Pregenerated sensors for QTRT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002825Ensembl transcript IDs: ENSMUST00000002902.8, ENSMUST00000213718.2, ENSMUST00000214681.2, ENSMUST00000216277.2, ENSMUST00000216527.2, ENSMUST00000217060.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACCCTGGATGATGGCAAAGAGGTTCTGCTTGTCCGGGTGCTTATaGGCTGCGATGCATCTGTCCAGCCAGCGGACTGACCTGTGCATG | + |
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Preference number: 1 (lower is better) Translates to: PPWMMAKRFCLSGCL*AAMHLSSQRTDLCM Trigger: CATGCACAGGTCAGTCCGCTGGCTGGACAGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR GCA 90 bp | TTCAGTCCACCCTGGATGATGGCAAAGAGGTTCTGCTTGTCCGGGTaGTTATGGGCTGCGATGCATCTGTCCAGCCAGCGGACTGACCTG | + |
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Preference number: 1 (lower is better) Translates to: FSPPWMMAKRFCLSG*LWAAMHLSSQRTDL Trigger: CAGGTCAGTCCGCTGGCTGGACAGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR CCA 90 bp | GCCTCCTCAGACACCCAGAGCATTCTGGATCTCCACCGACCTCTCTaGGCTCAAAAGTGTCTCTTCTCCATCGTAGGGCGAGCGGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: ASSDTQSILDLHRPL*AQKCLFSIVGRAEV Trigger: CACTTCCGCTCGCCCTACGATGGAGAAGAGACACTTTTGAGCCCAGAGAGGTCGGTGGAGATCCAGAATGCTCTGGGTGTCTGAGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR CCA 90 bp | GATGATGTCCGAGCCCAGAGCATTCTGGATCTCCACCGACCTCTCTaGGCTCAAAAGTGTCTCTTCTCCATCGTAGGGCGAGCGGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: DDVRAQSILDLHRPL*AQKCLFSIVGRAEV Trigger: CACTTCCGCTCGCCCTACGATGGAGAAGAGACACTTTTGAGCCCAGAGAGGTCGGTGGAGATCCAGAATGCTCTGGGCTCGGACATCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 ENSMUST00000216527.2 |
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| 3UTR GCA 90 bp | TCCACTAGAGGGCCTGTCACTGTGCTGCTCACCACATGGTCTAACTaGATGATGATGTCCGAGCCCAGAGCATTCTGGATCTCCACCGAC | + |
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Preference number: 1 (lower is better) Translates to: STRGPVTVLLTTWSN*MMMSEPRAFWISTD Trigger: GTCGGTGGAGATCCAGAATGCTCTGGGCTCGGACATCATCATGCAGTTAGACCATGTGGTGAGCAGCACAGTGACAGGCCCTCTAGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 |
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| 3UTR GCA 90 bp | CGAAGATCAGCATTCAGTCCACCCTGGATGATGGCAAAGAGGTTCTaGTTGTCCGGGTGCTTATGGGCTGCGATGCATCTGTCCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: RRSAFSPPWMMAKRF*LSGCLWAAMHLSSQ Trigger: CTGGCTGGACAGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR CCA 90 bp | ATGGCCTCCTCCACTAGAGGGCCTGTCACTGTGCTGCTCACCACATaGTCTAACTGCATGATGATGTCCGAGCCCAGAGCATTCTGGATC | + |
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Preference number: 1 (lower is better) Translates to: MASSTRGPVTVLLTT*SNCMMMSEPRAFWI Trigger: GATCCAGAATGCTCTGGGCTCGGACATCATCATGCAGTTAGACCATGTGGTGAGCAGCACAGTGACAGGCCCTCTAGTGGAGGAGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 |
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| 3UTR GCA 90 bp | TCCACTAGAGGGCCTGTCACTGTGCTGCTCACCACATGGTCTAACTaGATGATGATGTCCGAGCTGTTCTTCCAGATGACCCAGACTCGC | + |
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Preference number: 1 (lower is better) Translates to: STRGPVTVLLTTWSN*MMMSELFFQMTQTR Trigger: GCGAGTCTGGGTCATCTGGAAGAACAGCTCGGACATCATCATGCAGTTAGACCATGTGGTGAGCAGCACAGTGACAGGCCCTCTAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR CCA 90 bp | CTCCTCCACTCAGACCTCCGATGGCGAAGCCCGGCACATCTCTCTTaGTCATCTCTTTCAGACAAGTGGTCCGAAGATCAGCATTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: LLHSDLRWRSPAHLS*SSLSDKWSEDQHSV Trigger: GACTGAATGCTGATCTTCGGACCACTTGTCTGAAAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213718.2 |
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| 3UTR CCA 90 bp | ATGGCCTCCTCCACTAGAGGGCCTGTCACTGTGCTGCTCACCACATaGTCTAACTGCATGATGATGTCCGAGCTGTTCTTCCAGATGACC | + |
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Preference number: 1 (lower is better) Translates to: MASSTRGPVTVLLTT*SNCMMMSELFFQMT Trigger: GGTCATCTGGAAGAACAGCTCGGACATCATCATGCAGTTAGACCATGTGGTGAGCAGCACAGTGACAGGCCCTCTAGTGGAGGAGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR CCA 90 bp | CTCCTCCACTCAGACCTCCGATGGCGAAGCCCGGCACATCTCTCTTaGTCATCTCTGACTCTACCTTTCAGACAAGTGGTCCGAAGATCA | + |
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Preference number: 1 (lower is better) Translates to: LLHSDLRWRSPAHLS*SSLTLPFRQVVRRS Trigger: TGATCTTCGGACCACTTGTCTGAAAGGTAGAGTCAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR CCA 90 bp | TCTTCCAGAACTGTGCCTTGCTTTCTCCTCCACTCAGACCTCCGATaGCGAAGCCCGGCACATCTCTCTTGGTCATCTCTGACTCTACCT | + |
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Preference number: 1 (lower is better) Translates to: SSRTVPCFLLHSDLR*RSPAHLSWSSLTLP Trigger: AGGTAGAGTCAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGTTCTGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR TCA 90 bp | CTTTCAGACAAGTGGTCCGAAGATCAGCATTCAGTCCACCCTGGATaGTGGCAAAGAGGTTCTGCTTGTCCGGGTGCTTATGGGCTGCGA | + |
