Pregenerated sensors for QTRT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022704Ensembl transcript IDs: ENSMUST00000023387.14, ENSMUST00000131360.8, ENSMUST00000146343.8, ENSMUST00000156568.8, ENSMUST00000239112.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCCAGCAGGAAGCCCCCGACGGGTCGCTTGGCTGTCTCTCGTGCTaGCCTCAACCTCTCTTCCATCACATCTCCACCCTCAATCACTCC | + |
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Preference number: 1 (lower is better) Translates to: VQQEAPDGSLGCLSC*PQPLFHHISTLNHS Trigger: GGAGTGATTGAGGGTGGAGATGTGATGGAAGAGAGGTTGAGGTCAGCACGAGAGACAGCCAAGCGACCCGTCGGGGGCTTCCTGCTGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR CCA 90 bp | GATCCCCTTGAAAGCCGTCCAGCAGGAAGCCCCCGACGGGTCGCTTaGCTGTCTCTCGTGCTGACCTCAACCTCTCTTCCATCACATCTC | + |
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Preference number: 1 (lower is better) Translates to: DPLESRPAGSPRRVA*LSLVLTSTSLPSHL Trigger: GAGATGTGATGGAAGAGAGGTTGAGGTCAGCACGAGAGACAGCCAAGCGACCCGTCGGGGGCTTCCTGCTGGACGGCTTTCAAGGGGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR GCA 90 bp | CGAGCGGTCCACAGACTTCCTGGCCCGTTTTATGGAAGTTGTTTCTaGACAAGATGCTTCCCCATCCGAGAGGCACTGGAACCAATCTGG | + |
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Preference number: 1 (lower is better) Translates to: RAVHRLPGPFYGSCF*TRCFPIREALEPIW Trigger: CCAGATTGGTTCCAGTGCCTCTCGGATGGGGAAGCATCTTGTGCAGAAACAACTTCCATAAAACGGGCCAGGAAGTCTGTGGACCGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR TCA 90 bp | ACACGGACACAGACTTACTTGTTACATAACCAGCTGGGCCGGGGGTaGCTGGATCGTGCAGGGAACAATAGAAGAGTGATTCCGGCATGC | + |
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Preference number: 1 (lower is better) Translates to: TRTQTYLLHNQLGRG*LDRAGNNRRVIPAC Trigger: GCATGCCGGAATCACTCTTCTATTGTTCCCTGCACGATCCAGTCACCCCCGGCCCAGCTGGTTATGTAACAAGTAAGTCTGTGTCCGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR GCA 90 bp | AAGGATGGAGAGTATGACGCAGCTTCTGAACATTCTGCCTCCACCTaGGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAA | + |
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Preference number: 1 (lower is better) Translates to: KDGEYDAASEHSAST*DACPCLLTRGRTQK Trigger: TTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGTGGAGGCAGAATGTTCAGAAGCTGCGTCATACTCTCCATCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR CCA 90 bp | GCAAACAGCTGTCCAGGAACAGAAGCGAGCGGTCCACAGACTTCCTaGCCCGTTTTATGGAAGTTGTTTCTGCACAAGATGCTTCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: ANSCPGTEASGPQTS*PVLWKLFLHKMLPH Trigger: ATGGGGAAGCATCTTGTGCAGAAACAACTTCCATAAAACGGGCCAGGAAGTCTGTGGACCGCTCGCTTCTGTTCCTGGACAGCTGTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR GCA 90 bp | GTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAGCATTTaGCTGAGCTTACAGCTGTGTGGAATGGAAACCGATCTGCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: VPVYSRGDGHRKVSI*LSLQLCGMETDLLS Trigger: TGACAGCAGATCGGTTTCCATTCCACACAGCTGTAAGCTCAGGCAAATGCTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR CCA 90 bp | TCCATCACATCTCCACCCTCAATCACTCCAATGATCACACTTTTCTaGAGGACCTCAGACTCCTCCTGTAGTCGCAAACAGCTGTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: SITSPPSITPMITLF*RTSDSSCSRKQLSR Trigger: CCTGGACAGCTGTTTGCGACTACAGGAGGAGTCTGAGGTCCTCCAGAAAAGTGTGATCATTGGAGTGATTGAGGGTGGAGATGTGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR TCA 90 bp | ACCTCAACCTCTCTTCCATCACATCTCCACCCTCAATCACTCCAATaGTCACACTTTTCTGGAGGACCTCAGACTCCTCCTGTAGTCGCA | + |
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Preference number: 1 (lower is better) Translates to: TSTSLPSHLHPQSLQ*SHFSGGPQTPPVVA Trigger: TGCGACTACAGGAGGAGTCTGAGGTCCTCCAGAAAAGTGTGATCATTGGAGTGATTGAGGGTGGAGATGTGATGGAAGAGAGGTTGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR CCA 90 bp | TCTTGGATTCCATTTTGTTGCAATAGTGTCTCCTCAGGATTCAGCTaGCAATCAAAGGTGAAAGTCAGGGCACAGCCCCGCTCGGTCACT | + |
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Preference number: 1 (lower is better) Translates to: SWIPFCCNSVSSGFS*QSKVKVRAQPRSVT Trigger: AGTGACCGAGCGGGGCTGTGCCCTGACTTTCACCTTTGATTGCCAGCTGAATCCTGAGGAGACACTATTGCAACAAAATGGAATCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146343.8 ENSMUST00000156568.8 |
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| 3UTR TCA 90 bp | GAGGATCAAATAAAGGAATCCATGCCAATTCTCCCCTCTACATTCTaGAACCAGGGTAGCAGCCTTGATGGAGATTTCCCAGCTGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: EDQIKESMPILPSTF*NQGSSLDGDFPAGQ Trigger: TTGGCCAGCTGGGAAATCTCCATCAAGGCTGCTACCCTGGTTTCAGAATGTAGAGGGGAGAATTGGCATGGATTCCTTTATTTGATCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR GCA 90 bp | GCTTCCAACTCCTTTCTTATATTCTGCCAAGACTTCATGATGTTCTaGTATACAGGTCTCGCTGGGATCCAGGTTAGGACCCGAAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: ASNSFLIFCQDFMMF*YTGLAGIQVRTRRL Trigger: CAACCTTCGGGTCCTAACCTGGATCCCAGCGAGACCTGTATAGCAGAACATCATGAAGTCTTGGCAGAATATAAGAAAGGAGTTGGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131360.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGCAGGAAGCCCCCGACGGGTCGCTTGGCTGTCTCTCGTGCTGACCTCAACCTGTTTCTGCACAAGATaGTTCCCCATCCGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PAGSPRRVAWLSLVLTSTCFCTR*FPIREA Trigger: TGCCTCTCGGATGGGGAAGCATCTTGTGCAGAAACA...GGTTGAGGTCAGCACGAGAGACAGCCAAGCGACCCGTCGGGGGCTTCCTGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTCCACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGCTGTCAGGCCAGGATTaGGGCCACATCAACACACAG | + |
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Preference number: 2 (lower is better) Translates to: SASTCDACPCLLTRGRTQLSGQD*GHINTQ Trigger: CTGTGTGTTGATGTGGCCCCAATCCTGGCCTGACAG...CTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGTGGAGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR GCA 90 bp | GCAATCAAAGGTGAAAGTCAGGGCACAGCCCCGCTCGGTCACTTGATATGGGAAACGCAGAAACCCTCCTaGGCGCTGCAGCCAAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: AIKGESQGTAPLGHLIWETQKPS*ALQPRL Trigger: CAGCCTTGGCTGCAGCGCGCAGGAGGGTTTCTGCGT...TTCCCATATCAAGTGACCGAGCGGGGCTGTGCCCTGACTTTCACCTTTGATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131360.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGAAGCCCCCGACGGGTCGCTTGGCTGTCTCTCGTGCTGACCTCAACCTCTGACTTCATGATGTTCTaGTCTGGAAGCTTAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: AGSPRRVAWLSLVLTSTSDFMMF*SGSLGS Trigger: TGAACCTAAGCTTCCAGAGCAGAACATCATGAAGTC...AGAGGTTGAGGTCAGCACGAGAGACAGCCAAGCGACCCGTCGGGGGCTTCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146343.8 |
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| 3UTR-3UTR CCA 90 bp | TCACGAGGGGACGGACACAGAAAAGTCAGCATTTGCCTGAGCTTACAGCTGTGTCTCCTGTGGGCAGGGTaGGGCAGATGCTCTTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: SRGDGHRKVSICLSLQLCLLWAG*GRCSLV Trigger: GACCAAAGAGCATCTGCCCCACCCTGCCCACAGGAG...ACACAGCTGTAAGCTCAGGCAAATGCTGACTTTTCTGTGTCCGTCCCCTCGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | GCAATCAAAGGTGAAAGTCAGGGCACAGCCCCGCTCGGTCACTTGATATGGGAATGGGCCGGGGGTGACTaGATCGTGCAGGGAACAATA | + |
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Preference number: 2 (lower is better) Translates to: AIKGESQGTAPLGHLIWEWAGGD*IVQGTI Trigger: TATTGTTCCCTGCACGATCCAGTCACCCCCGGCCCA...TTCCCATATCAAGTGACCGAGCGGGGCTGTGCCCTGACTTTCACCTTTGATTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR CAA 90 bp | ACAGAAGCGAGCGGTCCACAGACTTCCTGGCCCGTTTTATGGAAGTaGTTTCTGCACAAGATGCTTCCCCATCCGAGAGGCACTGGAACC | + |
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Preference number: 2 (lower is better) Translates to: TEASGPQTSWPVLWK*FLHKMLPHPRGTGT Trigger: GGTTCCAGTGCCTCTCGGATGGGGAAGCATCTTGTGCAGAAACAACTTCCATAAAACGGGCCAGGAAGTCTGTGGACCGCTCGCTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR-3UTR GCA 90 bp | ACACCAGCCAGCAGCTCGTTGGTCATCAGAAGATGGTGGATATACGCACGAGTGGCACACACAAAGCTGTaGGCTCCATTCCCAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: TPASSSLVIRRWWIYARVAHTKL*APFPGL Trigger: CAGTCCTGGGAATGGAGCGCACAGCTTTGTGTGTGC...CACTCGTGCGTATATCCACCATCTTCTGATGACCAACGAGCTGCTGGCTGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR GCA 90 bp | CGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAGCATTTGCAGATGAGCCTCCTTaGTCCCACACTTCCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RCLSLFTHEGTDTEKSAFADEPP*SHTSQP Trigger: AGGCTGGGAAGTGTGGGAGCAAGGAGGCTCATCTGC...AAATGCTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | GGGACAACCAGCCTCAGGGTCAGAAGAATGCCAATTCACCAACCACTTCAAAATTCCTCCACACTCCTGTaGGCAGGGTGGGGCAGATGC | + |
