RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for QSER1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074994

Ensembl transcript IDs: ENSMUST00000117237.2, ENSMUST00000231375.2, ENSMUST00000238887.2

Found 524 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAAGCAGTCACAGAATTGCACAGCTCCACACCATTTCCCGGACATaGAAAAGGAGTCCACAGGGCAGGGTGCAGCTGCTGAGCTTCATG +
Preference number: 1 (lower is better)
Translates to: KSSHRIAQLHTISRT*KRSPQGRVQLLSFM
Trigger: CATGAAGCTCAGCAGCTGCACCCTGCCCTGTGGACTCCTTTTGCATGTCCGGGAAATGGTGTGGAGCTGTGCAATTCTGTGACTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CCA 90 bp ATGAATGCTGATAGGCAGACAAAGTTGGTGGTGGAAGTGTCCCAGTaGTTGGCAAGGGTCCTGCAACAAACAGCTCAGTTGCTGCTGAGG +
Preference number: 1 (lower is better)
Translates to: MNADRQTKLVVEVSQ*LARVLQQTAQLLLR
Trigger: CCTCAGCAGCAACTGAGCTGTTTGTTGCAGGACCCTTGCCAACCACTGGGACACTTCCACCACCAACTTTGTCTGCCTATCAGCATTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 90 bp TTCCTTCATTGCTCTTGTGTTCAGAAAACGAGTGACAGAGGGGGCTaGAGGCTCAAAGCCCTCATCCTCACTACTGCTAGAACGGACCTC +
Preference number: 1 (lower is better)
Translates to: FLHCSCVQKTSDRGG*RLKALILTTARTDL
Trigger: GAGGTCCGTTCTAGCAGTAGTGAGGATGAGGGCTTTGAGCCTCCAGCCCCCTCTGTCACTCGTTTTCTGAACACAAGAGCAATGAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 90 bp AAATGGTTTACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTaGAGTTCACAAGGGAACAGAAAGCTAGGCATGGTGGCTCACGTC +
Preference number: 1 (lower is better)
Translates to: KWFTTGLSYEQAEGN*SSQGNRKLGMVAHV
Trigger: GACGTGAGCCACCATGCCTAGCTTTCTGTTCCCTTGTGAACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR GCA 90 bp CGGCCTGAGGCTGATATTTCCTATGCTGTAAGAATAAACGAGAGGTaGAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGAC +
Preference number: 1 (lower is better)
Translates to: RPEADISYAVRINER*NSSEQQGLEGSSQD
Trigger: GTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATCAGCCTCAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR GCA 90 bp GATATGTTGAAGACTGAGGTGGTACGCTGTTACTTAATGCAGAACTaGCCAGGCGCTCAAATGCCAAAGCAGTCGGAACAGTTCCCTGGG +
Preference number: 1 (lower is better)
Translates to: DMLKTEVVRCYLMQN*PGAQMPKQSEQFPG
Trigger: CCCAGGGAACTGTTCCGACTGCTTTGGCATTTGAGCGCCTGGGCAGTTCTGCATTAAGTAACAGCGTACCACCTCAGTCTTCAACATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 90 bp GACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATaGACAGGCCGAGGGCAACTGCAGTTCACAAGGGAACAGAAAGCT +
Preference number: 1 (lower is better)
Translates to: DLAFTCEMVYNRTQL*TGRGQLQFTREQKA
Trigger: AGCTTTCTGTTCCCTTGTGAACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 90 bp CTTTGCAAAAGGTGGGGGACAGAACGTACGGGTGGTTTGGATTCCTaGTCGTCTGGTTCTGTTAGGTACTCGAACAGCAAGAGTGGAGAA +
Preference number: 1 (lower is better)
Translates to: LCKRWGTERTGGLDS*SSGSVRYSNSKSGE
Trigger: TTCTCCACTCTTGCTGTTCGAGTACCTAACAGAACCAGACGATCAGGAATCCAAACCACCCGTACGTTCTGTCCCCCACCTTTTGCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 90 bp TATCTGTTGCGGACTCTGAACACGCTGTACTTGCAAGGATGCCTTTaGTTGTCCCAGGCTAGCCTGGAGAATTCCAGCCTGTTGAAGAAT +
Preference number: 1 (lower is better)
Translates to: YLLRTLNTLYLQGCL*LSQASLENSSLLKN
Trigger: ATTCTTCAACAGGCTGGAATTCTCCAGGCTAGCCTGGGACAAGCAAAGGCATCCTTGCAAGTACAGCGTGTTCAGAGTCCGCAACAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 90 bp GCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTaGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATGAA +
Preference number: 1 (lower is better)
Translates to: AIPLSSRVLREAHRT*PSLVKWFTTGLSYE
Trigger: TTCATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CCA 90 bp GGTGATGTCTTTGCAAAAGGTGGGGGACAGAACGTACGGGTGGTTTaGATTCCTGATCGTCTGGTTCTGTTAGGTACTCGAACAGCAAGA +
Preference number: 1 (lower is better)
Translates to: GDVFAKGGGQNVRVV*IPDRLVLLGTRTAR
Trigger: TCTTGCTGTTCGAGTACCTAACAGAACCAGACGATCAGGAATCCAAACCACCCGTACGTTCTGTCCCCCACCTTTTGCAAAGACATCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 90 bp GGTCTGAGCATTTGGGGATGGATGCATAGAAGTATAACTTGGTGTTaGGGTAGAAACTGGCAAGCTCTGACCCCGAGAGGCAGAAGAATA +
Preference number: 1 (lower is better)
Translates to: GLSIWGWMHRSITWC*GRNWQALTPRGRRI
Trigger: TATTCTTCTGCCTCTCGGGGTCAGAGCTTGCCAGTTTCTACCCCAACACCAAGTTATACTTCTATGCATCCATCCCCAAATGCTCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 90 bp GAGTCCACAGGGCAGGGTGCAGCTGCTGAGCTTCATGTTCTAAATTaGAGACATTTTTACACAGGATGCCACACACCAGATCACTTTCCA +
Preference number: 1 (lower is better)
Translates to: ESTGQGAAAELHVLN*RHFYTGCHTPDHFP
Trigger: TGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAATGTCTTCAATTTAGAACATGAAGCTCAGCAGCTGCACCCTGCCCTGTGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 90 bp TTTCCCGGACATGCAAAAGGAGTCCACAGGGCAGGGTGCAGCTGCTaGGCTTCATGTTCTAAATTGAAGACATTTTTACACAGGATGCCA +
Preference number: 1 (lower is better)
Translates to: FPGHAKGVHRAGCSC*ASCSKLKTFLHRMP
Trigger: TGGCATCCTGTGTAAAAATGTCTTCAATTTAGAACATGAAGCTCAGCAGCTGCACCCTGCCCTGTGGACTCCTTTTGCATGTCCGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR GCA 90 bp CTCACGTCTATGATCCCAGCATTTTGGAGGCTGAGACAGGTGGGCTaGCATGAATTTGGAGCCAATGGACTAATATTGAGTTCTAGACCA +
Preference number: 1 (lower is better)
Translates to: LTSMIPAFWRLRQVG*HEFGANGLILSSRP
Trigger: TGGTCTAGAACTCAATATTAGTCCATTGGCTCCAAATTCATGGCAGCCCACCTGTCTCAGCCTCCAAAATGCTGGGATCATAGACGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTaGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATCAGT +
Preference number: 1 (lower is better)
Translates to: SLIPQCGSWNSGCQA*LKVPIPTGPSNCIS
Trigger: ACTGATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CCA 90 bp CAGAAACTCTTGGGGCTGAGCAGAAGATCCTTGGGTCTGAGCATTTaGGGATGGATGCATAGAAGTATAACTTGGTGTTGGGGTAGAAAC +
Preference number: 1 (lower is better)
Translates to: QKLLGLSRRSLGLSI*GWMHRSITWCWGRN
Trigger: GTTTCTACCCCAACACCAAGTTATACTTCTATGCATCCATCCCCAAATGCTCAGACCCAAGGATCTTCTGCTCAGCCCCAAGAGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 90 bp TTTCCAAGGAAGGGGAAGTGTATGGTACATACACATCTGTCCCTCTaGGGTTCTGTCGCTTGCATTGAGCAGACCTTTTCAGCTGTTTTT +
Preference number: 1 (lower is better)
Translates to: FPRKGKCMVHTHLSL*GSVACIEQTFSAVF
Trigger: AAAAACAGCTGAAAAGGTCTGCTCAATGCAAGCGACAGAACCCCAGAGGGACAGATGTGTATGTACCATACACTTCCCCTTCCTTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 90 bp AGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTaGACTGTGGCCAGACACAAATGCTTTCTGCTGTCTCTTTACTTC +
Preference number: 1 (lower is better)
Translates to: RMPHTRSLSTTYNTF*TVARHKCFLLSLYF
Trigger: GAAGTAAAGAGACAGCAGAAAGCATTTGTGTCTGGCCACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 90 bp AGAAGCATTGCCTCTGAGAAGCATATTGATCCAAGAGAAACAAACTaGTTCTTTGAGTCATGTGGATTGGCTTCACTGAAGGGGCCCTTT +
Preference number: 1 (lower is better)
Translates to: RSIASEKHIDPRETN*FFESCGLASLKGPF
Trigger: AAAGGGCCCCTTCAGTGAAGCCAATCCACATGACTCAAAGAATCAGTTTGTTTCTCTTGGATCAATATGCTTCTCAGAGGCAATGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 90 bp GTCAACTGTTTCTTGAATGGGTCAGAACTTTGTTCCTGGATTTCCTaGCCCAGTCCAACCATGGCAGAAGGTACTTTAGTTGGTATAGTT +
