Pregenerated sensors for R3HCC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034194Ensembl transcript IDs: ENSMUST00000118374.8, ENSMUST00000121142.4
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGGGTCCTCTCCCTTaGTGCCTGGGATGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLLCPIAAPVRAKGLSWYLGPLP*CLGWRL Trigger: CAGCCTCCATCCCAGGCATCAAGGGAGAGGACCCAG...ATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | AAGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTAGAGGACCACGGTACTTaGTGGGATGGGAGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KPAVPHSSSSEGKGAVLVEDHGT*WDGRQE Trigger: CTCCTGCCTCCCATCCCAGCAAGTACCGTGGTCCTC...TACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | GTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCTGGGTCACGATGCCAGCGTCCTaGTGGAGCACCTCGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: VSVKACGTGPQPNSESWVTMPAS*WSTSGT Trigger: GGTCCCCGAGGTGCTCCAGCAGGACGCTGGCATCGT...GACCCAGCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | GCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAGGCTTCCGTCCACGATaGCAGCGTCCTGCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: AVPHSSSSEGKGAVLVSVGFRPR*QRPAGA Trigger: TGCTCCAGCAGGACGCTGGCATCGTGGACGGAAGCC...TACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | TCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCTGGGTCCGGTTCTCCGCCGTTCGATaGATCAGGTACCGCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SVKACGTGPQPNSESWVRFSAVR*IRYRRR Trigger: CCGCCTGCGGTACCTGATCCATCGAACGGCGGAGAA...CCGGACCCAGCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | GTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCTGGGTCCGGTACTTGCTGGGATaGGAGGCAGGAGGGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VSVKACGTGPQPNSESWVRYLLG*EAGGRQ Trigger: CTGCCGCCCTCCTGCCTCCCATCCCAGCAAGTACCG...GACCCAGCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | GTCCTGGTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCATGCCAGCGTCCTGCTaGAGCACCTCGGGGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: VLVSVKACGTGPQPNSESMPASC*STSGTS Trigger: GCTGGTCCCCGAGGTGCTCCAGCAGGACGCTGGCAT...GCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATACCAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | GTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGCTGGGTCCTCTCCCTTaGTGCCTGGGATGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPHSSSSEGKGAVLVSVKLGPLP*CLGWRL Trigger: CAGCCTCCATCCCAGGCATCAAGGGAGAGGACCCAG...CTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | GTCCTGGTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCGGCTTCCGTCCACGATaGCAGCGTCCTGCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VLVSVKACGTGPQPNSESGFRPR*QRPAGA Trigger: TGCTCCAGCAGGACGCTGGCATCGTGGACGGAAGCC...GCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATACCAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | GCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTATTCTCCGCCGTTCGATaGATCAGGTACCGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AVPHSSSSEGKGAVLVSVFSAVR*IRYRRR Trigger: CCGCCTGCGGTACCTGATCCATCGAACGGCGGAGAA...TACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | TCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTGGGGACCACGGTACTTGCTaGGATGGGAGGCAGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSEGKGAVLVSVKACGTGDHGTC*DGRQEG Trigger: GCCCTCCTGCCTCCCATCCCAGCAAGTACCGTGGTC...CCCAGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTATGCCAGCGTCCTGCTaGAGCACCTCGGGGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSSEGKGAVLVSVKACGTMPASC*STSGTS Trigger: GCTGGTCCCCGAGGTGCTCCAGCAGGACGCTGGCAT...AGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | TCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCTGGGTCCGGATCTCCTCCTCCTCTTaGTCCACCAGGCTCCGCATC | + |
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Preference number: 4 (lower is better) Translates to: SVKACGTGPQPNSESWVRISSSS*STRLRI Trigger: GATGCGGAGCCTGGTGGACCAAGAGGAGGAGGAGAT...CCGGACCCAGCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | GTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGCAGTGCCTCGAGTGCTaGGGCAGGGCAGGGAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: VPHSSSSEGKGAVLVSVKQCLEC*GRAGKD Trigger: ATCTTTCCCTGCCCTGCCTCAGCACTCGAGGCACTG...CTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | AGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTGAGGACCACGGTACTTaGTGGGATGGGAGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SSSSEGKGAVLVSVKACGEDHGT*WDGRQE Trigger: CTCCTGCCTCCCATCCCAGCAAGTACCGTGGTCCTC...ACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | AGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATTCGACCCGCTCTTTCTaGTTGCCTGTGTCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLLCPIAAPVRAKGLSWYSTRSF*LPVSSS Trigger: GGAAGAGGACACAGGCAAGCAGAAAGAGCGGGTCGA...ATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | AAGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCGACCCGCTCTTTCTaGTTGCCTGTGTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPAVPHSSSSEGKGAVLVSTRSF*LPVSSS Trigger: