Pregenerated sensors for QSOX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036327Ensembl transcript IDs: ENSMUST00000036187.9, ENSMUST00000091263.12
Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATCTGTGGCAGGGTGTGTGCTGTCTGTAGAGGCCTCTGTGCTTTaGCTGCTCATCTCTGGATGCTGTGCCCAGAGAGAGGGGGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: TSVAGCVLSVEASVL*LLISGCCAQREGVG Trigger: ACCCACCCCCTCTCTCTGGGCACAGCATCCAGAGATGAGCAGCCAAAGCACAGAGGCCTCTACAGACAGCACACACCCTGCCACAGATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CCA 90 bp | CTGAGCAGAAGTTCCCAGGTGCCTGCAGGGCAATCTGCCCCAGGCTaGGCACAGATGGGAGGGAAATTTGGTGAGAGGCTCAACAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: LSRSSQVPAGQSAPG*AQMGGKFGERLNSF Trigger: AAAGCTGTTGAGCCTCTCACCAAATTTCCCTCCCATCTGTGCCCAGCCTGGGGCAGATTGCCCTGCAGGCACCTGGGAACTTCTGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR TCA 90 bp | CACAGGACTCCAGGTTTCAAAGAAGAAACTTCCTCCACAGGGAAGTaGGGCAGGAGGTTCACGTGGCTGAGTCTGGCCATCTGCCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: HRTPGFKEETSSTGK*GRRFTWLSLAICPS Trigger: GCTGGGGCAGATGGCCAGACTCAGCCACGTGAACCTCCTGCCTCACTTCCCTGTGGAGGAAGTTTCTTCTTTGAAACCTGGAGTCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CCA 90 bp | ACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTaGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTA | + |
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Preference number: 1 (lower is better) Translates to: TWDCTRAAESRICPE*ASANISHARHCGVL Trigger: TAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR CCA 90 bp | GTGTGTGCTGTCTGTAGAGGCCTCTGTGCTTTGGCTGCTCATCTCTaGATGCTGTGCCCAGAGAGAGGGGGTGGGTGGGAAGGTAACAAA | + |
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Preference number: 1 (lower is better) Translates to: VCAVCRGLCALAAHL*MLCPERGGGWEGNK Trigger: TTTGTTACCTTCCCACCCACCCCCTCTCTCTGGGCACAGCATCCAGAGATGAGCAGCCAAAGCACAGAGGCCTCTACAGACAGCACACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR GCA 90 bp | GAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTaGCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGT | + |
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Preference number: 1 (lower is better) Translates to: EGMTWDCTRAAESRI*PEWASANISHARHC Trigger: ACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR CCA 90 bp | AAACAGGGATGTCCGTGGCAAGCTTGTCCCCCAGAAGGGATGACCTaGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: KQGCPWQACPPEGMT*DCTRAAESRICPEW Trigger: CCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACAAGCTTGCCACGGACATCCCTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR TCA 90 bp | AGTTCAAACAGGGATGTCCGTGGCAAGCTTGTCCCCCAGAAGGGATaGCCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: SSNRDVRGKLVPQKG*PGTVQEQLKVGSAQ Trigger: CTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACAAGCTTGCCACGGACATCCCTGTTTGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR TCA 90 bp | TCCAGAAAAGGCTCATGCATGCAAACCCACCAGCTACTGAAGAGCTaGAGGGTCCTGAGCAGAAGTTCCCAGGTGCCTGCAGGGCAATCT | + |
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Preference number: 1 (lower is better) Translates to: SRKGSCMQTHQLLKS*RVLSRSSQVPAGQS Trigger: AGATTGCCCTGCAGGCACCTGGGAACTTCTGCTCAGGACCCTTCAGCTCTTCAGTAGCTGGTGGGTTTGCATGCATGAGCCTTTTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR GCA 90 bp | GTCTGTAGAGGCCTCTGTGCTTTGGCTGCTCATCTCTGGATGCTGTaGCCAGAGAGAGGGGGTGGGTGGGAAGGTAACAAATGTAGATGT | + |
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Preference number: 1 (lower is better) Translates to: VCRGLCALAAHLWML*PERGGGWEGNKCRC Trigger: ACATCTACATTTGTTACCTTCCCACCCACCCCCTCTCTCTGGGCACAGCATCCAGAGATGAGCAGCCAAAGCACAGAGGCCTCTACAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR GCA 90 bp | ACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCTTTTCACTaGAGAATGAACAGTTCAAACAGGGATGTCCGTGGCAAGCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: TWPKDGSLEGCKPFH*RMNSSNRDVRGKLV Trigger: GACAAGCTTGCCACGGACATCCCTGTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR GCA 90 bp | ATGACAGACATGACAGGGTCTTTAGAGGCTTCCTGGAGACTGCACTaGCCCACAGAGACCAAGACTGCACTACAGCTTGACCTGGGTATT | + |
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Preference number: 1 (lower is better) Translates to: MTDMTGSLEASWRLH*PTETKTALQLDLGI Trigger: AATACCCAGGTCAAGCTGTAGTGCAGTCTTGGTCTCTGTGGGGCAGTGCAGTCTCCAGGAAGCCTCTAAAGACCCTGTCATGTCTGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CCA 90 bp | CAAGCCTTTTCACTGCAGAATGAACAGTTCAAACAGGGATGTCCGTaGCAAGCTTGTCCCCCAGAAGGGATGACCTGGGACTGTACAAGA | + |
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Preference number: 1 (lower is better) Translates to: QAFSLQNEQFKQGCP*QACPPEGMTWDCTR Trigger: TCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACAAGCTTGCCACGGACATCCCTGTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR CCA 90 bp | CACATTTGCAAAATCCCTGATCCCAACATTAAAGCTGCAGGTGTGTaGGTGGTTCAAAGCTTCCTCTGTATCGCCATGACTGCCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: HICKIPDPNIKAAGV*VVQSFLCIAMTAPG Trigger: CCCTGGGGCAGTCATGGCGATACAGAGGAAGCTTTGAACCACCCACACACCTGCAGCTTTAATGTTGGGATCAGGGATTTTGCAAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR TCA 90 bp | ATGATCAGACTTCCTTGTTCAAGTTCAGAGCACCCTGAGCCCCCATaGAAGCACTTTTGGCTTATGCAGGAACACAGCCCACATCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: MIRLPCSSSEHPEPP*KHFWLMQEHSPHLW Trigger: CCACAGATGTGGGCTGTGTTCCTGCATAAGCCAAAAGTGCTTTCATGGGGGCTCAGGGTGCTCTGAACTTGAACAAGGAAGTCTGATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR GCA 90 bp | GAATATGCAAAATGGAATGTACACACATGCACACACATGCGCACATaGGCTCTCACCACACACACACACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: EYAKWNVHTCTHMRT*ALTTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGAGAGCGCATGTGCGCATGTGTGTGCATGTGTGTACATTCCATTTTGCATATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCCACTGTGGGGTGCTATaGCAGCCCCAGGGCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: CPPEGMTWDCTRAAESRIHCGVL*QPQGHP Trigger: AGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTG...GATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCCCAGGCTGGGCACAGATGGGAGGGAAATTTGGTGAGAGGCTCAACAGCAGGATCTGCCCAGAGTaGGCTTCTGCAAACATCAGC | + |
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Preference number: 2 (lower is better) Translates to: SAPGWAQMGGKFGERLNSRICPE*ASANIS Trigger: GCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCT...GCTGTTGAGCCTCTCACCAAATTTCCCTCCCATCTGTGCCCAGCCTGGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCCCAGGCTGGGCACAGATGGGAGGGAAATTTGGTGAGAGGCTCAACAGCTTGGCTGCTCATCTCTaGATGCTGTGCCCAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SAPGWAQMGGKFGERLNSLAAHL*MLCPER Trigger: TCTCTCTGGGCACAGCATCCAGAGATGAGCAGCCAA...GCTGTTGAGCCTCTCACCAAATTTCCCTCCCATCTGTGCCCAGCCTGGGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGCCTTTTCACTGCAGAATGAACAGTTCAAACAGGGATGTCCGTGGCAAGCACTGTGGGGTGCTATaGCAGCCCCAGGGCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: CKPFHCRMNSSNRDVRGKHCGVL*QPQGHP Trigger: AGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTG...CTTGCCACGGACATCCCTGTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCCCAGAAGGGATGACCTaGGACTGTACAAGAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: AAESRICPEWASANISHAPEGMT*DCTRAA Trigger: AGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGG...GGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR-3UTR TCA 90 bp | AGGAGACAGCTGTCCATTTTCTTAAGTGGCAGCAGGGACATCGATAATACAGGGGTCCCCCAGAAGGGATaGCCTGGGACTGTACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: RRQLSIFLSGSRDIDNTGVPQKG*PGTVQE Trigger: CTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGAC...CCCTGTATTATCGATGTCCCTGCTGCCACTTAAGAAAATGGACAGCTGTCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCAAAGCTGCAGGTGTGTaGGTGGTTCAAAGCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: CPPEGMTWDCTRAAESRIKAAGV*VVQSFL Trigger: GAGGAAGCTTTGAACCACCCACACACCTGCAGCTTT...GATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR GCA 90 bp | CACTGCAGAATGAACAGTTCAAACAGGGATGTCCGTGGCAAGCTTGTCCCCCAGCATGCTGGGCACATTTaGAAAATCCCTGATCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: HCRMNSSNRDVRGKLVPQHAGHI*KIPDPN Trigger: GTTGGGATCAGGGATTTTGCAAATGTGCCCAGCATG...CTGGGGGACAAGCTTGCCACGGACATCCCTGTTTGAACTGTTCATTCTGCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR GCA 90 bp | TTAAATAGGCCCAATTCTCAAGCTGACAGACCAGGAGTGTTCATCCTTGGAAACCATCTCTGGATGCTGTaGCCAGAGAGAGGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LNRPNSQADRPGVFILGNHLWML*PERGGG Trigger: CCCACCCCCTCTCTCTGGGCACAGCATCCAGAGATG...GTTTCCAAGGATGAACACTCCTGGTCTGTCAGCTTGAGAATTGGGCCTATTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR CCA 90 bp | GATGGGTCCCTGGAGGGATGCAAGCCTTTTCACTGCAGAATGAACAGTTCAAACAGGATCTGCCCAGAGTaGGCTTCTGCAAACATCAGC | + |
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Preference number: 2 (lower is better) Translates to: DGSLEGCKPFHCRMNSSNRICPE*ASANIS Trigger: GCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCT...GTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCATCCCTCCAGGGACCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGAAAAGGCTCATGCATGCAAACCCACCAGCTACTGAAGAGCTGAAGGGTTCTTTAGAGGCTTCCTaGAGACTGCACTGCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: FQKRLMHANPPATEELKGSLEAS*RLHCPT Trigger: TGTGGGGCAGTGCAGTCTCCAGGAAGCCTCTAAAGA...ACCCTTCAGCTCTTCAGTAGCTGGTGGGTTTGCATGCATGAGCCTTTTCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAGGTAACAAATGTAGATGTGAGGCTTCATGGAAGGCTGTGTGGCTGTGGCTCCTCCAGACACCATaGTGGGCACATTTGCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: WEGNKCRCEASWKAVWLWLLQTP*WAHLQN Trigger: ATTTTGCAAATGTGCCCAGCATGGTGTCTGGAGGAG...CCACAGCCACACAGCCTTCCATGAAGCCTCACATCTACATTTGTTACCTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCTGGGCACAGATGGGAGGGAAATTTGGTGAGAGGCTCAACAGCTTTCTATGCAAGCCTTTTCACTaGAGAATGAACAGTTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: PGWAQMGGKFGERLNSFLCKPFH*RMNSSN Trigger: GTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCA...TAGAAAGCTGTTGAGCCTCTCACCAAATTTCCCTCCCATCTGTGCCCAGCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGTTTTTAAGTTACCCTCAAGGCCAGGAGACCAAGTACACAGGGGTAGCAGAGAGAGGGGGTGGGTaGGAAGGTAACAAATGTAGA | + |