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Preference number: 1 (lower is better) Translates to: LSDKWSEDQHSVHPG*WQRGSACPGAYGLR Trigger: TCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCGGACCACTTGTCTGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR TCA 90 bp | CAGACCTCCGATGGCGAAGCCCGGCACATCTCTCTTGGTCATCTCTaGCTCTACCTTTCAGACAAGTGGTCCGAAGATCAGCATTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: QTSDGEARHISLGHL*LYLSDKWSEDQHSV Trigger: GACTGAATGCTGATCTTCGGACCACTTGTCTGAAAGGTAGAGTCAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR CCA 90 bp | ACCACATGGTCTAACTGCATGATGATGTCCGAGCCCAGAGCATTCTaGATCTCCACCGACCTCTCTGGGCTCAAAAGTGTCTCTTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: TTWSNCMMMSEPRAF*ISTDLSGLKSVSSP Trigger: TGGAGAAGAGACACTTTTGAGCCCAGAGAGGTCGGTGGAGATCCAGAATGCTCTGGGCTCGGACATCATCATGCAGTTAGACCATGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 ENSMUST00000216527.2 |
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| 3UTR CCA 90 bp | CTACCTTTCAGACAAGTGGTCCGAAGATCAGCATTCAGTCCACCCTaGATGATGGCAAAGAGGTTCTGCTTGTCCGGGTGCTTATGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LPFRQVVRRSAFSPP*MMAKRFCLSGCLWA Trigger: AGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCGGACCACTTGTCTGAAAGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR CCA 90 bp | ATCTCTTTCAGACAAGTGGTCCGAAGATCAGCATTCAGTCCACCCTaGATGATGGCAAAGAGGTTCTGCTTGTCCGGGTGCTTATGGGCT | + |
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Preference number: 1 (lower is better) Translates to: ISFRQVVRRSAFSPP*MMAKRFCLSGCLWA Trigger: AGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCGGACCACTTGTCTGAAAGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAACTGTGCCTTGCTTTCTCCTCCACTCAGACCTCCGATGGCGAAGCCCGGCGCTTATGGGCTGCGATaGATCTGTCCAGCCAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: QNCALLSPPLRPPMAKPGAYGLR*ICPASG Trigger: TCCGCTGGCTGGACAGATGCATCGCAGCCCATAAGC...GCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGTTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTGTGCCTTGCTTTCTCCTCCACTCAGACCTCCGATGGCGAAGCCCGGCACTCAGTCCACCCTGGATaGTGGCAAAGAGGTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: ELCLAFSSTQTSDGEARHSVHPG*WQRGSA Trigger: AGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGA...GTGCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCGGGTGCTTATGGGCTGCGATGCATCTGTCCAGCCAGCGGACTGACCTGGGCCTGTCACTGTGCTaGTCACCACATGGTCTAACT | + |
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Preference number: 2 (lower is better) Translates to: LSGCLWAAMHLSSQRTDLGLSLC*SPHGLT Trigger: AGTTAGACCATGTGGTGAGCAGCACAGTGACAGGCC...CAGGTCAGTCCGCTGGCTGGACAGATGCATCGCAGCCCATAAGCACCCGGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR CAA 90 bp | AGATCAGCATTCAGTCCACCCTGGATGATGGCAAAGAGGTTCTGCTaGTCCGGGTGCTTATGGGCTGCGATGCATCTGTCCAGCCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: RSAFSPPWMMAKRFC*SGCLWAAMHLSSQR Trigger: CCGCTGGCTGGACAGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTGTCCAGCCAGCGGACTGACCTGTGCATGGCCTCCTCCACTAGAGGGCCTGTGCTGCTCACCACATaGTCTAACTGCATGATGATG | + |
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Preference number: 2 (lower is better) Translates to: HLSSQRTDLCMASSTRGPVLLTT*SNCMMM Trigger: CATCATCATGCAGTTAGACCATGTGGTGAGCAGCAC...AGGCCCTCTAGTGGAGGAGGCCATGCACAGGTCAGTCCGCTGGCTGGACAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR GCA 90 bp | GATGATGGCAAAGAGGTTCTGCTTGTCCGGGTGCTTATGGGCTGCGATGCATCTGCTTATGGGCTGCGATaGATCTGTCCAGCCAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: DDGKEVLLVRVLMGCDASAYGLR*ICPASG Trigger: TCCGCTGGCTGGACAGATGCATCGCAGCCCATAAGC...AGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR CCA 90 bp | CGCAGACCACCAAATCGGTGGCATAGCCAACCCCCATCAGGTATCGTGGCTTGTCCCCATCAGGTATCGTaGCTTGTCCTTAGGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: RRPPNRWHSQPPSGIVACPHQVS*LVLRQH Trigger: ATGCTGCCTAAGGACAAGCCACGATACCTGATGGGG...ACAAGCCACGATACCTGATGGGGGTTGGCTATGCCACCGATTTGGTGGTCTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR CAA 90 bp | TCTCCTCCACTCAGACCTCCGATGGCGAAGCCCGGCACATCTCTCTaGGTCATCTCTGACTCTACCTTTCAGACAAGTGGTCCGAAGATC | + |
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Preference number: 2 (lower is better) Translates to: SPPLRPPMAKPGTSL*VISDSTFQTSGPKI Trigger: GATCTTCGGACCACTTGTCTGAAAGGTAGAGTCAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCTTCCAGAACTGTGCCTTGCTTTCTCCTCCACTCAGACCTCCGATGGCGATCAGTCCACCCTGGATaGTGGCAAAGAGGTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PSSRTVPCFLLHSDLRWRSVHPG*WQRGSA Trigger: AGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGA...TCGCCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGTTCTGGAAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGAGGTTCTGCTTGTCCGGGTGCTTATGGGCTGCGATGCATCTGTCCAGCACCACATGGTCTAACTaGATGATGATGTCCGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: AKRFCLSGCLWAAMHLSSTTWSN*MMMSEP Trigger: GGGCTCGGACATCATCATGCAGTTAGACCATGTGGT...GCTGGACAGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGGTCCGAAGATCAGCATTCAGTCCACCCTGGATGATGGCAAAGAGGTTCCAGCGGACTGACCTGTaGATGGCCTCCTCCACTAGA | + |
