSRSFLC*LEKLST Trigger: TGTGCTGAGTTTCTCCAGCCAGCAAAGGAACGACCT...ACTGCAGGATGAGGGGCAGCAGTAAGACAGGGAGAGGAAACAGCTCACAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| 3UTR CAA 72 bp | CACTGGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTaGACGGCTATGGAAAAACAACGCAAGAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HWEPDVSCRVSD*TAMEKQRKRLE Trigger: CTCCAACCTCTTGCGTTGTTTTTCCATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| 3UTR CAA 72 bp | GGACTCAGAGCCAAGGCCAGGGTCATCGAGGGATATTaGAAGAGCCCCATTCTACCACGTTCTAGACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLRAKARVIEGY*KSPILPRSRQS Trigger: GCTTTGTCTAGAACGTGGTAGAATGGGGCTCTTCAAATATCCCTCGATGACCCTGGCCTTGGCTCTGAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | ACGACTTTCCAAAACCACCAAGAAGGCCGCTGTGAGACAGAAAAGGCTGAGCTGGAACCTGAGCAGCACTaGCTTCTGAGGAAGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTFQNHQEGRCETEKAELEPEQH*LLRKTE Trigger: CTCAGTCTTCCTCAGAAGTCAGTGCTGCTCAGGTTC...CAGCTCAGCCTTTTCTGTCTCACAGCGGCCTTCTTGGTGGTTTTGGAAAGTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | AAGAACACACTGGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTTGACGGCTATCCATGGCCTTCCTCCTaGTCACTTGACTTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNTLGARRFLQGVRFDGYPWPSS*SLDLRR Trigger: TCTCCTCAAGTCAAGTGACCAGGAGGAAGGCCATGG...ATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | GTACCAGGCCCCAAGCTTAGTACACACTCAGGAACAAACACCCACGATGCGCTGCAGAGTTCCACATTCTaGAATGGTCTGCTTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: VPGPKLSTHSGTNTHDALQSSTF*NGLLGT Trigger: GGTTCCAAGCAGACCATTCCAGAATGTGGAACTCTG...CAGCGCATCGTGGGTGTTTGTTCCTGAGTGTGTACTAAGCTTGGGGCCTGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | GTACCAGGCCCCAAGCTTAGTACACACTCAGGAACAAACACCCACGATGCGCTGCTAGCTCTGGAACTTTaGCCTCAGTTACAATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPGPKLSTHSGTNTHDALLALEL*PQLQCC Trigger: GCAGCATTGTAACTGAGGCCAAAGTTCCAGAGCTAG...CAGCGCATCGTGGGTGTTTGTTCCTGAGTGTGTACTAAGCTTGGGGCCTGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | AAGAGGGGCAGGTCAGGACTCAGAGCCAAGGCCAGGGTCATCGAGGGATATTTGCTGGTGTTTCCAGACTaGATGGTGCAGTTTCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KRGRSGLRAKARVIEGYLLVFPD*MVQFQN Trigger: ATTCTGAAACTGCACCATCCAGTCTGGAAACACCAG...CAAATATCCCTCGATGACCCTGGCCTTGGCTCTGAGTCCTGACCTGCCCCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | CACAGAACGACTTTCCAAAACCACCAAGAAGGCCGCTGTGAGACAGAAAAGGCTTTCCTCCTGGTCACTTaGCTTGAGGAGAGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRTTFQNHQEGRCETEKAFLLVT*LEESCS Trigger: GGAACAGCTCTCCTCAAGTCAAGTGACCAGGAGGAA...AGCCTTTTCTGTCTCACAGCGGCCTTCTTGGTGGTTTTGGAAAGTCGTTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGGGGCAGGTCAGGACTCAGAGCCAAGGCCAGGGTCATCGAGGGATATTTGCAAAAGTTTCCCCACTaGAATCACAGAGTTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KRGRSGLRAKARVIEGYLQKFPH*NHRVPH Trigger: ATGTGGAACTCTGTGATTTCAGTGGGGAAACTTTTG...CAAATATCCCTCGATGACCCTGGCCTTGGCTCTGAGTCCTGACCTGCCCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR GCA 90 bp | GATGACCTGCTCCACCCAGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACACTTCCCGTTCAGTTTTaGTCTGTTTGCTTCGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: DDLLHPGRLEATSIFLPTLPVQF*SVCFEP Trigger: GGGTTCGAAGCAAACAGAGCAAAACTGAACGGGAAG...TGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCTGGGTGGAGCAGGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CCA 90 bp | GCACAGGCTAAGATCGTACCAAGAACACACTGGGAGCCAGACGTTTCCTGCAGGCATAGCCATACCATCTaGTTTCAGCAGAGTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: AQAKIVPRTHWEPDVSCRHSHTI*FQQSGN Trigger: GTTACCACTCTGCTGAAACCAGATGGTATGGCTATG...CCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTTGGTACGATCTTAGCCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | GGCCCATCACTGTACTGCATGGTCTGGGCCTGCTTGCCAAGCCCCTCTGGCACAAATTTCAATGACATGTaGGAATTCACATTCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPSLYCMVWACLPSPSGTNFNDM*EFTFTE Trigger: CTCAGTGAATGTGAATTCCCACATGTCATTGAAATT...TGTGCCAGAGGGGCTTGGCAAGCAGGCCCAGACCATGCAGTACAGTGATGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | GCATGTGCACAGCTCTGGAAAGATCCTCTTGTCTCAAGAATATCAACCACTTCCCTTCCTGCAGTTTCCTaGGCTCTGCTTCCCGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACAQLWKDPLVSRISTTSLPAVS*ALLPVQ Trigger: CTGAACGGGAAGCAGAGCTCAGGAAACTGCAGGAAG...GGAAGTGGTTGATATTCTTGAGACAAGAGGATCTTTCCAGAGCTGTGCACATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR GCA 90 bp | GCATGTGCACAGCTCTGGAAAGATCCTCTTGTCTCAAGAATATCAACCACTTCCCCACAGACTGGTCTCTaGCTTCCCAGATGTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ACAQLWKDPLVSRISTTSPQTGL*LPRCLP Trigger: GGGAAGACATCTGGGAAGGCAGAGACCAGTCTGTGG...GGAAGTGGTTGATATTCTTGAGACAAGAGGATCTTTCCAGAGCTGTGCACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| 3UTR CAA 72 bp | CCTCCGACTCCTATCACTGCAGGCTTGAATCCTGTTTaGCTTTACATTTGCTTCAGACTTCCTGGAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPTPITAGLNPV*LYICFRLPGGL Trigger: CAGGCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGGAGTCGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| 3UTR CAA 72 bp | CCCTGCCACGGACCTCCGACTCCTATCACTGCAGGCTaGAATCCTGTTTTGCTTTACATTTGCTTCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PCHGPPTPITAG*NPVLLYICFRL Trigger: AAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGGAGTCGGAGGTCCGTGGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| 3UTR CAA 72 bp | TCAGATTTGACGGCTATGGAAAAACAACGCAAGAGGTaGGAGGGAAGATGCATGAGGAGACGAGGGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDLTAMEKQRKR*EGRCMRRRGQE Trigger: CTCTTGCCCTCGTCTCCTCATGCATCTTCCCTCCAACCTCTTGCGTTGTTTTTCCATAGCCGTCAAATCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | AAGAACACACTGGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTTGACGGCTATAGAGTGGTAACAACTTaGGGAAATTGGGAGACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNTLGARRFLQGVRFDGYRVVTT*GNWETS Trigger: GCTAGTCTCCCAATTTCCTCAAGTTGTTACCACTCT...ATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR GCA 90 bp | AAGAGGGGCAGGTCAGGACTCAGAGCCAAGGCCAGGGTCATCGAGGGATATTTGAATCAGAAAATGATATaGCACACACTACACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRGRSGLRAKARVIEGYLNQKMI*HTLHSL Trigger: CAGAGAGTGTAGTGTGTGGCATATCATTTTCTGATT...CAAATATCCCTCGATGACCCTGGCCTTGGCTCTGAGTCCTGACCTGCCCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR GCA 90 bp | AGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACATGACAGTTCCTTTTAACCCACAGACTGGTCTCTaGCTTCCCAGATGTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTLRSHFHFPSHMTVPFNPQTGL*LPRCLP Trigger: GGGAAGACATCTGGGAAGGCAGAGACCAGTCTGTGG...GTTAAAAGGAACTGTCATGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CCA 90 bp | GCACAGGCTAAGATCGTACCAAGAACACACTGGGAGCCAGACGTTTCCTGCAGGTTCTCTAGTCACTGCTaGATCAATAGTGCCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQAKIVPRTHWEPDVSCRFSSHC*INSAIC Trigger: ACAAATGGCACTATTGATCCAGCAGTGACTAGAGAA...CCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTTGGTACGATCTTAGCCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGGACCAAGAAAACAATGCTTTCCCACATATGGAAGGTGGCACTGTACAGACGTTCCTTTGCTGGCTaGAGAAACTCAGCACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRTKKTMLSHIWKVALYRRSFAG*RNSAHA Trigger: AGCGTGTGCTGAGTTTCTCCAGCCAGCAAAGGAACG...TCTGTACAGTGCCACCTTCCATATGTGGGAAAGCATTGTTTTCTTGGTCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | CACAGAACGACTTTCCAAAACCACCAAGAAGGCCGCTGTGAGACAGAAAAGGCTTGTCTTCCCGTTGCTTaGCTTCCAACCGTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRTTFQNHQEGRCETEKACLPVA*LPTVFS Trigger: AGAGAAAACGGTTGGAAGCCAAGCAACGGGAAGACA...AGCCTTTTCTGTCTCACAGCGGCCTTCTTGGTGGTTTTGGAAAGTCGTTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCCACATATGGAAGGTGGCACTGTACAGAGCCTCTGGAAAGGCAAGCCTGGTATCAACTTTCCTGTTaGCTCTGTAAAACCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FPTYGRWHCTEPLERQAWYQLSC*LCKTRC Trigger: GCATCTGGTTTTACAGAGTCAACAGGAAAGTTGATA...CCAGGCTTGCCTTTCCAGAGGCTCTGTACAGTGCCACCTTCCATATGTGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | GTCTGTGAGCTGTTTCCTCTCCCTGTCTTACTGCTGCCCCTCATCCTGCAGTTCCTACTTCCTTGTATGTaGGAAGTGTCTGTTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCELFPLPVLLLPLILQFLLPCM*EVSVVF Trigger: AAAAACAACAGACACTTCTCACATACAAGGAAGTAG...GAACTGCAGGATGAGGGGCAGCAGTAAGACAGGGAGAGGAAACAGCTCACAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR GCA 90 bp | CAAGAAAACAATGCTTTCCCACATATGGAAGGTGGCACTGTACAGAGCCTCTGGTGGTATCCAGATCACTaGCCAAGGCACTCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QENNAFPHMEGGTVQSLWWYPDH*PRHSPK Trigger: TTTTGGAGAGTGCCTTGGGCAGTGATCTGGATACCA...CCAGAGGCTCTGTACAGTGCCACCTTCCATATGTGGGAAAGCATTGTTTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR GCA 90 bp | GCATGTGCACAGCTCTGGAAAGATCCTCTTGTCTCAAGAATATCAACCACTTCCCAGTTTTGCTCTGTTTaGTTCGAACCCCAAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ACAQLWKDPLVSRISTTSQFCSV*FEPQGH Trigger: GTGCCCTTGGGGTTCGAAGCAAACAGAGCAAAACTG...GGAAGTGGTTGATATTCTTGAGACAAGAGGATCTTTCCAGAGCTGTGCACATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACATGACAGTTCCTTTTTTCCACATTCTGGAATaGTCTGCTTGGAACCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRTLRSHFHFPSHMTVPFFHILE*SAWNLS Trigger: GCTCAGGTTCCAAGCAGACCATTCCAGAATGTGGAA...AAAAGGAACTGTCATGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCTGGG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | CAAGAAAACAATGCTTTCCCACATATGGAAGGTGGCACTGTACAGAGCCTCTGGTTGATGTTCTTGGGATaGGGCTTCTGTGGATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QENNAFPHMEGGTVQSLWLMFLG*GFCGFF Trigger: GAAGAATCCACAGAAGCCTCATCCCAAGAACATCAA...CCAGAGGCTCTGTACAGTGCCACCTTCCATATGTGGGAAAGCATTGTTTTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR GCA 90 bp | AGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACATGACAGTTCCTTTTAACCAGTTTTGCTCTGTTTaGTTCGAACCCCAAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTLRSHFHFPSHMTVPFNQFCSV*FEPQGH Trigger: GTGCCCTTGGGGTTCGAAGCAAACAGAGCAAAACTG...GTTAAAAGGAACTGTCATGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| CDS-3UTR CCA 90 bp | ACGACTTTCCAAAACCACCAAGAAGGCCGCTGTGAGACAGAAAAGGCTGAGCTGCCACAGTCTCAAGAATaGAATCTACACCTTTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TTFQNHQEGRCETEKAELPQSQE*NLHLFD Trigger: GTCAAAAAGGTGTAGATTCCATTCTTGAGACTGTGG...CAGCTCAGCCTTTTCTGTCTCACAGCGGCCTTCTTGGTGGTTTTGGAAAGTCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | CCTATCACTGCAGGCTTGAATCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTCGTTCCTTTGCTGGCTaGAGAAACTCAGCACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: PITAGLNPVLLYICFRLPRSFAG*RNSAHA Trigger: AGCGTGTGCTGAGTTTCTCCAGCCAGCAAAGGAACG...AGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTGGAGGCCTGACCCACATGAATGTCTTCCCGTTGCTTaGCTTCCAACCGTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCFALHLLQTSWRPDPHECLPVA*LPTVFS Trigger: AGAGAAAACGGTTGGAAGCCAAGCAACGGGAAGACA...TTCATGTGGGTCAGGCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CCA 90 bp | GCATGTGCACAGCTCTGGAAAGATCCTCTTGTCTCAAGAATATCAACCACTTCCCCATGTCAGGCCTTTTaGTTCGAACTCTACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ACAQLWKDPLVSRISTTSPCQAF*FELYIS Trigger: AGAGATGTAGAGTTCGAACCAAAAGGCCTGACATGG...GGAAGTGGTTGATATTCTTGAGACAAGAGGATCTTTCCAGAGCTGTGCACATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | GCATGTGCACAGCTCTGGAAAGATCCTCTTGTCTCAAGAATATCAACCACTTCCTTCTTTTTGATCTTTTaGCACAAAGGCAGGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ACAQLWKDPLVSRISTTSFFLIF*HKGRRP Trigger: GGGCCTCCTGCCTTTGTGCCAAAAGATCAAAAAGAA...GGAAGTGGTTGATATTCTTGAGACAAGAGGATCTTTCCAGAGCTGTGCACATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | GATGACCTGCTCCACCCAGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACAAATTTCAATGACATGTaGGAATTCACATTCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DDLLHPGRLEATSIFLPTNFNDM*EFTFTE Trigger: CTCAGTGAATGTGAATTCCCACATGTCATTGAAATT...TGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCTGGGTGGAGCAGGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CCA 90 bp | CCTATCACTGCAGGCTTGAATCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTAGGTCGTTCCTTTGCTaGCTGGAGAAACTCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PITAGLNPVLLYICFRLPRSFLC*LEKLST Trigger: TGTGCTGAGTTTCTCCAGCCAGCAAAGGAACGACCT...AGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CCA 90 bp | AGATCCTCTTGTCTCAAGAATATCAACCACTTCCCAATCATGGATTCATTCCTTCTGGAATGGTCTGCTTaGAACCTGAGCAGCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSSCLKNINHFPIMDSFLLEWSA*NLSSTD Trigger: GTCAGTGCTGCTCAGGTTCCAAGCAGACCATTCCAG...AAGGAATGAATCCATGATTGGGAAGTGGTTGATATTCTTGAGACAAGAGGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | GCATGTGCACAGCTCTGGAAAGATCCTCTTGTCTCAAGAATATCAACCACTTCCATCAACATCTTCATCTaGACCTCCAGGAACAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ACAQLWKDPLVSRISTTSINIFI*TSRNRN Trigger: GTTTCTGTTCCTGGAGGTCCAGATGAAGATGTTGAT...GGAAGTGGTTGATATTCTTGAGACAAGAGGATCTTTCCAGAGCTGTGCACATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTGGAGGCCTGACCCACATGAACTTAGCTCTATCAAGTaGAGCTACATCTGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCFALHLLQTSWRPDPHELSSIK*SYICTH Trigger: ATGAGTGCAGATGTAGCTCCACTTGATAGAGCTAAG...TTCATGTGGGTCAGGCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTGGAGGCCTGACCCACATGAACAGCAGTCTTCTTTATaGGTAAAGAGGAAGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCFALHLLQTSWRPDPHEQQSSL*VKRKHH Trigger: ATGGTGCTTCCTCTTTACCCATAAAGAAGACTGCTG...TTCATGTGGGTCAGGCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | TCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTGGAGGCCTGACCCACATGAAAGACAACCTTCTTTTTaGTCTTTTGGCACAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCFALHLLQTSWRPDPHERQPSF*SFGTKA Trigger: TGCCTTTGTGCCAAAAGATCAAAAAGAAGGTTGTCT...TTCATGTGGGTCAGGCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTGGAGGCCTGACCCACATGAATCAAATCTAGGCTCCTaGATGCTTTTTCTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCFALHLLQTSWRPDPHESNLGS*MLFLFF Trigger: GAAGAACAGAAAAAGCATCCAGGAGCCTAGATTTGA...TTCATGTGGGTCAGGCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| 3UTR CAA 72 bp | AAAAGGCAGTACTGGAGTCCTTGGTATTTTCTTTCATaGTATTCACTGCTCAAACAGAGCAGAGCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KRQYWSPWYFLS*YSLLKQSRASR Trigger: TCTGCTCGCTCTGCTCTGTTTGAGCAGTGAATACAATGAAAGAAAATACCAAGGACTCCAGTACTGCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | CCTATCACTGCAGGCTTGAATCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTGAATCTACACCTTTTTaGCCCAAGACAGACTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PITAGLNPVLLYICFRLPESTPF*PKTDSV