Preference number: 1 (lower is better)
Translates to: VNCFLNGSELCSWIS*PSPTMAEGTLVGIV
Trigger: AACTATACCAACTAAAGTACCTTCTGCCATGGTTGGACTGGGTCAGGAAATCCAGGAACAAAGTTCTGACCCATTCAAGAAACAGTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 90 bp CAACTTACAATACTTTCTGCACTGTGGCCAGACACAAATGCTTTCTaGTGTCTCTTTACTTCTGACATGTCATGGGGGAAAAGTCAGATC +
Preference number: 1 (lower is better)
Translates to: QLTILSALWPDTNAF*CLFTSDMSWGKSQI
Trigger: GATCTGACTTTTCCCCCATGACATGTCAGAAGTAAAGAGACAGCAGAAAGCATTTGTGTCTGGCCACAGTGCAGAAAGTATTGTAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR GCA 90 bp TCATGTGGATTGGCTTCACTGAAGGGGCCCTTTGTTGTTAGCTGTTaGAATGGTTTTGAAGGTTCAGGGAGGTCTAGTTTCATAATATCA +
Preference number: 1 (lower is better)
Translates to: SCGLASLKGPFVVSC*NGFEGSGRSSFIIS
Trigger: TGATATTATGAAACTAGACCTCCCTGAACCTTCAAAACCATTGCAACAGCTAACAACAAAGGGCCCCTTCAGTGAAGCCAATCCACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 90 bp CCTTCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTaGTACCACAGAGCCAAACAGCAGGTAAAAATGCTAAGGATATTG +
Preference number: 1 (lower is better)
Translates to: PSEMEHLTPREIPMT*YHRAKQQVKMLRIL
Trigger: CAATATCCTTAGCATTTTTACCTGCTGTTTGGCTCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 90 bp CAAGAGAAACAAACTGATTCTTTGAGTCATGTGGATTGGCTTCACTaGAGGGGCCCTTTGTTGTTAGCTGTTGCAATGGTTTTGAAGGTT +
Preference number: 1 (lower is better)
Translates to: QEKQTDSLSHVDWLH*RGPLLLAVAMVLKV
Trigger: AACCTTCAAAACCATTGCAACAGCTAACAACAAAGGGCCCCTTCAGTGAAGCCAATCCACATGACTCAAAGAATCAGTTTGTTTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 90 bp CTTAGAATCACTACTTTCAATATCTTGCATGGTTTCATTTGCAGCTaGCTTGGAAAAGTCAGAAGGTGTAACCCCACAAGCTGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: LRITTFNILHGFICS*LGKVRRCNPTSCCC
Trigger: ACAGCAGCAGCTTGTGGGGTTACACCTTCTGACTTTTCCAAGTCAGCTGCAAATGAAACCATGCAAGATATTGAAAGTAGTGATTCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 90 bp GCCAATGGACTAATATTGAGTTCTAGACCAGCCTGGGCTAGAGTGTaGGACCCTGCTTTAAACAACAAAACCAATAAAGAAATGGGTATT +
Preference number: 1 (lower is better)
Translates to: ANGLILSSRPAWARV*DPALNNKTNKEMGI
Trigger: AATACCCATTTCTTTATTGGTTTTGTTGTTTAAAGCAGGGTCTCACACTCTAGCCCAGGCTGGTCTAGAACTCAATATTAGTCCATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 90 bp GTGATAAACCCTGAGACTGACCAGAAGAATAATTTTGAGACTCACTaGCTGATGGCAGGTCTCTTGTTTGAGCAGGATAATTCTCATTTG +
Preference number: 1 (lower is better)
Translates to: VINPETDQKNNFETH*LMAGLLFEQDNSHL
Trigger: CAAATGAGAATTATCCTGCTCAAACAAGAGACCTGCCATCAGTCAGTGAGTCTCAAAATTATTCTTCTGGTCAGTCTCAGGGTTTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 90 bp ACTACACTGTCTCCACTTATGCTCCGACTATTAGAGACAAACTCTTaGTTTCTGTTATTACTCAGTGCACTGTCAACAGCAATTTCCCTG +
Preference number: 1 (lower is better)
Translates to: TTLSPLMLRLLETNS*FLLLLSALSTAISL
Trigger: CAGGGAAATTGCTGTTGACAGTGCACTGAGTAATAACAGAAATCAAGAGTTTGTCTCTAATAGTCGGAGCATAAGTGGAGACAGTGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 90 bp AAATTAGTTGCCTTCTTAAGATCAGTGGCTACTGCATTATTGGACTaGCCACTTTGCTGGTTAAGTTGTGTCATTGAACCGACCATGTTT +
Preference number: 1 (lower is better)
Translates to: KLVAFLRSVATALLD*PLCWLSCVIEPTMF
Trigger: AAACATGGTCGGTTCAATGACACAACTTAACCAGCAAAGTGGCCAGTCCAATAATGCAGTAGCCACTGATCTTAAGAAGGCAACTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 90 bp CTCAGTGCACTGTCAACAGCAATTTCCCTGTCTTCTTTAGACTCATaGTTTATAGTCAACTGTTTCTTGAATGGGTCAGAACTTTGTTCC +
Preference number: 1 (lower is better)
Translates to: LSALSTAISLSSLDS*FIVNCFLNGSELCS
Trigger: GGAACAAAGTTCTGACCCATTCAAGAAACAGTTGACTATAAACCATGAGTCTAAAGAAGACAGGGAAATTGCTGTTGACAGTGCACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 90 bp TGCTGCTGGTTGAGGTCTTTAGTATTCAACCTTACCTGTGGAGTTTaGATTAAATTAGTTGCCTTCTTAAGATCAGTGGCTACTGCATTA +
Preference number: 1 (lower is better)
Translates to: CCWLRSLVFNLTCGV*IKLVAFLRSVATAL
Trigger: TAATGCAGTAGCCACTGATCTTAAGAAGGCAACTAATTTAATGCAAACTCCACAGGTAAGGTTGAATACTAAAGACCTCAACCAGCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 90 bp GCTCCGACTATTAGAGACAAACTCTTGATTTCTGTTATTACTCAGTaGACTGTCAACAGCAATTTCCCTGTCTTCTTTAGACTCATGGTT +
Preference number: 1 (lower is better)
Translates to: APTIRDKLLISVITQ*TVNSNFPVFFRLMV
Trigger: AACCATGAGTCTAAAGAAGACAGGGAAATTGCTGTTGACAGTGCACTGAGTAATAACAGAAATCAAGAGTTTGTCTCTAATAGTCGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 90 bp TCTATGTCTTCTATCTTTACCACAAATTCATCACGTTCCCTGTATTaGCCTTCACCTCCACTTTCAATATTTTCCTCATCTGTAAAACCT +
Preference number: 1 (lower is better)
Translates to: SMSSIFTTNSSRSLY*PSPPLSIFSSSVKP
Trigger: AGGTTTTACAGATGAGGAAAATATTGAAAGTGGAGGTGAAGGTCAATACAGGGAACGTGATGAATTTGTGGTAAAGATAGAAGACATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAAACAGGACTCAGCTATaGACAGGCCGAGGGCAACTG +
Preference number: 2 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCENRTQL*TGRGQL
Trigger: CAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTT...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAACTCAAGAGATCTGACTaGCTCTGCTTCCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCELKRSD*LCFPSA
Trigger: AGCACTTGGGAAGCAGAGGCAGTCAGATCTCTTGAG...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAACCAGCTCTCTATGTGTaGTTGAGGGATGAGGGTTGT +
Preference number: 2 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEPALYV*LRDEGC
Trigger: ACAACCCTCATCCCTCAAGCACACATAGAGAGCTGG...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 90 bp CTGTTGCGGACTCTGAACACGCTGTACTTGCAAGGATGCCTTTGCTaGTCCCAGGCTAGCCTGGAGAATTCCAGCCTGTTGAAGAATCTG +
Preference number: 2 (lower is better)
Translates to: LLRTLNTLYLQGCLC*SQASLENSSLLKNL
Trigger: CAGATTCTTCAACAGGCTGGAATTCTCCAGGCTAGCCTGGGACAAGCAAAGGCATCCTTGCAAGTACAGCGTGTTCAGAGTCCGCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATCAGCATTTTGGAGGCTaGGACAGGTGGGCTGCCATG +
Preference number: 2 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYQHFGG*DRWAAM
Trigger: CATGGCAGCCCACCTGTCTCAGCCTCCAAAATGCTG...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATGCCAGTGTAAAGCACTaGGCCACATCCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYASVKH*ATSPPS
Trigger: GGAGGGTGGGGATGTGGCTCAGTGCTTTACACTGGC...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGGCTCCCCCAAGTGTTaGAGGCAACAAACTAAATTG +
Preference number: 2 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEGSPKC*RQQTKL
Trigger: CAATTTAGTTTGTTGCCTTCAACACTTGGGGGAGCC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp GTGAAATGGTTTACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTGCAGTATGGCAGCAAAGGTCTaGTCACAGTTCCCCACGGCA +
Preference number: 2 (lower is better)
Translates to: VKWFTTGLSYEQAEGNCSMAAKV*SQFPTA
Trigger: TGCCGTGGGGAACTGTGACCAGACCTTTGCTGCCAT...ACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGTCTTATTCCACAGTGTaGGTCTTGGAACTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWSYSTV*VLELRL