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Preference number: 2 (lower is better) Translates to: QVVRRSAFSPPWMMAKRFQRTDL*MASSTR Trigger: TCTAGTGGAGGAGGCCATGCACAGGTCAGTCCGCTG...GAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCGGACCACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCTTCCAGAACTGTGCCTTGCTTTCTCCTCCACTCAGACCTCCGATGGCGATTCTGCTTGTCCGGGTaGTTATGGGCTGCGATGCAT | + |
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Preference number: 2 (lower is better) Translates to: PSSRTVPCFLLHSDLRWRFCLSG*LWAAMH Trigger: ATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAA...TCGCCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGTTCTGGAAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
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| 3UTR-3UTR GCA 90 bp | CGCAGACCACCAAATCGGTGGCATAGCCAACCCCCATCAGGTATCGTGGCTTGTTCCAGAACTGTGCCTTaGTTTCTCCTCCACTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: RRPPNRWHSQPPSGIVACSRTVP*FLLHSD Trigger: GTCTGAGTGGAGGAGAAAGCAAGGCACAGTTCTGGA...ACAAGCCACGATACCTGATGGGGGTTGGCTATGCCACCGATTTGGTGGTCTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR CAA 90 bp | TCTCCTCCACTCAGACCTCCGATGGCGAAGCCCGGCACATCTCTCTaGGTCATCTCTTTCAGACAAGTGGTCCGAAGATCAGCATTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SPPLRPPMAKPGTSL*VISFRQVVRRSAFS Trigger: ACTGAATGCTGATCTTCGGACCACTTGTCTGAAAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213718.2 |
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| 3UTR-3UTR GCA 90 bp | CGAAGATCAGCATTCAGTCCACCCTGGATGATGGCAAAGAGGTTCTGCTTGTCCGGCCTGTCACTGTGCTaGTCACCACATGGTCTAACT | + |
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Preference number: 2 (lower is better) Translates to: RRSAFSPPWMMAKRFCLSGLSLC*SPHGLT Trigger: AGTTAGACCATGTGGTGAGCAGCACAGTGACAGGCC...GGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR GCA 90 bp | AGACAAGTGGTCCGAAGATCAGCATTCAGTCCACCCTGGATGATGGCAAAGAGGTTCTGCTTGTCCGGGTaGTTATGGGCTGCGATGCAT | + |
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Preference number: 2 (lower is better) Translates to: RQVVRRSAFSPPWMMAKRFCLSG*LWAAMH Trigger: ATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAA...CCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCGGACCACTTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTGGATGATGGCAAAGAGGTTCTGCTTGTCCGGGTGCTTATGGGCTGCGATGTGCTGCTCACCACATaGTCTAACTGCATGATGATG | + |
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Preference number: 2 (lower is better) Translates to: TLDDGKEVLLVRVLMGCDVLLTT*SNCMMM Trigger: CATCATCATGCAGTTAGACCATGTGGTGAGCAGCAC...ATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGACAAGTGGTCCGAAGATCAGCATTCAGTCCACCCTGGATGATGGCAAAGACCACATGGTCTAACTaGATGATGATGTCCGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: FRQVVRRSAFSPPWMMAKTTWSN*MMMSEP Trigger: GGGCTCGGACATCATCATGCAGTTAGACCATGTGGT...CTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCGGACCACTTGTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGGTCCGAAGATCAGCATTCAGTCCACCCTGGATGATGGCAAAGAGGTTCGTGCTGCTCACCACATaGTCTAACTGCATGATGATG | + |
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Preference number: 2 (lower is better) Translates to: QVVRRSAFSPPWMMAKRFVLLTT*SNCMMM Trigger: CATCATCATGCAGTTAGACCATGTGGTGAGCAGCAC...GAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCGGACCACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCCCGGCACATCTCTCTTGGTCATCTCTGACTCTACCTTTCAGACAAGTGGTAAAATCTACTCCCTCTaGCCTCCTCAGACACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: KPGTSLLVISDSTFQTSGKIYSL*PPQTPR Trigger: TCTGGGTGTCTGAGGAGGCCAGAGGGAGTAGATTTT...ACCACTTGTCTGAAAGGTAGAGTCAGAGATGACCAAGAGAGATGTGCCGGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR GCA 72 bp | AGAGGTTCTGCTTGTCCGGGTGCTTATGGGCTGCGATaGATCTGTCCAGCCAGCGGACTGACCTGTGCATGG | + |
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Preference number: 3 (lower is better) Translates to: RGSACPGAYGLR*ICPASGLTCAW Trigger: CCATGCACAGGTCAGTCCGCTGGCTGGACAGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR GCA 72 bp | CCCTGGATGATGGCAAAGAGGTTCTGCTTGTCCGGGTaGTTATGGGCTGCGATGCATCTGTCCAGCCAGCGG | + |
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Preference number: 3 (lower is better) Translates to: PWMMAKRFCLSG*LWAAMHLSSQR Trigger: CCGCTGGCTGGACAGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTGTGCCTTGCTTTCTCCTCCACTCAGACCTCCGATGGCGAAGCCCGGCACCCCGGCACATCTCTCTaGGTCATCTCTTTCAGACAA | + |