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Preference number: 2 (lower is better) Translates to: LLFLSYPQGQETKYTGVAERGGG*EGNKCR Trigger: TCTACATTTGTTACCTTCCCACCCACCCCCTCTCTC...TGCTACCCCTGTGTACTTGGTCTCCTGGCCTTGAGGGTAACTTAAAAACAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CAA 90 bp | CACACACACACACACACACACACACACACACAGAGAGAGACTAGCTaGCTTTATCCAAATAAAAGGAAGCTCCTGAGCTATGGAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTQRETS*LYPNKRKLLSYGGS Trigger: AGACCCTCCATAGCTCAGGAGCTTCCTTTTATTTGGATAAAGCAAGCTAGTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR-3UTR TCA 90 bp | GGATGCAAGCCTTTTCACTGCAGAATGAACAGTTCAAACAGGGATGTCCGTGGCCTTTTCACTGCAGAATaGACAGTTCAAACAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: GCKPFHCRMNSSNRDVRGLFTAE*TVQTGM Trigger: CATCCCTGTTTGAACTGTTCATTCTGCAGTGAAAAG...GCCACGGACATCCCTGTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR CAA 90 bp | GACCAGGAGTGTTCATCCTTGGAAACACCTAACGATGATCTGGGCTaGTTTGTTTTTAAGCACAGGACTCCAGGTTTCAAAGAAGAAACT | + |
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Preference number: 2 (lower is better) Translates to: DQECSSLETPNDDLG*FVFKHRTPGFKEET Trigger: AGTTTCTTCTTTGAAACCTGGAGTCCTGTGCTTAAAAACAAACAAGCCCAGATCATCGTTAGGTGTTTCCAAGGATGAACACTCCTGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CCA 72 bp | GTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTaGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGG | + |
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Preference number: 3 (lower is better) Translates to: VGFCKHQPRQAL*GAMAAPGPPFG Trigger: CCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR GCA 72 bp | CTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTaGTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LLQTSATPGTVG*YGSPRATLRAQ Trigger: CTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR TCA 72 bp | CCTCCACAGGGAAGTGAGGCAGGAGGTTCACGTGGCTaGGTCTGGCCATCTGCCCCAGCCAAGGTCTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: PPQGSEAGGSRG*VWPSAPAKVWL Trigger: GAGCCAGACCTTGGCTGGGGCAGATGGCCAGACTCAGCCACGTGAACCTCCTGCCTCACTTCCCTGTGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CCA 72 bp | GCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATaGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATT | + |
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Preference number: 3 (lower is better) Translates to: ANISHARHCGVL*QPQGHPSGSDI Trigger: AATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR CCA 72 bp | AGTTCCCAGGTGCCTGCAGGGCAATCTGCCCCAGGCTaGGCACAGATGGGAGGGAAATTTGGTGAGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: SSQVPAGQSAPG*AQMGGKFGERL Trigger: GAGCCTCTCACCAAATTTCCCTCCCATCTGTGCCCAGCCTGGGGCAGATTGCCCTGCAGGCACCTGGGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CCA 72 bp | GTCTGTAGAGGCCTCTGTGCTTTGGCTGCTCATCTCTaGATGCTGTGCCCAGAGAGAGGGGGTGGGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: VCRGLCALAAHL*MLCPERGGGWE Trigger: TTCCCACCCACCCCCTCTCTCTGGGCACAGCATCCAGAGATGAGCAGCCAAAGCACAGAGGCCTCTACAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CCA 72 bp | TGCCTGCAGGGCAATCTGCCCCAGGCTGGGCACAGATaGGAGGGAAATTTGGTGAGAGGCTCAACAGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: CLQGNLPQAGHR*EGNLVRGSTAF Trigger: GAAAGCTGTTGAGCCTCTCACCAAATTTCCCTCCCATCTGTGCCCAGCCTGGGGCAGATTGCCCTGCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR TCA 72 bp | GGCTCATGCATGCAAACCCACCAGCTACTGAAGAGCTaGAGGGTCCTGAGCAGAAGTTCCCAGGTGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GSCMQTHQLLKS*RVLSRSSQVPA Trigger: TGCAGGCACCTGGGAACTTCTGCTCAGGACCCTTCAGCTCTTCAGTAGCTGGTGGGTTTGCATGCATGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CCA 72 bp | GGGTGGGAAGGTAACAAATGTAGATGTGAGGCTTCATaGAAGGCTGTGTGGCTGTGGGTTGGACCTGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: GWEGNKCRCEAS*KAVWLWVGPAP Trigger: GGGGGCAGGTCCAACCCACAGCCACACAGCCTTCCATGAAGCCTCACATCTACATTTGTTACCTTCCCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR TCA 72 bp | AGGGATGTCCGTGGCAAGCTTGTCCCCCAGAAGGGATaGCCTGGGACTGTACAAGAGCAGCTGAAAGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: RDVRGKLVPQKG*PGTVQEQLKVG Trigger: TCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACAAGCTTGCCACGGACATCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR GCA 72 bp | ACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTaGCCAGAGTGGGCTTCTGCAAACATCAGCCACGCC | + |
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Preference number: 3 (lower is better) Translates to: TWDCTRAAESRI*PEWASANISHA Trigger: GGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR CCA 72 bp | TGTCCGTGGCAAGCTTGTCCCCCAGAAGGGATGACCTaGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGC | + |
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Preference number: 3 (lower is better) Translates to: CPWQACPPEGMT*DCTRAAESRIC Trigger: GCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACAAGCTTGCCACGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| 3UTR TCA 72 bp | CCAGGTTTCAAAGAAGAAACTTCCTCCACAGGGAAGTaGGGCAGGAGGTTCACGTGGCTGAGTCTGGCCATC | + |
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Preference number: 3 (lower is better) Translates to: PGFKEETSSTGK*GRRFTWLSLAI Trigger: GATGGCCAGACTCAGCCACGTGAACCTCCTGCCTCACTTCCCTGTGGAGGAAGTTTCTTCTTTGAAACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR GCA 72 bp | GGCTTCATGGAAGGCTGTGTGGCTGTGGGTTGGACCTaGCCCCTTCTAGCATATAGGGCCAAATACACACTA | + |
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Preference number: 3 (lower is better) Translates to: GFMEGCVAVGWT*PLLAYRAKYTL Trigger: TAGTGTGTATTTGGCCCTATATGCTAGAAGGGGGCAGGTCCAACCCACAGCCACACAGCCTTCCATGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CCA 72 bp | TGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTaGGCTTCTGCAAACATCAGCCACGCCAGGCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: CTRAAESRICPE*ASANISHARHC Trigger: ACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| 3UTR CCA 72 bp | TCACTGCAGAATGAACAGTTCAAACAGGGATGTCCGTaGCAAGCTTGTCCCCCAGAAGGGATGACCTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SLQNEQFKQGCP*QACPPEGMTWD Trigger: GTCCCAGGTCATCCCTTCTGGGGGACAAGCTTGCCACGGACATCCCTGTTTGAACTGTTCATTCTGCAGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCCCAGGCTGGGCACAGATGGGAGGGAAATTTGGTGAGAGGCTCAACAGCATGGGAGAAAAGGGTTaGGAGAATTCCCTGAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: SAPGWAQMGGKFGERLNSMGEKG*ENSLNP Trigger: TGGATTCAGGGAATTCTCCAAACCCTTTTCTCCCAT...GCTGTTGAGCCTCTCACCAAATTTCCCTCCCATCTGTGCCCAGCCTGGGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR TCA 72 bp | CTGGTCCTCCCAGGCTCTGTGGGTTCAGAGACAATCTaGGGATGCAGGTCTCAGCATAGTCCATTCTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVLPGSVGSETI*GCRSQHSPFSL Trigger: AAGAGAGAATGGACTATGCTGAGACCTGCATCCTCAGATTGTCTCTGAACCCACAGAGCCTGGGAGGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR CCA 72 bp | TACATGACAGACATGACAGGGTCTTTAGAGGCTTCCTaGAGACTGCACTGCCCCACAGAGACCAAGACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: YMTDMTGSLEAS*RLHCPTETKTA Trigger: TGCAGTCTTGGTCTCTGTGGGGCAGTGCAGTCTCCAGGAAGCCTCTAAAGACCCTGTCATGTCTGTCATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCAAACGATGATCTGGGCTaGTTTGTTTTTAAGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: RVGFCKHQPRQALWGAMANDDLG*FVFKHR Trigger: CCTGTGCTTAAAAACAAACAAGCCCAGATCATCGTT...TGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR TCA 72 bp | CTTCCTTGTTCAAGTTCAGAGCACCCTGAGCCCCCATaGAAGCACTTTTGGCTTATGCAGGAACACAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPCSSSEHPEPP*KHFWLMQEHSP Trigger: TGGGCTGTGTTCCTGCATAAGCCAAAAGTGCTTTCATGGGGGCTCAGGGTGCTCTGAACTTGAACAAGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR CCA 72 bp | AAATTTGGTGAGAGGCTCAACAGCTTTCTAGTTGACTaGCTGGTCCTCCCAGGCTCTGTGGGTTCAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: KFGERLNSFLVD*LVLPGSVGSET Trigger: TGTCTCTGAACCCACAGAGCCTGGGAGGACCAGCCAGTCAACTAGAAAGCTGTTGAGCCTCTCACCAAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGAAAAGGCTCATGCATGCAAACCCACCAGCTACTGAAGAGCTGAAGGGTAGATGGGAGGGAAATTaGGTGAGAGGCTCAACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FQKRLMHANPPATEELKGRWEGN*VRGSTA Trigger: AGCTGTTGAGCCTCTCACCAAATTTCCCTCCCATCT...ACCCTTCAGCTCTTCAGTAGCTGGTGGGTTTGCATGCATGAGCCTTTTCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR GCA 72 bp | CCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATaGAAGCCTTTTCACTGCAGAATGAACAGTTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PYTWPKDGSLEG*KPFHCRMNSSN Trigger: GTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| 3UTR CCA 72 bp | CAGACTTTAAAACAGACCTTACACTTGGCCCAAAGATaGGTCCCTGGAGGGATGCAAGCCTTTTCACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QTLKQTLHLAQR*VPGGMQAFSLQ Trigger: CTGCAGTGAAAAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTTAAAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| 3UTR CCA 72 bp | GCCCCACAGAGACCAAGACTGCACTACAGCTTGACCTaGGTATTTAAGACGCAGGGAAGCTACAACATAACT | + |
|
Preference number: 3 (lower is better) Translates to: APQRPRLHYSLT*VFKTQGSYNIT Trigger: AGTTATGTTGTAGCTTCCCTGCGTCTTAAATACCCAGGTCAAGCTGTAGTGCAGTCTTGGTCTCTGTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAACAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCATGATCTGGGCTTGTTaGTTTTTAAGCACAGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: LKQTLHLAQRWVPGGMQAMIWAC*FLSTGL Trigger: GAGTCCTGTGCTTAAAAACAAACAAGCCCAGATCAT...GGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTAAATGGTACCCATGTGACCAACTGTCATTGGGAAGGATGCAAATATAAAATGTCCGTGGCAAGCTaGTCCCCCAGAAGGGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: VLNGTHVTNCHWEGCKYKMSVAS*SPRRDD Trigger: GTCATCCCTTCTGGGGGACAAGCTTGCCACGGACAT...TTTATATTTGCATCCTTCCCAATGACAGTTGGTCACATGGGTACCATTTAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR CCA 72 bp | AAAATCCCTGATCCCAACATTAAAGCTGCAGGTGTGTaGGTGGTTCAAAGCTTCCTCTGTATCGCCATGACT | + |
|