Trigger: CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGA...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 90 bp AATGCTGATAGGCAGACAAAGTTGGTGGTGGAAGTGTCCCAGTGGTaGGCAAGGGTCCTGCAACAAACAGCTCAGTTGCTGCTGAGGAAT +
Preference number: 2 (lower is better)
Translates to: NADRQTKLVVEVSQW*ARVLQQTAQLLLRN
Trigger: ATTCCTCAGCAGCAACTGAGCTGTTTGTTGCAGGACCCTTGCCAACCACTGGGACACTTCCACCACCAACTTTGTCTGCCTATCAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 90 bp GGACTGCACAGCAGGCAGAAACTCTTGGGGCTGAGCAGAAGATCCTaGGGTCTGAGCATTTGGGGATGGATGCATAGAAGTATAACTTGG +
Preference number: 2 (lower is better)
Translates to: GLHSRQKLLGLSRRS*GLSIWGWMHRSITW
Trigger: CCAAGTTATACTTCTATGCATCCATCCCCAAATGCTCAGACCCAAGGATCTTCTGCTCAGCCCCAAGAGTTTCTGCCTGCTGTGCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAAATCTATGCTGCAAATaGCATGTACCTACACAGGGC +
Preference number: 2 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCENLCCK*HVPTQG
Trigger: GCCCTGTGTAGGTACATGTCATTTGCAGCATAGATT...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATCAGCTCAGTTGCTGCTaGGGAATGCATGCTGACAGG +
Preference number: 2 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYQLSCC*GMHADR
Trigger: CCTGTCAGCATGCATTCCTCAGCAGCAACTGAGCTG...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGTTGGACTGGCCACTTTaGTGGTTAAGTTGTGTCATT +
Preference number: 2 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWLDWPL*WLSCVI
Trigger: AATGACACAACTTAACCAGCAAAGTGGCCAGTCCAA...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATATAGAGAGGGGACTGTaGGGAAACGGGAAGGAGACC +
Preference number: 2 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYIERGL*GNGKET
Trigger: GGTCTCCTTCCCGTTTCCTCACAGTCCCCTCTCTAT...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TTGCCAACTGGTCTGAAGGAAGACTATCAAGTTCGATGGCTGTGGGGGATTCTGGTGGATTGGCTTCACTaGAGGGGCCCTTTGTTGTTA +
Preference number: 2 (lower is better)
Translates to: LPTGLKEDYQVRWLWGILVDWLH*RGPLLL
Trigger: TAACAACAAAGGGCCCCTTCAGTGAAGCCAATCCAC...CAGAATCCCCCACAGCCATCGAACTTGATAGTCTTCCTTCAGACCAGTTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGCTGCAAATTCTCTTTaGCCATCTCGAATTTCAGGA +
Preference number: 2 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEAANSL*PSRISG
Trigger: TCCTGAAATTCGAGATGGGCAAAGAGAATTTGCAGC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGATGGCAGCAAAGGTCTaGTCACAGTTCCCCACGGCA +
Preference number: 2 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLMAAKV*SQFPTA
Trigger: TGCCGTGGGGAACTGTGACCAGACCTTTGCTGCCAT...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAAGTATAACTTGGTGTTaGGGTAGAAACTGGCAAGCT +
Preference number: 2 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCESITWC*GRNWQA
Trigger: AGCTTGCCAGTTTCTACCCCAACACCAAGTTATACT...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAGCCTGGGCTAGAGTGTaGGACCCTGCTTTAAACAAC +
Preference number: 2 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKAWARV*DPALNN
Trigger: GTTGTTTAAAGCAGGGTCTCACACTCTAGCCCAGGC...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAACAGGTGGGCTGCCATaGATTTGGAGCCAATGGACT +
Preference number: 2 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKTGGLP*IWSQWT
Trigger: AGTCCATTGGCTCCAAATTCATGGCAGCCCACCTGT...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTAACAGGACTCAGCTATaGACAGGCCGAGGGCAACTG +
Preference number: 2 (lower is better)
Translates to: QDATHQITFHNLQYFLHCNRTQL*TGRGQL
Trigger: CAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTT...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCAACAGCAAACTCCTGTGCAGACTTAGTGGTTGTTTTAGAAGTCCTTAGAGTTGCCAGTGTAAAGCACTaGGCCACATCCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: STANSCADLVVVLEVLRVASVKH*ATSPPS
Trigger: GGAGGGTGGGGATGTGGCTCAGTGCTTTACACTGGC...AACTCTAAGGACTTCTAAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTATAGAGAGGGGACTGTaGGGAAACGGGAAGGAGACC +
Preference number: 2 (lower is better)
Translates to: QDATHQITFHNLQYFLHCIERGL*GNGKET
Trigger: GGTCTCCTTCCCGTTTCCTCACAGTCCCCTCTCTAT...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGACTGAGCAAGTTCTGCTaGGACCTGAGGGGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRLSKFC*DLRGLL
Trigger: CAGAAGACCCCTCAGGTCTCAGCAGAACTTGCTCAG...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTGGGCATGGCCAGCAGTaGAAGTGTACTCCTTCTAGG +
Preference number: 2 (lower is better)
Translates to: QDATHQITFHNLQYFLHCGHGQQ*KCTPSR
Trigger: CCTAGAAGGAGTACACTTGCACTGCTGGCCATGCCC...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAGACAAGGTCTCAGTATaGAGCTCTGGCTGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRDKVSV*SSGCPG
Trigger: TCCAGGACAGCCAGAGCTTCATACTGAGACCTTGTC...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTCTCTCTATGTGTGCTTaGGGGATGAGGGTTGTGGAG +
Preference number: 2 (lower is better)
Translates to: QDATHQITFHNLQYFLHCLSMCA*GMRVVE
Trigger: CTCCACAACCCTCATCCCTCAAGCACACATAGAGAG...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGCCTCTGCTAGAGGGCTaGATTATCTGTGACACTAGC +
Preference number: 2 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLPLLEG*IICDTS
Trigger: GCTAGTGTCACAGATAATGCAGCCCTCTAGCAGAGG...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGAAGGACTGGTTTCCATaGCAGCAAAGGTCTGGTCAC +
Preference number: 2 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLKDWFP*QQRSGH
Trigger: GTGACCAGACCTTTGCTGCCATGGAAACCAGTCCTT...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TTGCCAACTGGTCTGAAGGAAGACTATCAAGTTCGATGGCTGTGGGGGATTCTGTATAAGACTGGAACATaGCTGTGTCCTGTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: LPTGLKEDYQVRWLWGILYKTGT*LCPVLL
Trigger: GAGGAGAACAGGACACAGCCATGTTCCAGTCTTATA...CAGAATCCCCCACAGCCATCGAACTTGATAGTCTTCCTTCAGACCAGTTGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGGCTGCATCCCCTGGCTaGGGCATGGCCAGCAGTGCA +
Preference number: 2 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKAASPG*GMASSA
Trigger: TGCACTGCTGGCCATGCCCCAGCCAGGGGATGCAGC...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TTGCCAACTGGTCTGAAGGAAGACTATCAAGTTCGATGGCTGTGGGGGATTCTGACTAGGAAAAAGAGCTaGATTATAGGCTTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: LPTGLKEDYQVRWLWGILTRKKS*IIGLRG
Trigger: ACCCCTCAAGCCTATAATTCAGCTCTTTTTCCTAGT...CAGAATCCCCCACAGCCATCGAACTTGATAGTCTTCCTTCAGACCAGTTGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATCCAGTCAGTTGTGCCTaGATAGACTGGGTAACTGAA +
Preference number: 2 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYPVSCA*IDWVTE
Trigger: TTCAGTTACCCAGTCTATTCAGGCACAACTGACTGG...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp GAGCATTCACTTCCCCATCGGGTAGCCTTTGGCTTGATGATTCAAGAGATGCTTAATTTTGAGACTCACTaGCTGATGGCAGGTCTCTTG +
Preference number: 2 (lower is better)
Translates to: EHSLPHRVAFGLMIQEMLNFETH*LMAGLL
Trigger: CAAGAGACCTGCCATCAGTCAGTGAGTCTCAAAATT...AAGCATCTCTTGAATCATCAAGCCAAAGGCTACCCGATGGGGAAGTGAATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGGAAGATCCTTGGGTCTaGGCATTTGGGGATGGATGC +
Preference number: 2 (lower is better)
Translates to: DISYAVRINERCNSSEQQEDPWV*AFGDGC