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Preference number: 3 (lower is better) Translates to: ELCLAFSSTQTSDGEARHPGTSL*VISFRQ Trigger: TTGTCTGAAAGAGATGACCAAGAGAGATGTGCCGGG...GTGCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213718.2 |
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| 3UTR CCA 72 bp | CGAGCCCAGAGCATTCTGGATCTCCACCGACCTCTCTaGGCTCAAAAGTGTCTCTTCTCCATCGTAGGGCGA | + |
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Preference number: 3 (lower is better) Translates to: RAQSILDLHRPL*AQKCLFSIVGR Trigger: TCGCCCTACGATGGAGAAGAGACACTTTTGAGCCCAGAGAGGTCGGTGGAGATCCAGAATGCTCTGGGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 ENSMUST00000216527.2 |
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| 3UTR CCA 72 bp | ATGATGGCAAAGAGGTTCTGCTTGTCCGGGTGCTTATaGGCTGCGATGCATCTGTCCAGCCAGCGGACTGAC | + |
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Preference number: 3 (lower is better) Translates to: MMAKRFCLSGCL*AAMHLSSQRTD Trigger: GTCAGTCCGCTGGCTGGACAGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
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| 3UTR CCA 72 bp | TACTCCCTCTGGCCTCCTCAGACACCCAGAGCATTCTaGATCTCCACCGACCTCTCTGGGCTCAAAAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: YSLWPPQTPRAF*ISTDLSGLKSV Trigger: GACACTTTTGAGCCCAGAGAGGTCGGTGGAGATCCAGAATGCTCTGGGTGTCTGAGGAGGCCAGAGGGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
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| 3UTR CCA 72 bp | ACTGTGCCTTGCTTTCTCCTCCACTCAGACCTCCGATaGCGAAGCCCGGCACATCTCTCTTGGTCATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVPCFLLHSDLR*RSPAHLSWSSL Trigger: CAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
||
| 3UTR CCA 72 bp | CAAATCGGTGGCATAGCCAACCCCCATCAGGTATCGTaGCTTGTCCTTAGGCAGCATGGAGGTGCTCAACGC | + |
|
Preference number: 3 (lower is better) Translates to: QIGGIANPHQVS*LVLRQHGGAQR Trigger: GCGTTGAGCACCTCCATGCTGCCTAAGGACAAGCCACGATACCTGATGGGGGTTGGCTATGCCACCGATTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACCATCTTCCAGAACTGTGCCTTGCTTTCTCCTCCACTCAGACCTCCGATGGGCAAAGAGGTTCTGCTaGTCCGGGTGCTTATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPSSRTVPCFLLHSDLRWAKRFC*SGCLWA Trigger: AGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGC...CCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGTTCTGGAAGATGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
||
| 3UTR CCA 72 bp | TCCACTAGAGGGCCTGTCACTGTGCTGCTCACCACATaGTCTAACTGCATGATGATGTCCGAGCCCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: STRGPVTVLLTT*SNCMMMSEPRA Trigger: TGCTCTGGGCTCGGACATCATCATGCAGTTAGACCATGTGGTGAGCAGCACAGTGACAGGCCCTCTAGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 |
||
| 3UTR CCA 72 bp | ACTGTGCCTTGCTTTCTCCTCCACTCAGACCTCCGATaGCGAAGCCCGGCACATCTCTCTTGGTCATCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TVPCFLLHSDLR*RSPAHLSWSSL Trigger: AAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213718.2 |
||
| 3UTR CCA 72 bp | GACACCCAGAGCATTCTGGATCTCCACCGACCTCTCTaGGCTCAAAAGTGTCTCTTCTCCATCGTAGGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: DTQSILDLHRPL*AQKCLFSIVGR Trigger: TCGCCCTACGATGGAGAAGAGACACTTTTGAGCCCAGAGAGGTCGGTGGAGATCCAGAATGCTCTGGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
||
| 3UTR CCA 72 bp | AGACAAGTGGTCCGAAGATCAGCATTCAGTCCACCCTaGATGATGGCAAAGAGGTTCTGCTTGTCCGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RQVVRRSAFSPP*MMAKRFCLSGC Trigger: GCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCGGACCACTTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
||
| 3UTR CCA 72 bp | TCAGACCTCCGATGGCGAAGCCCGGCACATCTCTCTTaGTCATCTCTTTCAGACAAGTGGTCCGAAGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: SDLRWRSPAHLS*SSLSDKWSEDQ Trigger: CTGATCTTCGGACCACTTGTCTGAAAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213718.2 |
||
| 3UTR CCA 72 bp | TCAGACCTCCGATGGCGAAGCCCGGCACATCTCTCTTaGTCATCTCTGACTCTACCTTTCAGACAAGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SDLRWRSPAHLS*SSLTLPFRQVV Trigger: GACCACTTGTCTGAAAGGTAGAGTCAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGGTCCGAAGATCAGCATTCAGTCCACCCTGGATGATGGCAAAGAGGTTCGCAAAGAGGTTCTGCTaGTCCGGGTGCTTATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QVVRRSAFSPPWMMAKRFAKRFC*SGCLWA Trigger: AGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGC...GAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGATCTTCGGACCACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
||
| 3UTR TCA 72 bp | GATGGCGAAGCCCGGCACATCTCTCTTGGTCATCTCTaGCTCTACCTTTCAGACAAGTGGTCCGAAGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: DGEARHISLGHL*LYLSDKWSEDQ Trigger: CTGATCTTCGGACCACTTGTCTGAAAGGTAGAGTCAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
||
| 3UTR CCA 72 bp | TCTAACTGCATGATGATGTCCGAGCCCAGAGCATTCTaGATCTCCACCGACCTCTCTGGGCTCAAAAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SNCMMMSEPRAF*ISTDLSGLKSV Trigger: GACACTTTTGAGCCCAGAGAGGTCGGTGGAGATCCAGAATGCTCTGGGCTCGGACATCATCATGCAGTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 ENSMUST00000216527.2 |