Preference number: 3 (lower is better) Translates to: KIPDPNIKAAGV*VVQSFLCIAMT Trigger: AGTCATGGCGATACAGAGGAAGCTTTGAACCACCCACACACCTGCAGCTTTAATGTTGGGATCAGGGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR TCA 72 bp | CAAATACACACTAGTCTAACATGGAGGCTGGGAAGGTaGGGACAAGGTAACAGCAAGGCAAAAATGTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: QIHTSLTWRLGR*GQGNSKAKMFH Trigger: ATGGAACATTTTTGCCTTGCTGTTACCTTGTCCTCACCTTCCCAGCCTCCATGTTAGACTAGTGTGTATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR CCA 72 bp | AGGAGTGTTCATCCTTGGAAACACCTAACGATGATCTaGGCTTGTTTGTTTTTAAGCACAGGACTCCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RSVHPWKHLTMI*ACLFLSTGLQV Trigger: AACCTGGAGTCCTGTGCTTAAAAACAAACAAGCCCAGATCATCGTTAGGTGTTTCCAAGGATGAACACTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| 3UTR TCA 72 bp | CAAACTAGATGGGAGAAAAGGGTTTGGAGAATTCCCTaGATCCAGCTTTACATAAAGCTGCTCACATTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QTRWEKRVWRIP*IQLYIKLLTFQ Trigger: TTGAAATGTGAGCAGCTTTATGTAAAGCTGGATTCAGGGAATTCTCCAAACCCTTTTCTCCCATCTAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS-3UTR TCA 90 bp | TGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACAACCACACGGCGTCTaGGCCCTCGCGGTAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CKHQPRQALWGAMAAPGPQPHGV*ALAVEP Trigger: CGGCTCTACCGCGAGGGCTCAGACGCCGTGTGGTTG...TGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR TCA 90 bp | ACGCCAGGCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGTCTCCAACAGCTTCTTaGCTGCAGGCCGGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPGTVGCYGSPRATLRAQSPTAS*LQAGQG Trigger: TCCCTGGCCGGCCTGCAGTCAAGAAGCTGTTGGAGA...CTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | CACGCCAGGCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGGCTGGGCAGAGGTCTaGAGTGGGCCATGGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: HARHCGVLWQPQGHPSGSGWAEV*SGPWNL Trigger: AAGGTTCCATGGCCCACTCCAGACCTCTGCCCAGCC...TGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | GCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATCTGAGCTGTTGCCCGTaGCCGACCGCACGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AQSGLLQTSATPGTVGCYLSCCP*PTARCR Trigger: GCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAG...ATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR CCA 90 bp | CACGCCAGGCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGGCAGAGGTCTGGAGTaGGCCATGGAACCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HARHCGVLWQPQGHPSGSGRGLE*AMEPLE Trigger: TTCCAAAGGTTCCATGGCCCACTCCAGACCTCTGCC...TGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTCACGACGAGTGGAACTaGACCAGCCACGCGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPRVGFCKHQPRQALWGAHDEWN*TSHAAE Trigger: CTCAGCCGCGTGGCTGGTGCAGTTCCACTCGTCGTG...AGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATCCGCACCACGACGAGTaGAACTGCACCAGCCACGCG | + |
|
Preference number: 4 (lower is better) Translates to: AQSGLLQTSATPGTVGCYPHHDE*NCTSHA Trigger: CGCGTGGCTGGTGCAGTTCCACTCGTCGTGGTGCGG...ATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR CCA 90 bp | GCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATCCAGCGCTCGCCAGGTaGGTGCGTAGCCGATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AQSGLLQTSATPGTVGCYPALAR*VRSRCS Trigger: ACTGCATCGGCTACGCACCCACCTGGCGAGCGCTGG...ATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR TCA 90 bp | TGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACGATCATTGTCTGCCTaGCTGTCCGCAGCTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CKHQPRQALWGAMAAPGPRSLSA*LSAAPC Trigger: ACAGGGAGCTGCGGACAGTCAGGCAGACAATGATCG...TGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR GCA 90 bp | GCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATTTCGGCCTTCAAAGCCTGTaGCAGCCAGCGCTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALWGAMAAPGPPFGLRHFGLQSL*QPALLD Trigger: ATCCAGAAGCGCTGGCTGGCACAGGCTTTGAAGGCC...GAAATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | GCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATTTCTATCTCCTGATGGCCTaGAACACAGCCTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALWGAMAAPGPPFGLRHFYLLMA*NTAWGW Trigger: CCACCCCCAGGCTGTGTTGCAGGCCATCAGGAGATA...GAAATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | CACGCCAGGCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCACCACCAGGTTGTCCCTaGTATAGTGCTGTTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HARHCGVLWQPQGHPSGSPPGCP*YSAVSG Trigger: TCCTGAAACAGCACTATAGCAGGGACAACCTGGTGG...TGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCAGCCCGAGCAGCAACACGGATaGCAGCAGCCCAGTCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: WASANISHARHCGVLWQPEQQHG*QQPSLA Trigger: TGCGAGACTGGGCTGCTGCCATCCGTGTTGCTGCTC...GGGCTGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTGCCTGCAACACAGCCTaGGGGTGGCCTTCAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPRVGFCKHQPRQALWGAACNTA*GWPSKP Trigger: AGGCTTTGAAGGCCACCCCCAGGCTGTGTTGCAGGC...AGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCTGGCCGACCGCACGCTaGCGCTGTCCAGCAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: AAESRICPEWASANISHAWPTAR*RCPATT Trigger: TGTGGTTGCTGGACAGCGGCAGCGTGCGGTCGGCCA...GGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGTGTCCAGGGGGAGGTTaGCCAACCACTCCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ICPEWASANISHARHCGVCPGGG*PTTPAV Trigger: CACTGCAGGAGTGGTTGGCCAACCTCCCCCTGGACA...CACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGTGTCCAGGGGGAGGTTaGCCAACCACTCCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRVGFCKHQPRQALWGAMCPGGG*PTTPAV Trigger: CACTGCAGGAGTGGTTGGCCAACCTCCCCCTGGACA...CATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGTTCCTCATGGCAGGCTaGGCAGAGGTCTGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRVGFCKHQPRQALWGAMFLMAG*AEVWSG Trigger: CCCACTCCAGACCTCTGCCCAGCCTGCCATGAGGAA...CATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR TCA 90 bp | GCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATTTCTGCGAATGTATCTCCTaGTGGCCTGCAACACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALWGAMAAPGPPFGLRHFCECIS*WPATQP Trigger: AGGCTGTGTTGCAGGCCATCAGGAGATACATTCGCA...GAAATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | CCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCAACAGCTTCTTGACTaGAGGCCGGCCAGGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PEWASANISHARHCGVLWQQLLD*RPAREQ Trigger: CTGTTCCCTGGCCGGCCTGCAGTCAAGAAGCTGTTG...CCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | ATGTCCGTGGCAAGCTTGTCCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCCTTGGCCTCCTTAAGTaGCTGGGGCCCCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSVASLSPRRDDLGLYKSLGLLK*LGPLRA Trigger: AGCCCTCAGGGGCCCCAGGCACTTAAGGAGGCCAAG...GCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACAAGCTTGCCACGGACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | GCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATTTCACTGGAGCTGTCGGCAGAGGTCTGGAGTaGGCCATGGAACCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AMAAPGPPFGLRHFTGAVGRGLE*AMEPLE Trigger: TTCCAAAGGTTCCATGGCCCACTCCAGACCTCTGCC...GACAGCTCCAGTGAAATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | GCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATACCCAGGATATGGGGTaGACGGAGACTCCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQSGLLQTSATPGTVGCYTQDMG*TETPSV Trigger: GACACTGGGAGTCTCCGTCCACCCCATATCCTGGGT...ATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS-3UTR TCA 90 bp | GATGGGTCCCTGGAGGGATGCAAGCCTTTTCACTGCAGAATGAACAGTTCAAACCACCAGCCACGCGGCTaGGCTGTTGCCCGTGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DGSLEGCKPFHCRMNSSNHQPRG*AVARGR Trigger: TCGGCCACGGGCAACAGCTCAGCCGCGTGGCTGGTG...GTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCATCCCTCCAGGGACCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCAGCCTTGGCCAACCACTCCTaGAGTGTCTCCAACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGFCKHQPRQALWGAMAALANHS*SVSNSF Trigger: GAAGCTGTTGGAGACACTGCAGGAGTGGTTGGCCAA...GGCTGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | ACGCCAGGCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGGTTCACCACATTCTTTaGACCCAAAGAATGTGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPGTVGCYGSPRATLRAQVHHIL*TQRMCE Trigger: TTCGCACATTCTTTGGGTGCAAAGAATGTGGTGAAC...CTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTTTCCAGAGGGAGCATaGGTAGCCCCTCAACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAQSGLLQTSATPGTVGCFPEGA*VAPQLQ Trigger: TTGGAGTTGAGGGGCTACCCATGCTCCCTCTGGAAA...GCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCAGCGCTTCTGGATGGGTaGAGGCCTGAACCGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVGFCKHQPRQALWGAMAALLDG*RPEPSK Trigger: CTTTGACGGTTCAGGCCTCCACCCATCCAGAAGCGC...TGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR TCA 90 bp | CCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGTGCGAATGTATCTCCTaGTGGCCTGCAACACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEWASANISHARHCGVLWCECIS*WPATQP Trigger: AGGCTGTGTTGCAGGCCATCAGGAGATACATTCGCA...CCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | ACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACACGCTCGCCAGGTGGGTaGGTAGCCGATGCAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVQEQLKVGSAQSGLLQTRSPGG*VADAVA Trigger: GGCCACTGCATCGGCTACGCACCCACCTGGCGAGCG...TGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGCTCACTCAAATGGCCTaGCAGGCGGCTGTTTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRVGFCKHQPRQALWGAMLTQMA*QAAVYH Trigger: ATGGTAAACAGCCGCCTGGCAGGCCATTTGAGTGAG...CATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | GCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATTTCACTGGAGCTGTCCCACCAGGTTGTCCCTaGTATAGTGCTGTTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AMAAPGPPFGLRHFTGAVPPGCP*YSAVSG Trigger: TCCTGAAACAGCACTATAGCAGGGACAACCTGGTGG...GACAGCTCCAGTGAAATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CCA 90 bp | CTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTGTGCGGCACACATCCTaGTTCTTTTCTTCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPRVGFCKHQPRQALWGAVRHTS*FFSSAQ Trigger: CTGTGCAGAAGAAAAGAACCAGGATGTGTGCCGCAC...AGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS-3UTR CCA 90 bp | GCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATTTCTGGTATTGGCCACTGTaGCTATCCATGAAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALWGAMAAPGPPFGLRHFWYWPL*LSMKER Trigger: CCTTTCCTTCATGGATAGCCACAGTGGCCAATACCA...GAAATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCGCGCTTCTGGATGGGTaGAGGCCTGAACCGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAESRICPEWASANISHAALLDG*RPEPSK Trigger: CTTTGACGGTTCAGGCCTCCACCCATCCAGAAGCGC...GGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | GCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGTCTGGAGTGGGCCATaGAACCTTTGGAAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQSGLLQTSATPGTVGCYVWSGP*NLWKLG Trigger: CCCAAGTTTCCAAAGGTTCCATGGCCCACTCCAGAC...ATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCCAGGCTGGGCACAGATGGGAGGGAAATTTGGTGAGAGGCTCAACAGCAGGAACAGAAGCACCTaGCCCTCATTCCAGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAPGWAQMGGKFGERLNSRNRST*PSFQLS Trigger: GGACAGCTGGAATGAGGGCCAGGTGCTTCTGTTCCT...GCTGTTGAGCCTCTCACCAAATTTCCCTCCCATCTGTGCCCAGCCTGGGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | ACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACATGGGTGCGTAGCCGATaGAGTGGCCGCACCACGACG | + |