Trigger: GCATCCATCCCCAAATGCTCAGACCCAAGGATCTTC...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TTGCCAACTGGTCTGAAGGAAGACTATCAAGTTCGATGGCTGTGGGGGATTCTGTTGCTCTGGATGATATaGCCATCCATCTGTAGGAAA +
Preference number: 2 (lower is better)
Translates to: LPTGLKEDYQVRWLWGILLLWMI*PSICRK
Trigger: TTTCCTACAGATGGATGGTCATATCATCCAGAGCAA...CAGAATCCCCCACAGCCATCGAACTTGATAGTCTTCCTTCAGACCAGTTGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATCTCAGTATGAAGCTCTaGCTGTCCTGGAGCTATGTA +
Preference number: 2 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYLSMKL*LSWSYV
Trigger: TACATAGCTCCAGGACAGCCAGAGCTTCATACTGAG...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGAGTGCCTATACCCACTaGGCCATCAAACTGTATCAG +
Preference number: 2 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLSAYTH*AIKLYQ
Trigger: CTGATACAGTTTGATGGCCCAGTGGGTATAGGCACT...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATTCAGGTTGTCAAGCTTaGCTGAAAGTGCCTATACCC +
Preference number: 2 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYSGCQA*LKVPIP
Trigger: GGGTATAGGCACTTTCAGCCAAGCTTGACAACCTGA...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAGCACCAAAGGTGAGGTaGTCGCAAAGTTTCTATTGC +
Preference number: 2 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKAPKVR*SQSFYC
Trigger: GCAATAGAAACTTTGCGACCACCTCACCTTTGGTGC...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATACTGAAGGCCGCTGGTaGTGTTTAATAACGCTACAT +
Preference number: 2 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYTEGRW*CLITLH
Trigger: ATGTAGCGTTATTAAACACCACCAGCGGCCTTCAGT...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCAACAGCAAACTCCTGTGCAGACTTAGTGGTTGTTTTAGAAGTCCTTAGAGTTCTCGAACAGCAAGAGTaGAGAACTGCTGCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: STANSCADLVVVLEVLRVLEQQE*RTAAWA
Trigger: GGCCCAAGCAGCAGTTCTCCACTCTTGCTGTTCGAG...AACTCTAAGGACTTCTAAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGACTCCACTTCCAGTTCTaGGAGTTAGGAAAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRLHFQF*ELGKLC
Trigger: ACACAGCTTTCCTAACTCTCAGAACTGGAAGTGGAG...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAACTGTGGCTTTCCTACTaGAGCTGCTATGGAGTTAAA +
Preference number: 2 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKLWLSY*SCYGVK
Trigger: TTTAACTCCATAGCAGCTTCAGTAGGAAAGCCACAG...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCTGTATCTGAGATGAGGCACTCATTATTTGATCATGCTGTTGCTGAACCTTCGCTCAAGAGATCTGACTaGCTCTGCTTCCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: SVSEMRHSLFDHAVAEPSLKRSD*LCFPSA
Trigger: AGCACTTGGGAAGCAGAGGCAGTCAGATCTCTTGAG...CGAAGGTTCAGCAACAGCATGATCAAATAATGAGTGCCTCATCTCAGATACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCAACAGCAAACTCCTGTGCAGACTTAGTGGTTGTTTTAGAAGTCCTTAGAGTTGGTTGGCAAGGGTCCTaGAACAAACAGCTCAGTTGC +
Preference number: 2 (lower is better)
Translates to: STANSCADLVVVLEVLRVGWQGS*NKQLSC
Trigger: GCAACTGAGCTGTTTGTTGCAGGACCCTTGCCAACC...AACTCTAAGGACTTCTAAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTGCCCAGGCGCTCAAATaGCAAAGCAGTCGGAACAGT +
Preference number: 2 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIAQALK*QSSRNS
Trigger: ACTGTTCCGACTGCTTTGGCATTTGAGCGCCTGGGC...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCATGGCAGCAAAGGTCTaGTCACAGTTCCCCACGGCA +
Preference number: 2 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFMAAKV*SQFPTA
Trigger: TGCCGTGGGGAACTGTGACCAGACCTTTGCTGCCAT...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATATACTTTCTGCACTGTaGCCAGACACAAATGCTTTC +
Preference number: 2 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYILSAL*PDTNAF
Trigger: GAAAGCATTTGTGTCTGGCCACAGTGCAGAAAGTAT...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAAGTGCCTATACCCACTaGGCCATCAAACTGTATCAG +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRSAYTH*AIKLYQ
Trigger: CTGATACAGTTTGATGGCCCAGTGGGTATAGGCACT...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 90 bp AAGACGACTGCCTGGATGGTTCCTGAAAATTACCAATACTTGCACTaGATAGGTAGCTATGTAAGGGATGCTGTGAACCAGTCAGTTGTG +
Preference number: 2 (lower is better)
Translates to: KTTAWMVPENYQYLH*IGSYVRDAVNQSVV
Trigger: CACAACTGACTGGTTCACAGCATCCCTTACATAGCTACCTATCAAGTGCAAGTATTGGTAATTTTCAGGAACCATCCAGGCAGTCGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTGTATCTGAGATGAGGCACTCATTATTTGATCATGCTGTTGCTGAACCTTCGCTCCACTTCCAGTTCTaGGAGTTAGGAAAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: SVSEMRHSLFDHAVAEPSLHFQF*ELGKLC
Trigger: ACACAGCTTTCCTAACTCTCAGAACTGGAAGTGGAG...CGAAGGTTCAGCAACAGCATGATCAAATAATGAGTGCCTCATCTCAGATACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTCAGCATTTTGGAGGCTaGGACAGGTGGGCTGCCATG +
Preference number: 2 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTQHFGG*DRWAAM
Trigger: CATGGCAGCCCACCTGTCTCAGCCTCCAAAATGCTG...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp GTGAAATGGTTTACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTGCAGTAATTTGTGCTTGACCTaGTATTACAGAACTCTGGTT +
Preference number: 2 (lower is better)
Translates to: VKWFTTGLSYEQAEGNCSNLCLT*YYRTLV
Trigger: AACCAGAGTTCTGTAATATCAGGTCAAGCACAAATT...ACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAATTTTGCCAACTGGTCTaGAGGAAGACTATCAAGTTC +
Preference number: 2 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKFCQLV*RKTIKF
Trigger: GAACTTGATAGTCTTCCTTCAGACCAGTTGGCAAAA...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAAGAATAAACGAGAGGTaGAATTCCTCTGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRRINER*NSSEQQ
Trigger: CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCT...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACGCAAGAGTGGAGAACTaGTGCTTGGGCCCACACTTC +
Preference number: 2 (lower is better)
Translates to: VFHISVHGIMDQLKILDYARVEN*CLGPHF
Trigger: GAAGTGTGGGCCCAAGCAGCAGTTCTCCACTCTTGC...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTATACTTTCTGCACTGTaGCCAGACACAAATGCTTTC +
Preference number: 2 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCILSAL*PDTNAF
Trigger: GAAAGCATTTGTGTCTGGCCACAGTGCAGAAAGTAT...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATCCTTTTCTTTGGTGGTaGCTCAGCCTTTATTTTGAG +
Preference number: 2 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYPFLWW*LSLYFE
Trigger: CTCAAAATAAAGGCTGAGCCACCACCAAAGAAAAGG...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 90 bp AGGATAAAGACGACTGCCTGGATGGTTCCTGAAAATTACCAATACTaGCACTTGATAGGTAGCTATGTAAGGGATGCTGTGAACCAGTCA +
Preference number: 2 (lower is better)
Translates to: RIKTTAWMVPENYQY*HLIGSYVRDAVNQS
Trigger: TGACTGGTTCACAGCATCCCTTACATAGCTACCTATCAAGTGCAAGTATTGGTAATTTTCAGGAACCATCCAGGCAGTCGTCTTTATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 90 bp CTGATGTATGAGGAAGAGCCTGATGACTCTGCCCTAAAGCAGGATTaGGAATCTGTATCTGAGATGAGGCACTCATTATTTGATCATGCT +
Preference number: 2 (lower is better)
Translates to: LMYEEEPDDSALKQD*ESVSEMRHSLFDHA