||
| 3UTR CCA 72 bp | TCCACTAGAGGGCCTGTCACTGTGCTGCTCACCACATaGTCTAACTGCATGATGATGTCCGAGCTGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: STRGPVTVLLTT*SNCMMMSELFF Trigger: GAAGAACAGCTCGGACATCATCATGCAGTTAGACCATGTGGTGAGCAGCACAGTGACAGGCCCTCTAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
||
| CDS-3UTR CCA 90 bp | GTGGACGCCCTCCTCCGTCACCTCGGACAGGGAGAAGAGGGACACCATCTGGAACCCTTCATGGTGGCCTaGGCTGCCTACCGCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VDALLRHLGQGEEGHHLEPFMVA*AAYRRH Trigger: ATGGCGGCGGTAGGCAGCCCAGGCCACCATGAAGGG...TTCCAGATGGTGTCCCTCTTCTCCCTGTCCGAGGTGACGGAGGAGGGCGTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216527.2 |
||
| CDS-3UTR TCA 90 bp | ACGCCCTCCTCCGTCACCTCGGACAGGGAGAAGAGGGACACCATCTGGAAGCCGCCAGCTGCTCCGTGGTaGTACCCTTCATGGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSSVTSDREKRDTIWKPPAAPW*YPSWWP Trigger: AGGCCACCATGAAGGGTATCACCACGGAGCAGCTGG...CGGCTTCCAGATGGTGTCCCTCTTCTCCCTGTCCGAGGTGACGGAGGAGGGCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216527.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCGAGCGGAAGTGGACGCCCTCCTCCGTCACCTCGGACAGGGAGAAGAGGGCAATTCATGAAGCCGTaGAGACCCTGGGCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RASGSGRPPPSPRTGRRGQFMKP*RPWAFR Trigger: CCGGAAAGCCCAGGGTCTTCACGGCTTCATGAATTG...CCCTCTTCTCCCTGTCCGAGGTGACGGAGGAGGGCGTCCACTTCCGCTCGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216527.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTCCATCGTAGGGCGAGCGGAAGTGGACGCCCTCCTCCGTCACCTCGGATGTTGCCCAAGCAGATaGGGCAGCCCAGGGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSIVGRAEVDALLRHLGCCPSR*GSPGSP Trigger: TGGACTCCCTGGGCTGCCGCATCTGCTTGGGCAACA...TCCGAGGTGACGGAGGAGGGCGTCCACTTCCGCTCGCCCTACGATGGAGAAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216527.2 |
||
| CDS-3UTR TCA 90 bp | CGTAGGGCGAGCGGAAGTGGACGCCCTCCTCCGTCACCTCGGACAGGGAGAAGACAATTCATGAAGCCGTaGAGACCCTGGGCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRASGSGRPPPSPRTGRRQFMKP*RPWAFR Trigger: CCGGAAAGCCCAGGGTCTTCACGGCTTCATGAATTG...TCTTCTCCCTGTCCGAGGTGACGGAGGAGGGCGTCCACTTCCGCTCGCCCTACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216527.2 |
||
| CDS-3UTR TCA 90 bp | AGCGGAAGTGGACGCCCTCCTCCGTCACCTCGGACAGGGAGAAGAGGGACACCATGTGGGGCCAATTCATaGAGCCGTGAAGACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGSGRPPPSPRTGRRGTPCGANS*SREDPG Trigger: CCCAGGGTCTTCACGGCTTCATGAATTGGCCCCACA...TGGTGTCCCTCTTCTCCCTGTCCGAGGTGACGGAGGAGGGCGTCCACTTCCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216527.2 |
||
| CDS-3UTR TCA 90 bp | CATCTGTCCAGCCAGCGGACTGACCTGTGCATGGCCTCCTCCACTAGAGGGCCTTGTGGGGCCAATTCATaGAGCCGTGAAGACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLSSQRTDLCMASSTRGPCGANS*SREDPG Trigger: CCCAGGGTCTTCACGGCTTCATGAATTGGCCCCACA...AGGCCCTCTAGTGGAGGAGGCCATGCACAGGTCAGTCCGCTGGCTGGACAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
||
| CDS-3UTR TCA 90 bp | CGGACTGACCTGTGCATGGCCTCCTCCACTAGAGGGCCTGTCACTGTGCTGCTCTGTGGGGCCAATTCATaGAGCCGTGAAGACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTDLCMASSTRGPVTVLLCGANS*SREDPG Trigger: CCCAGGGTCTTCACGGCTTCATGAATTGGCCCCACA...GAGCAGCACAGTGACAGGCCCTCTAGTGGAGGAGGCCATGCACAGGTCAGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAAGTGTCTCTTCTCCATCGTAGGGCGAGCGGAAGTGGACGCCCTCCTCCGTGTGGGGCCAATTCATaGAGCCGTGAAGACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKVSLLHRRASGSGRPPPCGANS*SREDPG Trigger: CCCAGGGTCTTCACGGCTTCATGAATTGGCCCCACA...CGGAGGAGGGCGTCCACTTCCGCTCGCCCTACGATGGAGAAGAGACACTTTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 ENSMUST00000216527.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGTGTCTCTTCTCCATCGTAGGGCGAGCGGAAGTGGACGCCCTCCTCCGTCCAGATGGTAGGTGTTaGCCAAGCAGATGCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKCLFSIVGRAEVDALLRPDGRC*PSRCGS Trigger: GCTGCCGCATCTGCTTGGGCAACACCTACCATCTGG...ACGGAGGAGGGCGTCCACTTCCGCTCGCCCTACGATGGAGAAGAGACACTTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216527.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTTGCTTTCTCCTCCACTCAGACCTCCGATGGCGAAGCCCGGCACATCTCTCAATTCATGAAGCCGTaGAGACCCTGGGCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CLAFSSTQTSDGEARHISQFMKP*RPWAFR Trigger: CCGGAAAGCCCAGGGTCTTCACGGCTTCATGAATTG...AGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGCTTGTCCGGGTGCTTATGGGCTGCGATGCATCTGTCCAGCCAGCGGATCCGTCAGCAGATTGTaGGGCCAATTCATGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSACPGAYGLRCICPASGSVSRL*GQFMKP Trigger: CGGCTTCATGAATTGGCCCCACAATCTGCTGACGGA...TCCGCTGGCTGGACAGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGTGTCTCTTCTCCATCGTAGGGCGAGCGGAAGTGGACGCCCTCCTCCGTCCGTCAGCAGATTGTaGGGCCAATTCATGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SKVSLLHRRASGSGRPPPSVSRL*GQFMKP Trigger: CGGCTTCATGAATTGGCCCCACAATCTGCTGACGGA...CGGAGGAGGGCGTCCACTTCCGCTCGCCCTACGATGGAGAAGAGACACTTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216527.2 |