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Preference number: 2 (lower is better) Translates to: GTTSLRVRRMPIHQPLQNSSTLL*AGWGRC Trigger: GCATCTGCCCCACCCTGCCCACAGGAGTGTGGAGGA...ATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGACCCTGAGGCTGGTTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTCCACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGCCTCACCCATCTCACTaGTTCCTAAAACCTCAAATC | + |
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Preference number: 2 (lower is better) Translates to: SASTCDACPCLLTRGRTQPHPSH*FLKPQI Trigger: GATTTGAGGTTTTAGGAACCAGTGAGATGGGTGAGG...CTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGTGGAGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGCTGGCAATCAAAGGTGAAAGTCAGGGCACAGCCCCGCTCGGTCACTTGCTGAAGACAAAGGTATaGCCCAAAGCCCCTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: IQLAIKGESQGTAPLGHLLKTKV*PKAPES Trigger: GCTCTCAGGGGCTTTGGGCCATACCTTTGTCTTCAG...CAAGTGACCGAGCGGGGCTGTGCCCTGACTTTCACCTTTGATTGCCAGCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCCTCCACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAGCTTACAGCTGTGTaGAATGGAAACCGATCTGCT | + |
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Preference number: 2 (lower is better) Translates to: FCLHLRCLSLFTHEGTDTELTAV*NGNRSA Trigger: AGCAGATCGGTTTCCATTCCACACAGCTGTAAGCTC...TGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGTGGAGGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTCGTTGGTCATCAGAAGATGGTGGATATACGCACGAGTGTGGTTCTTACCTGTGCTTCCAGCTATaGCAGCCATCTCCACTCGGG | + |
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Preference number: 2 (lower is better) Translates to: AARWSSEDGGYTHECGSYLCFQL*QPSPLG Trigger: CCCGAGTGGAGATGGCTGTCATAGCTGGAAGCACAG...GTAAGAACCACACTCGTGCGTATATCCACCATCTTCTGATGACCAACGAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCCCGTTTTATGGAAGTTGTTTCTGCACAAGATGCTTCCCCATCCGAGAGGGCTGCAGGGCCTCCTaGATTGCCATGAACTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PGPFYGSCFCTRCFPIREGCRAS*IAMNLE Trigger: TTCCAAGTTCATGGCAATTCAGGAGGCCCTGCAGCC...CTCTCGGATGGGGAAGCATCTTGTGCAGAAACAACTTCCATAAAACGGGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR-3UTR TCA 90 bp | AACTCTCAAACAAGTCCACTCCCCTTTCGATGCACTCTAGCACTTCGTCTGGCCGGCTGTCTCTCGTGCTaGCCTCAACCTCTCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: NSQTSPLPFRCTLALRLAGCLSC*PQPLFH Trigger: ATGGAAGAGAGGTTGAGGTCAGCACGAGAGACAGCC...GGCCAGACGAAGTGCTAGAGTGCATCGAAAGGGGAGTGGACTTGTTTGAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAGATGGGCCAAGAAATCTaGAGAAGGCCTTCCTCCACA | + |
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Preference number: 2 (lower is better) Translates to: TCDACPCLLTRGRTQKSQMGQEI*RRPSST Trigger: TGTGGAGGAAGGCCTTCTGCAGATTTCTTGGCCCAT...CTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCCTCCACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACATCAGGGTCAGAAGAATaGCAATTCACCAACCACTTC | + |
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Preference number: 2 (lower is better) Translates to: FCLHLRCLSLFTHEGTDTSGSEE*QFTNHF Trigger: GAAGTGGTTGGTGAATTGGCATTCTTCTGACCCTGA...TGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGTGGAGGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACTCCAATGATCACACTTTTCTGGAGGACCTCAGACTCCTCCTGTAGTCGCTGGGCCGGGGGTGACTaGATCGTGCAGGGAACAATA | + |
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Preference number: 2 (lower is better) Translates to: ITPMITLFWRTSDSSCSRWAGGD*IVQGTI Trigger: TATTGTTCCCTGCACGATCCAGTCACCCCCGGCCCA...GCGACTACAGGAGGAGTCTGAGGTCCTCCAGAAAAGTGTGATCATTGGAGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCCTCCACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACATCCTCAGGATTCAGCTaGCAATCAAAGGTGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: FCLHLRCLSLFTHEGTDTSSGFS*QSKVKV Trigger: GACTTTCACCTTTGATTGCCAGCTGAATCCTGAGGA...TGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGTGGAGGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR TCA 90 bp | TCACGAGGGGACGGACACAGAAAAGTCAGCATTTGCCTGAGCTTACAGCTGTGTATGGCCCAAAGCCCCTaGGAGCATGAGGAGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: SRGDGHRKVSICLSLQLCMAQSP*EHEEKQ Trigger: TTGTTTCTCCTCATGCTCTCAGGGGCTTTGGGCCAT...ACACAGCTGTAAGCTCAGGCAAATGCTGACTTTTCTGTGTCCGTCCCCTCGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGGAATAGCTGTGCTTCCAGCTATGACAGCCATCTCCACTCGGGCCTCACCCGAGAGCTCAGATCTCTaGCATTTCACTGTTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: QGIAVLPAMTAISTRASPESSDL*HFTVSE Trigger: TTCAGAAACAGTGAAATGGCAGAGATCTGAGCTCTC...GGGTGAGGCCCGAGTGGAGATGGCTGTCATAGCTGGAAGCACAGCTATTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR TCA 90 bp | CGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAGCATTTGGAATCTCCTCCAAGTaGCAGAGCCAGTCATTACAG | + |
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Preference number: 2 (lower is better) Translates to: RCLSLFTHEGTDTEKSAFGISSK*QSQSLQ Trigger: CTGTAATGACTGGCTCTGTCACTTGGAGGAGATTCC...AAATGCTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAACTCTGTCTCTGCGTCTGCATTCTATGAATCCCTTGCATTCATCAACAAGTCCTCCACACTCCTGTaGGCAGGGTGGGGCAGATGC | + |
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Preference number: 2 (lower is better) Translates to: RNSVSASAFYESLAFINKSSTLL*AGWGRC Trigger: GCATCTGCCCCACCCTGCCCACAGGAGTGTGGAGGA...CTTGTTGATGAATGCAAGGGATTCATAGAATGCAGACGCAGAGACAGAGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGTCATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACAACTGAAGACAAAGGTATaGCCCAAAGCCCCTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: ALSCHHKNTELQRTPEGQLKTKV*PKAPES Trigger: GCTCTCAGGGGCTTTGGGCCATACCTTTGTCTTCAG...TTGTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATGACAGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAACTTGGAAACAGTCATTTCCACTCGACCTCCAAAACCCCACACGGACACATGTTACATAACCAGCTaGGCCGGGGGTGACTGGATC | + |
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Preference number: 2 (lower is better) Translates to: MNLETVISTRPPKPHTDTCYITS*AGGDWI Trigger: GATCCAGTCACCCCCGGCCCAGCTGGTTATGTAACA...TGTGTCCGTGTGGGGTTTTGGAGGTCGAGTGGAAATGACTGTTTCCAAGTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR-3UTR CCA 90 bp | AACTCTCAAACAAGTCCACTCCCCTTTCGATGCACTCTAGCACTTCGTCTGGCCGGTCCACAGACTTCCTaGCCCGTTTTATGGAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: NSQTSPLPFRCTLALRLAGPQTS*PVLWKL Trigger: CAACTTCCATAAAACGGGCCAGGAAGTCTGTGGACC...GGCCAGACGAAGTGCTAGAGTGCATCGAAAGGGGAGTGGACTTGTTTGAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR CAA 90 bp | CCATGCCAATTCTCCCCTCTACATTCTGAAACCAGGGTAGCAGCCTaGATGGAGATTTCCCAGCTGGCCAAGAATAAGCAGGAAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: PCQFSPLHSETRVAA*MEISQLAKNKQEGH Trigger: ATGTCCTTCCTGCTTATTCTTGGCCAGCTGGGAAATCTCCATCAAGGCTGCTACCCTGGTTTCAGAATGTAGAGGGGAGAATTGGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCATTCAACACAGATCACTGAGAACAGAAACTCTGTCTCTGCGTCTGCATTCCTGTGCTTCCAGCTATaGCAGCCATCTCCACTCGGG | + |