Trigger: AGCATGATCAAATAATGAGTGCCTCATCTCAGATACAGATTCCAAATCCTGCTTTAGGGCAGAGTCATCAGGCTCTTCCTCATACATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 90 bp GAATCACTACTTTCAATATCTTGCATGGTTTCATTTGCAGCTGACTaGGAAAAGTCAGAAGGTGTAACCCCACAAGCTGCTGCTGTAGCT +
Preference number: 2 (lower is better)
Translates to: ESLLSISCMVSFAAD*EKSEGVTPQAAAVA
Trigger: AGCTACAGCAGCAGCTTGTGGGGTTACACCTTCTGACTTTTCCAAGTCAGCTGCAAATGAAACCATGCAAGATATTGAAAGTAGTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACGACAAGGTCTCAGTATaGAGCTCTGGCTGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: VFHISVHGIMDQLKILDYDKVSV*SSGCPG
Trigger: TCCAGGACAGCCAGAGCTTCATACTGAGACCTTGTC...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTAACAGGACTCAGCTATaGACAGGCCGAGGGCAACTG +
Preference number: 2 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCANRTQL*TGRGQL
Trigger: CAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTT...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCAACAGCAAACTCCTGTGCAGACTTAGTGGTTGTTTTAGAAGTCCTTAGAGTTCTCAGTATGAAGCTCTaGCTGTCCTGGAGCTATGTA +
Preference number: 2 (lower is better)
Translates to: STANSCADLVVVLEVLRVLSMKL*LSWSYV
Trigger: TACATAGCTCCAGGACAGCCAGAGCTTCATACTGAG...AACTCTAAGGACTTCTAAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGTATAAGACTGGAACATaGCTGTGTCCTGTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: DISYAVRINERCNSSEQQYKTGT*LCPVLL
Trigger: GAGGAGAACAGGACACAGCCATGTTCCAGTCTTATA...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAGACTGGCCACTTTGCTaGTTAAGTTGTGTCATTGAA +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRDWPLC*LSCVIE
Trigger: TTCAATGACACAACTTAACCAGCAAAGTGGCCAGTC...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 90 bp ACCTTCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTaGGTACCACAGAGCCAAACAGCAGGTAAAAATGCTAAGGATATT +
Preference number: 2 (lower is better)
Translates to: TFRNGTFDPERNSHD*VPQSQTAGKNAKDI
Trigger: AATATCCTTAGCATTTTTACCTGCTGTTTGGCTCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 90 bp ACGATGTATACACACTTGAGTCAAGCTTCCTTTCAGCATAAGACTTaGGATCAGGAGAAGGTATGCTACTTTGTAATGTCTGACCACGAG +
Preference number: 2 (lower is better)
Translates to: TMYTHLSQASFQHKT*DQEKVCYFVMSDHE
Trigger: CTCGTGGTCAGACATTACAAAGTAGCATACCTTCTCCTGATCCAAAGTCTTATGCTGAAAGGAAGCTTGACTCAAGTGTGTATACATCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTCTCCACTTCCAGTTCTaGGAGTTAGGAAAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: LFSSAYKMKSQDSLANSILHFQF*ELGKLC
Trigger: ACACAGCTTTCCTAACTCTCAGAACTGGAAGTGGAG...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTGCCTGGGCTAGAGTGTaGGACCCTGCTTTAAACAAC +
Preference number: 2 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTAWARV*DPALNN
Trigger: GTTGTTTAAAGCAGGGTCTCACACTCTAGCCCAGGC...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATAAAAACATGCATTTGTaGACACAGATGACAACAGCT +
Preference number: 2 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYKNMHL*TQMTTA
Trigger: AGCTGTTGTCATCTGTGTTCACAAATGCATGTTTTT...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATCTGAGGAATGCATGCTaGCAGGATGGAGCCCTGAAT +
Preference number: 2 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDLRNAC*QDGALN
Trigger: ATTCAGGGCTCCATCCTGTCAGCATGCATTCCTCAG...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTTGAAGCACCAAAGGTaGGGTGGTCGCAAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFLKHQR*GGRKVS
Trigger: AGAAACTTTGCGACCACCTCACCTTTGGTGCTTCAA...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGTGTTCCTGGATTTCCTaGCCCAGTCCAACCATGGCA +
Preference number: 2 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKCSWIS*PSPTMA
Trigger: TGCCATGGTTGGACTGGGTCAGGAAATCCAGGAACA...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACCCTCTGCTAGAGGGCTaGATTATCTGTGACACTAGC +
Preference number: 2 (lower is better)
Translates to: VFHISVHGIMDQLKILDYPLLEG*IICDTS
Trigger: GCTAGTGTCACAGATAATGCAGCCCTCTAGCAGAGG...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAGACACAAATGCTTTCTaGTGTCTCTTTACTTCTGAC +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRDTNAF*CLFTSD
Trigger: GTCAGAAGTAAAGAGACAGCAGAAAGCATTTGTGTC...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAAGGCATGCACTACTATaGCTGGCAATAATTTTTATG +
Preference number: 2 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKRHALL*LAIIFM
Trigger: CATAAAAATTATTGCCAGGCATAGTAGTGCATGCCT...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAAGTTGCTGCTGAGGAATaGATGCTGACAGGATGGAGC +
Preference number: 2 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEVAAEE*MLTGWS
Trigger: GCTCCATCCTGTCAGCATGCATTCCTCAGCAGCAAC...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAATGTAAAACCTTCTATTaGAACTGTGTCCTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKCKTFY*NCVLSF
Trigger: AAAGGACAGGACACAGTTGCAATAGAAGGTTTTACA...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAAACAGCAAACTCCTGTaGAGACTTAGTGGTTGTTTT +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRNSKLL*RLSGCF
Trigger: AAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTT...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTATAAAGACGACTGCCTaGATGGTTCCTGAAAATTAC +
Preference number: 2 (lower is better)
Translates to: QDATHQITFHNLQYFLHCIKTTA*MVPENY
Trigger: GTAATTTTCAGGAACCATCCAGGCAGTCGTCTTTAT...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTGGTGAGAGTTATTTCTaGTTACACTCTGAGAATACC +
Preference number: 2 (lower is better)
Translates to: QDATHQITFHNLQYFLHCGESYF*LHSENT
Trigger: GGTATTCTCAGAGTGTAACCAGAAATAACTCTCACC...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAATGAGAGAATGCTGCTaGTTGAGGTCTTTAGTATTC +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRMRECC*LRSLVF
Trigger: GAATACTAAAGACCTCAACCAGCAGCATTCTCTCAT...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 90 bp GAGAGTTATTTCTGGTTACACTCTGAGAATACCTATCATCTGCCTTaGATGTCTTATAAACTGACTCTTGAGCATTCACTTCCCCATCGG +
Preference number: 2 (lower is better)
Translates to: ESYFWLHSENTYHLP*MSYKLTLEHSLPHR
Trigger: CCGATGGGGAAGTGAATGCTCAAGAGTCAGTTTATAAGACATCAAAGGCAGATGATAGGTATTCTCAGAGTGTAACCAGAAATAACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGCATGGCAAAAGGGTATaGACAAAAATGTCCACTTCA +
Preference number: 2 (lower is better)
Translates to: DISYAVRINERCNSSEQQHGKRV*TKMSTS
Trigger: TGAAGTGGACATTTTTGTTCATACCCTTTTGCCATG...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTAATAGACTGGGTAACTaGAGGCCGCTGGTGGTGTTT +
Preference number: 2 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCANRLGN*RPLVVF
Trigger: AAACACCACCAGCGGCCTTCAGTTACCCAGTCTATT...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTGTATCTGAGATGAGGCACTCATTATTTGATCATGCTGTTGCTGAACCTTCGAATTTTGGGACTGACTaGCTGATAAAAGGCTTGGTA +
Preference number: 2 (lower is better)
Translates to: SVSEMRHSLFDHAVAEPSNFGTD*LIKGLV
Trigger: TACCAAGCCTTTTATCAGTCAGTCAGTCCCAAAATT...CGAAGGTTCAGCAACAGCATGATCAAATAATGAGTGCCTCATCTCAGATACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAACCTCTGCTAGAGGGCTaGATTATCTGTGACACTAGC +