Trigger: TACAGAGTCTGTCTTGGGTCAAAAAGGTGTAGATTC...AGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | TTTCTTCTTCTGATGTTGGCTTTTGGATGGGGGTTAAGATTTATAAACACCATAAGCAGCACTGACTTCTaGGGAAGACTGAGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLLLMLAFGWGLRFINTISSTDF*GRLRWR Trigger: TCTCCATCTCAGTCTTCCTCAGAAGTCAGTGCTGCT...TATGGTGTTTATAAATCTTAACCCCCATCCAAAAGCCAACATCAGAAGAAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR TCA 90 bp | CCTATCACTGCAGGCTTGAATCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTGGAATTCACATTCACTaGGGTCAATATCAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PITAGLNPVLLYICFRLPGIHIH*GQYQEV Trigger: AACTTCCTGATATTGACCTCAGTGAATGTGAATTCC...AGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGAATATCAACCACTTCCCAATCATGGATTCATTCCTTTCAGGAACTGATACTTCCCGTTCAGTTTTaGTCTGTTTGCTTCGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SRISTTSQSWIHSFQELILPVQF*SVCFEP Trigger: GGGTTCGAAGCAAACAGAGCAAAACTGAACGGGAAG...TATCAGTTCCTGAAAGGAATGAATCCATGATTGGGAAGTGGTTGATATTCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| CDS-3UTR TCA 90 bp | TCTTGTCTCAAGAATATCAACCACTTCCCAATCATGGATTCATTCCTTTCAGGAGGAATTCACATTCACTaGGGTCAATATCAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCLKNINHFPIMDSFLSGGIHIH*GQYQEV Trigger: AACTTCCTGATATTGACCTCAGTGAATGTGAATTCC...TCCTGAAAGGAATGAATCCATGATTGGGAAGTGGTTGATATTCTTGAGACAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| CDS-3UTR GCA 90 bp | CTTCTTCTGATGTTGGCTTTTGGATGGGGGTTAAGATTTATAAACACCATAATGTTTAGGTACATAGAGTaGCATGTCAGGCCTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLMLAFGWGLRFINTIMFRYIE*HVRPFG Trigger: ACCAAAAGGCCTGACATGGCACTCTATGTACCTAAA...CATTATGGTGTTTATAAATCTTAACCCCCATCCAAAAGCCAACATCAGAAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR GCA 90 bp | TCTTGTCTCAAGAATATCAACCACTTCCCAATCATGGATTCATTCCTTTCAGGATGGCCTCAGTTACAATaGTGCTTTCCAAATTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SCLKNINHFPIMDSFLSGWPQLQ*CFPNFY Trigger: ATAGAAATTTGGAAAGCAGCATTGTAACTGAGGCCA...TCCTGAAAGGAATGAATCCATGATTGGGAAGTGGTTGATATTCTTGAGACAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR GCA 90 bp | TCTTGTCTCAAGAATATCAACCACTTCCCAATCATGGATTCATTCCTTTCAGGACTCTGTAAAACCAGATaGAATACTCTCAGCATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SCLKNINHFPIMDSFLSGLCKTR*NTLSIN Trigger: ATTTATGCTGAGAGTATTGCATCTGGTTTTACAGAG...TCCTGAAAGGAATGAATCCATGATTGGGAAGTGGTTGATATTCTTGAGACAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR CCA 90 bp | TTTCTTCTTCTGATGTTGGCTTTTGGATGGGGGTTAAGATTTATAAACACCATATCAAATCTAGGCTCCTaGATGCTTTTTCTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLMLAFGWGLRFINTISNLGS*MLFLFF Trigger: GAAGAACAGAAAAAGCATCCAGGAGCCTAGATTTGA...TATGGTGTTTATAAATCTTAACCCCCATCCAAAAGCCAACATCAGAAGAAGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR CAA 90 bp | GTACCAGGCCCCAAGCTTAGTACACACTCAGGAACAAACACCCACGATGCGCTGTGGCCTTGGCTGCTCTaGTGGCCTGTGACAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPGPKLSTHSGTNTHDALWPWLL*WPVTRA Trigger: GGCCCTTGTCACAGGCCACAAGAGCAGCCAAGGCCA...CAGCGCATCGTGGGTGTTTGTTCCTGAGTGTGTACTAAGCTTGGGGCCTGGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS TCA 90 bp | CACATTCTGGAATGGTCTGCTTGGAACCTGAGCAGCACTGACTTCTaGGGAAGACTGAGATGGAGACACCCGCCAGTGTCCTGTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HILEWSAWNLSSTDF*GRLRWRHPPVSCRS Trigger: GGAGCGACAGGACACTGGCGGGTGTCTCCATCTCAGTCTTCCTCAGAAGTCAGTGCTGCTCAGGTTCCAAGCAGACCATTCCAGAATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR CAA 90 bp | CTGTCTGTGAGCTGTTTCCTCTCCCTGTCTTACTGCTGCCCCTCATCCTGCAGTTCCTGGTCACTTGACTaGAGGAGAGCTGTTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSVSCFLSLSYCCPSSCSSWSLD*RRAVPL Trigger: AAGGGGAACAGCTCTCCTCAAGTCAAGTGACCAGGA...ACTGCAGGATGAGGGGCAGCAGTAAGACAGGGAGAGGAAACAGCTCACAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS GCA 90 bp | TCTGGACCTCCAGGAACAGAAACCACAGAGATGTCCCCAGGACTGTaGTTTGACATCCCATCTGGTGTTTCCAGACTGGATGGTGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGPPGTETTEMSPGL*FDIPSGVSRLDGAV Trigger: AACTGCACCATCCAGTCTGGAAACACCAGATGGGATGTCAAAGCACAGTCCTGGGGACATCTCTGTGGTTTCTGTTCCTGGAGGTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS GCA 90 bp | GGTCGTGCAAGGCCTCTGTCATCTCCTCAGTGGTATCCAGATCACTaGCCAAGGCACTCTCCAAAAGTACGTCTGATGCATCTGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: GRARPLSSPQWYPDH*PRHSPKVRLMHLTY Trigger: GTATGTCAGATGCATCAGACGTACTTTTGGAGAGTGCCTTGGGCAGTGATCTGGATACCACTGAGGAGATGACAGAGGCCTTGCACGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CAA 90 bp | AAGAACACACTGGGAGCCAGACGTTTCCTGCAGGGTGTCAGATTTGACGGCTATCCCCAGGACTGTGCTTaGACATCCCATCTGGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KNTLGARRFLQGVRFDGYPQDCA*TSHLVF Trigger: AAACACCAGATGGGATGTCAAAGCACAGTCCTGGGG...ATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCTGGCTCCCAGTGTGTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CAA 90 bp | TGGACAGGTCTGAATTCAAGAGTGAGGACTGGACCCTCGTTCTCCAAGTCGTCTTCTCAGGTCGTTCCTTaGCTGGCTGGAGAAACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: WTGLNSRVRTGPSFSKSSSQVVP*LAGETQ Trigger: CTGAGTTTCTCCAGCCAGCAAAGGAACGACCTGAGA...AGACGACTTGGAGAACGAGGGTCCAGTCCTCACTCTTGAATTCAGACCTGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| CDS TCA 90 bp | ACCTCCAGGAACAGAAACCACAGAGATGTCCCCAGGACTGTGCTTTaGCATCCCATCTGGTGTTTCCAGACTGGATGGTGCAGTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TSRNRNHRDVPRTVL*HPIWCFQTGWCSFR Trigger: TCTGAAACTGCACCATCCAGTCTGGAAACACCAGATGGGATGTCAAAGCACAGTCCTGGGGACATCTCTGTGGTTTCTGTTCCTGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS GCA 90 bp | TGCCACTACTCTCACCAGATTCTCCAACTGCACCTGTACAAGAGCTaGCTTCAGTTACAGGGTCACAAGCTGTACCTGCAATGTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: CHYSHQILQLHLYKS*LQLQGHKLYLQCPP Trigger: TGGTGGACATTGCAGGTACAGCTTGTGACCCTGTAACTGAAGGCAGCTCTTGTACAGGTGCAGTTGGAGAATCTGGTGAGAGTAGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CAA 90 bp | TCAAGAGTGAGGACTGGACCCTCGTTCTCCAAGTCGTCTGTTTTGTTCATGTTTGCACACGCTCTAGCTTaGGCCTTGGCTGCTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRVRTGPSFSKSSVLFMFAHALA*ALAALV Trigger: CACAAGAGCAGCCAAGGCCAAAGCTAGAGCGTGTGC...AAACATGAACAAAACAGACGACTTGGAGAACGAGGGTCCAGTCCTCACTCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CAA 90 bp | TGGACAGGTCTGAATTCAAGAGTGAGGACTGGACCCTCGTTCTCCAAGTCGTCTATGTCTTCCCGTTGCTaGGCTTCCAACCGTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WTGLNSRVRTGPSFSKSSMSSRC*ASNRFL Trigger: GAGAAAACGGTTGGAAGCCAAGCAACGGGAAGACAT...AGACGACTTGGAGAACGAGGGTCCAGTCCTCACTCTTGAATTCAGACCTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CAA 90 bp | AGACGTTTCCTGCAGGGTGTCAGATTTGACGGCTATGGAAAAACAACGCAAGAGGCCATGTCAGGCCTTTaGGTTCGAACTCTACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRFLQGVRFDGYGKTTQEAMSGL*VRTLHL Trigger: GAGATGTAGAGTTCGAACCAAAAGGCCTGACATGGC...CTCTTGCGTTGTTTTTCCATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CAA 90 bp | TCTTGTCTCAAGAATATCAACCACTTCCCAATCATGGATTCATTCCTTTCAGGATGGCCTTGGCTGCTCTaGTGGCCTGTGACAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCLKNINHFPIMDSFLSGWPWLL*WPVTRA Trigger: GGCCCTTGTCACAGGCCACAAGAGCAGCCAAGGCCA...TCCTGAAAGGAATGAATCCATGATTGGGAAGTGGTTGATATTCTTGAGACAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS GCA 90 bp | ACCTGTACAAGAGCTGCCTTCAGTTACAGGGTCACAAGCTGTACCTaGAATGTCCACCATACAAGCCTTGCTGGTACTGTCACATACATT | + |
|
Preference number: 5 (lower is better) Translates to: TCTRAAFSYRVTSCT*NVHHTSLAGTVTYI Trigger: AATGTATGTGACAGTACCAGCAAGGCTTGTATGGTGGACATTGCAGGTACAGCTTGTGACCCTGTAACTGAAGGCAGCTCTTGTACAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CAA 90 bp | GATGACCTGCTCCACCCAGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACAAAGACAACCTTCTTTTaGATCTTTTGGCACAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DDLLHPGRLEATSIFLPTKTTFF*IFWHKG Trigger: GCCTTTGTGCCAAAAGATCAAAAAGAAGGTTGTCTT...TGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCTGGGTGGAGCAGGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGTGAGCTGTTTCCTCTCCCTGTCTTACTGCTGCCCCTCATCCTGCAGTTCATCAAATCCTTTCTTTaGGTAACTGCAGAAAATCCG | + |
|
Preference number: 5 (lower is better) Translates to: VCELFPLPVLLLPLILQFIKSFL*VTAENP Trigger: CGGATTTTCTGCAGTTACCAAAAGAAAGGATTTGAT...GAACTGCAGGATGAGGGGCAGCAGTAAGACAGGGAGAGGAAACAGCTCACAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
||
| CDS-3UTR CAA 90 bp | TCAAGAGTGAGGACTGGACCCTCGTTCTCCAAGTCGTCTGTTTTGTTCATGTTTTCAGTTTTGCTCTGTTaGCTTCGAACCCCAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRVRTGPSFSKSSVLFMFSVLLC*LRTPRA Trigger: TGCCCTTGGGGTTCGAAGCAAACAGAGCAAAACTGA...AAACATGAACAAAACAGACGACTTGGAGAACGAGGGTCCAGTCCTCACTCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CAA 90 bp | TTGAATCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTGGAGGCCTGACCCACTCAGTTTTGCTCTGTTaGCTTCGAACCCCAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LNPVLLYICFRLPGGLTHSVLLC*LRTPRA Trigger: TGCCCTTGGGGTTCGAAGCAAACAGAGCAAAACTGA...GTGGGTCAGGCCTCCAGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGAGTGAGGACTGGACCCTCGTTCTCCAAGTCGTCTGTTTTGTTCATGTTTATGTCTTCCCGTTGCTaGGCTTCCAACCGTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRVRTGPSFSKSSVLFMFMSSRC*ASNRFL Trigger: GAGAAAACGGTTGGAAGCCAAGCAACGGGAAGACAT...AAACATGAACAAAACAGACGACTTGGAGAACGAGGGTCCAGTCCTCACTCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
||