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Preference number: 2 (lower is better) Translates to: IHSTQITENRNSVSASAFLCFQL*QPSPLG Trigger: CCCGAGTGGAGATGGCTGTCATAGCTGGAAGCACAG...GAATGCAGACGCAGAGACAGAGTTTCTGTTCTCAGTGATCTGTGTTGAATGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR TCA 90 bp | ATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGCACCCTCTTACAAGCGGAAGTCAGCATTTGCCTaGGCTTACAGCTGTGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: IRTSVVLTAVTGAPSYKRKSAFA*AYSCVE Trigger: TTCCACACAGCTGTAAGCTCAGGCAAATGCTGACTT...CCGCTTGTAAGAGGGTGCTCCTGTTACTGCTGTAAGAACCACACTCGTGCGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR TCA 90 bp | CATCAGAAGATGGTGGATATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGGCTGCAGGGCCTCCTaGATTGCCATGAACTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: HQKMVDIRTSVVLTAVTGGCRAS*IAMNLE Trigger: TTCCAAGTTCATGGCAATTCAGGAGGCCCTGCAGCC...TCCTGTTACTGCTGTAAGAACCACACTCGTGCGTATATCCACCATCTTCTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146343.8 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCCGGAGGGACAACCAGCCTCAGGGTCAGAAGAATGCCAATTCACCAACGAGAGCTCAGATCTCTaGCATTTCACTGTTTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RTPEGQPASGSEECQFTNESSDL*HFTVSE Trigger: TTCAGAAACAGTGAAATGGCAGAGATCTGAGCTCTC...GTTGGTGAATTGGCATTCTTCTGACCCTGAGGCTGGTTGTCCCTCCGGGGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR GCA 90 bp | GGATCTGCACAACCAGACAGAGCAGCTAGGCAATATTTGGTTCCTCATGGGCAAATGGGCCAAGAAATCTaGAGAAGGCCTTCCTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: GSAQPDRAARQYLVPHGQMGQEI*RRPSST Trigger: TGTGGAGGAAGGCCTTCTGCAGATTTCTTGGCCCAT...TTGCCCATGAGGAACCAAATATTGCCTAGCTGCTCTGTCTGGTTGTGCAGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAATATTTGGTTCCTCATaGGCAAGTACAGTGGTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: HLRCLSLFTHEGTDTEKSIFGSS*ASTVVV Trigger: GACAACCACTGTACTTGCCCATGAGGAACCAAATAT...TGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAGCATTTGTACAGCTGTGTGGAATaGAAACCGATCTGCTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: DACPCLLTRGRTQKSQHLYSCVE*KPICCQ Trigger: CTGACAGCAGATCGGTTTCCATTCCACACAGCTGTA...CAAATGCTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTCTCAAACAAGTCCACTCCCCTTTCGATGCACTCTAGCACTTCGTCTGGCCAAGCCCCTGAGAGCATaGGGAGAAACAAATAAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: NSQTSPLPFRCTLALRLAKPLRA*GETNKS Trigger: GCTTTTATTTGTTTCTCCTCATGCTCTCAGGGGCTT...GGCCAGACGAAGTGCTAGAGTGCATCGAAAGGGGAGTGGACTTGTTTGAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCCTGTCATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACAAGTCAGCATTTGCCTaGGCTTACAGCTGTGTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KPCHATTKIQNYREPRRDKSAFA*AYSCVE Trigger: TTCCACACAGCTGTAAGCTCAGGCAAATGCTGACTT...GTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATGACAGGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGCTGGCAATCAAAGGTGAAAGTCAGGGCACAGCCCCGCTCGGTCACTTGATCTGCCCTCAGTTATaGGGATCAAATAAAGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: IQLAIKGESQGTAPLGHLICPQL*GSNKGI Trigger: GATTCCTTTATTTGATCCTCATAACTGAGGGCAGAT...CAAGTGACCGAGCGGGGCTGTGCCCTGACTTTCACCTTTGATTGCCAGCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTCTCAAACAAGTCCACTCCCCTTTCGATGCACTCTAGCACTTCGTCTGGCCGGCACCAGGTTATCATaGGTAAAAAGCAGCATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: NSQTSPLPFRCTLALRLAGTRLS*VKSSIC Trigger: ACAGATGCTGCTTTTTACTCATGATAACCTGGTGCC...GGCCAGACGAAGTGCTAGAGTGCATCGAAAGGGGAGTGGACTTGTTTGAGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGGTGGATATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGCACCCCAGGGCCTCCTGAATTaGCATGAACTTGGAAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: KMVDIRTSVVLTAVTGAPQGLLN*HELGNS Trigger: ACTGTTTCCAAGTTCATGGCAATTCAGGAGGCCCTG...GGGTGCTCCTGTTACTGCTGTAAGAACCACACTCGTGCGTATATCCACCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146343.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGACAACCAGCCTCAGGGTCAGAAGAATGCCAATTCACCAACCACTTCAAAATCGGATCACAAAAGCATaGCCTGAGCCCCATATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GTTSLRVRRMPIHQPLQNRITKA*PEPHIP Trigger: AGGAATATGGGGCTCAGGCCATGCTTTTGTGATCCG...ATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGACCCTGAGGCTGGTTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR TCA 90 bp | GGATCTGCACAACCAGACAGAGCAGCTAGGCAATATTTGGTTCCTCATGGGCAAAAGCCCCTGAGAGCATaGGGAGAAACAAATAAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GSAQPDRAARQYLVPHGQKPLRA*GETNKS Trigger: GCTTTTATTTGTTTCTCCTCATGCTCTCAGGGGCTT...TTGCCCATGAGGAACCAAATATTGCCTAGCTGCTCTGTCTGGTTGTGCAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCAGAAGATGGTGGATATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGGAATCTCCTCCAAGTaGCAGAGCCAGTCATTACAG | + |
|
Preference number: 2 (lower is better) Translates to: HQKMVDIRTSVVLTAVTGGISSK*QSQSLQ Trigger: CTGTAATGACTGGCTCTGTCACTTGGAGGAGATTCC...TCCTGTTACTGCTGTAAGAACCACACTCGTGCGTATATCCACCATCTTCTGATG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTGGCCCGTTTTATGGAAGTTGTTTCTGCACAAGATGCTTCCCCATCCGAGTCTGCCAAGACTTCATaGTGTTCTGCTATACAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: FLARFMEVVSAQDASPSESAKTS*CSAIQV Trigger: GACCTGTATAGCAGAACATCATGAAGTCTTGGCAGA...CTCGGATGGGGAAGCATCTTGTGCAGAAACAACTTCCATAAAACGGGCCAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131360.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGAACTTGGAAACAGTCATTTCCACTCGACCTCCAAAACCCCACACGGACACATCTGCCAAGACTTCATaGTGTTCTGCTCTGGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: MNLETVISTRPPKPHTDTSAKTS*CSALEA Trigger: AGCTTCCAGAGCAGAACATCATGAAGTCTTGGCAGA...TGTGTCCGTGTGGGGTTTTGGAGGTCGAGTGGAAATGACTGTTTCCAAGTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146343.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCCATTCAACACAGATCACTGAGAACAGAAACTCTGTCTCTGCGTCTGCATTCCATTCTGCCTCCACCTaGGATGCCTGTCCCTGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: IHSTQITENRNSVSASAFHSAST*DACPCL Trigger: TAAACAGGGACAGGCATCGCAGGTGGAGGCAGAATG...GAATGCAGACGCAGAGACAGAGTTTCTGTTCTCAGTGATCTGTGTTGAATGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCCACAGACTTCCTGGCCCGTTTTATGGAAGTTGTTTCTGCACAAGATGCTTCCAGGGCCTCCTGAATTaGCATGAACTTGGAAACAGT | + |
|
Preference number: 2 (lower is better) Translates to: VHRLPGPFYGSCFCTRCFQGLLN*HELGNS Trigger: ACTGTTTCCAAGTTCATGGCAATTCAGGAGGCCCTG...GAAGCATCTTGTGCAGAAACAACTTCCATAAAACGGGCCAGGAAGTCTGTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR-3UTR GCA 90 bp | CATCAGAAGATGGTGGATATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGATCACGAGCAATGGTaGACACCTGTAATCCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: HQKMVDIRTSVVLTAVTGDHEQW*TPVIPA Trigger: AGCTGGGATTACAGGTGTGCACCATTGCTCGTGATC...TCCTGTTACTGCTGTAAGAACCACACTCGTGCGTATATCCACCATCTTCTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCATTCAACACAGATCACTGAGAACAGAAACTCTGTCTCTGCGTCTGCATTCCATGGGCAAGTACAGTaGTTGTCAGAAGACCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: IHSTQITENRNSVSASAFHGQVQ*LSEDPG Trigger: GCCTGGGTCTTCTGACAACCACTGTACTTGCCCATG...GAATGCAGACGCAGAGACAGAGTTTCTGTTCTCAGTGATCTGTGTTGAATGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCCTGTCATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACCAGCTAGGCAATATTTaGTTCCTCATGGGCAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: KPCHATTKIQNYREPRRDQLGNI*FLMGKY Trigger: GTACTTGCCCATGAGGAACCAAATATTGCCTAGCTG...GTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATGACAGGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAGATGGTGGATATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGCATGGAGATTTCCCAGCTaGCCAAGAATAAGCAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QKMVDIRTSVVLTAVTGAWRFPS*PRISRK Trigger: CTTCCTGCTTATTCTTGGCCAGCTGGGAAATCTCCA...TGCTCCTGTTACTGCTGTAAGAACCACACTCGTGCGTATATCCACCATCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCAATCAAAGGTGAAAGTCAGGGCACAGCCCCGCTCGGTCACTTGATATGGTCCTTTCTTATATTCTaGCAAGACTTCATGATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LAIKGESQGTAPLGHLIWSFLIF*QDFMMF Trigger: GAACATCATGAAGTCTTGGCAGAATATAAGAAAGGA...CCATATCAAGTGACCGAGCGGGGCTGTGCCCTGACTTTCACCTTTGATTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| 3UTR-3UTR GCA 90 bp | ACACCAGCCAGCAGCTCGTTGGTCATCAGAAGATGGTGGATATACGCACGAGTGTTGGTTGCAACCAGTTaGTTCAATTTTCTTTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: TPASSSLVIRRWWIYARVLVATS*FNFLCL Trigger: CAAGCAAAGAAAATTGAAGCAACTGGTTGCAACCAA...CACTCGTGCGTATATCCACCATCTTCTGATGACCAACGAGCTGCTGGCTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146343.8 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | TATATTTTCCAGTTCTCAAAACATCTGTCTGCAAATGAGTTCTTTCAGCTGTGCCTCCTGTGGGCAGGGTaGGGCAGATGCTCTTTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: YIFQFSKHLSANEFFQLCLLWAG*GRCSLV Trigger: GACCAAAGAGCATCTGCCCCACCCTGCCCACAGGAG...GCACAGCTGAAAGAACTCATTTGCAGACAGATGTTTTGAGAACTGGAAAATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR GCA 90 bp | CAACCACTTCAAAATCCACAGGACAATCTTATGGCTGGATACAAACAAAACAGACATTCTGCCTCCACCTaGGATGCCTGTCCCTGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: QPLQNPQDNLMAGYKQNRHSAST*DACPCL Trigger: TAAACAGGGACAGGCATCGCAGGTGGAGGCAGAATG...TCTGTTTTGTTTGTATCCAGCCATAAGATTGTCCTGTGGATTTTGAAGTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR GCA 90 bp | GGATATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGCACCCTCTTACAATGGATTCCATTTTGTTaGAATAGTGTCTCCTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GYTHECGSYSSNRSTLLQWIPFC*NSVSSG Trigger: TCCTGAGGAGACACTATTGCAACAAAATGGAATCCA...TTGTAAGAGGGTGCTCCTGTTACTGCTGTAAGAACCACACTCGTGCGTATATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146343.8 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAACTCTGTCTCTGCGTCTGCATTCTATGAATCCCTTGCATTCATCAACAAGTACAGCTGTGTGGAATaGAAACCGATCTGCTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RNSVSASAFYESLAFINKYSCVE*KPICCQ Trigger: CTGACAGCAGATCGGTTTCCATTCCACACAGCTGTA...CTTGTTGATGAATGCAAGGGATTCATAGAATGCAGACGCAGAGACAGAGTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCTCAATCACTCCAATGATCACACTTTTCTGGAGGACCTCAGACTCCTCCTGTCCTTTCTTATATTCTaGCAAGACTTCATGATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: TLNHSNDHTFLEDLRLLLSFLIF*QDFMMF Trigger: GAACATCATGAAGTCTTGGCAGAATATAAGAAAGGA...CAGGAGGAGTCTGAGGTCCTCCAGAAAAGTGTGATCATTGGAGTGATTGAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