||
| 3UTR CAA 72 bp | GAGGTGCTCAACGCCACCATCTTCCAGAACTGTGCCTaGCTTTCTCCTCCACTCAGACCTCCGATGGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVLNATIFQNCA*LSPPLRPPMAK Trigger: CTTCGCCATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGTTCTGGAAGATGGTGGCGTTGAGCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTCACTGTGCTGCTCACCACATGGTCTAACTGCATGATGATGTCCGAGCCCCAATTCATGAAGCCGTaGAGACCCTGGGCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTVLLTTWSNCMMMSEPQFMKP*RPWAFR Trigger: CCGGAAAGCCCAGGGTCTTCACGGCTTCATGAATTG...GGGCTCGGACATCATCATGCAGTTAGACCATGTGGTGAGCAGCACAGTGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000216277.2 |
||
| 3UTR CAA 72 bp | TTCAGTCCACCCTGGATGATGGCAAAGAGGTTCTGCTaGTCCGGGTGCTTATGGGCTGCGATGCATCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSPPWMMAKRFC*SGCLWAAMHLS Trigger: GGACAGATGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216277.2 |
||
| CDS-3UTR CCA 90 bp | GCCACCATCTTCCAGAACTGTGCCTTGCTTTCTCCTCCACTCAGACCTCCGATGTCCGTCAGCAGATTGTaGGGCCAATTCATGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ATIFQNCALLSPPLRPPMSVSRL*GQFMKP Trigger: CGGCTTCATGAATTGGCCCCACAATCTGCTGACGGA...CATCGGAGGTCTGAGTGGAGGAGAAAGCAAGGCACAGTTCTGGAAGATGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATGATGGCAAAGAGGTTCTGCTTGTCCGGGTGCTTATGGGCTGCGATGCAAGCGTCAGCAGATTGTaGGGCCAATTCATGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LDDGKEVLLVRVLMGCDASVSRL*GQFMKP Trigger: CGGCTTCATGAATTGGCCCCACAATCTGCTGACGCT...TGCATCGCAGCCCATAAGCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216277.2 |
||
| 3UTR CAA 72 bp | CTCAGACCTCCGATGGCGAAGCCCGGCACATCTCTCTaGGTCATCTCTTTCAGACAAGTGGTCCGAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LRPPMAKPGTSL*VISFRQVVRRS Trigger: TGATCTTCGGACCACTTGTCTGAAAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213718.2 |
||
| 3UTR CAA 72 bp | CTCAGACCTCCGATGGCGAAGCCCGGCACATCTCTCTaGGTCATCTCTGACTCTACCTTTCAGACAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRPPMAKPGTSL*VISDSTFQTSG Trigger: ACCACTTGTCTGAAAGGTAGAGTCAGAGATGACCAAGAGAGATGTGCCGGGCTTCGCCATCGGAGGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214681.2 |
||
| CDS GCA 90 bp | GCCTGTGTACCCACAGGCATGAACACAGGGGTGGCTACCGTTCCATaGGGCAGCCGCAGCTCACCCGCCCGAGCTCCGGAGCGACTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ACVPTGMNTGVATVP*GSRSSPARAPERLH Trigger: GTGCAGTCGCTCCGGAGCTCGGGCGGGTGAGCTGCGGCTGCCGCATGGAACGGTAGCCACCCCTGTGTTCATGCCTGTGGGTACACAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
||
| CDS GCA 90 bp | TTCCATGCGGCAGCCGCAGCTCACCCGCCCGAGCTCCGGAGCGACTaGACTCAGCGACCAGCCGCATTATTCGTGGAGCGGACTCAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: FHAAAAAHPPELRSD*TQRPAALFVERTQA Trigger: CGCTTGAGTCCGCTCCACGAATAATGCGGCTGGTCGCTGAGTGCAGTCGCTCCGGAGCTCGGGCGGGTGAGCTGCGGCTGCCGCATGGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
||
| CDS GCA 90 bp | GGCTTTCCGGATCAGCTCCGGTCCCCGCCCGAGCTCCGGAGCGACTaGACTCAGCGACCAGCCGCATTATTCGTGGAGCGGACTCAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GFPDQLRSPPELRSD*TQRPAALFVERTQA Trigger: CGCTTGAGTCCGCTCCACGAATAATGCGGCTGGTCGCTGAGTGCAGTCGCTCCGGAGCTCGGGCGGGGACCGGAGCTGATCCGGAAAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
||
| CDS TCA 90 bp | CCGCAGCGAAGCGTCAGCAGATTGTGGGGCCAATTCATGAAGCCGTaGAGACCCTGGGCTTTCCGGATCAGCTCCGGTCCCCGCCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQRSVSRLWGQFMKP*RPWAFRISSGPRPS Trigger: GCTCGGGCGGGGACCGGAGCTGATCCGGAAAGCCCAGGGTCTTCACGGCTTCATGAATTGGCCCCACAATCTGCTGACGCTTCGCTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216277.2 |
||
| CDS TCA 90 bp | CCGCCGCTATCCGTCAGCAGATTGTGGGGCCAATTCATGAAGCCGTaGAGACCCTGGGCTTTCCGGATCAGCTCCGGTCCCGGCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPLSVSRLWGQFMKP*RPWAFRISSGPGLS Trigger: GCTGAGGCCGGGACCGGAGCTGATCCGGAAAGCCCAGGGTCTTCACGGCTTCATGAATTGGCCCCACAATCTGCTGACGGATAGCGGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
||
| CDS TCA 90 bp | GGGAGACCCCGCAGCGAAGCGTCAGCAGATTGTGGGGCCAATTCATaGAGCCGTGAAGACCCTGGGCTTTCCGGATCAGCTCCGGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRPRSEASADCGANS*SREDPGLSGSAPVP Trigger: GGGGACCGGAGCTGATCCGGAAAGCCCAGGGTCTTCACGGCTTCATGAATTGGCCCCACAATCTGCTGACGCTTCGCTGCGGGGTCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216277.2 |
||
| CDS CCA 90 bp | TCGGACAGGGAGAAGAGGGACACCATCTGGAAGCCGCCGCTATCCTaGGGAGACCCCGCAGCGAAGCGTCAGCAGATTGTGGGGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: SDREKRDTIWKPPLS*GDPAAKRQQIVGPI Trigger: AATTGGCCCCACAATCTGCTGACGCTTCGCTGCGGGGTCTCCCCAGGATAGCGGCGGCTTCCAGATGGTGTCCCTCTTCTCCCTGTCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216277.2 |
||