GGAAGAGGACACAGGCAAGCAGAAAGAGCGGGTCGA...TACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | CATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGACCACGGTACTTGCTaGGATGGGAGGCAGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HSSSSEGKGAVLVSVKACDHGTC*DGRQEG Trigger: GCCCTCCTGCCTCCCATCCCAGCAAGTACCGTGGTC...ACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | GTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCTGGGTCCCAGCAGCTGCTCCCTaGTGTGAGGTATACCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VSVKACGTGPQPNSESWVPAAAP*CEVYRG Trigger: TCCTCGGTATACCTCACATCAGGGAGCAGCTGCTGG...GACCCAGCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | GCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAGGCTCCGCATCCCATaGCTCCTATTTTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVPHSSSSEGKGAVLVSVRLRIP*LLFSSS Trigger: GGAGGAGGAAAATAGGAGTCATGGGATGCGGAGCCT...TACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | CATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTCGGTCAGGTTGGCTGTaGTCTCCTGCAGCAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: HSSSSEGKGAVLVSVKACRSGWL*SPAAAH Trigger: GTGAGCTGCTGCAGGAGATCACAGCCAACCTGACCG...ACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | GTCCTGGTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCCTCATTTGCATGGCCTaGGTCGGGGCTCTTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VLVSVKACGTGPQPNSESLICMA*VGALQE Trigger: CTCCTGAAGAGCCCCGACCCAGGCCATGCAAATGAG...GCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATACCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | GCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTATATTTTCCTCCTCCATaGCCAGTTGTGCGCCGGACC | + |
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Preference number: 4 (lower is better) Translates to: AVPHSSSSEGKGAVLVSVYFPPP*PVVRRT Trigger: GGTCCGGCGCACAACTGGCCATGGAGGAGGAAAATA...TACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | TCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTGGGATCTCCTCCTCCTCTTaGTCCACCAGGCTCCGCATC | + |
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Preference number: 4 (lower is better) Translates to: SSEGKGAVLVSVKACGTGISSSS*STRLRI Trigger: GATGCGGAGCCTGGTGGACCAAGAGGAGGAGGAGAT...CCCAGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | AAGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTAGGAACTCAGAGAAAGTaGCCAACAGGTCCTCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KPAVPHSSSSEGKGAVLVGTQRK*PTGPRS Trigger: AGACCGAGGACCTGTTGGCCACTTTCTCTGAGTTCC...TACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | CTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGACTCTGATGTCCAGGTaGCAAATGACTGTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLCPIAAPVRAKGLSWYLTLMSR*QMTVLL Trigger: GAGGAGGACAGTCATTTGTCACCTGGACATCAGAGT...CAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | AGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTTCTAGGCTCTTCTTCTaGCACTGCACCAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSSSEGKGAVLVSVKACGSRLFF*HCTSWV Trigger: GACCCAGCTGGTGCAGTGTCAGAAGAAGAGCCTAGA...ACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | TCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTGGGAGGCTCCGCATCCCATaGCTCCTATTTTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSEGKGAVLVSVKACGTGRLRIP*LLFSSS Trigger: GGAGGAGGAAAATAGGAGTCATGGGATGCGGAGCCT...CCCAGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | AGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTGCTTTCAGCTTGGACTaGTTGGTCCCCTGTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SSSSEGKGAVLVSVKACGAFSLD*LVPCVS Trigger: GCTCACACAGGGGACCAAGCAGTCCAAGCTGAAAGC...ACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | AGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTTATTTTCCTCCTCCATaGCCAGTTGTGCGCCGGACC | + |
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Preference number: 4 (lower is better) Translates to: SSSSEGKGAVLVSVKACGYFPPP*PVVRRT Trigger: GGTCCGGCGCACAACTGGCCATGGAGGAGGAAAATA...ACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | TCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTGGGGCAAGGCTTTCAGCTTaGACTGCTTGGTCCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SSEGKGAVLVSVKACGTGARLSA*TAWSPV Trigger: CACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGC...CCCAGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | CATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTTCTAGGCTCTTCTTCTaGCACTGCACCAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: HSSSSEGKGAVLVSVKACSRLFF*HCTSWV Trigger: GACCCAGCTGGTGCAGTGTCAGAAGAAGAGCCTAGA...ACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | CTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGCTCTTCAGGAGCTCTTaGGTCACCAACATGGCAATT | + |