|
Preference number: 4 (lower is better) Translates to: TVQEQLKVGSAQSGLLQTWVRSR*SGRTTT Trigger: CGTCGTGGTGCGGCCACTGCATCGGCTACGCACCCA...TGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS-3UTR CCA 90 bp | CAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCTTTTCAAATAGGGTCCAGGGGTaGGCATGCAGGAGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTLHLAQRWVPGGMQAFSNRVQG*ACRRPG Trigger: ACCTGGCCTCCTGCATGCCCACCCCTGGACCCTATT...TGAAAAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGGGCACAGATGGGAGGGAAATTTGGTGAGAGGCTCAACAGCTTTCTAAATAGGGTCCAGGGGTaGGCATGCAGGAGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGWAQMGGKFGERLNSFLNRVQG*ACRRPG Trigger: ACCTGGCCTCCTGCATGCCCACCCCTGGACCCTATT...TAGAAAGCTGTTGAGCCTCTCACCAAATTTCCCTCCCATCTGTGCCCAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR CCA 90 bp | TGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCAGCCCCAGGGCCAAGCCAGAGAACAGCTTaGTCTGGAGTTTTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CKHQPRQALWGAMAAPGPSQRTA*SGVFTE Trigger: TTCTGTGAAAACTCCAGACCAAGCTGTTCTCTGGCT...TGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCGATCCAGGACTGCCCTaGTCCACAGAGTATGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPEGMTWDCTRAAESRICDPGLP*STEYAS Trigger: GGACGCATACTCTGTGGACCAGGGCAGTCCTGGATC...GCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS-3UTR TCA 90 bp | AAAACAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCTTTCTCCAACAGCTTCTTaGCTGCAGGCCGGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTDLTLGPKMGPWRDASLSPTAS*LQAGQG Trigger: TCCCTGGCCGGCCTGCAGTCAAGAAGCTGTTGGAGA...AAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR TCA 90 bp | AAAACAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCTTTCCTCCACAGGGAAGTaGGGCAGGAGGTTCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTDLTLGPKMGPWRDASLSSTGK*GRRFTW Trigger: CCACGTGAACCTCCTGCCTCACTTCCCTGTGGAGGA...AAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS-3UTR GCA 90 bp | CCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCACAACAGCTTCTTGACTaGAGGCCGGCCAGGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PEGMTWDCTRAAESRICPQQLLD*RPAREQ Trigger: CTGTTCCCTGGCCGGCCTGCAGTCAAGAAGCTGTTG...TGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCTTGGCCAACCACTCCTaGAGTGTCTCCAACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAESRICPEWASANISHALANHS*SVSNSF Trigger: GAAGCTGTTGGAGACACTGCAGGAGTGGTTGGCCAA...GGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR GCA 90 bp | GCGCACATGCGCTCTCACCACACACACACACACACACACACACACACACACACACCTTTGCCTTCTTCTTaGTCTCTGCCCTGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHMRSHHTHTHTHTHTHTPLPSS*SLPWAS Trigger: GGAAGCCCAGGGCAGAGAGCAAGAAGAAGGCAAAGG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGAGAGCGCATGTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | GTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCAGCCCTGCAGTATACAGCTTaGCCCTGTCAAATTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGFCKHQPRQALWGAMAALQYTA*PCQILS Trigger: GGAAAGAATTTGACAGGGCCAAGCTGTATACTGCAG...GGCTGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CCA 90 bp | CCAGGCTGGGCACAGATGGGAGGGAAATTTGGTGAGAGGCTCAACAGCTTTCTATCACCAGGACTGCCCTaGTCCACAGAGTATGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGWAQMGGKFGERLNSFLSPGLP*STEYAS Trigger: GGACGCATACTCTGTGGACCAGGGCAGTCCTGGTGA...TAGAAAGCTGTTGAGCCTCTCACCAAATTTCCCTCCCATCTGTGCCCAGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR CCA 90 bp | ACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTTCTTGCTCTCTGCCCTaGGCTTCCCACTCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWDCTRAAESRICPEWASSCSLP*ASHSPG Trigger: TCCTGGTGAGTGGGAAGCCCAGGGCAGAGAGCAAGA...AGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR TCA 90 bp | GCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGTGCTCGGCTCACCATaGTGTTTTCATATGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: AQSGLLQTSATPGTVGCYVLGSP*CFHMES Trigger: TGATTCCATATGAAAACATCATGGTGAGCCGAGCAC...ATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR TCA 90 bp | ATGTCCGTGGCAAGCTTGTCCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCGTAACAGGAAGGCACTaGAGTAATGCCAAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MSVASLSPRRDDLGLYKSVTGRH*SNAKCP Trigger: GGGACACTTGGCATTACTTCAGTGCCTTCCTGTTAC...GCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACAAGCTTGCCACGGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CCA 90 bp | ACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACAGGCTGGGCAGAGGTCTaGAGTGGGCCATGGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVQEQLKVGSAQSGLLQTGWAEV*SGPWNL Trigger: AAGGTTCCATGGCCCACTCCAGACCTCTGCCCAGCC...TGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR TCA 90 bp | GAGCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCACTGTGGCTATCCATaGAGGAAAGGATGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQLKVGSAQSGLLQTSATHCGYP*RKGCHW Trigger: CCAGTGACATCCTTTCCTTCATGGATAGCCACAGTG...CGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR TCA 90 bp | GCGCACATGCGCTCTCACCACACACACACACACACACACACACACACACACACAGTAACAGGAAGGCACTaGAGTAATGCCAAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHMRSHHTHTHTHTHTHTVTGRH*SNAKCP Trigger: GGGACACTTGGCATTACTTCAGTGCCTTCCTGTTAC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGAGAGCGCATGTGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR TCA 90 bp | TCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTTCAGGCAAGAAAAGTaGCTTTTTCCTTACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAQSGLLQTSATPGTVGCFRQEK*LFPYIW Trigger: CCAGATGTAAGGAAAAAGTCACTTTTCTTGCCTGAA...GCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR TCA 90 bp | TTAAAACAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCCTTAGGTCCAGCCTGTaGTGCAGGCTCTTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQTLHLAQRWVPGGMQALRSSL*CRLLER Trigger: CCTTTCCAAGAGCCTGCATCACAGGCTGGACCTAAG...GGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR GCA 90 bp | TTCCAGAAAAGGCTCATGCATGCAAACCCACCAGCTACTGAAGAGCTGAAGGGTGGCCTTCAAAGCCTGTaGCAGCCAGCGCTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FQKRLMHANPPATEELKGGLQSL*QPALLD Trigger: ATCCAGAAGCGCTGGCTGGCACAGGCTTTGAAGGCC...ACCCTTCAGCTCTTCAGTAGCTGGTGGGTTTGCATGCATGAGCCTTTTCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | CCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCTGTTTACCATGTTGTaGTTTCTCCAAAGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PEWASANISHARHCGVLWLFTML*FLQSQR Trigger: TCTCTGGCTTTGGAGAAAGCACAACATGGTAAACAG...CCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CCA 90 bp | CAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCTTTTCATTTCCAGAGGGAGCATaGGTAGCCCCTCAACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTLHLAQRWVPGGMQAFSFPEGA*VAPQLQ Trigger: TTGGAGTTGAGGGGCTACCCATGCTCCCTCTGGAAA...TGAAAAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | AGGAGACAGCTGTCCATTTTCTTAAGTGGCAGCAGGGACATCGATAATACAGGGTTCCTCATGGCAGGCTaGGCAGAGGTCTGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRQLSIFLSGSRDIDNTGFLMAG*AEVWSG Trigger: CCCACTCCAGACCTCTGCCCAGCCTGCCATGAGGAA...CCCTGTATTATCGATGTCCCTGCTGCCACTTAAGAAAATGGACAGCTGTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | AAAACAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCTTAGGAACAGAAGCACCTaGCCCTCATTCCAGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTDLTLGPKMGPWRDASLRNRST*PSFQLS Trigger: GGACAGCTGGAATGAGGGCCAGGTGCTTCTGTTCCT...AAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR TCA 90 bp | ACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTCACTGTGGCTATCCATaGAGGAAAGGATGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWDCTRAAESRICPEWASHCGYP*RKGCHW Trigger: CCAGTGACATCCTTTCCTTCATGGATAGCCACAGTG...AGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR TCA 90 bp | CTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTGGTAAGGATTTTAAATaGGAGGAGAAAAACGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRVGFCKHQPRQALWGAGKDFK*EEKNDR Trigger: ACGATCGTTTTTCTCCTCTCATTTAAAATCCTTACC...AGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | GCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATTTCAAGATTCCAGAAATCTaGATTTTGTTGTTGACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALWGAMAAPGPPFGLRHFKIPEI*ILLLTR Trigger: CCTAGTCAACAACAAAATGCAGATTTCTGGAATCTT...GAAATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | AAAACAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCTTCTCACTCAAATGGCCTaGCAGGCGGCTGTTTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KTDLTLGPKMGPWRDASLLTQMA*QAAVYH Trigger: ATGGTAAACAGCCGCCTGGCAGGCCATTTGAGTGAG...AAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | AAAACAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCTTGTCTGGAGTGGGCCATaGAACCTTTGGAAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTDLTLGPKMGPWRDASLVWSGP*NLWKLG Trigger: CCCAAGTTTCCAAAGGTTCCATGGCCCACTCCAGAC...AAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR GCA 90 bp | CTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTAAGATTCCAGAAATCTaGATTTTGTTGTTGACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRVGFCKHQPRQALWGAKIPEI*ILLLTR