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| 3UTR-3UTR CCA 90 bp | GGACAACCAGCCTCAGGGTCAGAAGAATGCCAATTCACCAACCACTTCAAAATCACAAATAAAAGCCTGTaGAATCAGCTAGATGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: GQPASGSEECQFTNHFKITNKSL*NQLDDF Trigger: GAAGTCATCTAGCTGATTCCACAGGCTTTTATTTGT...GATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGACCCTGAGGCTGGTTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | TATATTTTCCAGTTCTCAAAACATCTGTCTGCAAATGAGTTCTTTCAGCTGTGCCATGGGCAAGTACAGTaGTTGTCAGAAGACCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: YIFQFSKHLSANEFFQLCHGQVQ*LSEDPG Trigger: GCCTGGGTCTTCTGACAACCACTGTACTTGCCCATG...GCACAGCTGAAAGAACTCATTTGCAGACAGATGTTTTGAGAACTGGAAAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAGAAGAATGCCAATTCACCAACCACTTCAAAATCCACAGGACAATCTTATGGAGCTTACAGCTGTGTaGAATGGAAACCGATCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VRRMPIHQPLQNPQDNLMELTAV*NGNRSA Trigger: AGCAGATCGGTTTCCATTCCACACAGCTGTAAGCTC...CATAAGATTGTCCTGTGGATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | GGGACAACCAGCCTCAGGGTCAGAAGAATGCCAATTCACCAACCACTTCAAAATGGACAATCTTATGGCTaGATACAAACAAAACAGACA | + |
|
Preference number: 2 (lower is better) Translates to: GTTSLRVRRMPIHQPLQNGQSYG*IQTKQT Trigger: TGTCTGTTTTGTTTGTATCCAGCCATAAGATTGTCC...ATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGACCCTGAGGCTGGTTGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR CAA 90 bp | TTTGGAGGCAGAGGCTGGAGGATCCATAGCAAGTTTGAGGCCAGCTaGGAATACACAAGACTCCACAGAAGTATATATACATTAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FGGRGWRIHSKFEAS*EYTRLHRSIYTLRK Trigger: TTTTCTTAATGTATATATACTTCTGTGGAGTCTTGTGTATTCCAAGCTGGCCTCAAACTTGCTATGGATCCTCCAGCCTCTGCCTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTCTCAAAACATCTGTCTGCAAATGAGTTCTTTCAGCTGTGCCAGTGTGTCCAGATTAATTTCAAATaGCGTCATCTCTTGGTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QFSKHLSANEFFQLCQCVQINFK*RHLLVA Trigger: TGCAACCAAGAGATGACGTCATTTGAAATTAATCTG...GACACACTGGCACAGCTGAAAGAACTCATTTGCAGACAGATGTTTTGAGAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146343.8 ENSMUST00000156568.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCGGATGGAGCAGAAAAATCCAAAGTAGTGCTCAAAGTTGTGCATCATAAGAGAAAAGTCAGCATTTaGCTGAGCTTACAGCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: FSDGAEKSKVVLKVVHHKRKVSI*LSLQLC Trigger: ACACAGCTGTAAGCTCAGGCAAATGCTGACTTTTCT...CTTATGATGCACAACTTTGAGCACTACTTTGGATTTTTCTGCTCCATCCGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGAATGCCAATTCACCAACCACTTCAAAATCCACAGGACAATCTTATGGCTATATTTGGTTCCTCATaGGCAAGTACAGTGGTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RRMPIHQPLQNPQDNLMAIFGSS*ASTVVV Trigger: GACAACCACTGTACTTGCCCATGAGGAACCAAATAT...AGCCATAAGATTGTCCTGTGGATTTTGAAGTGGTTGGTGAATTGGCATTCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR TCA 90 bp | CAACCACTTCAAAATCCACAGGACAATCTTATGGCTGGATACAAACAAAACAGACAAAAGCAGACTTGCTaGAGGTTCTTACTTACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QPLQNPQDNLMAGYKQNRQKQTC*RFLLTE Trigger: CTCTGTAAGTAAGAACCTTCAGCAAGTCTGCTTTTG...TCTGTTTTGTTTGTATCCAGCCATAAGATTGTCCTGTGGATTTTGAAGTGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR CCA 90 bp | TATATTTTCCAGTTCTCAAAACATCTGTCTGCAAATGAGTTCTTTCAGCTGTGCCAGCTAGGCAATATTTaGTTCCTCATGGGCAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: YIFQFSKHLSANEFFQLCQLGNI*FLMGKY Trigger: GTACTTGCCCATGAGGAACCAAATATTGCCTAGCTG...GCACAGCTGAAAGAACTCATTTGCAGACAGATGTTTTGAGAACTGGAAAATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR TCA 90 bp | TATATTTTCCAGTTCTCAAAACATCTGTCTGCAAATGAGTTCTTTCAGCTGTGCCCTCCTGAATTGCCATaGACTTGGAAACAGTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: YIFQFSKHLSANEFFQLCPPELP*TWKQSF Trigger: AAATGACTGTTTCCAAGTTCATGGCAATTCAGGAGG...GCACAGCTGAAAGAACTCATTTGCAGACAGATGTTTTGAGAACTGGAAAATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146343.8 |
||
| 3UTR-3UTR GCA 90 bp | TATATTTTCCAGTTCTCAAAACATCTGTCTGCAAATGAGTTCTTTCAGCTGTGCTTGGTTGCACTAGAATaGAACATGACTTTACTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: YIFQFSKHLSANEFFQLCLVALE*NMTLLL Trigger: CAAGAGTAAAGTCATGTTGCATTCTAGTGCAACCAA...GCACAGCTGAAAGAACTCATTTGCAGACAGATGTTTTGAGAACTGGAAAATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR CCA 72 bp | GAAAGCCGTCCAGCAGGAAGCCCCCGACGGGTCGCTTaGCTGTCTCTCGTGCTGACCTCAACCTCTCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ESRPAGSPRRVA*LSLVLTSTSLP Trigger: TGGAAGAGAGGTTGAGGTCAGCACGAGAGACAGCCAAGCGACCCGTCGGGGGCTTCCTGCTGGACGGCTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| 3UTR TCA 72 bp | GAAGCCCCCGACGGGTCGCTTGGCTGTCTCTCGTGCTaGCCTCAACCTCTCTTCCATCACATCTCCACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: EAPDGSLGCLSC*PQPLFHHISTL Trigger: GAGGGTGGAGATGTGATGGAAGAGAGGTTGAGGTCAGCACGAGAGACAGCCAAGCGACCCGTCGGGGGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| 3UTR GCA 72 bp | GAGTATGACGCAGCTTCTGAACATTCTGCCTCCACCTaGGATGCCTGTCCCTGTTTACTCACGAGGGGACGG | + |
|
Preference number: 3 (lower is better) Translates to: EYDAASEHSAST*DACPCLLTRGR Trigger: CCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGTGGAGGCAGAATGTTCAGAAGCTGCGTCATACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR GCA 72 bp | TTCCTGTGCCTGGCTTGCCTAGCACACACAAAGCTGTaGGCTCCATTCCCAGGACTGTGCAGATCACGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FLCLACLAHTKL*APFPGLCRSRA Trigger: TGCTCGTGATCTGCACAGTCCTGGGAATGGAGCGCACAGCTTTGTGTGTGCTAGGCAAGCCAGGCACAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR GCA 72 bp | GCACACACAAAGCTGTGCGCTCCATTCCCAGGACTGTaGAGATCACGAGCAATGGTGCACACCTGTAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: AHTKLCAPFPGL*RSRAMVHTCNP Trigger: GGGATTACAGGTGTGCACCATTGCTCGTGATCTGCACAGTCCTGGGAATGGAGCGCACAGCTTTGTGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR CCA 72 bp | CCACACGGACACAGACTTACTTGTTACATAACCAGCTaGGCCGGGGGTGACTGGATCGTGCAGGGAACAATA | + |
|
Preference number: 3 (lower is better) Translates to: PHGHRLTCYITS*AGGDWIVQGTI Trigger: TATTGTTCCCTGCACGATCCAGTCACCCCCGGCCCAGCTGGTTATGTAACAAGTAAGTCTGTGTCCGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTCTCAAACAAGTCCACTCCCCTTTCGATGCACTCTAGCACTTCGTCTGGCCCAGATGAGCCTTGGTTaGTCCTCTGGCAGCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NSQTSPLPFRCTLALRLAQMSLG*SSGSSA Trigger: TGCAGAGCTGCCAGAGGACAAACCAAGGCTCATCTG...GGCCAGACGAAGTGCTAGAGTGCATCGAAAGGGGAGTGGACTTGTTTGAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| 3UTR TCA 72 bp | CACGAGGGGACGGACACAGAAAAGTCAGCATTTGCCTaGGCTTACAGCTGTGTGGAATGGAAACCGATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HEGTDTEKSAFA*AYSCVEWKPIC Trigger: GCAGATCGGTTTCCATTCCACACAGCTGTAAGCTCAGGCAAATGCTGACTTTTCTGTGTCCGTCCCCTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR GCA 72 bp | AAAGTCACAGTTCTGATCGATATGGGCCAAGAAATCTaGAGAAGGCCTTCCTCCACACTCCTGTGGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KVTVLIDMGQEI*RRPSSTLLWAG Trigger: CCCTGCCCACAGGAGTGTGGAGGAAGGCCTTCTGCAGATTTCTTGGCCCATATCGATCAGAACTGTGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR GCA 72 bp | CACCCCGCATACCCACATGCCTTGGTTGCACTAGAATaGAACATGACTTTACTCTTGTCTCCAGGCACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HPAYPHALVALE*NMTLLLSPGTR Trigger: CCTGGTGCCTGGAGACAAGAGTAAAGTCATGTTGCATTCTAGTGCAACCAAGGCATGTGGGTATGCGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR CCA 72 bp | TGTGGAATGGAAACCGATCTGCTGTCAGGCCAGGATTaGGGCCACATCAACACACAGCAAAGGAATCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CGMETDLLSGQD*GHINTQQRNLL Trigger: GAGGAGATTCCTTTGCTGTGTGTTGATGTGGCCCCAATCCTGGCCTGACAGCAGATCGGTTTCCATTCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR CCA 72 bp | AGGACACCAGCCAGCAGCTCGTTGGTCATCAGAAGATaGTGGATATACGCACGAGTGTGGTTCTTACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RTPASSSLVIRR*WIYARVWFLQQ Trigger: CTGCTGTAAGAACCACACTCGTGCGTATATCCACCATCTTCTGATGACCAACGAGCTGCTGGCTGGTGTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146343.8 ENSMUST00000156568.