Preference number: 2 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEPLLEG*IICDTS
Trigger: GCTAGTGTCACAGATAATGCAGCCCTCTAGCAGAGG...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTCTCAAGAGATCTGACTaGCTCTGCTTCCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCALKRSD*LCFPSA
Trigger: AGCACTTGGGAAGCAGAGGCAGTCAGATCTCTTGAG...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTACCACGAGTAGAGGATaGAAAAGAGGACTGCACAGC +
Preference number: 2 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTTTSRG*KRGLHS
Trigger: GCTGTGCAGTCCTCTTTTGCATCCTCTACTCGTGGT...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACGTTTTGACCTCTGGCTaGTTTTCCTCCACTTCCTTG +
Preference number: 2 (lower is better)
Translates to: VFHISVHGIMDQLKILDYVLTSG*FSSTSL
Trigger: CAAGGAAGTGGAGGAAAAGCAGCCAGAGGTCAAAAC...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAGAAAGTTTCCTTCATTaGTCTTGTGTTCAGAAAACG +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRESFLH*SCVQKT
Trigger: CGTTTTCTGAACACAAGAGCAATGAAGGAAACTTTC...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATAAGGACTGGTTTCCATaGCAGCAAAGGTCTGGTCAC +
Preference number: 2 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDKDWFP*QQRSGH
Trigger: GTGACCAGACCTTTGCTGCCATGGAAACCAGTCCTT...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 90 bp TACTACACTGTCTCCACTTATGCTCCGACTATTAGAGACAAACTCTaGATTTCTGTTATTACTCAGTGCACTGTCAACAGCAATTTCCCT +
Preference number: 2 (lower is better)
Translates to: YYTVSTYAPTIRDKL*ISVITQCTVNSNFP
Trigger: AGGGAAATTGCTGTTGACAGTGCACTGAGTAATAACAGAAATCAAGAGTTTGTCTCTAATAGTCGGAGCATAAGTGGAGACAGTGTAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATCCTGGCCTTCACTTGTaGAATGGTTTACAACAGGAC +
Preference number: 2 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDPGLHL*NGLQQD
Trigger: GTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGG...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCAACAGCAAACTCCTGTGCAGACTTAGTGGTTGTTTTAGAAGTCCTTAGAGTTAACAAACTGATTCTTTaGGTCATGTGGATTGGCTTC +
Preference number: 2 (lower is better)
Translates to: STANSCADLVVVLEVLRVNKLIL*VMWIGF
Trigger: GAAGCCAATCCACATGACTCAAAGAATCAGTTTGTT...AACTCTAAGGACTTCTAAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCTGTATCTGAGATGAGGCACTCATTATTTGATCATGCTGTTGCTGAACCTTCGAGGCATGCACTACTATaGCTGGCAATAATTTTTATG +
Preference number: 2 (lower is better)
Translates to: SVSEMRHSLFDHAVAEPSRHALL*LAIIFM
Trigger: CATAAAAATTATTGCCAGGCATAGTAGTGCATGCCT...CGAAGGTTCAGCAACAGCATGATCAAATAATGAGTGCCTCATCTCAGATACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGTACTTAATGCAGAACTaGCCAGGCGCTCAAATGCCA +
Preference number: 2 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKYLMQN*PGAQMP
Trigger: TGGCATTTGAGCGCCTGGGCAGTTCTGCATTAAGTA...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCTGTATCTGAGATGAGGCACTCATTATTTGATCATGCTGTTGCTGAACCTTCGAATGCCTGTAATTTTTaGACTGGAAACTCATCTTGC +
Preference number: 2 (lower is better)
Translates to: SVSEMRHSLFDHAVAEPSNACNF*TGNSSC
Trigger: GCAAGATGAGTTTCCAGTGCAAAAATTACAGGCATT...CGAAGGTTCAGCAACAGCATGATCAAATAATGAGTGCCTCATCTCAGATACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGCTTACCTGTGGAGTTTaGATTAAATTAGTTGCCTTC +
Preference number: 2 (lower is better)
Translates to: DISYAVRINERCNSSEQQLTCGV*IKLVAF
Trigger: GAAGGCAACTAATTTAATGCAAACTCCACAGGTAAG...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATTCAGGTTGTCAAGCTTaGCTGAAAGTGCCTATACCC +
Preference number: 2 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDSGCQA*LKVPIP
Trigger: GGGTATAGGCACTTTCAGCCAAGCTTGACAACCTGA...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTGTCTTATTTGGGCACTaGACAGTAACACTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIVLFGH*TVTLLS
Trigger: AGAAAGCAGTGTTACTGTCCAGTGCCCAAATAAGAC...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGACCAATACTTCCAATTTaGCAAAACCATAGGAAAATG +
Preference number: 2 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRPILPI*QNHRKM
Trigger: CATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGG...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCAACAGCAAACTCCTGTGCAGACTTAGTGGTTGTTTTAGAAGTCCTTAGAGTTCATTTGAATCAGCGATaGACACAAACACACAAACAC +
Preference number: 2 (lower is better)
Translates to: STANSCADLVVVLEVLRVHLNQR*TQTHKH
Trigger: GTGTTTGTGTGTTTGTGTCCATCGCTGATTCAAATG...AACTCTAAGGACTTCTAAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGATAGGCAGACAAAGTTaGTGGTGGAAGTGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKIGRQS*WWKCPS
Trigger: ACTGGGACACTTCCACCACCAACTTTGTCTGCCTAT...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACGTAACTGAAGGCCGCTaGTGGTGTTTAATAACGCTA +
Preference number: 2 (lower is better)
Translates to: VFHISVHGIMDQLKILDYVTEGR*WCLITL
Trigger: TAGCGTTATTAAACACCACCAGCGGCCTTCAGTTAC...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCAACAGCAAACTCCTGTGCAGACTTAGTGGTTGTTTTAGAAGTCCTTAGAGTTCATAGAAGTATAACTTaGTGTTGGGGTAGAAACTGG +
Preference number: 2 (lower is better)
Translates to: STANSCADLVVVLEVLRVHRSIT*CWGRNW
Trigger: CCAGTTTCTACCCCAACACCAAGTTATACTTCTATG...AACTCTAAGGACTTCTAAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTCTGTCTCTTTACTTCTaGCATGTCATGGGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: SHSPIYKAKLILAPNESSLSLYF*HVMGEK
Trigger: CTTTTCCCCCATGACATGTCAGAAGTAAAGAGACAG...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTCTGTCTCTTTACTTCTaGCATGTCATGGGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTLSLYF*HVMGEK
Trigger: CTTTTCCCCCATGACATGTCAGAAGTAAAGAGACAG...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTAATCTATGCTGCAAATaGCATGTACCTACACAGGGC +
Preference number: 2 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTNLCCK*HVPTQG
Trigger: GCCCTGTGTAGGTACATGTCATTTGCAGCATAGATT...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGCAACAGCTGTGTATCTaGGTTAATGCATATCCTGGG +
Preference number: 2 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKQQLCI*VNAYPG
Trigger: CCCAGGATATGCATTAACTCAGATACACAGCTGTTG...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp TCAACAGCAAACTCCTGTGCAGACTTAGTGGTTGTTTTAGAAGTCCTTAGAGTTTGTAGTGTTAAAAGATaGATCTTGAAGCACCAAAGG +
Preference number: 2 (lower is better)
Translates to: STANSCADLVVVLEVLRVCSVKR*ILKHQR
Trigger: CCTTTGGTGCTTCAAGATTCATCTTTTAACACTACA...AACTCTAAGGACTTCTAAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTCGATATGTTGAAGACTaGGGTGGTACGCTGTTACTT +
Preference number: 2 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCARYVED*GGTLLL
Trigger: AAGTAACAGCGTACCACCTCAGTCTTCAACATATCG...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCGACACAAATGCTTTCTaGTGTCTCTTTACTTCTGAC +
Preference number: 2 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFDTNAF*CLFTSD
Trigger: GTCAGAAGTAAAGAGACAGCAGAAAGCATTTGTGTC...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGAGAATAAACGAGAGGTaGAATTCCTCTGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKRINER*NSSEQQ