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Preference number: 4 (lower is better) Translates to: LLCPIAAPVRAKGLSWYLLFRSS*VTNMAI Trigger: AATTGCCATGTTGGTGACTCAAGAGCTCCTGAAGAG...CAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | GCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTACCACCCACTGGATTCTaGATCCCTTCTCTTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: AVPHSSSSEGKGAVLVSVPPTGF*IPSLGT Trigger: AGTTCCAAGAGAAGGGATTCAGAATCCAGTGGGTGG...TACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | GTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCTGGGTCAAGATGCCGATAGCATaGGTGTCATCCACCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: VSVKACGTGPQPNSESWVKMPIA*VSSTHW Trigger: CCAGTGGGTGGATGACACTCATGCTATCGGCATCTT...GACCCAGCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | GTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGTCCACCTTCCCTTCCTaGGCATCAGTCTTCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VPHSSSSEGKGAVLVSVKSTFPS*ASVFSS Trigger: GGAAGAGAAGACTGATGCGCAGGAAGGGAAGGTGGA...CTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | GTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGACCGCTGAATCTGTCTaGGGCCTCTCCTTCGATAGT | + |
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Preference number: 4 (lower is better) Translates to: VPHSSSSEGKGAVLVSVKTAESV*GLSFDS Trigger: ACTATCGAAGGAGAGGCCGCAGACAGATTCAGCGGT...CTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | AGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTGCAAGGCTTTCAGCTTaGACTGCTTGGTCCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SSSEGKGAVLVSVKACGTARLSA*TAWSPV Trigger: CACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGC...AGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CCA 90 bp | GCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAGATGGCAGAACACTTaGGGGAGTAGGCAGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: AVPHSSSSEGKGAVLVSVRWQNT*GSRQLF Trigger: AAAGAGCTGCCTACTCCCCCAAGTGTTCTGCCATCT...TACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | CATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTTGTCCAGGTGACAAATaGCTGTCCTCCTCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HSSSSEGKGAVLVSVKACCPGDK*LSSSSS Trigger: GCTGGAAGAGGAGGACAGTCATTTGTCACCTGGACA...ACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | AGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTTGTCCAGGTGACAAATaGCTGTCCTCCTCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSSEGKGAVLVSVKACGTCPGDK*LSSSSS Trigger: GCTGGAAGAGGAGGACAGTCATTTGTCACCTGGACA...AGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | GTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGACTCTGATGTCCAGGTaGCAAATGACTGTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VPHSSSSEGKGAVLVSVKTLMSR*QMTVLL Trigger: GAGGAGGACAGTCATTTGTCACCTGGACATCAGAGT...CTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR TCA 90 bp | GTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCTGGGTCCCACCCACTGGATTCTaGATCCCTTCTCTTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: VSVKACGTGPQPNSESWVPPTGF*IPSLGT Trigger: AGTTCCAAGAGAAGGGATTCAGAATCCAGTGGGTGG...GACCCAGCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR GCA 90 bp | AGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTTCCACCTTCCCTTCCTaGGCATCAGTCTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSEGKGAVLVSVKACGTSTFPS*ASVFSS Trigger: GGAAGAGAAGACTGATGCGCAGGAAGGGAAGGTGGA...AGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR GCA 90 bp | CATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTACCGCTGAATCTGTCTaGGGCCTCTCCTTCGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSSSSEGKGAVLVSVKACTAESV*GLSFDS Trigger: ACTATCGAAGGAGAGGCCGCAGACAGATTCAGCGGT...ACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTGGAACTCAGAGAAAGTaGCCAACAGGTCCTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSEGKGAVLVSVKACGTGTQRK*PTGPRS Trigger: AGACCGAGGACCTGTTGGCCACTTTCTCTGAGTTCC...AGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CCA 90 bp | GTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGAGATGGCAGAACACTTaGGGGAGTAGGCAGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPHSSSSEGKGAVLVSVKRWQNT*GSRQLF Trigger: AAAGAGCTGCCTACTCCCCCAAGTGTTCTGCCATCT...CTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGGCGGATGTGTCCAGGTaGATCTTCTCTATTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLCPIAAPVRAKGLSWYLADVSR*IFSILI Trigger: GATTAAAATAGAGAAGATCCACCTGGACACATCCGC...CAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTCTGAATCCCTTCTCTTaGAACTCAGAGAAAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSEGKGAVLVSVKACGLNPFS*NSEKVA Trigger: GGCCACTTTCTCTGAGTTCCAAGAGAAGGGATTCAG...ACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR TCA 90 bp | AGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTCTCTTCAGGAGCTCTTaGGTCACCAACATGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSSEGKGAVLVSVKACGTLFRSS*VTNMAI Trigger: AATTGCCATGTTGGTGACTCAAGAGCTCCTGAAGAG...AGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR TCA 90 bp | ATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATAGCCAGTGCCTCGAGTGCTaGGGCAGGGCAGGGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISSQFLRADQLKPAVPHSQCLEC*GRAGKD Trigger: ATCTTTCCCTGCCCTGCCTCAGCACTCGAGGCACTG...GCTATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATAGCCATCTGTGGCTCATTTaGATGGCCTGGGTCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISSQFLRADQLKPAVPHSHLWLI*MAWVGA Trigger: AGCCCCGACCCAGGCCATGCAAATGAGCCACAGATG...GCTATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CCA 90 bp | GTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGGATGTGTCCAGGTaGATCTTCTCTATTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: VPHSSSSEGKGAVLVSVKADVSR*IFSILI Trigger: GATTAAAATAGAGAAGATCCACCTGGACACATCCGC...CTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR TCA 90 bp | TTTATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATCGGTCAGGTTGGCTGTaGTCTCCTGCAGCAGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FISSQFLRADQLKPAVPHRSGWL*SPAAAH Trigger: GTGAGCTGCTGCAGGAGATCACAGCCAACCTGACCG...ATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATAGCGCTTTCAGCTTGGACTaGTTGGTCCCCTGTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISSQFLRADQLKPAVPHSAFSLD*LVPCVS Trigger: GCTCACACAGGGGACCAAGCAGTCCAAGCTGAAAGC...GCTATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CCA 90 bp | TTTATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATCTCATTTGCATGGCCTaGGTCGGGGCTCTTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FISSQFLRADQLKPAVPHLICMA*VGALQE Trigger: CTCCTGAAGAGCCCCGACCCAGGCCATGCAAATGAG...ATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR TCA 90 bp | TTTATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATAAGATGCCGATAGCATaGGTGTCATCCACCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FISSQFLRADQLKPAVPHKMPIA*VSSTHW Trigger: CCAGTGGGTGGATGACACTCATGCTATCGGCATCTT...ATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATAGCCTGAATCCCTTCTCTTaGAACTCAGAGAAAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISSQFLRADQLKPAVPHSLNPFS*NSEKVA Trigger: GGCCACTTTCTCTGAGTTCCAAGAGAAGGGATTCAG...GCTATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS TCA 90 bp | ACCGGTCCACCTTGCCTGCGTAGCACCCGGGGCACATACAGAGGCTaGTCCGGCTTCCGTCCACGATGCCAGCGTCCTGCTGGAGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TGPPCLRSTRGTYRG*SGFRPRCQRPAGAP Trigger: AGGTGCTCCAGCAGGACGCTGGCATCGTGGACGGAAGCCGGATCAGCCTCTGTATGTGCCCCGGGTGCTACGCAGGCAAGGTGGACCGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | CTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGCTCCTCCATGGCCAGTaGTGCGCCGGACCCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLCPIAAPVRAKGLSWYLLLHGQ*CAGPLL Trigger: CAGCAGGGGTCCGGCGCACAACTGGCCATGGAGGAG...CAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | CTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGCGAGGACCACGGTACTaGCTGGGATGGGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLCPIAAPVRAKGLSWYLRGPRY*LGWEAG Trigger: TCCTGCCTCCCATCCCAGCAAGTACCGTGGTCCTCG...CAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | AAGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTACCATCTGTGGCTCATTaGCATGGCCTGGGTCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPAVPHSSSSEGKGAVLVPSVAH*HGLGRG Trigger: GCCCCGACCCAGGCCATGCAAATGAGCCACAGATGG...TACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | GTCCTGGTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCCTCCTCCATGGCCAGTaGTGCGCCGGACCCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLVSVKACGTGPQPNSESLLHGQ*CAGPLL Trigger: CAGCAGGGGTCCGGCGCACAACTGGCCATGGAGGAG...GCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATACCAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS TCA 90 bp | CCCTCTATCTCCTCCTCCTCTTGGTCCACCAGGCTCCGCATCCCATaGCTCCTATTTTCCTCCTCCATGGCCAGTTGTGCGCCGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSISSSSWSTRLRIP*LLFSSSMASCAPDP Trigger: GGGGTCCGGCGCACAACTGGCCATGGAGGAGGAAAATAGGAGTCATGGGATGCGGAGCCTGGTGGACCAAGAGGAGGAGGAGATAGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS GCA 90 bp | CTTTCTTTCTGTTGTGTTGGAGTCCCAAGGCCCGGGCCACCAGCCTaGGGGCCACCGCTGAATCTGTCTGCGGCCTCTCCTTCGATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSFCCVGVPRPGPPA*GPPLNLSAASPSIV Trigger: GACTATCGAAGGAGAGGCCGCAGACAGATTCAGCGGTGGCCCGCAGGCTGGTGGCCCGGGCCTTGGGACTCCAACACAACAGAAAGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS TCA 90 bp | ATCAGCCTCAGCGTCCCCAGCACCAGCCTCTCTAGGCTCTTCTTCTaGCACTGCACCAGCTGGGTCCTCTCCCTTGATGCCTGGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: ISLSVPSTSLSRLFF*HCTSWVLSLDAWDG Trigger: TCCATCCCAGGCATCAAGGGAGAGGACCCAGCTGGTGCAGTGTCAGAAGAAGAGCCTAGAGAGGCTGGTGCTGGGGACGCTGAGGCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS GCA 90 bp | CGCAGGCGGCTGGAGACTGGGGGAAAAAGTAGGACCTTGGATAGCTaGTTCTGCAGCAGGAAACGATCGAGCTCCTCTTGGACCCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRLETGGKSRTLDS*FCSRKRSSSSWTRW Trigger: CCACCGGGTCCAAGAGGAGCTCGATCGTTTCCTGCTGCAGAAGCAGCTATCCAAGGTCCTACTTTTTCCCCCAGTCTCCAGCCGCCTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | GTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGCGAGGACCACGGTACTaGCTGGGATGGGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPHSSSSEGKGAVLVSVKRGPRY*LGWEAG Trigger: TCCTGCCTCCCATCCCAGCAAGTACCGTGGTCCTCG...CTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | GCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTATTCAGCTTGGACTGCTaGGTCCCCTGTGTGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVPHSSSSEGKGAVLVSVFSLDC*VPCVSG Trigger: CCCGCTCACACAGGGGACCAAGCAGTCCAAGCTGAA...TACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS GCA 90 bp | TCTGTCTGCGGCCTCTCCTTCGATAGTCGCAGGAACTTTGGCCTCTaGAAGGCTTTCAGCTTGGACTGCTTGGTCCCCTGTGTGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVCGLSFDSRRNFGL*KAFSLDCLVPCVSG Trigger: CCCGCTCACACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGCAGAGGCCAAAGTTCCTGCGACTATCGAAGGAGAGGCCGCAGACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS CCA 90 bp | GGGCTCCGTGTCACCCAACCCCATCTGTGGCTCATTTGCATGGCCTaGGTCGGGGCTCTTCAGGAGCTCTTGAGTCACCAACATGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GLRVTQPHLWLICMA*VGALQELLSHQHGN Trigger: ATTGCCATGTTGGTGACTCAAGAGCTCCTGAAGAGCCCCGACCCAGGCCATGCAAATGAGCCACAGATGGGGTTGGGTGACACGGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | CATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTCCATCTGTGGCTCATTaGCATGGCCTGGGTCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSSSSEGKGAVLVSVKACPSVAH*HGLGRG Trigger: GCCCCGACCCAGGCCATGCAAATGAGCCACAGATGG...ACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | GCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTATATCTCCTCCTCCTCTaGGTCCACCAGGCTCCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AVPHSSSSEGKGAVLVSVYLLLL*VHQAPH Trigger: ATGCGGAGCCTGGTGGACCAAGAGGAGGAGGAGATA...TACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS TCA 90 bp | GCGGATCTTGAGCACGGAGAAATCCTTGGCCAGTGCCTCGAGTGCTaGGGCAGGGCAGGGAAAGATGCCGATAGCATGAGTGTCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ADLEHGEILGQCLEC*GRAGKDADSMSVIH Trigger: GTGGATGACACTCATGCTATCGGCATCTTTCCCTGCCCTGCCTCAGCACTCGAGGCACTGGCCAAGGATTTCTCCGTGCTCAAGATCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | AAGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCCTCCGCATCCACCTaGTCTTCACCTTCATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: KPAVPHSSSSEGKGAVLVSSAST*SSPSSI Trigger: GATGGATGAAGGTGAAGACAAGGTGGATGCGGAGGA...TACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS TCA 90 bp | CAGGGACCAGAGGGGCCATCTGAACTGGGTACTCTGATGTCCAGGTaGCAAATGACTGTCCTCCTCTTCCAGCCCTCCCCAACAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QGPEGPSELGTLMSR*QMTVLLFQPSPTEK Trigger: CTTCTCTGTTGGGGAGGGCTGGAAGAGGAGGACAGTCATTTGTCACCTGGACATCAGAGTACCCAGTTCAGATGGCCCCTCTGGTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS GCA 90 bp | GATAGTCGCAGGAACTTTGGCCTCTGCAAGGCTTTCAGCTTGGACTaGTTGGTCCCCTGTGTGAGCGGGCGGATCTTGAGCACGGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DSRRNFGLCKAFSLD*LVPCVSGRILSTEK Trigger: TTTCTCCGTGCTCAAGATCCGCCCGCTCACACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGCAGAGGCCAAAGTTCCTGCGACTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS CCA 90 bp | AGCTGCTTCTGCAGCAGGAAACGATCGAGCTCCTCTTGGACCCGGTaGACAAAGTCATTTTCGGCCGAGGAGAGGAAGACACCGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SCFCSRKRSSSSWTR*TKSFSAEERKTPSK Trigger: CTTGGACGGTGTCTTCCTCTCCTCGGCCGAAAATGACTTTGTCCACCGGGTCCAAGAGGAGCTCGATCGTTTCCTGCTGCAGAAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | AGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATGCTCTTCAGGAGCTCTaGAGTCACCAACATGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLLCPIAAPVRAKGLSWYALQEL*SHQHGN Trigger: ATTGCCATGTTGGTGACTCAAGAGCTCCTGAAGAGC...ATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | AGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATAGCTGTCTCAGCCCCTaGTTCCTTTTCAGGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLCPIAAPVRAKGLSWYSCLSP*FLFRIL Trigger: GAGAATCCTGAAAAGGAACAAGGGGCTGAGACAGCT...ATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | AGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTTATCTCCTCCTCCTCTaGGTCCACCAGGCTCCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSSEGKGAVLVSVKACGTYLLLL*VHQAPH Trigger: ATGCGGAGCCTGGTGGACCAAGAGGAGGAGGAGATA...AGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | GTCCTGGTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCTCCTTTTCGGTCAGGTaGGCTGTGATCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLVSVKACGTGPQPNSESSFSVR*AVISCS Trigger: GCTGCAGGAGATCACAGCCAACCTGACCGAAAAGGA...GCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATACCAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | GTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGTGCAAGGCTTTCAGCTaGGACTGCTTGGTCCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPHSSSSEGKGAVLVSVKCKAFS*DCLVPC Trigger: ACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGCA...CTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | AGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATAGCTCTTTCTTTCTGTaGTGTTGGAGTCCCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLCPIAAPVRAKGLSWYSSFFL*CWSPKA Trigger: GGCCTTGGGACTCCAACACAACAGAAAGAAAGAGCT...ATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | AGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTTCCTTTTCGGTCAGGTaGGCTGTGATCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSEGKGAVLVSVKACGTSFSVR*AVISCS Trigger: GCTGCAGGAGATCACAGCCAACCTGACCGAAAAGGA...AGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | AAGCCTGCTGTGCCCCATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGAATCCCTTCTCTaGGAACTCAGAGAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPAVPHSSSSEGKGAVLVSESLL*ELRESG Trigger: GCCACTTTCTCTGAGTTCCAAGAGAAGGGATTCAGA...TACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATGGGGCACAGCAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
||