| CDS TCA 90 bp | TCTGGAAGCCGCCGCTATCCGTCAGCAGATTGTGGGGCCAATTCATaGAGCCGTGAAGACCCTGGGCTTTCCGGATCAGCTCCGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SGSRRYPSADCGANS*SREDPGLSGSAPVP Trigger: CGGGACCGGAGCTGATCCGGAAAGCCCAGGGTCTTCACGGCTTCATGAATTGGCCCCACAATCTGCTGACGGATAGCGGCGGCTTCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
||
| CDS GCA 90 bp | GTAGTGTTGTCACTGTGTAGCAGGGCATGCAGGAAGGCTCGGCTGTaGGTCTGGCAGGTGGGACAGGGACACTCAGGGTTTATGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVLSLCSRACRKARL*VWQVGQGHSGFMGL Trigger: CAGCCCCATAAACCCTGAGTGTCCCTGTCCCACCTGCCAGACGCACAGCCGAGCCTTCCTGCATGCCCTGCTACACAGTGACAACACTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002902.8 ENSMUST00000217060.2 |
||
| CDS-3UTR CAA 90 bp | CGTAGGGCGAGCGGAAGTGGACGCCCTCCTCCGTCACCTCGGACAGGGAGAAGACTATCCGTCAGCAGATaGTGGGGCCAATTCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRASGSGRPPPSPRTGRRLSVSR*WGQFMK Trigger: CTTCATGAATTGGCCCCACAATCTGCTGACGGATAG...TCTTCTCCCTGTCCGAGGTGACGGAGGAGGGCGTCCACTTCCGCTCGCCCTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216527.2 |
||
| CDS GCA 90 bp | GTTAGGTGGTGTAGTGCTGTAGTGTTGTCACTGTGTAGCAGGGCATaGAGGAAGGCTCGGCTGTGCGTCTGGCAGGTGGGACAGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: VRWCSAVVLSLCSRA*RKARLCVWQVGQGH Trigger: GTGTCCCTGTCCCACCTGCCAGACGCACAGCCGAGCCTTCCTGCATGCCCTGCTACACAGTGACAACACTACAGCACTACACCACCTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002902.8 ENSMUST00000217060.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTTATGGGCTGCGATGCATCTGTCCAGCCAGCGGACTGACCTGTGCATGCGAAGCGTCAGCAGATaGTGGGGCCAATTCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GCLWAAMHLSSQRTDLCMRSVSR*WGQFMK Trigger: CTTCATGAATTGGCCCCACAATCTGCTGACGCTTCG...CATGCACAGGTCAGTCCGCTGGCTGGACAGATGCATCGCAGCCCATAAGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216277.2 |
||
| CDS-3UTR CAA 90 bp | CTGACCTGTGCATGGCCTCCTCCACTAGAGGGCCTGTCACTGTGCTGCTCACCACTATCCGTCAGCAGATaGTGGGGCCAATTCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTCAWPPPLEGLSLCCSPLSVSR*WGQFMK Trigger: CTTCATGAATTGGCCCCACAATCTGCTGACGGATAG...TGGTGAGCAGCACAGTGACAGGCCCTCTAGTGGAGGAGGCCATGCACAGGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
||
| CDS CCA 90 bp | CCCACAGAGGCCAGTGCTTCAACGGCCCAGGCAGGACAGAGGCTGTaGTCACCATACATAGTGCGCATGAAGTTTCGTACAAAGTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: PTEASASTAQAGQRL*SPYIVRMKFRTKSG Trigger: TCCTGACTTTGTACGAAACTTCATGCGCACTATGTATGGTGACCACAGCCTCTGTCCTGCCTGGGCCGTTGAAGCACTGGCCTCTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002902.8 ENSMUST00000217060.2 |
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| CDS TCA 90 bp | GGGTTTATGGGGCTGAAATCCTTGGCATACTGCTTCTTCTTCAACTaGAGGTTCCCAGTGGGCACAAGGGCGGATCCAAAGCGCGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: GFMGLKSLAYCFFFN*RFPVGTRADPKRAV Trigger: GACAGCGCGCTTTGGATCCGCCCTTGTGCCCACTGGGAACCTTCAGTTGAAGAAGAAGCAGTATGCCAAGGATTTCAGCCCCATAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
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| CDS TCA 90 bp | TGTGCGTCTGGCAGGTGGGACAGGGACACTCAGGGTTTATGGGGCTaGAATCCTTGGCATACTGCTTCTTCTTCAACTGAAGGTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: CASGRWDRDTQGLWG*NPWHTASSSTEGSQ Trigger: CTGGGAACCTTCAGTTGAAGAAGAAGCAGTATGCCAAGGATTTCAGCCCCATAAACCCTGAGTGTCCCTGTCCCACCTGCCAGACGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002902.8 ENSMUST00000217060.2 |
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| CDS-3UTR CAA 90 bp | TCAGCATTCAGTCCACCCTGGATGATGGCAAAGAGGTTCTGCTTGTCCGGGTGCCTATCCGTCAGCAGATaGTGGGGCCAATTCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: SAFSPPWMMAKRFCLSGCLSVSR*WGQFMK Trigger: CTTCATGAATTGGCCCCACAATCTGCTGACGGATAG...GCACCCGGACAAGCAGAACCTCTTTGCCATCATCCAGGGTGGACTGAATGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
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| CDS GCA 72 bp | GCAGCCGCAGCTCACCCGCCCGAGCTCCGGAGCGACTaGACTCAGCGACCAGCCGCATTATTCGTGGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: AAAAHPPELRSD*TQRPAALFVER Trigger: CCGCTCCACGAATAATGCGGCTGGTCGCTGAGTGCAGTCGCTCCGGAGCTCGGGCGGGTGAGCTGCGGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
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| CDS GCA 72 bp | CCCACAGGCATGAACACAGGGGTGGCTACCGTTCCATaGGGCAGCCGCAGCTCACCCGCCCGAGCTCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: PTGMNTGVATVP*GSRSSPARAPE Trigger: CTCCGGAGCTCGGGCGGGTGAGCTGCGGCTGCCGCATGGAACGGTAGCCACCCCTGTGTTCATGCCTGTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
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| CDS GCA 72 bp | GCTCCGGTCCCGGCCTCAGCCCCAGATGGTAGGTGTTaGCCAAGCAGATGCGGCAGCCCAGGGAGTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: APVPASAPDGRC*PSRCGSPGSPA Trigger: AGCTGGACTCCCTGGGCTGCCGCATCTGCTTGGGCAACACCTACCATCTGGGGCTGAGGCCGGGACCGGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002902.8 ENSMUST00000216527.2 |