Trigger: CCTAGTCAACAACAAAATGCAGATTTCTGGAATCTT...AGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCATGGTATTGGCCACTGTaGCTATCCATGAAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEGMTWDCTRAAESRICPWYWPL*LSMKER Trigger: CCTTTCCTTCATGGATAGCCACAGTGGCCAATACCA...TGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CCA 90 bp | AGGAGACAGCTGTCCATTTTCTTAAGTGGCAGCAGGGACATCGATAATACAGGGGGCTCATGTCCAGACTaGAGAAGCCAACCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRQLSIFLSGSRDIDNTGGSCPD*RSQPQG Trigger: TCCTTGGGGTTGGCTTCTCCAGTCTGGACATGAGCC...CCCTGTATTATCGATGTCCCTGCTGCCACTTAAGAAAATGGACAGCTGTCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAAACCACCACCTCTaGTTTTTCTTCTTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EQLKVGSAQSGLLQTSATPNHHL*FFFFVG Trigger: TCCAACAAAGAAGAAAAATCAGAGGTGGTGGTTTGG...CGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR TCA 90 bp | GGATGCAAGCCTTTTCACTGCAGAATGAACAGTTCAAACAGGGATGTCCGTGGCGCCCAATTCTCAAGCTaGCAGACCAGGAGTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GCKPFHCRMNSSNRDVRGAQFSS*QTRSVH Trigger: ATGAACACTCCTGGTCTGTCAGCTTGAGAATTGGGC...GCCACGGACATCCCTGTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS-3UTR TCA 90 bp | TTAAAACAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCGTGCTCGGCTCACCATaGTGTTTTCATATGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LKQTLHLAQRWVPGGMQAVLGSP*CFHMES Trigger: TGATTCCATATGAAAACATCATGGTGAGCCGAGCAC...GGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR GCA 90 bp | GGATGCAAGCCTTTTCACTGCAGAATGAACAGTTCAAACAGGGATGTCCGTGGCCTGGTTCTTTTCTTCTaGACAGTCCAGAGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GCKPFHCRMNSSNRDVRGLVLFF*TVQSSN Trigger: GTTGCTGCTCTGGACTGTGCAGAAGAAAAGAACCAG...GCCACGGACATCCCTGTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS-3UTR TCA 90 bp | CCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCGGTAAGGATTTTAAATaGGAGGAGAAAAACGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: PPEGMTWDCTRAAESRICGKDFK*EEKNDR Trigger: ACGATCGTTTTTCTCCTCTCATTTAAAATCCTTACC...GCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR TCA 90 bp | TGTCCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTTCAGGCAAGAAAAGTaGCTTTTTCCTTACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPPEGMTWDCTRAAESRIFRQEK*LFPYIW Trigger: CCAGATGTAAGGAAAAAGTCACTTTTCTTGCCTGAA...GATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR GCA 90 bp | TGCAAGCCTTTTCACTGCAGAATGAACAGTTCAAACAGGGATGTCCGTGGCAAGAGTGGATGTCATATGTaGGGCACACATCCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CKPFHCRMNSSNRDVRGKSGCHM*GTHPGS Trigger: AGAACCAGGATGTGTGCCGCACATATGACATCCACT...CTTGCCACGGACATCCCTGTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS-3UTR GCA 90 bp | AAAACAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCTTGTTCACCACATTCTTTaGACCCAAAGAATGTGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTDLTLGPKMGPWRDASLVHHIL*TQRMCE Trigger: TTCGCACATTCTTTGGGTGCAAAGAATGTGGTGAAC...AAGGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CCA 90 bp | GTCTTAAATGGTACCCATGTGACCAACTGTCATTGGGAAGGATGCAAATATAAAGCCTGCAACACAGCCTaGGGGTGGCCTTCAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLNGTHVTNCHWEGCKYKACNTA*GWPSKP Trigger: AGGCTTTGAAGGCCACCCCCAGGCTGTGTTGCAGGC...TTTATATTTGCATCCTTCCCAATGACAGTTGGTCACATGGGTACCATTTAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR CCA 90 bp | TGTCCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCCACCTAACGATGATCTaGGCTTGTTTGTTTTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPPEGMTWDCTRAAESRIHLTMI*ACLFLS Trigger: GCTTAAAAACAAACAAGCCCAGATCATCGTTAGGTG...GATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| 3UTR CAA 72 bp | CTCATAAAACTTCAGACTTTAAAACAGACCTTACACTaGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIKLQTLKQTLH*AQRWVPGGMQA Trigger: GGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTTAAAGTCTGAAGTTTTATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR TCA 90 bp | AGGAGACAGCTGTCCATTTTCTTAAGTGGCAGCAGGGACATCGATAATACAGGGCCAAACCACCACCTCTaGTTTTTCTTCTTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRQLSIFLSGSRDIDNTGPNHHL*FFFFVG Trigger: TCCAACAAAGAAGAAAAATCAGAGGTGGTGGTTTGG...CCCTGTATTATCGATGTCCCTGCTGCCACTTAAGAAAATGGACAGCTGTCTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR CCA 90 bp | TTGTTGTTTTTAAGTTACCCTCAAGGCCAGGAGACCAAGTACACAGGGGTAGCACTGCAGTATACAGCTTaGCCCTGTCAAATTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLFLSYPQGQETKYTGVALQYTA*PCQILS Trigger: GGAAAGAATTTGACAGGGCCAAGCTGTATACTGCAG...TGCTACCCCTGTGTACTTGGTCTCCTGGCCTTGAGGGTAACTTAAAAACAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR CCA 90 bp | TTGTTGTTTTTAAGTTACCCTCAAGGCCAGGAGACCAAGTACACAGGGGTAGCAAGCCAGAGAACAGCTTaGTCTGGAGTTTTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLFLSYPQGQETKYTGVASQRTA*SGVFTE Trigger: TTCTGTGAAAACTCCAGACCAAGCTGTTCTCTGGCT...TGCTACCCCTGTGTACTTGGTCTCCTGGCCTTGAGGGTAACTTAAAAACAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CAA 72 bp | CCAATTCTCAAGCTGACAGACCAGGAGTGTTCATCCTaGGAAACACCTAACGATGATCTGGGCTTGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PILKLTDQECSS*ETPNDDLGLFV Trigger: AACAAACAAGCCCAGATCATCGTTAGGTGTTTCCAAGGATGAACACTCCTGGTCTGTCAGCTTGAGAATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR GCA 90 bp | TTAAATAGGCCCAATTCTCAAGCTGACAGACCAGGAGTGTTCATCCTTGGAAACCTGTTTACCATGTTGTaGTTTCTCCAAAGCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNRPNSQADRPGVFILGNLFTML*FLQSQR Trigger: TCTCTGGCTTTGGAGAAAGCACAACATGGTAAACAG...GTTTCCAAGGATGAACACTCCTGGTCTGTCAGCTTGAGAATTGGGCCTATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CAA 72 bp | CATCCTTGGAAACACCTAACGATGATCTGGGCTTGTTaGTTTTTAAGCACAGGACTCCAGGTTTCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HPWKHLTMIWAC*FLSTGLQVSKK Trigger: CTTCTTTGAAACCTGGAGTCCTGTGCTTAAAAACAAACAAGCCCAGATCATCGTTAGGTGTTTCCAAGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| 3UTR CAA 72 bp | TGTTCATCCTTGGAAACACCTAACGATGATCTGGGCTaGTTTGTTTTTAAGCACAGGACTCCAGGTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSSLETPNDDLG*FVFKHRTPGFK Trigger: TTTGAAACCTGGAGTCCTGTGCTTAAAAACAAACAAGCCCAGATCATCGTTAGGTGTTTCCAAGGATGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS CCA 90 bp | CAGCAGGAAGAGCAGCCGCGGCAGCCGCGCGGCTCGAAGAGACGGTaGCTGCCGCGCATAAGCTCCTGGATCCCGCGCCACAGCCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QQEEQPRQPRGSKRR*LPRISSWIPRHSPG Trigger: GCCCGGGCTGTGGCGCGGGATCCAGGAGCTTATGCGCGGCAGCCACCGTCTCTTCGAGCCGCGCGGCTGCCGCGGCTGCTCTTCCTGCTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS GCA 90 bp | GCACCAGCCACGCGGCTGAGCTGTTGCCCGTGGCCGACCGCACGCTaGCGCTGTCCAGCAACCACACGGCGTCTGAGCCCTCGCGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: APATRLSCCPWPTAR*RCPATTRRLSPRGR Trigger: TCTACCGCGAGGGCTCAGACGCCGTGTGGTTGCTGGACAGCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAGCCGCGTGGCTGGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS TCA 90 bp | GCAGTGGCCGCACCACGACGAGTGGAACTGCACCAGCCACGCGGCTaGGCTGTTGCCCGTGGCCGACCGCACGCTGCCGCTGTCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AVAAPRRVELHQPRG*AVARGRPHAAAVQQ Trigger: TTGCTGGACAGCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAGCCGCGTGGCTGGTGCAGTTCCACTCGTCGTGGTGCGGCCACTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS GCA 90 bp | CGCACCACGACGAGTGGAACTGCACCAGCCACGCGGCTGAGCTGTTaGCCGTGGCCGACCGCACGCTGCCGCTGTCCAGCAACCACACGG | + |
|
Preference number: 5 (lower is better) Translates to: RTTTSGTAPATRLSC*PWPTARCRCPATTR Trigger: CCGTGTGGTTGCTGGACAGCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAGCCGCGTGGCTGGTGCAGTTCCACTCGTCGTGGTGCG 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS CCA 90 bp | ACGACGAGTGGAACTGCACCAGCCACGCGGCTGAGCTGTTGCCCGTaGCCGACCGCACGCTGCCGCTGTCCAGCAACCACACGGCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TTSGTAPATRLSCCP*PTARCRCPATTRRL Trigger: CAGACGCCGTGTGGTTGCTGGACAGCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAGCCGCGTGGCTGGTGCAGTTCCACTCGTCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTTTGTCCAGGGGGAGGTaGGCCAACCACTCCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPRVGFCKHQPRQALWGALSRGR*ANHSCS Trigger: ACTGCAGGAGTGGTTGGCCAACCTCCCCCTGGACAA...AGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS TCA 90 bp | GGGGGAGGTTGGCCAACCACTCCTGCAGTGTCTCCAACAGCTTCTTaGCTGCAGGCCGGCCAGGGAACAGCTTGGCAACGACAGTCACGA | + |
|
Preference number: 5 (lower is better) Translates to: GGGWPTTPAVSPTAS*LQAGQGTAWQRQSR Trigger: TCGTGACTGTCGTTGCCAAGCTGTTCCCTGGCCGGCCTGCAGTCAAGAAGCTGTTGGAGACACTGCAGGAGTGGTTGGCCAACCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CCA 90 bp | AGGAGGAGGCCACGTAGAGCACCACGCAGAGGCTCATGTCCAGACTaGAGAAGCCAACCCCAAGGAAGGGCACAACTGCCTTGGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRPRRAPRRGSCPD*RSQPQGRAQLPWPP Trigger: AGGAGGCCAAGGCAGTTGTGCCCTTCCTTGGGGTTGGCTTCTCCAGTCTGGACATGAGCCTCTGCGTGGTGCTCTACGTGGCCTCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | GCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATTTCTGGGCCATGGAACCTTaGGAAACTTGGGGTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALWGAMAAPGPPFGLRHFWAMEP*ETWGPH Trigger: GTGAGGACCCCAAGTTTCCAAAGGTTCCATGGCCCA...GAAATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CCA 90 bp | ATAGGGTCCAGGGGTGGGCATGCAGGAGGCCAGGTGCCCTCAGTATaGTTCTGCAGGAAGTCGATCATTGTCTGCCTGACTGTCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IGSRGGHAGGQVPSV*FCRKSIIVCLTVRS Trigger: GCTGCGGACAGTCAGGCAGACAATGATCGACTTCCTGCAGAACCATACTGAGGGCACCTGGCCTCCTGCATGCCCACCCCTGGACCCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS-3UTR CAA 90 bp | CACGCCAGGCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCATGTTCACCACATTCTTaGCACCCAAAGAATGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: HARHCGVLWQPQGHPSGSCSPHS*HPKNVR Trigger: TCGCACATTCTTTGGGTGCAAAGAATGTGGTGAACA...TGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGCCTGGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS GCA 90 bp | GAGGTTGGCCAACCACTCCTGCAGTGTCTCCAACAGCTTCTTGACTaGAGGCCGGCCAGGGAACAGCTTGGCAACGACAGTCACGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EVGQPLLQCLQQLLD*RPAREQLGNDSHEV Trigger: GACTTCGTGACTGTCGTTGCCAAGCTGTTCCCTGGCCGGCCTGCAGTCAAGAAGCTGTTGGAGACACTGCAGGAGTGGTTGGCCAACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS GCA 90 bp | GCCCTGGGCTTCCCACTCACCAGGACTGCCCTGGTCCACAGAGTATaGGTCCACCAGGTTGTCCCTGCTATAGTGCTGTTTCAGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: ALGFPLTRTALVHRV*VHQVVPAIVLFQEQ Trigger: CTGTTCCTGAAACAGCACTATAGCAGGGACAACCTGGTGGACGCATACTCTGTGGACCAGGGCAGTCCTGGTGAGTGGGAAGCCCAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS GCA 90 bp | TGTCTCCAGGACTTCCCTGAGGGGTTAAGACCTTTGCCTTCTTCTTaGTCTCTGCCCTGGGCTTCCCACTCACCAGGACTGCCCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLQDFPEGLRPLPSS*SLPWASHSPGLPWS Trigger: GGACCAGGGCAGTCCTGGTGAGTGGGAAGCCCAGGGCAGAGAGCAAGAAGAAGGCAAAGGTCTTAACCCCTCAGGGAAGTCCTGGAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS CCA 90 bp | AATGTGCGAATGTATCTCCTGATGGCCTGCAACACAGCCTGGGGGTaGCCTTCAAAGCCTGTGCCAGCCAGCGCTTCTGGATGGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NVRMYLLMACNTAWG*PSKPVPASASGWVE Trigger: CTCCACCCATCCAGAAGCGCTGGCTGGCACAGGCTTTGAAGGCCACCCCCAGGCTGTGTTGCAGGCCATCAGGAGATACATTCGCACATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | ATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGGTCCCCAGAAATGCTTaGTCCGTATCCAGTGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ICPEWASANISHARHCGVVPRNA*SVSSAR Trigger: CCGAGCACTGGATACGGACAAAGCATTTCTGGGGAC...CACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | CCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGGTCCCCAGAAATGCTTaGTCCGTATCCAGTGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PEWASANISHARHCGVLWVPRNA*SVSSAR Trigger: CCGAGCACTGGATACGGACAAAGCATTTCTGGGGAC...CCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | ATGTCCGTGGCAAGCTTGTCCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCTTGTCCAGGGGGAGGTaGGCCAACCACTCCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: MSVASLSPRRDDLGLYKSLSRGR*ANHSCS Trigger: ACTGCAGGAGTGGTTGGCCAACCTCCCCCTGGACAA...GCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACAAGCTTGCCACGGACAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | GCACTGTGGGGTGCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATTTCGAGGGGTTAAGACCTTaGCCTTCTTCTTGCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALWGAMAAPGPPFGLRHFEGLRP*PSSCSL Trigger: CAGAGAGCAAGAAGAAGGCAAAGGTCTTAACCCCTC...GAAATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGCACCCCACAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | AGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCAAAGGGCACAACTGCCTaGGCCTCCTTAAGTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVGFCKHQPRQALWGAMAKGTTA*ASLSAW Trigger: CCAGGCACTTAAGGAGGCCAAGGCAGTTGTGCCCTT...TGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS CCA 90 bp | CCAAAGAATGTGCGAATGTATCTCCTGATGGCCTGCAACACAGCCTaGGGGTGGCCTTCAAAGCCTGTGCCAGCCAGCGCTTCTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PKNVRMYLLMACNTA*GWPSKPVPASASGW Trigger: CCATCCAGAAGCGCTGGCTGGCACAGGCTTTGAAGGCCACCCCCAGGCTGTGTTGCAGGCCATCAGGAGATACATTCGCACATTCTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CCA 90 bp | AGGCTGGGCAGAGGTCTGGAGTGGGCCATGGAACCTTTGGAAACTTaGGGTCCTCACTCAAATGGCCTGCCAGGCGGCTGTTTACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: RLGRGLEWAMEPLET*GPHSNGLPGGCLPC Trigger: ACATGGTAAACAGCCGCCTGGCAGGCCATTTGAGTGAGGACCCCAAGTTTCCAAAGGTTCCATGGCCCACTCCAGACCTCTGCCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | ACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGTCTCCAACAGCTTCTaGACTGCAGGCCGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TWDCTRAAESRICPEWASVSNSF*TAGRPG Trigger: CCCTGGCCGGCCTGCAGTCAAGAAGCTGTTGGAGAC...AGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS TCA 90 bp | TATTGGCCACTGTGGCTATCCATGAAGGAAAGGATGTCACTGGACTaGATAGGGTCCAGGGGTGGGCATGCAGGAGGCCAGGTGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YWPLWLSMKERMSLD*IGSRGGHAGGQVPS Trigger: TGAGGGCACCTGGCCTCCTGCATGCCCACCCCTGGACCCTATTCAGTCCAGTGACATCCTTTCCTTCATGGATAGCCACAGTGGCCAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS GCA 90 bp | GCATTATATGGAATCTTGTCCAGGGGGAGGTTGGCCAACCACTCCTaGAGTGTCTCCAACAGCTTCTTGACTGCAGGCCGGCCAGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALYGILSRGRLANHS*SVSNSFLTAGRPGN Trigger: GTTCCCTGGCCGGCCTGCAGTCAAGAAGCTGTTGGAGACACTGCAGGAGTGGTTGGCCAACCTCCCCCTGGACAAGATTCCATATAATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS GCA 90 bp | CAGGACTGCCCTGGTCCACAGAGTATGCGTCCACCAGGTTGTCCCTaGTATAGTGCTGTTTCAGGAACAGAAGCACCTGGCCCTCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: QDCPGPQSMRPPGCP*YSAVSGTEAPGPHS Trigger: GGAATGAGGGCCAGGTGCTTCTGTTCCTGAAACAGCACTATAGCAGGGACAACCTGGTGGACGCATACTCTGTGGACCAGGGCAGTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | CCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCGGCTGTTTACCATGTaGTGCTTTCTCCAAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PEWASANISHARHCGVLWRLFTM*CFLQSQ Trigger: CTGGCTTTGGAGAAAGCACAACATGGTAAACAGCCG...CCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | GCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCACCTTTGCCTTCTTCTaGCTCTCTGCCCTGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAESRICPEWASANISHATFAFF*LSALGF Trigger: GAAGCCCAGGGCAGAGAGCAAGAAGAAGGCAAAGGT...GGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS GCA 90 bp | CATTCTTTGCACCCAAAGAATGTGCGAATGTATCTCCTGATGGCCTaGAACACAGCCTGGGGGTGGCCTTCAAAGCCTGTGCCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSLHPKNVRMYLLMA*NTAWGWPSKPVPAS Trigger: GCTGGCTGGCACAGGCTTTGAAGGCCACCCCCAGGCTGTGTTGCAGGCCATCAGGAGATACATTCGCACATTCTTTGGGTGCAAAGAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS CCA 90 bp | ATCCATGAAGGAAAGGATGTCACTGGACTGAATAGGGTCCAGGGGTaGGCATGCAGGAGGCCAGGTGCCCTCAGTATGGTTCTGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IHEGKDVTGLNRVQG*ACRRPGALSMVLQE Trigger: TTCCTGCAGAACCATACTGAGGGCACCTGGCCTCCTGCATGCCCACCCCTGGACCCTATTCAGTCCAGTGACATCCTTTCCTTCATGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGGCACGGCTGTTTACCATGTaGTGCTTTCTCCAAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVGFCKHQPRQALWGAMARLFTM*CFLQSQ Trigger: CTGGCTTTGGAGAAAGCACAACATGGTAAACAGCCG...TGCCATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCCAGGAGTGTTCATCCTaGGAAACACCTAACGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: SAQSGLLQTSATPGTVGCQECSS*ETPNDD Trigger: ATCATCGTTAGGTGTTTCCAAGGATGAACACTCCTG...GCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS GCA 90 bp | GAAGTGGATGTCATATGTGCGGCACACATCCTGGTTCTTTTCTTCTaGACAGTCCAGAGCAGCAACACGGATGGCAGCAGCCCAGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EVDVICAAHILVLFF*TVQSSNTDGSSPVS Trigger: CGAGACTGGGCTGCTGCCATCCGTGTTGCTGCTCTGGACTGTGCAGAAGAAAAGAACCAGGATGTGTGCCGCACATATGACATCCACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS GCA 90 bp | GGGCCATGGAACCTTTGGAAACTTGGGGTCCTCACTCAAATGGCCTaGCAGGCGGCTGTTTACCATGTTGTGCTTTCTCCAAAGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPWNLWKLGVLTQMA*QAAVYHVVLSPKPE Trigger: CTCTGGCTTTGGAGAAAGCACAACATGGTAAACAGCCGCCTGGCAGGCCATTTGAGTGAGGACCCCAAGTTTCCAAAGGTTCCATGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS CCA 90 bp | GGAGGCCTGAACCGTCAAAGTGTGAAACAGTTTCCAGAGGGAGCATaGGTAGCCCCTCAACTCCAATCGACTTCCTTGACATCCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGLNRQSVKQFPEGA*VAPQLQSTSLTSHP Trigger: TGGGTGGGATGTCAAGGAAGTCGATTGGAGTTGAGGGGCTACCCATGCTCCCTCTGGAAACTGTTTCACACTTTGACGGTTCAGGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | GCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTATGTCCATGAGACCCATTaGGGTAAATCAAGTAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQSGLLQTSATPGTVGCYVHETH*GKSSNR Trigger: CCTGTTACTTGATTTACCCAAATGGGTCTCATGGAC...ATAGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | ATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGGTCCATGAGACCCATTaGGGTAAATCAAGTAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ICPEWASANISHARHCGVVHETH*GKSSNR Trigger: CCTGTTACTTGATTTACCCAAATGGGTCTCATGGAC...CACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | CTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGCTCCAGAAATCTGCATTTaGTTGTTGACTAGGTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPRVGFCKHQPRQALWGAPEICI*LLTRSR Trigger: CCTAGACCTAGTCAACAACAAAATGCAGATTTCTGG...AGCACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS TCA 90 bp | GTTCACCACATTCTTTGCACCCAAAGAATGTGCGAATGTATCTCCTaGTGGCCTGCAACACAGCCTGGGGGTGGCCTTCAAAGCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VHHILCTQRMCECIS*WPATQPGGGLQSLC Trigger: GCACAGGCTTTGAAGGCCACCCCCAGGCTGTGTTGCAGGCCATCAGGAGATACATTCGCACATTCTTTGGGTGCAAAGAATGTGGTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS GCA 90 bp | AGCCAGCTCCACTCTCAGCAGGTAGTGAAGTCCCGACTCCAGGTCTaGAGTATACAGCTTGGCCCTGTCAAATTCTTTCCAAACCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQLHSQQVVKSRLQV*SIQLGPVKFFPNHH Trigger: GTGGTGGTTTGGAAAGAATTTGACAGGGCCAAGCTGTATACTGCAGACCTGGAGTCGGGACTTCACTACCTGCTGAGAGTGGAGCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | GCTATGGCAGCCCCAGGGCCACCCTTCGGGCTCAGACATTTCACTGGAGCTGTCGAAATCTGCATTTTGTaGTTGACTAGGTCTAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AMAAPGPPFGLRHFTGAVEICIL*LTRSRM Trigger: CATCCTAGACCTAGTCAACAACAAAATGCAGATTTC...GACAGCTCCAGTGAAATGTCTGAGCCCGAAGGGTGGCCCTGGGGCTGCCATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | ATCTGCCCAGAGTGGGCTTCTGCAAACATCAGCCACGCCAGGCACTGTGGGGTGATGATCTGGGCTTGTTaGTTTTTAAGCACAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: ICPEWASANISHARHCGVMIWAC*FLSTGL Trigger: GAGTCCTGTGCTTAAAAACAAACAAGCCCAGATCAT...CACCCCACAGTGCCTGGCGTGGCTGATGTTTGCAGAAGCCCACTCTGGGCAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS GCA 90 bp | GGCCAGGTGCCCTCAGTATGGTTCTGCAGGAAGTCGATCATTGTCTaGCTGACTGTCCGCAGCTCCCTGTCAGGTCCTTTAAAATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GQVPSVWFCRKSIIV*LTVRSSLSGPLKFS Trigger: AGAAAATTTTAAAGGACCTGACAGGGAGCTGCGGACAGTCAGGCAGACAATGATCGACTTCCTGCAGAACCATACTGAGGGCACCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS GCA 90 bp | GGGTCCTCACTCAAATGGCCTGCCAGGCGGCTGTTTACCATGTTGTaGTTTCTCCAAAGCCAGAGAACAGCTTGGTCTGGAGTTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GSSLKWPARRLFTML*FLQSQRTAWSGVFT Trigger: TGTGAAAACTCCAGACCAAGCTGTTCTCTGGCTTTGGAGAAAGCACAACATGGTAAACAGCCGCCTGGCAGGCCATTTGAGTGAGGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | ACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTGCAAACATGGGCCATGGAACCTTaGGAAACTTGGGGTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVQEQLKVGSAQSGLLQTWAMEP*ETWGPH Trigger: GTGAGGACCCCAAGTTTCCAAAGGTTCCATGGCCCA...TGTTTGCAGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCTGTTCACCACATTCTTaGCACCCAAAGAATGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PPEGMTWDCTRAAESRICCSPHS*HPKNVR Trigger: TCGCACATTCTTTGGGTGCAAAGAATGTGGTGAACA...GCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCCCAGAGTGGGCTTCTAAGCCAGAGAACAGCTaGGTCTGGAGTTTTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TWDCTRAAESRICPEWASKPENS*VWSFHR Trigger: TCTGTGAAAACTCCAGACCAAGCTGTTCTCTGGCTT...AGAAGCCCACTCTGGGCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCTGCATCTGCATTTTGTTGTaGACTAGGTCTAGGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPEGMTWDCTRAAESRICICILL*TRSRMA Trigger: TGCCATCCTAGACCTAGTCAACAACAAAATGCAGAT...GCAGATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCATCTGCATTTTGTTGTaGACTAGGTCTAGGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPPEGMTWDCTRAAESRIICILL*TRSRMA Trigger: TGCCATCCTAGACCTAGTCAACAACAAAATGCAGAT...GATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS-3UTR CAA 90 bp | TGTCCCCCAGAAGGGATGACCTGGGACTGTACAAGAGCAGCTGAAAGTAGGATCGAAATCTGCATTTTGTaGTTGACTAGGTCTAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: CPPEGMTWDCTRAAESRIEICIL*LTRSRM Trigger: CATCCTAGACCTAGTCAACAACAAAATGCAGATTTC...GATCCTACTTTCAGCTGCTCTTGTACAGTCCCAGGTCATCCCTTCTGGGGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | TTAAAACAGACCTTACACTTGGCCCAAAGATGGGTCCCTGGAGGGATGCAAGCCAACGATGATCTGGGCTaGTTTGTTTTTAAGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKQTLHLAQRWVPGGMQANDDLG*FVFKHR Trigger: CCTGTGCTTAAAAACAAACAAGCCCAGATCATCGTT...GGCTTGCATCCCTCCAGGGACCCATCTTTGGGCCAAGTGTAAGGTCTGTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS TCA 90 bp | CAGTCCATGAGACCCATTTGGGTAAATCAAGTAACAGGAAGGCACTaGAGTAATGCCAAGTGTCCCCAGAAATGCTTTGTCCGTATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QSMRPIWVNQVTGRH*SNAKCPQKCFVRIQ Trigger: CTGGATACGGACAAAGCATTTCTGGGGACACTTGGCATTACTTCAGTGCCTTCCTGTTACTTGATTTACCCAAATGGGTCTCATGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS TCA 90 bp | GTGTCCCCAGAAATGCTTTGTCCGTATCCAGTGCTCGGCTCACCATaGTGTTTTCATATGGAATCAAATCTAAGATCACCTCTCGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VSPEMLCPYPVLGSP*CFHMESNLRSPLVQ Trigger: TTGGACGAGAGGTGATCTTAGATTTGATTCCATATGAAAACATCATGGTGAGCCGAGCACTGGATACGGACAAAGCATTTCTGGGGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | TGCAAGCCTTTTCACTGCAGAATGAACAGTTCAAACAGGGATGTCCGTGGCAAGCCAGAAATCTGCATTTaGTTGTTGACTAGGTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CKPFHCRMNSSNRDVRGKPEICI*LLTRSR Trigger: CCTAGACCTAGTCAACAACAAAATGCAGATTTCTGG...CTTGCCACGGACATCCCTGTTTGAACTGTTCATTCTGCAGTGAAAAGGCTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS-3UTR CAA 90 bp | TTAAATAGGCCCAATTCTCAAGCTGACAGACCAGGAGTGTTCATCCTTGGAAACAAGCCAGAGAACAGCTaGGTCTGGAGTTTTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LNRPNSQADRPGVFILGNKPENS*VWSFHR Trigger: TCTGTGAAAACTCCAGACCAAGCTGTTCTCTGGCTT...GTTTCCAAGGATGAACACTCCTGGTCTGTCAGCTTGAGAATTGGGCCTATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS CCA 90 bp | GTTTACCATGTTGTGCTTTCTCCAAAGCCAGAGAACAGCTTGGTCTaGAGTTTTCACAGAATCCATGGACTCCTTAGCCATTTCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VYHVVLSPKPENSLV*SFHRIHGLLSHFLK Trigger: TTTGAGGAAATGGCTAAGGAGTCCATGGATTCTGTGAAAACTCCAGACCAAGCTGTTCTCTGGCTTTGGAGAAAGCACAACATGGTAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS TCA 72 bp | CCGCACGCTGCCGCTGTCCAGCAACCACACGGCGTCTaGGCCCTCGCGGTAGAGCCGCGCCCCGCCGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PHAAAVQQPHGV*ALAVEPRPAAL Trigger: GAGGGCGGCGGGGCGCGGCTCTACCGCGAGGGCTCAGACGCCGTGTGGTTGCTGGACAGCGGCAGCGTGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS CCA 72 bp | GAGCAGCCGCGGCAGCCGCGCGGCTCGAAGAGACGGTaGCTGCCGCGCATAAGCTCCTGGATCCCGCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: EQPRQPRGSKRR*LPRISSWIPRH Trigger: GTGGCGCGGGATCCAGGAGCTTATGCGCGGCAGCCACCGTCTCTTCGAGCCGCGCGGCTGCCGCGGCTGCTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS TCA 72 bp | GCACCACGACGAGTGGAACTGCACCAGCCACGCGGCTaGGCTGTTGCCCGTGGCCGACCGCACGCTGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: APRRVELHQPRG*AVARGRPHAAA Trigger: AGCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAGCCGCGTGGCTGGTGCAGTTCCACTCGTCGTGGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS GCA 72 bp | ACGCGGCTGAGCTGTTGCCCGTGGCCGACCGCACGCTaGCGCTGTCCAGCAACCACACGGCGTCTGAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TRLSCCPWPTAR*RCPATTRRLSP Trigger: AGGGCTCAGACGCCGTGTGGTTGCTGGACAGCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAGCCGCGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS CAA 72 bp | GACGAGTGGAACTGCACCAGCCACGCGGCTGAGCTGTaGCCCGTGGCCGACCGCACGCTGCCGCTGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DEWNCTSHAAEL*PVADRTLPLSS Trigger: GCTGGACAGCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAGCCGCGTGGCTGGTGCAGTTCCACTCGTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS CAA 90 bp | CCGCACCACGACGAGTGGAACTGCACCAGCCACGCGGCTGAGCTGTaGCCCGTGGCCGACCGCACGCTGCCGCTGTCCAGCAACCACACG | + |
|
Preference number: 6 (lower is better) Translates to: PHHDEWNCTSHAAEL*PVADRTLPLSSNHT Trigger: CGTGTGGTTGCTGGACAGCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAGCCGCGTGGCTGGTGCAGTTCCACTCGTCGTGGTGCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS GCA 72 bp | ACGAGTGGAACTGCACCAGCCACGCGGCTGAGCTGTTaGCCGTGGCCGACCGCACGCTGCCGCTGTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TSGTAPATRLSC*PWPTARCRCPA Trigger: TGCTGGACAGCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAGCCGCGTGGCTGGTGCAGTTCCACTCGT 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS CCA 72 bp | GGAACTGCACCAGCCACGCGGCTGAGCTGTTGCCCGTaGCCGACCGCACGCTGCCGCTGTCCAGCAACCACA | + |
|
Preference number: 6 (lower is better) Translates to: GTAPATRLSCCP*PTARCRCPATT Trigger: TGTGGTTGCTGGACAGCGGCAGCGTGCGGTCGGCCACGGGCAACAGCTCAGCCGCGTGGCTGGTGCAGTTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS CCA 72 bp | TCTTTTCTTCTGCACAGTCCAGAGCAGCAACACGGATaGCAGCAGCCCAGTCTCGCACGTCCGCCGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SFLLHSPEQQHG*QQPSLARPPPA Trigger: CGCTGGCGGCGGACGTGCGAGACTGGGCTGCTGCCATCCGTGTTGCTGCTCTGGACTGTGCAGAAGAAAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS CCA 72 bp | TCTCTGCCCTGGGCTTCCCACTCACCAGGACTGCCCTaGTCCACAGAGTATGCGTCCACCAGGTTGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLPWASHSPGLP*STEYASTRLSL Trigger: CAGGGACAACCTGGTGGACGCATACTCTGTGGACCAGGGCAGTCCTGGTGAGTGGGAAGCCCAGGGCAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS CAA 90 bp | AGGGGGAGGTTGGCCAACCACTCCTGCAGTGTCTCCAACAGCTTCTaGACTGCAGGCCGGCCAGGGAACAGCTTGGCAACGACAGTCACG | + |
|
Preference number: 6 (lower is better) Translates to: RGRLANHSCSVSNSF*TAGRPGNSLATTVT Trigger: CGTGACTGTCGTTGCCAAGCTGTTCCCTGGCCGGCCTGCAGTCAAGAAGCTGTTGGAGACACTGCAGGAGTGGTTGGCCAACCTCCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS TCA 72 bp | GGCCATCTGCCCCAGCCAAGGTCTGGCTCTCAGAACTaGTCCAGGACTGCCCTGGTCCACAGAGTATGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GHLPQPRSGSQN*SRTALVHRVCV Trigger: GACGCATACTCTGTGGACCAGGGCAGTCCTGGATCAGTTCTGAGAGCCAGACCTTGGCTGGGGCAGATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS CCA 72 bp | GTGCGAATGTATCTCCTGATGGCCTGCAACACAGCCTaGGGGTGGCCTTCAAAGCCTGTGCCAGCCAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: VRMYLLMACNTA*GWPSKPVPASA Trigger: AGCGCTGGCTGGCACAGGCTTTGAAGGCCACCCCCAGGCTGTGTTGCAGGCCATCAGGAGATACATTCGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS GCA 72 bp | GGAATCTTGTCCAGGGGGAGGTTGGCCAACCACTCCTaGAGTGTCTCCAACAGCTTCTTGACTGCAGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GILSRGRLANHS*SVSNSFLTAGR Trigger: CCGGCCTGCAGTCAAGAAGCTGTTGGAGACACTGCAGGAGTGGTTGGCCAACCTCCCCCTGGACAAGATTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS CCA 72 bp | CCACGTAGAGCACCACGCAGAGGCTCATGTCCAGACTaGAGAAGCCAACCCCAAGGAAGGGCACAACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRRAPRRGSCPD*RSQPQGRAQLP Trigger: AGGCAGTTGTGCCCTTCCTTGGGGTTGGCTTCTCCAGTCTGGACATGAGCCTCTGCGTGGTGCTCTACGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
||
| CDS CAA 72 bp | CAGAGGTCTGGAGTGGGCCATGGAACCTTTGGAAACTaGGGGTCCTCACTCAAATGGCCTGCCAGGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QRSGVGHGTFGN*GSSLKWPARRL Trigger: CAGCCGCCTGGCAGGCCATTTGAGTGAGGACCCCAAGTTTCCAAAGGTTCCATGGCCCACTCCAGACCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS CAA 90 bp | CAGGCTGGGCAGAGGTCTGGAGTGGGCCATGGAACCTTTGGAAACTaGGGGTCCTCACTCAAATGGCCTGCCAGGCGGCTGTTTACCATG | + |
|
Preference number: 6 (lower is better) Translates to: QAGQRSGVGHGTFGN*GSSLKWPARRLFTM Trigger: CATGGTAAACAGCCGCCTGGCAGGCCATTTGAGTGAGGACCCCAAGTTTCCAAAGGTTCCATGGCCCACTCCAGACCTCTGCCCAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
||
| CDS GCA 72 bp | CCAGCCAAGGTCTGGCTCTCAGAACTGATCCAGGACTaGCCTGGTCCACAGAGTATGCGTCCACCAGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PAKVWLSELIQD*PGPQSMRPPGC Trigger: ACAACCTGGTGGACGCATACTCTGTGGACCAGGGCAGTCCTGGATCAGTTCTGAGAGCCAGACCTTGGCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
||