| CDS-3UTR CAA 90 bp | CATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTTGCAAGGCTTTCAGCTaGGACTGCTTGGTCCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSSSEGKGAVLVSVKACCKAFS*DCLVPC Trigger: ACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGCA...ACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CAA 90 bp | CATAGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTTTTCTTTCTGTTGTGTaGGAGTCCCAAGGCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSSSSEGKGAVLVSVKACFLSVV*ESQGPG Trigger: GCCCGGGCCTTGGGACTCCAACACAACAGAAAGAAA...ACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS TCA 90 bp | AGTGCCTCGAGTGCTGAGGCAGGGCAGGGAAAGATGCCGATAGCATaGGTGTCATCCACCCACTGGATTCTGAATCCCTTCTCTTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SASSAEAGQGKMPIA*VSSTHWILNPFSWN Trigger: GTTCCAAGAGAAGGGATTCAGAATCCAGTGGGTGGATGACACTCATGCTATCGGCATCTTTCCCTGCCCTGCCTCAGCACTCGAGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CCA 90 bp | ACCTTGGATAGCTGCTTCTGCAGCAGGAAACGATCGAGCTCCTCTTaGACCCGGTGGACAAAGTCATTTTCGGCCGAGGAGAGGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: TLDSCFCSRKRSSSS*TRWTKSFSAEERKT Trigger: TGTCTTCCTCTCCTCGGCCGAAAATGACTTTGTCCACCGGGTCCAAGAGGAGCTCGATCGTTTCCTGCTGCAGAAGCAGCTATCCAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CAA 90 bp | AGCAGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTGGAAAAAGTAGGACCTaGGATAGCTGCTTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSEGKGAVLVSVKACGGKSRT*DSCFCS Trigger: GCTGCAGAAGCAGCTATCCAAGGTCCTACTTTTTCC...ACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CAA 90 bp | AGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTGGAAAAAGTAGGACCTaGGATAGCTGCTTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSEGKGAVLVSVKACGTGKSRT*DSCFCS Trigger: GCTGCAGAAGCAGCTATCCAAGGTCCTACTTTTTCC...AGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CAA 90 bp | AGCTCCAGTGAGGGCAAAGGGGCTGTCCTGGTATCTGTAAAGGCGTGTGGTACTAGCTGTCTCAGCCCCTaGTTCCTTTTCAGGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSEGKGAVLVSVKACGTSCLSP*FLFRIL Trigger: GAGAATCCTGAAAAGGAACAAGGGGCTGAGACAGCT...AGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCACTGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CAA 90 bp | GTCCTGGTATCTGTAAAGGCGTGTGGTACTGGGCCCCAGCCTAATTCGGAGAGCTCTGAATCCCTTCTCTaGGAACTCAGAGAAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLVSVKACGTGPQPNSESSESLL*ELRESG Trigger: GCCACTTTCTCTGAGTTCCAAGAGAAGGGATTCAGA...GCTCTCCGAATTAGGCTGGGGCCCAGTACCACACGCCTTTACAGATACCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CAA 90 bp | ATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATAGCTTCAGCTTGGACTGCTaGGTCCCCTGTGTGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISSQFLRADQLKPAVPHSFSLDC*VPCVSG Trigger: CCCGCTCACACAGGGGACCAAGCAGTCCAAGCTGAA...GCTATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CAA 90 bp | ATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATAGCTTTCTTTCTGTTGTGTaGGAGTCCCAAGGCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ISSQFLRADQLKPAVPHSFLSVV*ESQGPG Trigger: GCCCGGGCCTTGGGACTCCAACACAACAGAAAGAAA...GCTATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CAA 90 bp | ATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATAGCAGCTCTTTCTTTCTGTaGTGTTGGAGTCCCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISSQFLRADQLKPAVPHSSSFFL*CWSPKA Trigger: GGCCTTGGGACTCCAACACAACAGAAAGAAAGAGCT...GCTATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS-3UTR CAA 90 bp | TTTATTTCTTCTCAATTTCTGAGAGCAGACCAACTAAAGCCTGCTGTGCCCCATTCCTCCGCATCCACCTaGTCTTCACCTTCATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FISSQFLRADQLKPAVPHSSAST*SSPSSI Trigger: GATGGATGAAGGTGAAGACAAGGTGGATGCGGAGGA...ATGGGGCACAGCAGGCTTTAGTTGGTCTGCTCTCAGAAATTGAGAAGAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS GCA 72 bp | AGGCTGATCCGGCTTCCGTCCACGATGCCAGCGTCCTaGTGGAGCACCTCGGGGACCAGCAGCTGCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLIRLPSTMPAS*WSTSGTSSCSL Trigger: CAGGGAGCAGCTGCTGGTCCCCGAGGTGCTCCAGCAGGACGCTGGCATCGTGGACGGAAGCCGGATCAGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS GCA 72 bp | TGCCTGGGATGGAGGCTGCCACCGGTCCACCTTGCCTaGGTAGCACCCGGGGCACATACAGAGGCTGATCCG | + |
|
Preference number: 6 (lower is better) Translates to: CLGWRLPPVHLA*VAPGAHTEADP Trigger: CGGATCAGCCTCTGTATGTGCCCCGGGTGCTACGCAGGCAAGGTGGACCGGTGGCAGCCTCCATCCCAGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CCA 72 bp | CTGATCCGGCTTCCGTCCACGATGCCAGCGTCCTGCTaGAGCACCTCGGGGACCAGCAGCTGCTCCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LIRLPSTMPASC*STSGTSSCSLM Trigger: CATCAGGGAGCAGCTGCTGGTCCCCGAGGTGCTCCAGCAGGACGCTGGCATCGTGGACGGAAGCCGGATCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS TCA 72 bp | CCTTGCCTGCGTAGCACCCGGGGCACATACAGAGGCTaGTCCGGCTTCCGTCCACGATGCCAGCGTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PCLRSTRGTYRG*SGFRPRCQRPA Trigger: AGCAGGACGCTGGCATCGTGGACGGAAGCCGGATCAGCCTCTGTATGTGCCCCGGGTGCTACGCAGGCAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 90 bp | TTGGTCCCCTGTGTGAGCGGGCGGATCTTGAGCACGGAGAAATCCTaGGCCAGTGCCTCGAGTGCTGAGGCAGGGCAGGGAAAGATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LVPCVSGRILSTEKS*ASASSAEAGQGKMP Trigger: CGGCATCTTTCCCTGCCCTGCCTCAGCACTCGAGGCACTGGCCAAGGATTTCTCCGTGCTCAAGATCCGCCCGCTCACACAGGGGACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS GCA 72 bp | GGGCTCCGTGTCACCCAACCCCATCTGTGGCTCATTTaGATGGCCTGGGTCGGGGCTCTTCAGGAGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLRVTQPHLWLI*MAWVGALQELL Trigger: CAAGAGCTCCTGAAGAGCCCCGACCCAGGCCATGCAAATGAGCCACAGATGGGGTTGGGTGACACGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS GCA 72 bp | CCCATGACTCCTATTTTCCTCCTCCATGGCCAGTTGTaGGCCGGACCCCTGCTGCACAGCTGTCTCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PMTPIFLLHGQL*AGPLLHSCLSP Trigger: GGGGCTGAGACAGCTGTGCAGCAGGGGTCCGGCGCACAACTGGCCATGGAGGAGGAAAATAGGAGTCATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CCA 72 bp | GGCTCCGCATCCCATGACTCCTATTTTCCTCCTCCATaGCCAGTTGTGCGCCGGACCCCTGCTGCACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSASHDSYFPPP*PVVRRTPAAQL Trigger: CAGCTGTGCAGCAGGGGTCCGGCGCACAACTGGCCATGGAGGAGGAAAATAGGAGTCATGGGATGCGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | TGTGTGAGCGGGCGGATCTTGAGCACGGAGAAATCCTaGGCCAGTGCCTCGAGTGCTGAGGCAGGGCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CVSGRILSTEKS*ASASSAEAGQG Trigger: TCCCTGCCCTGCCTCAGCACTCGAGGCACTGGCCAAGGATTTCTCCGTGCTCAAGATCCGCCCGCTCACACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | ACTTGGGGGAGTAGGCAGCTCTTTCTTTCTGTTGTGTaGGAGTCCCAAGGCCCGGGCCACCAGCCTGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TWGSRQLFLSVV*ESQGPGHQPAG Trigger: GCCCGCAGGCTGGTGGCCCGGGCCTTGGGACTCCAACACAACAGAAAGAAAGAGCTGCCTACTCCCCCAAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 90 bp | CAAGATGGCAGAACACTTGGGGGAGTAGGCAGCTCTTTCTTTCTGTaGTGTTGGAGTCCCAAGGCCCGGGCCACCAGCCTGCGGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: QDGRTLGGVGSSFFL*CWSPKARATSLRAT Trigger: GGTGGCCCGCAGGCTGGTGGCCCGGGCCTTGGGACTCCAACACAACAGAAAGAAAGAGCTGCCTACTCCCCCAAGTGTTCTGCCATCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS TCA 72 bp | TGGAGCACCTCGGGGACCAGCAGCTGCTCCCTGATGTaGGGTATACCGAGGACCACGGTACTTGCTGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: WSTSGTSSCSLM*GIPRTTVLAGM Trigger: CATCCCAGCAAGTACCGTGGTCCTCGGTATACCTCACATCAGGGAGCAGCTGCTGGTCCCCGAGGTGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 90 bp | GCTTTCAGCTTGGACTGCTTGGTCCCCTGTGTGAGCGGGCGGATCTaGAGCACGGAGAAATCCTTGGCCAGTGCCTCGAGTGCTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AFSLDCLVPCVSGRI*STEKSLASASSAEA Trigger: TGCCTCAGCACTCGAGGCACTGGCCAAGGATTTCTCCGTGCTCAAGATCCGCCCGCTCACACAGGGGACCAAGCAGTCCAAGCTGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CCA 72 bp | GGTCGGGGCTCTTCAGGAGCTCTTGAGTCACCAACATaGCAATTCCCTGATCAGCCTCAGCGTCCCCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GRGSSGALESPT*QFPDQPQRPQH Trigger: GTGCTGGGGACGCTGAGGCTGATCAGGGAATTGCCATGTTGGTGACTCAAGAGCTCCTGAAGAGCCCCGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | CATCCCATGACTCCTATTTTCCTCCTCCATGGCCAGTaGTGCGCCGGACCCCTGCTGCACAGCTGTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HPMTPIFLLHGQ*CAGPLLHSCLS Trigger: GCTGAGACAGCTGTGCAGCAGGGGTCCGGCGCACAACTGGCCATGGAGGAGGAAAATAGGAGTCATGGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | TTGGACTGCTTGGTCCCCTGTGTGAGCGGGCGGATCTaGAGCACGGAGAAATCCTTGGCCAGTGCCTCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LDCLVPCVSGRI*STEKSLASASS Trigger: ACTCGAGGCACTGGCCAAGGATTTCTCCGTGCTCAAGATCCGCCCGCTCACACAGGGGACCAAGCAGTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | AGTCGCAGGAACTTTGGCCTCTGCAAGGCTTTCAGCTaGGACTGCTTGGTCCCCTGTGTGAGCGGGCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SRRNFGLCKAFS*DCLVPCVSGRI Trigger: GATCCGCCCGCTCACACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGCAGAGGCCAAAGTTCCTGCGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 90 bp | CTGTGGCTCATTTGCATGGCCTGGGTCGGGGCTCTTCAGGAGCTCTaGAGTCACCAACATGGCAATTCCCTGATCAGCCTCAGCGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LWLICMAWVGALQEL*SHQHGNSLISLSVP Trigger: GGGGACGCTGAGGCTGATCAGGGAATTGCCATGTTGGTGACTCAAGAGCTCCTGAAGAGCCCCGACCCAGGCCATGCAAATGAGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 90 bp | AGTCGCAGGAACTTTGGCCTCTGCAAGGCTTTCAGCTTGGACTGCTaGGTCCCCTGTGTGAGCGGGCGGATCTTGAGCACGGAGAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRNFGLCKAFSLDC*VPCVSGRILSTEKS Trigger: GGATTTCTCCGTGCTCAAGATCCGCCCGCTCACACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGCAGAGGCCAAAGTTCCTGCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 90 bp | TCCTTCGATAGTCGCAGGAACTTTGGCCTCTGCAAGGCTTTCAGCTaGGACTGCTTGGTCCCCTGTGTGAGCGGGCGGATCTTGAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: SFDSRRNFGLCKAFS*DCLVPCVSGRILST Trigger: CGTGCTCAAGATCCGCCCGCTCACACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGCAGAGGCCAAAGTTCCTGCGACTATCGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 90 bp | CCGCTGAATCTGTCTGCGGCCTCTCCTTCGATAGTCGCAGGAACTTaGGCCTCTGCAAGGCTTTCAGCTTGGACTGCTTGGTCCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PLNLSAASPSIVAGT*ASARLSAWTAWSPV Trigger: CACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGCAGAGGCCAAAGTTCCTGCGACTATCGAAGGAGAGGCCGCAGACAGATTCAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS TCA 72 bp | TCCTCCTCCTCTTGGTCCACCAGGCTCCGCATCCCATaGCTCCTATTTTCCTCCTCCATGGCCAGTTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSWSTRLRIP*LLFSSSMASCA Trigger: CGCACAACTGGCCATGGAGGAGGAAAATAGGAGTCATGGGATGCGGAGCCTGGTGGACCAAGAGGAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS GCA 72 bp | AGGAACTTTGGCCTCTGCAAGGCTTTCAGCTTGGACTaGTTGGTCCCCTGTGTGAGCGGGCGGATCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RNFGLCKAFSLD*LVPCVSGRILS Trigger: GCTCAAGATCCGCCCGCTCACACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGCAGAGGCCAAAGTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CCA 72 bp | GTCACCCAACCCCATCTGTGGCTCATTTGCATGGCCTaGGTCGGGGCTCTTCAGGAGCTCTTGAGTCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: VTQPHLWLICMA*VGALQELLSHQ Trigger: TTGGTGACTCAAGAGCTCCTGAAGAGCCCCGACCCAGGCCATGCAAATGAGCCACAGATGGGGTTGGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | CGCAGGCGGCTGGAGACTGGGGGAAAAAGTAGGACCTaGGATAGCTGCTTCTGCAGCAGGAAACGATCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRLETGGKSRT*DSCFCSRKRSS Trigger: GCTCGATCGTTTCCTGCTGCAGAAGCAGCTATCCAAGGTCCTACTTTTTCCCCCAGTCTCCAGCCGCCTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | AACTTTGGCCTCTGCAAGGCTTTCAGCTTGGACTGCTaGGTCCCCTGTGTGAGCGGGCGGATCTTGAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: NFGLCKAFSLDC*VPCVSGRILST Trigger: CGTGCTCAAGATCCGCCCGCTCACACAGGGGACCAAGCAGTCCAAGCTGAAAGCCTTGCAGAGGCCAAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS TCA 72 bp | GAGGGGCCATCTGAACTGGGTACTCTGATGTCCAGGTaGCAAATGACTGTCCTCCTCTTCCAGCCCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGPSELGTLMSR*QMTVLLFQPSP Trigger: TGGGGAGGGCTGGAAGAGGAGGACAGTCATTTGTCACCTGGACATCAGAGTACCCAGTTCAGATGGCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CCA 72 bp | AGCTGCTTCTGCAGCAGGAAACGATCGAGCTCCTCTTaGACCCGGTGGACAAAGTCATTTTCGGCCGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SCFCSRKRSSSS*TRWTKSFSAEE Trigger: CTCCTCGGCCGAAAATGACTTTGTCCACCGGGTCCAAGAGGAGCTCGATCGTTTCCTGCTGCAGAAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | CTGTCTGCGGCCTCTCCTTCGATAGTCGCAGGAACTTaGGCCTCTGCAAGGCTTTCAGCTTGGACTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSAASPSIVAGT*ASARLSAWTAW Trigger: CCAAGCAGTCCAAGCTGAAAGCCTTGCAGAGGCCAAAGTTCCTGCGACTATCGAAGGAGAGGCCGCAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS GCA 72 bp | ACTGGGGGAAAAAGTAGGACCTTGGATAGCTGCTTCTaGAGCAGGAAACGATCGAGCTCCTCTTGGACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TGGKSRTLDSCF*SRKRSSSSWTR Trigger: CCGGGTCCAAGAGGAGCTCGATCGTTTCCTGCTGCAGAAGCAGCTATCCAAGGTCCTACTTTTTCCCCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CCA 72 bp | TGCAGCAGGAAACGATCGAGCTCCTCTTGGACCCGGTaGACAAAGTCATTTTCGGCCGAGGAGAGGAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: CSRKRSSSSWTR*TKSFSAEERKT Trigger: TGTCTTCCTCTCCTCGGCCGAAAATGACTTTGTCCACCGGGTCCAAGAGGAGCTCGATCGTTTCCTGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | ATTTGCATGGCCTGGGTCGGGGCTCTTCAGGAGCTCTaGAGTCACCAACATGGCAATTCCCTGATCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ICMAWVGALQEL*SHQHGNSLISL Trigger: GAGGCTGATCAGGGAATTGCCATGTTGGTGACTCAAGAGCTCCTGAAGAGCCCCGACCCAGGCCATGCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | CTTCTCTTCCTCCTCTCCCTCTATCTCCTCCTCCTCTaGGTCCACCAGGCTCCGCATCCCATGACTCCTATT | + |
|
Preference number: 6 (lower is better) Translates to: LLFLLSLYLLLL*VHQAPHPMTPI Trigger: AATAGGAGTCATGGGATGCGGAGCCTGGTGGACCAAGAGGAGGAGGAGATAGAGGGAGAGGAGGAAGAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CCA 72 bp | GTGTCATCCACCCACTGGATTCTGAATCCCTTCTCTTaGAACTCAGAGAAAGTGGCCAACAGGTCCTCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VSSTHWILNPFS*NSEKVANRSSV Trigger: GACCGAGGACCTGTTGGCCACTTTCTCTGAGTTCCAAGAGAAGGGATTCAGAATCCAGTGGGTGGATGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CCA 72 bp | CCGGGCAGCTCTTCTGTGAAGGCGGATGTGTCCAGGTaGATCTTCTCTATTTTAATCTCCTTTTCGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSSSVKADVSR*IFSILISFSVR Trigger: CCTGACCGAAAAGGAGATTAAAATAGAGAAGATCCACCTGGACACATCCGCCTTCACAGAAGAGCTGCCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 72 bp | AGTGTCATCCACCCACTGGATTCTGAATCCCTTCTCTaGGAACTCAGAGAAAGTGGCCAACAGGTCCTCGGT | + |
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Preference number: 6 (lower is better) Translates to: SVIHPLDSESLL*ELRESGQQVLG Trigger: ACCGAGGACCTGTTGGCCACTTTCTCTGAGTTCCAAGAGAAGGGATTCAGAATCCAGTGGGTGGATGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CAA 90 bp | GATAGCATGAGTGTCATCCACCCACTGGATTCTGAATCCCTTCTCTaGGAACTCAGAGAAAGTGGCCAACAGGTCCTCGGTCTTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: DSMSVIHPLDSESLL*ELRESGQQVLGLEC Trigger: ACACTCAAGACCGAGGACCTGTTGGCCACTTTCTCTGAGTTCCAAGAGAAGGGATTCAGAATCCAGTGGGTGGATGACACTCATGCTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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| CDS CCA 72 bp | AGAGAAAGTGGCCAACAGGTCCTCGGTCTTGAGTGTTaGCTTAAAGTCATAGATCTCCACCAGGTGGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: RESGQQVLGLEC*LKVIDLHQVGQ Trigger: TTGACCCACCTGGTGGAGATCTATGACTTTAAGCCAACACTCAAGACCGAGGACCTGTTGGCCACTTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118374.8 ENSMUST00000121142.4 |
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