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACAACCAGCCTACCAGGGTAGCAGCCTaGATGGAGATTTCCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HATTKIQNYREPRRDNQPTRVAA*MEISQL Trigger: CAGCTGGGAAATCTCCATCAAGGCTGCTACCCTGGT...AGGCTGGTTGTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR TCA 72 bp | GGAACCAATCTGGCTGCAGGGCCTCCTGAATTGCCATaGACTTGGAAACAGTCATTTCCACTCGACCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GTNLAAGPPELP*TWKQSFPLDLQ Trigger: TTGGAGGTCGAGTGGAAATGACTGTTTCCAAGTTCATGGCAATTCAGGAGGCCCTGCAGCCAGATTGGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| 3UTR GCA 72 bp | AATCTAATTATGCACATGAAGACGCAGAAACCCTCCTaGGCGCTGCAGCCAAGGCTGGATACCTGGAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NLIMHMKTQKPS*ALQPRLDTWKL Trigger: AAGCTTCCAGGTATCCAGCCTTGGCTGCAGCGCGCAGGAGGGTTTCTGCGTCTTCATGTGCATAATTAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131360.8 |
||
| 3UTR CCA 72 bp | TGTCCAGGAACAGAAGCGAGCGGTCCACAGACTTCCTaGCCCGTTTTATGGAAGTTGTTTCTGCACAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: CPGTEASGPQTS*PVLWKLFLHKM Trigger: CATCTTGTGCAGAAACAACTTCCATAAAACGGGCCAGGAAGTCTGTGGACCGCTCGCTTCTGTTCCTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGATGGTGGATATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGCATTTCCTGTGCCTGGCTaGCCTAGCACACACAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QKMVDIRTSVVLTAVTGAFPVPG*PSTHKA Trigger: AGCTTTGTGTGTGCTAGGCAAGCCAGGCACAGGAAA...TGCTCCTGTTACTGCTGTAAGAACCACACTCGTGCGTATATCCACCATCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR TCA 72 bp | GGGGGTGACTGGATCGTGCAGGGAACAATAGAAGAGTaGTTCCGGCATGCCTATAAAGCTTCCAACTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GGDWIVQGTIEE*FRHAYKASNSF Trigger: AAAGGAGTTGGAAGCTTTATAGGCATGCCGGAATCACTCTTCTATTGTTCCCTGCACGATCCAGTCACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| 3UTR CCA 72 bp | CAGAAAAGTCAGCATTTGCCTGAGCTTACAGCTGTGTaGAATGGAAACCGATCTGCTGTCAGGCCAGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: QKSQHLPELTAV*NGNRSAVRPGL Trigger: CAATCCTGGCCTGACAGCAGATCGGTTTCCATTCCACACAGCTGTAAGCTCAGGCAAATGCTGACTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR CCA 72 bp | TCTCCACCCTCAATCACTCCAATGATCACACTTTTCTaGAGGACCTCAGACTCCTCCTGTAGTCGCAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SPPSITPMITLF*RTSDSSCSRKQ Trigger: CTGTTTGCGACTACAGGAGGAGTCTGAGGTCCTCCAGAAAAGTGTGATCATTGGAGTGATTGAGGGTGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| 3UTR-3UTR CAA 90 bp | CGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAGCATTTGACGTCATCTCTTGGTaGCAACCAGTTGCTTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: RCLSLFTHEGTDTEKSAFDVISW*QPVASI Trigger: AATTGAAGCAACTGGTTGCAACCAAGAGATGACGTC...AAATGCTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGTGGTAGTTGTTGTGGTAGCCCTGAAGACAAAGGTATGGCCCAAAGCCCCAACATGACTTTACTCTaGTCTCCAGGCACCAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSGSCCGSPEDKGMAQSPNMTLL*SPGTRL Trigger: TAACCTGGTGCCTGGAGACAAGAGTAAAGTCATGTT...GGGGCTTTGGGCCATACCTTTGTCTTCAGGGCTACCACAACAACTACCACTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR CAA 90 bp | ATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGCACCCTCTTACAAGCGGGCCACAAAAGCAGACTaGCTGAAGGTTCTTACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: IRTSVVLTAVTGAPSYKRATKAD*LKVLTY Trigger: GTAAGTAAGAACCTTCAGCAAGTCTGCTTTTGTGGC...CCGCTTGTAAGAGGGTGCTCCTGTTACTGCTGTAAGAACCACACTCGTGCGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACAACCAGCCTGGATCCATAGCAAGTTaGAGGCCAGCTTGGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: HATTKIQNYREPRRDNQPGSIAS*RPAWNT Trigger: TGTATTCCAAGCTGGCCTCAAACTTGCTATGGATCC...AGGCTGGTTGTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR GCA 72 bp | TTTGGTCCCACCGTAACCGCTGAGAGCTCAGATCTCTaGCATTTCACTGTTTCTGAAGATGAGACAGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: FGPTVTAESSDL*HFTVSEDETGL Trigger: TAAGCCTGTCTCATCTTCAGAAACAGTGAAATGGCAGAGATCTGAGCTCTCAGCGGTTACGGTGGGACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR GCA 72 bp | AGCATATCCTCACCCCGCATACCCACATGCCTTGGTTaGACTAGAATGCAACATGACTTTACTCTTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SISSPRIPTCLG*TRMQHDFTLVS Trigger: GGAGACAAGAGTAAAGTCATGTTGCATTCTAGTGCAACCAAGGCATGTGGGTATGCGGGGTGAGGATATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR CCA 72 bp | GATCTGCACAACCAGACAGAGCAGCTAGGCAATATTTaGTTCCTCATGGGCAAGTACAGTGGTTGTCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DLHNQTEQLGNI*FLMGKYSGCQK Trigger: CTTCTGACAACCACTGTACTTGCCCATGAGGAACCAAATATTGCCTAGCTGCTCTGTCTGGTTGTGCAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACAACCAGCCTCAGGGTCAGAAGAATGCCAATTCACCAACCACTTCAAAATCCAGAAAAGTCAGCATTaGCCTGAGCTTACAGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GQPASGSEECQFTNHFKIQKSQH*PELTAV Trigger: CACAGCTGTAAGCTCAGGCAAATGCTGACTTTTCTG...GATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGACCCTGAGGCTGGTTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR TCA 72 bp | CTTCCAACTCCTTTCTTATATTCTGCCAAGACTTCATaGTGTTCTGCTATACAGGTCTCGCTGGGATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPTPFLYSAKTS*CSAIQVSLGSR Trigger: CCTGGATCCCAGCGAGACCTGTATAGCAGAACATCATGAAGTCTTGGCAGAATATAAGAAAGGAGTTGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131360.8 |
||
| 3UTR TCA 72 bp | ATAAAGGAATCCATGCCAATTCTCCCCTCTACATTCTaGAACCAGGGTAGCAGCCTTGATGGAGATTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: IKESMPILPSTF*NQGSSLDGDFP Trigger: TGGGAAATCTCCATCAAGGCTGCTACCCTGGTTTCAGAATGTAGAGGGGAGAATTGGCATGGATTCCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR CCA 72 bp | GCTAGGCAATATTTGGTTCCTCATGGGCAAGTACAGTaGTTGTCAGAAGACCCAGGCACAAAAAGACTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ARQYLVPHGQVQ*LSEDPGTKRLV Trigger: TACAAGTCTTTTTGTGCCTGGGTCTTCTGACAACCACTGTACTTGCCCATGAGGAACCAAATATTGCCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR TCA 72 bp | AATGAGAGAACAGAGGGTAACATCTGCCCTCAGTTATaGGGATCAAATAAAGGAATCCATGCCAATTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: NERTEGNICPQL*GSNKGIHANSP Trigger: GGGAGAATTGGCATGGATTCCTTTATTTGATCCTCATAACTGAGGGCAGATGTTACCCTCTGTTCTCTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR TCA 72 bp | ATGACTTTACTCTTGTCTCCAGGCACCAGGTTATCATaGGTAAAAAGCAGCATCTGTATTTGGCTCAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: MTLLLSPGTRLS*VKSSICIWLKN Trigger: ATTCTTGAGCCAAATACAGATGCTGCTTTTTACTCATGATAACCTGGTGCCTGGAGACAAGAGTAAAGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR GCA 72 bp | CATGCCTATAAAGCTTCCAACTCCTTTCTTATATTCTaGCAAGACTTCATGATGTTCTGCTATACAGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HAYKASNSFLIF*QDFMMFCYTGL Trigger: GAGACCTGTATAGCAGAACATCATGAAGTCTTGGCAGAATATAAGAAAGGAGTTGGAAGCTTTATAGGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131360.8 |
||
| 3UTR GCA 72 bp | CATGCCTATAAAGCTTCCAACTCCTTTCTTATATTCTaGCAAGACTTCATGATGTTCTGCTCTGGAAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HAYKASNSFLIF*QDFMMFCSGSL Trigger: TAAGCTTCCAGAGCAGAACATCATGAAGTCTTGGCAGAATATAAGAAAGGAGTTGGAAGCTTTATAGGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146343.8 |
||
| 3UTR TCA 72 bp | TATAAACAAGTACAAAATCCATTCAACACAGATCACTaGGAACAGAAACTCTGTCTCTGCGTCTGCATTCTA | + |
|
Preference number: 3 (lower is better) Translates to: YKQVQNPFNTDH*EQKLCLCVCIL Trigger: TAGAATGCAGACGCAGAGACAGAGTTTCTGTTCTCAGTGATCTGTGTTGAATGGATTTTGTACTTGTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR CAA 72 bp | CAAGTGCAGTCTGGTTTCTGTGACTGCTGGATCCCCTaGAAAGCCGTCCAGCAGGAAGCCCCCGACGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QVQSGFCDCWIP*KAVQQEAPDGS Trigger: CGACCCGTCGGGGGCTTCCTGCTGGACGGCTTTCAAGGGGATCCAGCAGTCACAGAAACCAGACTGCACTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTCCACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGTGGGCCGGGGGTGACTaGATCGTGCAGGGAACAATA | + |