Trigger: CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCT...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTGCAATTTCTCAACCCTaGTGGACCTATAAACCTGTG +
Preference number: 2 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTAISQP*WTYKPV
Trigger: CACAGGTTTATAGGTCCAGCAGGGTTGAGAAATTGC...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGTCTTATTCCACAGTGTaGGTCTTGGAACTCAGGTTG +
Preference number: 2 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKSYSTV*VLELRL
Trigger: CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGA...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAAGTCGGAACAGTTCCCTaGGAAGTCTTAATTTGTAGC +
Preference number: 2 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEVGTVP*EVLICS
Trigger: GCTACAAATTAAGACTTCCCAGGGAACTGTTCCGAC...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTTGTAGCAAAGGGTCATaGGGGCTTAAAATTCCATTG +
Preference number: 2 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCACSKGS*GLKIPL
Trigger: CAATGGAATTTTAAGCCCTCATGACCCTTTGCTACA...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGGGACCTATAAACCTGTaGATGAACAATAGATGGCAC +
Preference number: 2 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKGPINL*MNNRWH
Trigger: GTGCCATCTATTGTTCATTCACAGGTTTATAGGTCC...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTATACTTTCTGCACTGTaGCCAGACACAAATGCTTTC +
Preference number: 2 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCAILSAL*PDTNAF
Trigger: GAAAGCATTTGTGTCTGGCCACAGTGCAGAAAGTAT...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATGACTTCTGCAGAAGTTaGTTCTCTTATTCCACAGTG +
Preference number: 2 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDDFCRS*FSYSTV
Trigger: CACTGTGGAATAAGAGAACCAACTTCTGCAGAAGTC...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTGACTTCTGCAGAAGTTaGTTCTCTTATTCCACAGTG +
Preference number: 2 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTDFCRS*FSYSTV
Trigger: CACTGTGGAATAAGAGAACCAACTTCTGCAGAAGTC...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTCTGAATTCACATGCCTaGCATTTAATGACTGCTGAT +
Preference number: 2 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCALNSHA*HLMTAD
Trigger: ATCAGCAGTCATTAAATGTCAGGCATGTGAATTCAG...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTAGAGATGCTTGTGACTaGAATGCCTGTAATTTTTGC +
Preference number: 2 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCARDACD*NACNFC
Trigger: GCAAAAATTACAGGCATTGCAGTCACAAGCATCTCT...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR TCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTTTCTTGCTGATTGGATaGATAACTAAGTGTCTGGTT +
Preference number: 2 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCAFLLIG*ITKCLV
Trigger: AACCAGACACTTAGTTATTCATCCAATCAGCAAGAA...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTAGGCATGCACTACTATaGCTGGCAATAATTTTTATG +
Preference number: 2 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCARHALL*LAIIFM
Trigger: CATAAAAATTATTGCCAGGCATAGTAGTGCATGCCT...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR GCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGAGGTTGGAATTTATCTaGTTCAAGGAGAATAAATGG +
Preference number: 2 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKRLEFI*FKENKW
Trigger: CCATTTATTCTCCTTGAAGCAGATAAATTCCAACCT...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGAGAAGGTACTTTAGTTaGTATAGTTTGACTAGGTGT +
Preference number: 2 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKRRYFS*YSLTRC
Trigger: ACACCTAGTCAAACTATACCAACTAAAGTACCTTCT...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 72 bp ACTGGCTGCATCCCCTGGCTGGGGCATGGCCAGCAGTaGAAGTGTACTCCTTCTAGGGTTCACCAACACACC +
Preference number: 3 (lower is better)
Translates to: TGCIPWLGHGQQ*KCTPSRVHQHT
Trigger: GGTGTGTTGGTGAACCCTAGAAGGAGTACACTTGCACTGCTGGCCATGCCCCAGCCAGGGGATGCAGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGGCAAGGAGGCCCCTTaGGCAACCAGTTTTCTGGGG +
Preference number: 3 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEGKEAP*ATSFLG
Trigger: CCCCAGAAAACTGGTTGCCAAAGGGGCCTCCTTGCC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGTGGAGAACTGCTGCTaGGGCCCACACTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEVENCC*GPHFRK
Trigger: CTTCCTGAAGTGTGGGCCCAAGCAGCAGTTCTCCAC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 72 bp CACAGAATTGCACAGCTCCACACCATTTCCCGGACATaGAAAAGGAGTCCACAGGGCAGGGTGCAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: HRIAQLHTISRT*KRSPQGRVQLL
Trigger: CAGCAGCTGCACCCTGCCCTGTGGACTCCTTTTGCATGTCCGGGAAATGGTGTGGAGCTGTGCAATTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR GCA 72 bp CGGACTCTGAACACGCTGTACTTGCAAGGATGCCTTTaGTTGTCCCAGGCTAGCCTGGAGAATTCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: RTLNTLYLQGCL*LSQASLENSSL
Trigger: CAGGCTGGAATTCTCCAGGCTAGCCTGGGACAAGCAAAGGCATCCTTGCAAGTACAGCGTGTTCAGAGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 72 bp GGCAGACAAAGTTGGTGGTGGAAGTGTCCCAGTGGTTaGCAAGGGTCCTGCAACAAACAGCTCAGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: GRQSWWWKCPSG*QGSCNKQLSCC
Trigger: GCAGCAACTGAGCTGTTTGTTGCAGGACCCTTGCCAACCACTGGGACACTTCCACCACCAACTTTGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp AGGTGGGGGACAGAACGTACGGGTGGTTTGGATTCCTaGTCGTCTGGTTCTGTTAGGTACTCGAACAGCAAG +
Preference number: 3 (lower is better)
Translates to: RWGTERTGGLDS*SSGSVRYSNSK
Trigger: CTTGCTGTTCGAGTACCTAACAGAACCAGACGATCAGGAATCCAAACCACCCGTACGTTCTGTCCCCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 72 bp ACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTaGAGTTCACAAGGGAACAGAAAGCTAGGCATGGTG +
Preference number: 3 (lower is better)
Translates to: TTGLSYEQAEGN*SSQGNRKLGMV
Trigger: CACCATGCCTAGCTTTCTGTTCCCTTGTGAACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CCA 72 bp CCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTaGCTGAAAGTGCCTATACCCACTGGGCCATCAAAC +
Preference number: 3 (lower is better)
Translates to: PQCGSWNSGCQA*LKVPIPTGPSN
Trigger: GTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CCA 72 bp CTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTaGCCTTCACTTGTGAAATGGTTTACAACAGGACTC +
Preference number: 3 (lower is better)
Translates to: LSSRVLREAHRT*PSLVKWFTTGL
Trigger: GAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CCA 72 bp GATAGGCAGACAAAGTTGGTGGTGGAAGTGTCCCAGTaGTTGGCAAGGGTCCTGCAACAAACAGCTCAGTTG +
Preference number: 3 (lower is better)
Translates to: DRQTKLVVEVSQ*LARVLQQTAQL
Trigger: CAACTGAGCTGTTTGTTGCAGGACCCTTGCCAACCACTGGGACACTTCCACCACCAACTTTGTCTGCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAACTGAGCAGCAGGGTCTaGAGGGAAGCTCACAGGACC +
Preference number: 3 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKLSSRV*REAHRT
Trigger: GGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAG...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGTGCATGCTTTATCATTaGACAGTCACCCCACAGTTT +
Preference number: 3 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWCMLYH*TVTPQF