| CDS-3UTR CAA 90 bp | AGACGTTTCCTGCAGGGTGTCAGATTTGACGGCTATGGAAAAACAACGCAAGAGGGAATCTACACCTTTTaGACCCAAGACAGACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRFLQGVRFDGYGKTTQEGIYTF*TQDRLC Trigger: ACAGAGTCTGTCTTGGGTCAAAAAGGTGTAGATTCC...CTCTTGCGTTGTTTTTCCATAGCCGTCAAATCTGACACCCTGCAGGAAACGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR CAA 90 bp | GCATGTGCACAGCTCTGGAAAGATCCTCTTGTCTCAAGAATATCAACCACTTCCCTCTTTATTCTGTTTTaGTGGGCACCTGTCTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: ACAQLWKDPLVSRISTTSLFILF*WAPVFP Trigger: AGGAAAGACAGGTGCCCACAAAAACAGAATAAAGAG...GGAAGTGGTTGATATTCTTGAGACAAGAGGATCTTTCCAGAGCTGTGCACATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR CAA 90 bp | CCCAGGACGCTTAGAAGCCACTTCCATTTTCCTTCCCACATGACAGTTCCTTTTTTTGTGCTCTCTAATTaGCTGACTACCGCCATTTTA | + |
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Preference number: 5 (lower is better) Translates to: PRTLRSHFHFPSHMTVPFFVLSN*LTTAIL Trigger: TAAAATGGCGGTAGTCAGCAAATTAGAGAGCACAAA...AAAAGGAACTGTCATGTGGGAAGGAAAATGGAAGTGGCTTCTAAGCGTCCTGGG 44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR CAA 90 bp | TTTCTTCTTCTGATGTTGGCTTTTGGATGGGGGTTAAGATTTATAAACACCATAGCACACGCTCTAGCTTaGGCCTTGGCTGCTCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: FLLLMLAFGWGLRFINTIAHALA*ALAALV Trigger: CACAAGAGCAGCCAAGGCCAAAGCTAGAGCGTGTGC...TATGGTGTTTATAAATCTTAACCCCCATCCAAAAGCCAACATCAGAAGAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR CAA 90 bp | AGATCCTCTTGTCTCAAGAATATCAACCACTTCCCAATCATGGATTCATTCCTTTCTCAGGTCGTTCCTTaGCTGGCTGGAGAAACTCAG | + |
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Preference number: 5 (lower is better) Translates to: RSSCLKNINHFPIMDSFLSQVVP*LAGETQ Trigger: CTGAGTTTCTCCAGCCAGCAAAGGAACGACCTGAGA...AAGGAATGAATCCATGATTGGGAAGTGGTTGATATTCTTGAGACAAGAGGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| CDS TCA 90 bp | AGAGAAACGTTATCCACAGTCTCAAGAATGGAATCTACACCTTTTTaGCCCAAGACAGACTCTGTACTGTTGACTGTACCCTCACTCTCA | + |
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Preference number: 5 (lower is better) Translates to: RETLSTVSRMESTPF*PKTDSVLLTVPSLS Trigger: TGAGAGTGAGGGTACAGTCAACAGTACAGAGTCTGTCTTGGGTCAAAAAGGTGTAGATTCCATTCTTGAGACTGTGGATAACGTTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR CAA 90 bp | CCTATCACTGCAGGCTTGAATCCTGTTTTGCTTTACATTTGCTTCAGACTTCCTCACAGCACTACTTCCTaGTATGTGAGAAGTGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: PITAGLNPVLLYICFRLPHSTTS*YVRSVC Trigger: ACAGACACTTCTCACATACAAGGAAGTAGTGCTGTG...AGGAAGTCTGAAGCAAATGTAAAGCAAAACAGGATTCAAGCCTGCAGTGATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CCA 90 bp | GTACGTCTGATGCATCTGACATACTCAGTTCAGAGTCCAGACAAGTaGCAATATTACTATCAGCAGTCTTCTTTATGGGTAAAGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VRLMHLTYSVQSPDK*QYYYQQSSLWVKRK Trigger: CTTCCTCTTTACCCATAAAGAAGACTGCTGATAGTAATATTGCCACTTGTCTGGACTCTGAACTGAGTATGTCAGATGCATCAGACGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS-3UTR CAA 90 bp | TCAAGAGTGAGGACTGGACCCTCGTTCTCCAAGTCGTCTGTTTTGTTCATGTTTATCAAATCCTTTCTTTaGGTAACTGCAGAAAATCCG | + |
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Preference number: 5 (lower is better) Translates to: SRVRTGPSFSKSSVLFMFIKSFL*VTAENP Trigger: CGGATTTTCTGCAGTTACCAAAAGAAAGGATTTGAT...AAACATGAACAAAACAGACGACTTGGAGAACGAGGGTCCAGTCCTCACTCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| CDS GCA 90 bp | CTACATCTGCACTCATTTCTATATAATCTGAGAAATTTCTCATGTTaGCACTACTCTCACCAGATTCTCCAACTGCACCTGTACAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: LHLHSFLYNLRNFSC*HYSHQILQLHLYKS Trigger: GCTCTTGTACAGGTGCAGTTGGAGAATCTGGTGAGAGTAGTGGCAACATGAGAAATTTCTCAGATTATATAGAAATGAGTGCAGATGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CCA 90 bp | CAGAGTCCAGACAAGTGGCAATATTACTATCAGCAGTCTTCTTTATaGGTAAAGAGGAAGCACCATCTGACACACTTTCTATCAACTTTC | + |
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Preference number: 5 (lower is better) Translates to: QSPDKWQYYYQQSSL*VKRKHHLTHFLSTF Trigger: GAAAGTTGATAGAAAGTGTGTCAGATGGTGCTTCCTCTTTACCCATAAAGAAGACTGCTGATAGTAATATTGCCACTTGTCTGGACTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS TCA 90 bp | AACATAGATTCCCAGCTTTCCTCCACAGCACTACTTCCTTGTATGTaGGAAGTGTCTGTTGTTTTTAGATCTACAGATGTTTCCACAGAT | + |
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Preference number: 5 (lower is better) Translates to: NIDSQLSSTALLPCM*EVSVVFRSTDVSTD Trigger: ATCTGTGGAAACATCTGTAGATCTAAAAACAACAGACACTTCTCACATACAAGGAAGTAGTGCTGTGGAGGAAAGCTGGGAATCTATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS TCA 72 bp | AAAGGCAGGAGGCCCATGGCCTTCCTCCTGGTCACTTaGCTTGAGGAGAGCTGTTCCCCTTCGAGCTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: KGRRPMAFLLVT*LEESCSPSSFR Trigger: CCTAAAGCTCGAAGGGGAACAGCTCTCCTCAAGTCAAGTGACCAGGAGGAAGGCCATGGGCCTCCTGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160893.2 |