|
Preference number: 4 (lower is better) Translates to: SASTCDACPCLLTRGRTQWAGGD*IVQGTI Trigger: TATTGTTCCCTGCACGATCCAGTCACCCCCGGCCCA...CTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGTGGAGGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR CAA 72 bp | TCGTCTGGCCGGCTGACACCGCAGATGAGCCTTGGTTaGTCCTCTGGCAGCTCTGCAGTGACTGATGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGRLTPQMSLG*SSGSSAVTDDS Trigger: GCTGTCATCAGTCACTGCAGAGCTGCCAGAGGACAAACCAAGGCTCATCTGCGGTGTCAGCCGGCCAGACGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCAGACTCCTCCTGTAGTCGCAAACAGCTGTCCAGGAACAGAAGCGAGCGGGGGCAGAGCCAGTCCTaGTGTAGAGAAGACAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TSDSSCSRKQLSRNRSERGQSQS*CREDSP Trigger: CGGGCTGTCTTCTCTACACCAGGACTGGCTCTGCCC...CCGCTCGCTTCTGTTCCTGGACAGCTGTTTGCGACTACAGGAGGAGTCTGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| CDS-3UTR CCA 90 bp | CGAGGGGACGGACACAGAAAAGTCAGCATTTGCCTGAGCTTACAGCTGTGTGGACCCCGACGGGTCGCTTaGCTGTCTCTCGTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: RGDGHRKVSICLSLQLCGPRRVA*LSLVLT Trigger: GGTCAGCACGAGAGACAGCCAAGCGACCCGTCGGGG...TCCACACAGCTGTAAGCTCAGGCAAATGCTGACTTTTCTGTGTCCGTCCCCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAGCTAGGGATGAGAGTGTaGGCTGGGCTATGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCDACPCLLTRGRTQKSQLGMRV*AGLCLG Trigger: TCCCAGGCATAGCCCAGCTCACACTCTCATCCCTAG...CTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGTGCAGTCTGGTTTCTGTGACTGCTGGATCCCCTTGAAAGCCGTCCAGACAGGGATGAGAGTGTaGGCTGGGCTATGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQVQSGFCDCWIPLKAVQTGMRV*AGLCLG Trigger: TCCCAGGCATAGCCCAGCTCACACTCTCATCCCTGT...CTGGACGGCTTTCAAGGGGATCCAGCAGTCACAGAAACCAGACTGCACTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| CDS-3UTR CCA 90 bp | GCGAGCGGTCCACAGACTTCCTGGCCCGTTTTATGGAAGTTGTTTCTGCACAAGGGGCAGAGCCAGTCCTaGTGTAGAGAAGACAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ASGPQTSWPVLWKLFLHKGQSQS*CREDSP Trigger: CGGGCTGTCTTCTCTACACCAGGACTGGCTCTGCCC...CTTGTGCAGAAACAACTTCCATAAAACGGGCCAGGAAGTCTGTGGACCGCTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGGCCAGGATTGGGGCCACATCAACACACAGCAAAGGAATCTCCTCCAAGATGAGAGTGTGAGCTaGGCTATGCCTGGGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSGQDWGHINTQQRNLLQDESVS*AMPGTP Trigger: CGGGGTCCCAGGCATAGCCCAGCTCACACTCTCATC...TTGGAGGAGATTCCTTTGCTGTGTGTTGATGTGGCCCCAATCCTGGCCTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTGGTTTCTGTGACTGCTGGATCCCCTTGAAAGCCGTCCAGCAGGAAGCCCACCGTGCAGTCCCCTaGTTTGCCCAGGTTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QSGFCDCWIPLKAVQQEAHRAVP*FAQVLY Trigger: ATACAAAACCTGGGCAAAGCAGGGGACTGCACGGTG...GGCTTCCTGCTGGACGGCTTTCAAGGGGATCCAGCAGTCACAGAAACCAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGAATAGCTGTGCTTCCAGCTATGACAGCCATCTCCACTCGGGCCTCACCCTCTGCCAAGACTTCATaGTGTTCTGCTAGGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGIAVLPAMTAISTRASPSAKTS*CSARDE Trigger: CTCATCCCTAGCAGAACATCATGAAGTCTTGGCAGA...GGGTGAGGCCCGAGTGGAGATGGCTGTCATAGCTGGAAGCACAGCTATTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCAGGCCAGGATTGGGGCCACATCAACACACAGCAAAGGAATCTCCTCCAAGGCTGTCTCTCGTGCTaGCCTCAACCTCTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSGQDWGHINTQQRNLLQGCLSC*PQPLFH Trigger: ATGGAAGAGAGGTTGAGGTCAGCACGAGAGACAGCC...TTGGAGGAGATTCCTTTGCTGTGTGTTGATGTGGCCCCAATCCTGGCCTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAAAGGAATCTCCTCCAAGTGACAGAGCCAGTCATTACAGACACAGCAGGGGGCAGAGCCAGTCCTaGTGTAGAGAAGACAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TAKESPPSDRASHYRHSRGQSQS*CREDSP Trigger: CGGGCTGTCTTCTCTACACCAGGACTGGCTCTGCCC...CCTGCTGTGTCTGTAATGACTGGCTCTGTCACTTGGAGGAGATTCCTTTGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR CCA 90 bp | CCTGTCATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACAACCGGGCAGAGCCAGTCCTaGTGTAGAGAAGACAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PVMPPQKYRITENPGGTTGQSQS*CREDSP Trigger: CGGGCTGTCTTCTCTACACCAGGACTGGCTCTGCCC...GGTTGTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATGACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR CCA 90 bp | ATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGCACCCTCTTACAAGCGGTGGGCCGGGGGTGACTaGATCGTGCAGGGAACAATA | + |
|
Preference number: 4 (lower is better) Translates to: IRTSVVLTAVTGAPSYKRWAGGD*IVQGTI Trigger: TATTGTTCCCTGCACGATCCAGTCACCCCCGGCCCA...CCGCTTGTAAGAGGGTGCTCCTGTTACTGCTGTAAGAACCACACTCGTGCGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR CAA 72 bp | AGCGGTCCACAGACTTCCTGGCCCGTTTTATGGAAGTaGTTTCTGCACAAGATGCTTCCCCATCCGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPQTSWPVLWK*FLHKMLPHPRG Trigger: GCCTCTCGGATGGGGAAGCATCTTGTGCAGAAACAACTTCCATAAAACGGGCCAGGAAGTCTGTGGACCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| CDS-3UTR GCA 90 bp | GCAATCAAAGGTGAAAGTCAGGGCACAGCCCCGCTCGGTCACTTGATATGGGAACACCGTGCAGTCCCCTaGTTTGCCCAGGTTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AIKGESQGTAPLGHLIWEHRAVP*FAQVLY Trigger: ATACAAAACCTGGGCAAAGCAGGGGACTGCACGGTG...TTCCCATATCAAGTGACCGAGCGGGGCTGTGCCCTGACTTTCACCTTTGATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 ENSMUST00000156568.8 |
||
| CDS-3UTR CCA 90 bp | ATCCATTCAACACAGATCACTGAGAACAGAAACTCTGTCTCTGCGTCTGCATTCCCCCGACGGGTCGCTTaGCTGTCTCTCGTGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: IHSTQITENRNSVSASAFPRRVA*LSLVLT Trigger: GGTCAGCACGAGAGACAGCCAAGCGACCCGTCGGGG...GAATGCAGACGCAGAGACAGAGTTTCTGTTCTCAGTGATCTGTGTTGAATGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR CAA 72 bp | GTGTGGAATGGAAACCGATCTGCTGTCAGGCCAGGATaGGGGCCACATCAACACACAGCAAAGGAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VWNGNRSAVRPG*GPHQHTAKESP Trigger: AGGAGATTCCTTTGCTGTGTGTTGATGTGGCCCCAATCCTGGCCTGACAGCAGATCGGTTTCCATTCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR TCA 90 bp | GGACAACCAGCCTCAGGGTCAGAAGAATGCCAATTCACCAACCACTTCAAAATCCTAGGGATGAGAGTGTaGGCTGGGCTATGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQPASGSEECQFTNHFKILGMRV*AGLCLG Trigger: TCCCAGGCATAGCCCAGCTCACACTCTCATCCCTAG...GATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGACCCTGAGGCTGGTTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAGTCTGCCAAGACTTCATaGTGTTCTGCTAGGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCDACPCLLTRGRTQKSQSAKTS*CSARDE Trigger: CTCATCCCTAGCAGAACATCATGAAGTCTTGGCAGA...CTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCTCGTTGGTCATCAGAAGATGGTGGATATACGCACGAGTGTGGTTCTTACGGCTGTCTCTCGTGCTaGCCTCAACCTCTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AARWSSEDGGYTHECGSYGCLSC*PQPLFH Trigger: ATGGAAGAGAGGTTGAGGTCAGCACGAGAGACAGCC...GTAAGAACCACACTCGTGCGTATATCCACCATCTTCTGATGACCAACGAGCTGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCCTGTCATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACGGCTGCAGGGCCTCCTaGATTGCCATGAACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPCHATTKIQNYREPRRDGCRAS*IAMNLE Trigger: TTCCAAGTTCATGGCAATTCAGGAGGCCCTGCAGCC...GTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATGACAGGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAAAGGAATCTCCTCCAAGTGACAGAGCCAGTCATTACAGACACAGCAGGTGTTACATAACCAGCTaGGCCGGGGGTGACTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TAKESPPSDRASHYRHSRCYITS*AGGDWI Trigger: GATCCAGTCACCCCCGGCCCAGCTGGTTATGTAACA...CCTGCTGTGTCTGTAATGACTGGCTCTGTCACTTGGAGGAGATTCCTTTGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR CCA 90 bp | GATCTGCACAACCAGACAGAGCAGCTAGGCAATATTTGGTTCCTCATGGGCAAGACCGCAGATGAGCCTTaGTTTGTCCTCTGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLHNQTEQLGNIWFLMGKTADEP*FVLWQL Trigger: GAGCTGCCAGAGGACAAACCAAGGCTCATCTGCGGT...CTTGCCCATGAGGAACCAAATATTGCCTAGCTGCTCTGTCTGGTTGTGCAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
||