| CDS CCA 72 bp | AGGGGTGGGCATGCAGGAGGCCAGGTGCCCTCAGTATaGTTCTGCAGGAAGTCGATCATTGTCTGCCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: RGGHAGGQVPSV*FCRKSIIVCLT Trigger: AGTCAGGCAGACAATGATCGACTTCCTGCAGAACCATACTGAGGGCACCTGGCCTCCTGCATGCCCACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS CCA 72 bp | AGAGGTCTGGAGTGGGCCATGGAACCTTTGGAAACTTaGGGTCCTCACTCAAATGGCCTGCCAGGCGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RGLEWAMEPLET*GPHSNGLPGGC Trigger: ACAGCCGCCTGGCAGGCCATTTGAGTGAGGACCCCAAGTTTCCAAAGGTTCCATGGCCCACTCCAGACCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CCA 72 bp | CAAGGTCTGGCTCTCAGAACTGATCCAGGACTGCCCTaGTCCACAGAGTATGCGTCCACCAGGTTGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: QGLALRTDPGLP*STEYASTRLSL Trigger: CAGGGACAACCTGGTGGACGCATACTCTGTGGACCAGGGCAGTCCTGGATCAGTTCTGAGAGCCAGACCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS TCA 72 bp | CTGTGGCTATCCATGAAGGAAAGGATGTCACTGGACTaGATAGGGTCCAGGGGTGGGCATGCAGGAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LWLSMKERMSLD*IGSRGGHAGGQ Trigger: CTGGCCTCCTGCATGCCCACCCCTGGACCCTATTCAGTCCAGTGACATCCTTTCCTTCATGGATAGCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS TCA 72 bp | CAGGGAACAGCTTGGCAACGACAGTCACGAAGTCCCTaGATGTCTTTAACTGGGCTCCAGCCAGGGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: QGTAWQRQSRSP*MSLTGLQPGTC Trigger: ACAGGTCCCTGGCTGGAGCCCAGTTAAAGACATTCAGGGACTTCGTGACTGTCGTTGCCAAGCTGTTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS GCA 72 bp | CACCCAAAGAATGTGCGAATGTATCTCCTGATGGCCTaGAACACAGCCTGGGGGTGGCCTTCAAAGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: HPKNVRMYLLMA*NTAWGWPSKPV Trigger: CACAGGCTTTGAAGGCCACCCCCAGGCTGTGTTGCAGGCCATCAGGAGATACATTCGCACATTCTTTGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS GCA 72 bp | TTCCCACTCACCAGGACTGCCCTGGTCCACAGAGTATaGGTCCACCAGGTTGTCCCTGCTATAGTGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: FPLTRTALVHRV*VHQVVPAIVLF Trigger: AAACAGCACTATAGCAGGGACAACCTGGTGGACGCATACTCTGTGGACCAGGGCAGTCCTGGTGAGTGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS CCA 72 bp | GCCTTTAATTTCCTCATGGCAGGCTGGGCAGAGGTCTaGAGTGGGCCATGGAACCTTTGGAAACTTGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: AFNFLMAGWAEV*SGPWNLWKLGV Trigger: GACCCCAAGTTTCCAAAGGTTCCATGGCCCACTCCAGACCTCTGCCCAGCCTGCCATGAGGAAATTAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CCA 72 bp | TCTGGAGTCTTAGGTCCAGCCTGTGATGCAGGCTCTTaGAAAGGTCAGTTCTGGGACCCAGGATATGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: SGVLGPACDAGS*KGQFWDPGYGV Trigger: CACCCCATATCCTGGGTCCCAGAACTGACCTTTCCAAGAGCCTGCATCACAGGCTGGACCTAAGACTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091263.12 |
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| CDS CAA 90 bp | AGTGTCTCCAACAGCTTCTTGACTGCAGGCCGGCCAGGGAACAGCTaGGCAACGACAGTCACGAAGTCCCTGAATGTCTTTAACTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SVSNSFLTAGRPGNS*ATTVTKSLNVFNWA Trigger: AGCCCAGTTAAAGACATTCAGGGACTTCGTGACTGTCGTTGCCAAGCTGTTCCCTGGCCGGCCTGCAGTCAAGAAGCTGTTGGAGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS GCA 72 bp | GTCATATGTGCGGCACACATCCTGGTTCTTTTCTTCTaGACAGTCCAGAGCAGCAACACGGATGGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VICAAHILVLFF*TVQSSNTDGSS Trigger: GCTGCTGCCATCCGTGTTGCTGCTCTGGACTGTGCAGAAGAAAAGAACCAGGATGTGTGCCGCACATATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS GCA 72 bp | CCCTCAGTATGGTTCTGCAGGAAGTCGATCATTGTCTaGCTGACTGTCCGCAGCTCCCTGTCAGGTCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: PSVWFCRKSIIV*LTVRSSLSGPL Trigger: TAAAGGACCTGACAGGGAGCTGCGGACAGTCAGGCAGACAATGATCGACTTCCTGCAGAACCATACTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036187.9 |
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| CDS CAA 72 bp | AACAGCTTCTTGACTGCAGGCCGGCCAGGGAACAGCTaGGCAACGACAGTCACGAAGTCCCTGAATGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: NSFLTAGRPGNS*ATTVTKSLNVF Trigger: AAAGACATTCAGGGACTTCGTGACTGTCGTTGCCAAGCTGTTCCCTGGCCGGCCTGCAGTCAAGAAGCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS GCA 72 bp | CTCAAATGGCCTGCCAGGCGGCTGTTTACCATGTTGTaGTTTCTCCAAAGCCAGAGAACAGCTTGGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LKWPARRLFTML*FLQSQRTAWSG Trigger: TCCAGACCAAGCTGTTCTCTGGCTTTGGAGAAAGCACAACATGGTAAACAGCCGCCTGGCAGGCCATTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 72 bp | GGAGCATGGGTAGCCCCTCAACTCCAATCGACTTCCTaGACATCCCACCCACTTTACGTGGCTGGTAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: GAWVAPQLQSTS*TSHPLYVAGKK Trigger: TTTCTTACCAGCCACGTAAAGTGGGTGGGATGTCAAGGAAGTCGATTGGAGTTGAGGGGCTACCCATGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 90 bp | TTGGGGTCCTCACTCAAATGGCCTGCCAGGCGGCTGTTTACCATGTaGTGCTTTCTCCAAAGCCAGAGAACAGCTTGGTCTGGAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LGSSLKWPARRLFTM*CFLQSQRTAWSGVF Trigger: GAAAACTCCAGACCAAGCTGTTCTCTGGCTTTGGAGAAAGCACAACATGGTAAACAGCCGCCTGGCAGGCCATTTGAGTGAGGACCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 90 bp | ACTAGGTCTAGGATGGCATTATATGGAATCTTGTCCAGGGGGAGGTaGGCCAACCACTCCTGCAGTGTCTCCAACAGCTTCTTGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: TRSRMALYGILSRGR*ANHSCSVSNSFLTA Trigger: TGCAGTCAAGAAGCTGTTGGAGACACTGCAGGAGTGGTTGGCCAACCTCCCCCTGGACAAGATTCCATATAATGCCATCCTAGACCTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 90 bp | TTTCCAGAGGGAGCATGGGTAGCCCCTCAACTCCAATCGACTTCCTaGACATCCCACCCACTTTACGTGGCTGGTAAGAAAGATTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: FPEGAWVAPQLQSTS*TSHPLYVAGKKDSR Trigger: TCTGGAATCTTTCTTACCAGCCACGTAAAGTGGGTGGGATGTCAAGGAAGTCGATTGGAGTTGAGGGGCTACCCATGCTCCCTCTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS TCA 72 bp | ATTCTTTGCACCCAAAGAATGTGCGAATGTATCTCCTaGTGGCCTGCAACACAGCCTGGGGGTGGCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: ILCTQRMCECIS*WPATQPGGGLQ Trigger: TTGAAGGCCACCCCCAGGCTGTGTTGCAGGCCATCAGGAGATACATTCGCACATTCTTTGGGTGCAAAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS GCA 72 bp | CACTCTCAGCAGGTAGTGAAGTCCCGACTCCAGGTCTaGAGTATACAGCTTGGCCCTGTCAAATTCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HSQQVVKSRLQV*SIQLGPVKFFP Trigger: TGGAAAGAATTTGACAGGGCCAAGCTGTATACTGCAGACCTGGAGTCGGGACTTCACTACCTGCTGAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CCA 72 bp | CATGGAACCTTTGGAAACTTGGGGTCCTCACTCAAATaGCCTGCCAGGCGGCTGTTTACCATGTTGTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: HGTFGNLGSSLK*PARRLFTMLCF Trigger: AAAGCACAACATGGTAAACAGCCGCCTGGCAGGCCATTTGAGTGAGGACCCCAAGTTTCCAAAGGTTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 72 bp | TCACTCAAATGGCCTGCCAGGCGGCTGTTTACCATGTaGTGCTTTCTCCAAAGCCAGAGAACAGCTTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SLKWPARRLFTM*CFLQSQRTAWS Trigger: AGACCAAGCTGTTCTCTGGCTTTGGAGAAAGCACAACATGGTAAACAGCCGCCTGGCAGGCCATTTGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CCA 72 bp | AACCGTCAAAGTGTGAAACAGTTTCCAGAGGGAGCATaGGTAGCCCCTCAACTCCAATCGACTTCCTTGACA | + |
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Preference number: 6 (lower is better) Translates to: NRQSVKQFPEGA*VAPQLQSTSLT Trigger: TGTCAAGGAAGTCGATTGGAGTTGAGGGGCTACCCATGCTCCCTCTGGAAACTGTTTCACACTTTGACGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 72 bp | GGCACTGAAGTAATGCCAAGTGTCCCCAGAAATGCTTaGTCCGTATCCAGTGCTCGGCTCACCATGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: GTEVMPSVPRNA*SVSSARLTMMF Trigger: AAACATCATGGTGAGCCGAGCACTGGATACGGACAAAGCATTTCTGGGGACACTTGGCATTACTTCAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 72 bp | TTGTTGACTAGGTCTAGGATGGCATTATATGGAATCTaGTCCAGGGGGAGGTTGGCCAACCACTCCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LLTRSRMALYGI*SRGRLANHSCS Trigger: ACTGCAGGAGTGGTTGGCCAACCTCCCCCTGGACAAGATTCCATATAATGCCATCCTAGACCTAGTCAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 90 bp | TGCATTTTGTTGTTGACTAGGTCTAGGATGGCATTATATGGAATCTaGTCCAGGGGGAGGTTGGCCAACCACTCCTGCAGTGTCTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: CILLLTRSRMALYGI*SRGRLANHSCSVSN Trigger: GTTGGAGACACTGCAGGAGTGGTTGGCCAACCTCCCCCTGGACAAGATTCCATATAATGCCATCCTAGACCTAGTCAACAACAAAATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS GCA 72 bp | GCCAAGTGTCCCCAGAAATGCTTTGTCCGTATCCAGTaGTCGGCTCACCATGATGTTTTCATATGGAATCAA | + |
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Preference number: 6 (lower is better) Translates to: AKCPQKCFVRIQ*SAHHDVFIWNQ Trigger: TTGATTCCATATGAAAACATCATGGTGAGCCGAGCACTGGATACGGACAAAGCATTTCTGGGGACACTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CCA 72 bp | GTTGTGCTTTCTCCAAAGCCAGAGAACAGCTTGGTCTaGAGTTTTCACAGAATCCATGGACTCCTTAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: VVLSPKPENSLV*SFHRIHGLLSH Trigger: ATGGCTAAGGAGTCCATGGATTCTGTGAAAACTCCAGACCAAGCTGTTCTCTGGCTTTGGAGAAAGCACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 90 bp | TCCATGGACTCCTTAGCCATTTCCTCAAAATGTTCACCACATTCTTaGCACCCAAAGAATGTGCGAATGTATCTCCTGATGGCCTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: SMDSLAISSKCSPHS*HPKNVRMYLLMACN Trigger: GTTGCAGGCCATCAGGAGATACATTCGCACATTCTTTGGGTGCAAAGAATGTGGTGAACATTTTGAGGAAATGGCTAAGGAGTCCATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CCA 72 bp | ACCATGTTGTGCTTTCTCCAAAGCCAGAGAACAGCTTaGTCTGGAGTTTTCACAGAATCCATGGACTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: TMLCFLQSQRTA*SGVFTESMDSL Trigger: TAAGGAGTCCATGGATTCTGTGAAAACTCCAGACCAAGCTGTTCTCTGGCTTTGGAGAAAGCACAACATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS TCA 72 bp | GAAATGCTTTGTCCGTATCCAGTGCTCGGCTCACCATaGTGTTTTCATATGGAATCAAATCTAAGATCACCT | + |
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Preference number: 6 (lower is better) Translates to: EMLCPYPVLGSP*CFHMESNLRSP Trigger: AGGTGATCTTAGATTTGATTCCATATGAAAACATCATGGTGAGCCGAGCACTGGATACGGACAAAGCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 72 bp | TCCTTAGCCATTTCCTCAAAATGTTCACCACATTCTTaGCACCCAAAGAATGTGCGAATGTATCTCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SLAISSKCSPHS*HPKNVRMYLLM Trigger: CATCAGGAGATACATTCGCACATTCTTTGGGTGCAAAGAATGTGGTGAACATTTTGAGGAAATGGCTAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 90 bp | CACTTTACGTGGCTGGTAAGAAAGATTCCAGAAATCTGCATTTTGTaGTTGACTAGGTCTAGGATGGCATTATATGGAATCTTGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: HFTWLVRKIPEICIL*LTRSRMALYGILSR Trigger: CCTGGACAAGATTCCATATAATGCCATCCTAGACCTAGTCAACAACAAAATGCAGATTTCTGGAATCTTTCTTACCAGCCACGTAAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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| CDS CAA 72 bp | ACGTGGCTGGTAAGAAAGATTCCAGAAATCTGCATTTaGTTGTTGACTAGGTCTAGGATGGCATTATATGGA | + |
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Preference number: 6 (lower is better) Translates to: TWLVRKIPEICI*LLTRSRMALYG Trigger: TCCATATAATGCCATCCTAGACCTAGTCAACAACAAAATGCAGATTTCTGGAATCTTTCTTACCAGCCACGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036187.9 ENSMUST00000091263.12 |
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