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| CDS CCA 72 bp | TTTGGCACAAAGGCAGGAGGCCCATGGCCTTCCTCCTaGTCACTTGACTTGAGGAGAGCTGTTCCCCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: FGTKAGGPWPSS*SLDLRRAVPLR Trigger: TCGAAGGGGAACAGCTCTCCTCAAGTCAAGTGACCAGGAGGAAGGCCATGGGCCTCCTGCCTTTGTGCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160893.2 |
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| CDS TCA 72 bp | CATTCTGGAATGGTCTGCTTGGAACCTGAGCAGCACTaGCTTCTGAGGAAGACTGAGATGGAGACACCCGCC | + |
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Preference number: 6 (lower is better) Translates to: HSGMVCLEPEQH*LLRKTEMETPA Trigger: GGCGGGTGTCTCCATCTCAGTCTTCCTCAGAAGTCAGTGCTGCTCAGGTTCCAAGCAGACCATTCCAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CCA 72 bp | AAGGCTGCTGAAGTCTCAGGTCGTTCCTTTGCTGGCTaGAGAAACTCAGCACACGCTCTAGCTTTGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: KAAEVSGRSFAG*RNSAHALALAL Trigger: CAAGGCCAAAGCTAGAGCGTGTGCTGAGTTTCTCCAGCCAGCAAAGGAACGACCTGAGACTTCAGCAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| CDS CAA 90 bp | TCTCGGGCTTCCTGCAGTTTCCTGAGCTCTGCTTCCCGTTCAGTTTaGCTCTGTTTGCTTCGAACCCCAAGGGCACTGATGACTAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: SRASCSFLSSASRSV*LCLLRTPRALMTSL Trigger: AAGGCTAGTCATCAGTGCCCTTGGGGTTCGAAGCAAACAGAGCAAAACTGAACGGGAAGCAGAGCTCAGGAAACTGCAGGAAGCCCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| CDS TCA 72 bp | CTGTTCTTCACATTCCCAGATAATTCTGAGGAAGACTaGGATGGAGACACCCGCCAGTGTCCTGTCGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LFFTFPDNSEED*DGDTRQCPVAP Trigger: GGGAGCGACAGGACACTGGCGGGTGTCTCCATCTCAGTCTTCCTCAGAATTATCTGGGAATGTGAAGAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160893.2 |
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| CDS CCA 72 bp | ACATCCTTCCTATCAGAATGGCCTGCACCTCGTCTCTaGGACTCGGGTTTACTTGCAGAGATCTTCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: TSFLSEWPAPRL*DSGLLAEIFWG Trigger: TCCCCAGAAGATCTCTGCAAGTAAACCCGAGTCCCAGAGACGAGGTGCAGGCCATTCTGATAGGAAGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160893.2 |
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| CDS CAA 72 bp | TCCTGCAGTTTCCTGAGCTCTGCTTCCCGTTCAGTTTaGCTCTGTTTGCTTCGAACCCCAAGGGCACTGATG | + |
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Preference number: 6 (lower is better) Translates to: SCSFLSSASRSV*LCLLRTPRALM Trigger: CATCAGTGCCCTTGGGGTTCGAAGCAAACAGAGCAAAACTGAACGGGAAGCAGAGCTCAGGAAACTGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| CDS CAA 90 bp | GACCTCCAGGAACAGAAACCACAGAGATGTCCCCAGGACTGTGCTTaGACATCCCATCTGGTGTTTCCAGACTGGATGGTGCAGTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: DLQEQKPQRCPQDCA*TSHLVFPDWMVQFQ Trigger: CTGAAACTGCACCATCCAGTCTGGAAACACCAGATGGGATGTCAAAGCACAGTCCTGGGGACATCTCTGTGGTTTCTGTTCCTGGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS TCA 72 bp | AACAGAAACCACAGAGATGTCCCCAGGACTGTGCTTTaGCATCCCATCTGGTGTTTCCAGACTGGATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: NRNHRDVPRTVL*HPIWCFQTGWC Trigger: GCACCATCCAGTCTGGAAACACCAGATGGGATGTCAAAGCACAGTCCTGGGGACATCTCTGTGGTTTCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS GCA 72 bp | ATGGCCTGCACCTCGTCTCTGGGACTCGGGTTTACTTaGAGAGATCTTCTGGGGAAGACAACCTTCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: MACTSSLGLGFT*RDLLGKTTFFL Trigger: CAAAAAGAAGGTTGTCTTCCCCAGAAGATCTCTGCAAGTAAACCCGAGTCCCAGAGACGAGGTGCAGGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160893.2 |
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| CDS GCA 72 bp | CCAGGAACAGAAACCACAGAGATGTCCCCAGGACTGTaGTTTGACATCCCATCTGGTGTTTCCAGACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PGTETTEMSPGL*FDIPSGVSRLD Trigger: ATCCAGTCTGGAAACACCAGATGGGATGTCAAAGCACAGTCCTGGGGACATCTCTGTGGTTTCTGTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS GCA 72 bp | AGGCCTCTGTCATCTCCTCAGTGGTATCCAGATCACTaGCCAAGGCACTCTCCAAAAGTACGTCTGATGCAT | + |
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Preference number: 6 (lower is better) Translates to: RPLSSPQWYPDH*PRHSPKVRLMH Trigger: ATGCATCAGACGTACTTTTGGAGAGTGCCTTGGGCAGTGATCTGGATACCACTGAGGAGATGACAGAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CAA 72 bp | GAACAGAAACCACAGAGATGTCCCCAGGACTGTGCTTaGACATCCCATCTGGTGTTTCCAGACTGGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: EQKPQRCPQDCA*TSHLVFPDWMV Trigger: CACCATCCAGTCTGGAAACACCAGATGGGATGTCAAAGCACAGTCCTGGGGACATCTCTGTGGTTTCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CAA 90 bp | TACTTGCAGAGATCTTCTGGGGAAGACAACCTTCTTTTTGATCTTTaGGCACAAAGGCAGGAGGCCCATGGCCTTCCTCCTGGTCACTTG | + |
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Preference number: 6 (lower is better) Translates to: YLQRSSGEDNLLFDL*AQRQEAHGLPPGHL Trigger: CAAGTGACCAGGAGGAAGGCCATGGGCCTCCTGCCTTTGTGCCAAAAGATCAAAAAGAAGGTTGTCTTCCCCAGAAGATCTCTGCAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160893.2 |