| CDS-3UTR GCA 90 bp | CCTGTCATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACAACCCACCGTGCAGTCCCCTaGTTTGCCCAGGTTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PVMPPQKYRITENPGGTTHRAVP*FAQVLY Trigger: ATACAAAACCTGGGCAAAGCAGGGGACTGCACGGTG...GGTTGTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATGACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGGCCAGGATTGGGGCCACATCAACACACAGCAAAGGAATCTCCTCCAACAGGGCCTCCTGAATTaGCATGAACTTGGAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGQDWGHINTQQRNLLQQGLLN*HELGNS Trigger: ACTGTTTCCAAGTTCATGGCAATTCAGGAGGCCCTG...TTGGAGGAGATTCCTTTGCTGTGTGTTGATGTGGCCCCAATCCTGGCCTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCAGCATTTGCCTGAGCTTACAGCTGTGTGGAATGGAAACCGATCTGCTGTGTTACATAACCAGCTaGGCCGGGGGTGACTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KVSICLSLQLCGMETDLLCYITS*AGGDWI Trigger: GATCCAGTCACCCCCGGCCCAGCTGGTTATGTAACA...CAGCAGATCGGTTTCCATTCCACACAGCTGTAAGCTCAGGCAAATGCTGACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCCTGTCATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACGGTCCACAGACTTCCTaGCCCGTTTTATGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPCHATTKIQNYREPRRDGPQTS*PVLWKL Trigger: CAACTTCCATAAAACGGGCCAGGAAGTCTGTGGACC...GTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATGACAGGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR CAA 72 bp | TTACTCACGAGGGGACGGACACAGAAAAGTCAGCATTaGCCTGAGCTTACAGCTGTGTGGAATGGAAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLTRGRTQKSQH*PELTAVWNGNR Trigger: TCGGTTTCCATTCCACACAGCTGTAAGCTCAGGCAAATGCTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| 3UTR CAA 72 bp | TTCTCCCCTCTACATTCTGAAACCAGGGTAGCAGCCTaGATGGAGATTTCCCAGCTGGCCAAGAATAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSPLHSETRVAA*MEISQLAKNKQ Trigger: CTGCTTATTCTTGGCCAGCTGGGAAATCTCCATCAAGGCTGCTACCCTGGTTTCAGAATGTAGAGGGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| CDS-3UTR GCA 90 bp | CTGAATTGCCATGAACTTGGAAACAGTCATTTCCACTCGACCTCCAAAACCCCACACCGTGCAGTCCCCTaGTTTGCCCAGGTTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LNCHELGNSHFHSTSKTPHRAVP*FAQVLY Trigger: ATACAAAACCTGGGCAAAGCAGGGGACTGCACGGTG...TGGGGTTTTGGAGGTCGAGTGGAAATGACTGTTTCCAAGTTCATGGCAATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTCAGCATTTGCCTGAGCTTACAGCTGTGTGGAATGGAAACCGATCTGCTGTCTGGTTTCTGTGACTaGTGGATCCCCTTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVSICLSLQLCGMETDLLSGFCD*WIPLKA Trigger: GGCTTTCAAGGGGATCCAGCAGTCACAGAAACCAGA...CAGCAGATCGGTTTCCATTCCACACAGCTGTAAGCTCAGGCAAATGCTGACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCAAAGGAATCTCCTCCAAGTGACAGAGCCAGTCATTACAGACACAGCAGGCCTCAATCACTCCAATaGTCACACTTTTCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAKESPPSDRASHYRHSRPQSLQ*SHFSGG Trigger: TCCTCCAGAAAAGTGTGATCATTGGAGTGATTGAGG...CCTGCTGTGTCTGTAATGACTGGCTCTGTCACTTGGAGGAGATTCCTTTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR CCA 90 bp | CGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAGCATTTAATGACGTCATCTCTTaGTTGCAACCAGTTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCLSLFTHEGTDTEKSAFNDVIS*LQPVAS Trigger: TGAAGCAACTGGTTGCAACCAAGAGATGACGTCATT...AAATGCTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
||
| CDS-3UTR TCA 90 bp | CATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACAACCAGCCTCCTCCTGAATTGCCATaGACTTGGAAACAGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: HATTKIQNYREPRRDNQPPPELP*TWKQSF Trigger: AAATGACTGTTTCCAAGTTCATGGCAATTCAGGAGG...AGGCTGGTTGTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| CDS-3UTR GCA 90 bp | GATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGAAAAGTCAGCATTTGTGGATTCCATTTTGTTaGAATAGTGTCTCCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DACPCLLTRGRTQKSQHLWIPFC*NSVSSG Trigger: TCCTGAGGAGACACTATTGCAACAAAATGGAATCCA...CAAATGCTGACTTTTCTGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCATTTCACTGTTTCTGAAGATGAGACAGGCTTATATTTTCCAGTTCTCATCCAGCACTGGCCTTaGTTTGTCCTCTGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCHFTVSEDETGLYFPVLIQHWP*FVLWQL Trigger: GAGCTGCCAGAGGACAAACCAAGGCCAGTGCTGGAT...GAGAACTGGAAAATATAAGCCTGTCTCATCTTCAGAAACAGTGAAATGGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| 3UTR CAA 72 bp | AGGCAATATTTGGTTCCTCATGGGCAAGTACAGTGGTaGTCAGAAGACCCAGGCACAAAAAGACTTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQYLVPHGQVQW*SEDPGTKRLVA Trigger: GGCTACAAGTCTTTTTGTGCCTGGGTCTTCTGACAACCACTGTACTTGCCCATGAGGAACCAAATATTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| 3UTR CAA 72 bp | TACAGAGCATATCCTCACCCCGCATACCCACATGCCTaGGTTGCACTAGAATGCAACATGACTTTACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YRAYPHPAYPHA*VALECNMTLLL Trigger: CAAGAGTAAAGTCATGTTGCATTCTAGTGCAACCAAGGCATGTGGGTATGCGGGGTGAGGATATGCTCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| CDS-3UTR TCA 90 bp | TATATTTTCCAGTTCTCAAAACATCTGTCTGCAAATGAGTTCTTTCAGCTGTGCACAGGGATGAGAGTGTaGGCTGGGCTATGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YIFQFSKHLSANEFFQLCTGMRV*AGLCLG Trigger: TCCCAGGCATAGCCCAGCTCACACTCTCATCCCTGT...GCACAGCTGAAAGAACTCATTTGCAGACAGATGTTTTGAGAACTGGAAAATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146343.8 |
||
| CDS-3UTR GCA 90 bp | CGAGGGGACGGACACAGAAAAGTCAGCATTTGCCTGAGCTTACAGCTGTGTGGATCCTTTCTTATATTCTaGCAAGACTTCATGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGDGHRKVSICLSLQLCGSFLIF*QDFMMF Trigger: GAACATCATGAAGTCTTGGCAGAATATAAGAAAGGA...TCCACACAGCTGTAAGCTCAGGCAAATGCTGACTTTTCTGTGTCCGTCCCCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
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| CDS-3UTR GCA 90 bp | GAAACTCTGTCTCTGCGTCTGCATTCTATGAATCCCTTGCATTCATCAACAAGTTGTTTCTGCACAAGATaGTTCCCCATCCGAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETLSLRLHSMNPLHSSTSCFCTR*FPIREA Trigger: TGCCTCTCGGATGGGGAAGCATCTTGTGCAGAAACA...ACTTGTTGATGAATGCAAGGGATTCATAGAATGCAGACGCAGAGACAGAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| CDS-3UTR CCA 90 bp | GGACAACCAGCCTCAGGGTCAGAAGAATGCCAATTCACCAACCACTTCAAAATCGGGTCAAAGTCTTCCTaGTACTTTTTCTCCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQPASGSEECQFTNHFKIGSKSS*YFFSFR Trigger: TCTGAAGGAGAAAAAGTACCAGGAAGACTTTGACCC...GATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGACCCTGAGGCTGGTTGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
||
| CDS-3UTR TCA 90 bp | CATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACAACCAGCCTCAGATTAATTTCAAATaGCGTCATCTCTTGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HATTKIQNYREPRRDNQPQINFK*RHLLVA Trigger: TGCAACCAAGAGATGACGTCATTTGAAATTAATCTG...AGGCTGGTTGTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
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| CDS-3UTR TCA 90 bp | ATCCATTCAACACAGATCACTGAGAACAGAAACTCTGTCTCTGCGTCTGCATTCACATCTGTCTGCAAATaGGTTCTTTCAGCTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHSTQITENRNSVSASAFTSVCK*VLSAVP Trigger: TGGCACAGCTGAAAGAACTCATTTGCAGACAGATGT...GAATGCAGACGCAGAGACAGAGTTTCTGTTCTCAGTGATCTGTGTTGAATGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
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| CDS-3UTR GCA 90 bp | GGACAACCAGCCTCAGGGTCAGAAGAATGCCAATTCACCAACCACTTCAAAATCTTGGTTGCAACCAGTTaGTTCAATTTTCTTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GQPASGSEECQFTNHFKILVATS*FNFLCL Trigger: CAAGCAAAGAAAATTGAAGCAACTGGTTGCAACCAA...GATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGACCCTGAGGCTGGTTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
||
| CDS-3UTR GCA 90 bp | TATATTTTCCAGTTCTCAAAACATCTGTCTGCAAATGAGTTCTTTCAGCTGTGCTCTGGTTTCTGTGACTaGTGGATCCCCTTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YIFQFSKHLSANEFFQLCSGFCD*WIPLKA Trigger: GGCTTTCAAGGGGATCCAGCAGTCACAGAAACCAGA...GCACAGCTGAAAGAACTCATTTGCAGACAGATGTTTTGAGAACTGGAAAATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| CDS-3UTR CCA 90 bp | TACAAAATCCATTCAACACAGATCACTGAGAACAGAAACTCTGTCTCTGCGTCTTCCTCAGGATTCAGCTaGCAATCAAAGGTGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YKIHSTQITENRNSVSASSSGFS*QSKVKV Trigger: GACTTTCACCTTTGATTGCCAGCTGAATCCTGAGGA...AGACGCAGAGACAGAGTTTCTGTTCTCAGTGATCTGTGTTGAATGGATTTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
||
| CDS CCA 90 bp | GCCTGGGACCCCGTGGATGTTACGCAGCGTCTGATGTGTCAGGTGTaGGGCAGAGCCAGTCCTGGTGTAGAGAAGACAGCCCGGAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: AWDPVDVTQRLMCQV*GRASPGVEKTARNV Trigger: GACATTCCGGGCTGTCTTCTCTACACCAGGACTGGCTCTGCCCCACACCTGACACATCAGACGCTGCGTAACATCCACGGGGTCCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023387.14 ENSMUST00000131360.8 ENSMUST00000146343.8 ENSMUST00000156568.8 ENSMUST00000239112.2 |