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| CDS GCA 72 bp | GATCAGCTCCGGTCCCCGCCCGAGCTCCGGAGCGACTaGACTCAGCGACCAGCCGCATTATTCGTGGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: DQLRSPPELRSD*TQRPAALFVER Trigger: CCGCTCCACGAATAATGCGGCTGGTCGCTGAGTGCAGTCGCTCCGGAGCTCGGGCGGGGACCGGAGCTGATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213718.2 ENSMUST00000214681.2 |
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| CDS CCA 72 bp | GGAGCGACTGCACTCAGCGACCAGCCGCATTATTCGTaGAGCGGACTCAAGCGAACCTGGGCTGCCTACCGC | + |
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Preference number: 6 (lower is better) Translates to: GATALSDQPHYS*SGLKRTWAAYR Trigger: GCGGTAGGCAGCCCAGGTTCGCTTGAGTCCGCTCCACGAATAATGCGGCTGGTCGCTGAGTGCAGTCGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002902.8 ENSMUST00000213718.2 ENSMUST00000214681.2 |
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| CDS CCA 72 bp | GAGAAGAGGGACACCATCTGGAAGCCGCCGCTATCCTaGGGAGACCCCGCAGCGAAGCGTCAGCAGATTGTG | + |
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Preference number: 6 (lower is better) Translates to: EKRDTIWKPPLS*GDPAAKRQQIV Trigger: CACAATCTGCTGACGCTTCGCTGCGGGGTCTCCCCAGGATAGCGGCGGCTTCCAGATGGTGTCCCTCTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216277.2 |
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| CDS GCA 72 bp | TCACTGTGTAGCAGGGCATGCAGGAAGGCTCGGCTGTaGGTCTGGCAGGTGGGACAGGGACACTCAGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLCSRACRKARL*VWQVGQGHSGF Trigger: AAACCCTGAGTGTCCCTGTCCCACCTGCCAGACGCACAGCCGAGCCTTCCTGCATGCCCTGCTACACAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002902.8 ENSMUST00000217060.2 |
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| CDS TCA 72 bp | TCCGTCAGCAGATTGTGGGGCCAATTCATGAAGCCGTaGAGACCCTGGGCTTTCCGGATCAGCTCCGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SVSRLWGQFMKP*RPWAFRISSGP Trigger: GGGACCGGAGCTGATCCGGAAAGCCCAGGGTCTTCACGGCTTCATGAATTGGCCCCACAATCTGCTGACGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002902.8 ENSMUST00000213718.2 ENSMUST00000214681.2 ENSMUST00000216527.2 |
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| CDS TCA 72 bp | AGCGTCAGCAGATTGTGGGGCCAATTCATGAAGCCGTaGAGACCCTGGGCTTTCCGGATCAGCTCCGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SVSRLWGQFMKP*RPWAFRISSGP Trigger: GGGACCGGAGCTGATCCGGAAAGCCCAGGGTCTTCACGGCTTCATGAATTGGCCCCACAATCTGCTGACGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216277.2 |
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| CDS CCA 72 bp | TGGGCACAAGGGCGGATCCAAAGCGCGCTGTCCGTGTaGGGTACACACAGTCGAACATGTCACATCCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: WAQGRIQSALSV*GTHSRTCHIQE Trigger: CTCTTGGATGTGACATGTTCGACTGTGTGTACCCCACACGGACAGCGCGCTTTGGATCCGCCCTTGTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
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| CDS CCA 72 bp | TGGCATACTGCTTCTTCTTCAACTGAAGGTTCCCAGTaGGCACAAGGGCGGATCCAAAGCGCGCTGTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: WHTASSSTEGSQ*AQGRIQSALSV Trigger: CACGGACAGCGCGCTTTGGATCCGCCCTTGTGCCCACTGGGAACCTTCAGTTGAAGAAGAAGCAGTATGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
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| CDS GCA 72 bp | GTACAAAGTCAGGAAAGCGCTGTTCCAAGATACTGCTaGGCACGGCACTCAGGAGCTGCAGCTGATAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: VQSQESAVPRYC*ARHSGAAADRQ Trigger: TTGCCTATCAGCTGCAGCTCCTGAGTGCCGTGCGCAGCAGTATCTTGGAACAGCGCTTTCCTGACTTTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
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| CDS GCA 72 bp | TTCGTACAAAGTCAGGAAAGCGCTGTTCCAAGATACTaGTGCGCACGGCACTCAGGAGCTGCAGCTGATAGG | + |
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Preference number: 6 (lower is better) Translates to: FVQSQESAVPRY*CARHSGAAADR Trigger: CCTATCAGCTGCAGCTCCTGAGTGCCGTGCGCAGCAGTATCTTGGAACAGCGCTTTCCTGACTTTGTACGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002902.8 |
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| CDS CAA 72 bp | ATGTTGTGCACGGTTAGGTGGTGTAGTGCTGTAGTGTaGTCACTGTGTAGCAGGGCATGCAGGAAGGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: MLCTVRWCSAVV*SLCSRACRKAR Trigger: CCGAGCCTTCCTGCATGCCCTGCTACACAGTGACAACACTACAGCACTACACCACCTAACCGTGCACAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002902.8 ENSMUST00000217060.2 |
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| CDS TCA 72 bp | GGCAGGTGGGACAGGGACACTCAGGGTTTATGGGGCTaGAATCCTTGGCATACTGCTTCTTCTTCAACTGAA | + |
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Preference number: 6 (lower is better) Translates to: GRWDRDTQGLWG*NPWHTASSSTE Trigger: TTCAGTTGAAGAAGAAGCAGTATGCCAAGGATTTCAGCCCCATAAACCCTGAGTGTCCCTGTCCCACCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002902.8 ENSMUST00000217060.2 |
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