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| CDS GCA 72 bp | TTTTCTCTCTCGGGCTTCCTGCAGTTTCCTGAGCTCTaGTTCCCGTTCAGTTTTGCTCTGTTTGCTTCGAAC | + |
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Preference number: 6 (lower is better) Translates to: FSLSGFLQFPEL*FPFSFALFASN Trigger: GTTCGAAGCAAACAGAGCAAAACTGAACGGGAAGCAGAGCTCAGGAAACTGCAGGAAGCCCGAGAGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160107.2 |
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| CDS GCA 72 bp | GAGAGCTGTTCCCCTTCGAGCTTTAGGTACATAGAGTaGCATGTCAGGCCTTTTGGTTCGAACTCTACATCT | + |
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Preference number: 6 (lower is better) Translates to: ESCSPSSFRYIE*HVRPFGSNSTS Trigger: AGATGTAGAGTTCGAACCAAAAGGCCTGACATGGCACTCTATGTACCTAAAGCTCGAAGGGGAACAGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026188.10 ENSMUST00000160893.2 |
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| CDS CAA 90 bp | AAGAGAAACGTTATCCACAGTCTCAAGAATGGAATCTACACCTTTTaGACCCAAGACAGACTCTGTACTGTTGACTGTACCCTCACTCTC | + |
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Preference number: 6 (lower is better) Translates to: KRNVIHSLKNGIYTF*TQDRLCTVDCTLTL Trigger: GAGAGTGAGGGTACAGTCAACAGTACAGAGTCTGTCTTGGGTCAAAAAGGTGTAGATTCCATTCTTGAGACTGTGGATAACGTTTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS TCA 72 bp | CTACACCTTTTTGACCCAAGACAGACTCTGTACTGTTaGCTGTACCCTCACTCTCAACTTCAAAGTCTACAA | + |
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Preference number: 6 (lower is better) Translates to: LHLFDPRQTLYC*LYPHSQLQSLQ Trigger: TTGTAGACTTTGAAGTTGAGAGTGAGGGTACAGTCAACAGTACAGAGTCTGTCTTGGGTCAAAAAGGTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS TCA 72 bp | TTATCCACAGTCTCAAGAATGGAATCTACACCTTTTTaGCCCAAGACAGACTCTGTACTGTTGACTGTACCC | + |
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Preference number: 6 (lower is better) Translates to: LSTVSRMESTPF*PKTDSVLLTVP Trigger: GGGTACAGTCAACAGTACAGAGTCTGTCTTGGGTCAAAAAGGTGTAGATTCCATTCTTGAGACTGTGGATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CAA 72 bp | GTTATCCACAGTCTCAAGAATGGAATCTACACCTTTTaGACCCAAGACAGACTCTGTACTGTTGACTGTACC | + |
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Preference number: 6 (lower is better) Translates to: VIHSLKNGIYTF*TQDRLCTVDCT Trigger: GGTACAGTCAACAGTACAGAGTCTGTCTTGGGTCAAAAAGGTGTAGATTCCATTCTTGAGACTGTGGATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CAA 90 bp | TCTCTAGTCACTGCTGGATCAATAGTGCCATTTGTGCTCTCTAATTaGCTGACTACCGCCATTTTAAGAGAAACGTTATCCACAGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SLVTAGSIVPFVLSN*LTTAILRETLSTVS Trigger: TGAGACTGTGGATAACGTTTCTCTTAAAATGGCGGTAGTCAGCAAATTAGAGAGCACAAATGGCACTATTGATCCAGCAGTGACTAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS TCA 72 bp | TCCCAGCTTTCCTCCACAGCACTACTTCCTTGTATGTaGGAAGTGTCTGTTGTTTTTAGATCTACAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: SQLSSTALLPCM*EVSVVFRSTDV Trigger: AACATCTGTAGATCTAAAAACAACAGACACTTCTCACATACAAGGAAGTAGTGCTGTGGAGGAAAGCTGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CCA 72 bp | CAACTTGAGGAAATTGGGAGACTAGCTCTGGAACTTTaGCCTCAGTTACAATGCTGCTTTCCAAATTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: QLEEIGRLALEL*PQLQCCFPNFY Trigger: ATAGAAATTTGGAAAGCAGCATTGTAACTGAGGCCAAAGTTCCAGAGCTAGTCTCCCAATTTCCTCAAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS GCA 72 bp | CACTCATTTCTATATAATCTGAGAAATTTCTCATGTTaGCACTACTCTCACCAGATTCTCCAACTGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: HSFLYNLRNFSC*HYSHQILQLHL Trigger: CAGGTGCAGTTGGAGAATCTGGTGAGAGTAGTGGCAACATGAGAAATTTCTCAGATTATATAGAAATGAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CCA 72 bp | GACAAGTGGCAATATTACTATCAGCAGTCTTCTTTATaGGTAAAGAGGAAGCACCATCTGACACACTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: DKWQYYYQQSSL*VKRKHHLTHFL Trigger: TAGAAAGTGTGTCAGATGGTGCTTCCTCTTTACCCATAAAGAAGACTGCTGATAGTAATATTGCCACTTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CCA 72 bp | ATGCATCTGACATACTCAGTTCAGAGTCCAGACAAGTaGCAATATTACTATCAGCAGTCTTCTTTATGGGTA | + |
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Preference number: 6 (lower is better) Translates to: MHLTYSVQSPDK*QYYYQQSSLWV Trigger: TACCCATAAAGAAGACTGCTGATAGTAATATTGCCACTTGTCTGGACTCTGAACTGAGTATGTCAGATGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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| CDS CAA 90 bp | AGCTTTCCTCCACAGCACTACTTCCTTGTATGTGAGAAGTGTCTGTaGTTTTTAGATCTACAGATGTTTCCACAGATGAATCAGAAAATG | + |
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Preference number: 6 (lower is better) Translates to: SFPPQHYFLVCEKCL*FLDLQMFPQMNQKM Trigger: CATTTTCTGATTCATCTGTGGAAACATCTGTAGATCTAAAAACAACAGACACTTCTCACATACAAGGAAGTAGTGCTGTGGAGGAAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026188.10 |
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