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| CDS CCA 90 bp | TGTTACGCAGCGTCTGATGTGTCAGGTGTGGGGCAGAGCCAGTCCTaGTGTAGAGAAGACAGCCCGGAATGTCCACCGTGCAGTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CYAASDVSGVGQSQS*CREDSPECPPCSPL Trigger: CAGGGGACTGCACGGTGGACATTCCGGGCTGTCTTCTCTACACCAGGACTGGCTCTGCCCCACACCTGACACATCAGACGCTGCGTAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023387.14 ENSMUST00000131360.8 ENSMUST00000146343.8 ENSMUST00000156568.8 ENSMUST00000239112.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTGGTAGTTGTTGTGGTAGCCCTGAAGACAAAGGTATGGCCCAAAGCCCCCCCCCGACGGGTCGCTaGGCTGTCTCTCGTGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSCCGSPEDKGMAQSPPPTGR*AVSRAD Trigger: GTCAGCACGAGAGACAGCCAAGCGACCCGTCGGGGG...GGGGCTTTGGGCCATACCTTTGTCTTCAGGGCTACCACAACAACTACCACTTAG 59% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCCTGTCATGCCACCACAAAAATACAGAATTACAGAGAACCCCGGAGGGACCCCCCGACGGGTCGCTaGGCTGTCTCTCGTGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KPCHATTKIQNYREPRRDPPTGR*AVSRAD Trigger: GTCAGCACGAGAGACAGCCAAGCGACCCGTCGGGGG...GTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGGTGGCATGACAGGGCTT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCCTCCACCTGCGATGCCTGTCCCTGTTTACTCACGAGGGGACGGACACAGTGCAGTCCCCTGCTTaGCCCAGGTTTTGTATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FCLHLRCLSLFTHEGTDTVQSPA*PRFCIF Trigger: AAAAATACAAAACCTGGGCAAAGCAGGGGACTGCAC...TGTGTCCGTCCCCTCGTGAGTAAACAGGGACAGGCATCGCAGGTGGAGGCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGAATAGCTGTGCTTCCAGCTATGACAGCCATCTCCACTCGGGCCTCACCCCAGCCATTAACGACTTaGATGAGACTCAGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: QGIAVLPAMTAISTRASPQPLTT*MRLSFI Trigger: GATGAAGCTGAGTCTCATCAAAGTCGTTAATGGCTG...GGGTGAGGCCCGAGTGGAGATGGCTGTCATAGCTGGAAGCACAGCTATTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCTCGTTGGTCATCAGAAGATGGTGGATATACGCACGAGTGTGGTTCTTACAGCACTGGCCTTGGTTaGTCCTCTGGCAGCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AARWSSEDGGYTHECGSYSTGLG*SSGSSA Trigger: TGCAGAGCTGCCAGAGGACAAACCAAGGCCAGTGCT...GTAAGAACCACACTCGTGCGTATATCCACCATCTTCTGATGACCAACGAGCTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
||
| CDS TCA 90 bp | TTTTCTGGAGGACCTTACTTGTTACATAACCAGCTGGGCCGGGGGTaGCTGGATCGTGCAGGGAACAATAGAAGAGTGATTCCGGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: FSGGPYLLHNQLGRG*LDRAGNNRRVIPAC Trigger: GCATGCCGGAATCACTCTTCTATTGTTCCCTGCACGATCCAGTCACCCCCGGCCCAGCTGGTTATGTAACAAGTAAGGTCCTCCAGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
||
| CDS-3UTR CAA 90 bp | ATACGCACGAGTGTGGTTCTTACAGCAGTAACAGGAGCACCCTCTTACAAGCGGCAGCCATTAACGACTTaGATGAGACTCAGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: IRTSVVLTAVTGAPSYKRQPLTT*MRLSFI Trigger: GATGAAGCTGAGTCTCATCAAAGTCGTTAATGGCTG...CCGCTTGTAAGAGGGTGCTCCTGTTACTGCTGTAAGAACCACACTCGTGCGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146343.8 ENSMUST00000156568.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCTCGTTGGTCATCAGAAGATGGTGGATATACGCACGAGTGTGGTTCTTACCAGCCATTAACGACTTaGATGAGACTCAGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: AARWSSEDGGYTHECGSYQPLTT*MRLSFI Trigger: GATGAAGCTGAGTCTCATCAAAGTCGTTAATGGCTG...GTAAGAACCACACTCGTGCGTATATCCACCATCTTCTGATGACCAACGAGCTGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146343.8 ENSMUST00000156568.8 |
||
| CDS-3UTR CAA 90 bp | GGATCTGCACAACCAGACAGAGCAGCTAGGCAATATTTGGTTCCTCATGGGCAAGACGTCATCTCTTGGTaGCAACCAGTTGCTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: GSAQPDRAARQYLVPHGQDVISW*QPVASI Trigger: AATTGAAGCAACTGGTTGCAACCAAGAGATGACGTC...TTGCCCATGAGGAACCAAATATTGCCTAGCTGCTCTGTCTGGTTGTGCAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGAATGCCAATTCACCAACCACTTCAAAATCCACAGGACAATCTTATGGCAGATGAGCCTTGGTTaGTCCTCTGGCAGCTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SEECQFTNHFKIHRTILWQMSLG*SSGSSA Trigger: TGCAGAGCTGCCAGAGGACAAACCAAGGCTCATCTG...CCATAAGATTGTCCTGTGGATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
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| CDS-3UTR CAA 90 bp | GTCAGAAGAATGCCAATTCACCAACCACTTCAAAATCCACAGGACAATCTTATGAATCCAGCACTGGCCTaGGTTTGTCCTCTGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VRRMPIHQPLQNPQDNLMNPALA*VCPLAA Trigger: AGCTGCCAGAGGACAAACCAAGGCCAGTGCTGGATT...CATAAGATTGTCCTGTGGATTTTGAAGTGGTTGGTGAATTGGCATTCTTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| CDS TCA 90 bp | ACCTCAACCTCTCTTCCATCACATCTCCACCCTCAATCACTCCAATaGTCACACTTTTCTGGAGGACCTTACTTGTTACATAACCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: TSTSLPSHLHPQSLQ*SHFSGGPYLLHNQL Trigger: CAGCTGGTTATGTAACAAGTAAGGTCCTCCAGAAAAGTGTGATCATTGGAGTGATTGAGGGTGGAGATGTGATGGAAGAGAGGTTGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
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| CDS-3UTR CAA 90 bp | AAAAACTCTCAAACAAGTCCACTCCCCTTTCGATGCACTCTAGCACTTCGTCTGCAGCCATTAACGACTTaGATGAGACTCAGCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: KNSQTSPLPFRCTLALRLQPLTT*MRLSFI Trigger: GATGAAGCTGAGTCTCATCAAAGTCGTTAATGGCTG...CAGACGAAGTGCTAGAGTGCATCGAAAGGGGAGTGGACTTGTTTGAGAGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000131360.8 ENSMUST00000146343.8 ENSMUST00000156568.8 |
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| CDS-3UTR CAA 90 bp | AGAAACTCTGTCTCTGCGTCTGCATTCTATGAATCCCTTGCATTCATCAACAAGCCCGTTTTATGGAAGTaGTTTCTGCACAAGATGCTT | + |
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Preference number: 5 (lower is better) Translates to: RNSVSASAFYESLAFINKPVLWK*FLHKML Trigger: AAGCATCTTGTGCAGAAACAACTTCCATAAAACGGG...CTTGTTGATGAATGCAAGGGATTCATAGAATGCAGACGCAGAGACAGAGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| CDS TCA 72 bp | GCTATGCCTGGGACCCCGTGGATGTTACGCAGCGTCTaGTGTGTCAGGTGTGGGGCAGAGCCAGTCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: AMPGTPWMLRSV*CVRCGAEPVLV Trigger: CACCAGGACTGGCTCTGCCCCACACCTGACACATCAGACGCTGCGTAACATCCACGGGGTCCCAGGCATAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023387.14 ENSMUST00000131360.8 ENSMUST00000146343.8 ENSMUST00000156568.8 ENSMUST00000239112.2 |
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| CDS CCA 72 bp | CCACCCACAAGGCTGGCCTGCATCCCAATCCAGCACTaGCCTTGGTTTGTCCTCTGGCAGCTCTGCAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: PPTRLACIPIQH*PWFVLWQLCSD Trigger: GTCACTGCAGAGCTGCCAGAGGACAAACCAAGGCCAGTGCTGGATTGGGATGCAGGCCAGCCTTGTGGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| CDS CAA 72 bp | GGCTGGCCTGCATCCCAATCCAGCACTGGCCTTGGTTaGTCCTCTGGCAGCTCTGCAGTGACTGATGACAGC | + |
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Preference number: 6 (lower is better) Translates to: GWPASQSSTGLG*SSGSSAVTDDS Trigger: GCTGTCATCAGTCACTGCAGAGCTGCCAGAGGACAAACCAAGGCCAGTGCTGGATTGGGATGCAGGCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156568.8 |
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| CDS TCA 72 bp | CCAAGACTTCATGATGTTCTGCTAGGGATGAGAGTGTaGGCTGGGCTATGCCTGGGACCCCGTGGATGTTAC | + |
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Preference number: 6 (lower is better) Translates to: PRLHDVLLGMRV*AGLCLGPRGCY Trigger: GTAACATCCACGGGGTCCCAGGCATAGCCCAGCTCACACTCTCATCCCTAGCAGAACATCATGAAGTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 ENSMUST00000239112.2 |
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| CDS CCA 72 bp | ACTTTTCTGGAGGACCTTACTTGTTACATAACCAGCTaGGCCGGGGGTGACTGGATCGTGCAGGGAACAATA | + |
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Preference number: 6 (lower is better) Translates to: TFLEDLTCYITS*AGGDWIVQGTI Trigger: TATTGTTCCCTGCACGATCCAGTCACCCCCGGCCCAGCTGGTTATGTAACAAGTAAGGTCCTCCAGAAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023387.14 |
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| CDS TCA 72 bp | CTTCCAACTCCTTTCTTATATTCTGCCAAGACTTCATaGTGTTCTGCTAGGGATGAGAGTGTGAGCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LPTPFLYSAKTS*CSARDESVSWA Trigger: AGCCCAGCTCACACTCTCATCCCTAGCAGAACATCATGAAGTCTTGGCAGAATATAAGAAAGGAGTTGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023387.14 ENSMUST00000156568.8 ENSMUST00000239112.2 |
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