Trigger: AAACTGTGGGGTGACTGTCAAATGATAAAGCATGCA...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTCTGAGCAGCAGGGTCTaGAGGGAAGCTCACAGGACC +
Preference number: 3 (lower is better)
Translates to: QDATHQITFHNLQYFLHCLSSRV*REAHRT
Trigger: GGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAG...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 72 bp CTATGTAAGGGATGCTGTGAACCAGTCAGTTGTGCCTaGATAGACTGGGTAACTGAAGGCCGCTGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: LCKGCCEPVSCA*IDWVTEGRWWC
Trigger: ACACCACCAGCGGCCTTCAGTTACCCAGTCTATTCAGGCACAACTGACTGGTTCACAGCATCCCTTACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 72 bp GCAGGGGAATGCTACAAGAGGCCTCTGCTAGAGGGCTaGATTATCTGTGACACTAGCCTTCCACACTTCATT +
Preference number: 3 (lower is better)
Translates to: AGECYKRPLLEG*IICDTSLPHFI
Trigger: AATGAAGTGTGGAAGGCTAGTGTCACAGATAATGCAGCCCTCTAGCAGAGGCCTCTTGTAGCATTCCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CCA 72 bp AGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAATaGTTTACAACAGGACTCAGCTATGAACAGGCCGAG +
Preference number: 3 (lower is better)
Translates to: REAHRTWPSLVK*FTTGLSYEQAE
Trigger: CTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CCA 72 bp ACCTTCATCGCAGCTTTCCAAGGAAGGGGAAGTGTATaGTACATACACATCTGTCCCTCTGGGGTTCTGTCG +
Preference number: 3 (lower is better)
Translates to: TFIAAFQGRGSV*YIHICPSGVLS
Trigger: CGACAGAACCCCAGAGGGACAGATGTGTATGTACCATACACTTCCCCTTCCTTGGAAAGCTGCGATGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp GCTTGTCCCAGGCTAGCCTGGAGAATTCCAGCCTGTTaGAGAATCTGTAAGTCACAGGCAGAGTCTAAAAGG +
Preference number: 3 (lower is better)
Translates to: ACPRLAWRIPAC*RICKSQAESKR
Trigger: CCTTTTAGACTCTGCCTGTGACTTACAGATTCTTCAACAGGCTGGAATTCTCCAGGCTAGCCTGGGACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 72 bp ATTTGGGGATGGATGCATAGAAGTATAACTTGGTGTTaGGGTAGAAACTGGCAAGCTCTGACCCCGAGAGGC +
Preference number: 3 (lower is better)
Translates to: IWGWMHRSITWC*GRNWQALTPRG
Trigger: GCCTCTCGGGGTCAGAGCTTGCCAGTTTCTACCCCAACACCAAGTTATACTTCTATGCATCCATCCCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAGCTCTCTATGTGTGCTaGAGGGATGAGGGTTGTGGA +
Preference number: 3 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKALYVC*RDEGCG
Trigger: TCCACAACCCTCATCCCTCAAGCACACATAGAGAGC...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTGAGCTGAGCGATATGTaGAAGACTGAGGTGGTACGC +
Preference number: 3 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCELSDM*KTEVVR
Trigger: GCGTACCACCTCAGTCTTCAACATATCGCTCAGCTC...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTCAGATGCACCAGGAGTaGCCACAGGCAGAGCTTCTA +
Preference number: 3 (lower is better)
Translates to: QDATHQITFHNLQYFLHCQMHQE*PQAELL
Trigger: TAGAAGCTCTGCCTGTGGCAACTCCTGGTGCATCTG...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp GGAGCTGCTGTTGAGGATGTTCACCGTTGCTCTGGATaGTATGACCATCCATCTGTAGGAAAGGATGGACTA +
Preference number: 3 (lower is better)
Translates to: GAAVEDVHRCSG*YDHPSVGKDGL
Trigger: TAGTCCATCCTTTCCTACAGATGGATGGTCATATCATCCAGAGCAACGGTGAACATCCTCAACAGCAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp TATTGCAACTGTGTCCTGTCCTTTTGCCAACTGGTCTaGAGGAAGACTATCAAGTTCGATGGCTGTGGGGGA +
Preference number: 3 (lower is better)
Translates to: YCNCVLSFCQLV*RKTIKFDGCGG
Trigger: TCCCCCACAGCCATCGAACTTGATAGTCTTCCTTCAGACCAGTTGGCAAAAGGACAGGACACAGTTGCAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 72 bp TTGGGGCTGAGCAGAAGATCCTTGGGTCTGAGCATTTaGGGATGGATGCATAGAAGTATAACTTGGTGTTGG +
Preference number: 3 (lower is better)
Translates to: LGLSRRSLGLSI*GWMHRSITWCW
Trigger: CCAACACCAAGTTATACTTCTATGCATCCATCCCCAAATGCTCAGACCCAAGGATCTTCTGCTCAGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 72 bp ACTGGTCTGAAGGAAGACTATCAAGTTCGATGGCTGTaGGGGATTCTGTGGAGTTGGCATTTTCCATGGTGT +
Preference number: 3 (lower is better)
Translates to: TGLKEDYQVRWL*GILWSWHFPWC
Trigger: ACACCATGGAAAATGCCAACTCCACAGAATCCCCCACAGCCATCGAACTTGATAGTCTTCCTTCAGACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 72 bp TTGCCAACTGGTCTGAAGGAAGACTATCAAGTTCGATaGCTGTGGGGGATTCTGTGGAGTTGGCATTTTCCA +
Preference number: 3 (lower is better)
Translates to: LPTGLKEDYQVR*LWGILWSWHFP
Trigger: TGGAAAATGCCAACTCCACAGAATCCCCCACAGCCATCGAACTTGATAGTCTTCCTTCAGACCAGTTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTTATGATCCCAGCATTTaGGAGGCTGAGACAGGTGGG +
Preference number: 3 (lower is better)
Translates to: QDATHQITFHNLQYFLHCYDPSI*EAETGG
Trigger: CCCACCTGTCTCAGCCTCCAAAATGCTGGGATCATA...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAATAGTCAACTGTTTCTaGAATGGGTCAGAACTTTGT +
Preference number: 3 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEIVNCF*NGSELC
Trigger: ACAAAGTTCTGACCCATTCAAGAAACAGTTGACTAT...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TTGCCAACTGGTCTGAAGGAAGACTATCAAGTTCGATGGCTGTGGGGGATTCTGGCAATAAATCCTGTTTaGACCTCTGGCTGCTTTTCC +
Preference number: 3 (lower is better)
Translates to: LPTGLKEDYQVRWLWGILAINPV*TSGCFS
Trigger: GGAAAAGCAGCCAGAGGTCAAAACAGGATTTATTGC...CAGAATCCCCCACAGCCATCGAACTTGATAGTCTTCCTTCAGACCAGTTGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGTATGATCCCAGCATTTaGGAGGCTGAGACAGGTGGG +
Preference number: 3 (lower is better)
Translates to: DISYAVRINERCNSSEQQYDPSI*EAETGG
Trigger: CCCACCTGTCTCAGCCTCCAAAATGCTGGGATCATA...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGACTGTGTCCTGTCCTTTaGCCAACTGGTCTGAAGGAA +
Preference number: 3 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRLCPVL*PTGLKE
Trigger: TTCCTTCAGACCAGTTGGCAAAAGGACAGGACACAG...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp GGGCAGGGTGCAGCTGCTGAGCTTCATGTTCTAAATTaGAGACATTTTTACACAGGATGCCACACACCAGAT +
Preference number: 3 (lower is better)
Translates to: GQGAAAELHVLN*RHFYTGCHTPD
Trigger: ATCTGGTGTGTGGCATCCTGTGTAAAAATGTCTTCAATTTAGAACATGAAGCTCAGCAGCTGCACCCTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 72 bp TTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATaGACAGGCCGAGGGCAACTGCAGTTCACAAGGGAA +
Preference number: 3 (lower is better)
Translates to: FTCEMVYNRTQL*TGRGQLQFTRE
Trigger: TTCCCTTGTGAACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR GCA 72 bp AGCTCCATGTTAGAAAGACACGGTGTTCAGGGTCAATaGTATAAGACTGGAACATGGCTGTGTCCTGTTCTC +
Preference number: 3 (lower is better)
Translates to: SSMLERHGVQGQ*YKTGTWLCPVL
Trigger: GAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCTGAACACCGTGTCTTTCTAACATGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR GCA 72 bp ATGATCCCAGCATTTTGGAGGCTGAGACAGGTGGGCTaGCATGAATTTGGAGCCAATGGACTAATATTGAGT +
Preference number: 3 (lower is better)
Translates to: MIPAFWRLRQVG*HEFGANGLILS
Trigger: ACTCAATATTAGTCCATTGGCTCCAAATTCATGGCAGCCCACCTGTCTCAGCCTCCAAAATGCTGGGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR GCA 72 bp TTGGCTTCACTGAAGGGGCCCTTTGTTGTTAGCTGTTaGAATGGTTTTGAAGGTTCAGGGAGGTCTAGTTTC +
Preference number: 3 (lower is better)
Translates to: LASLKGPFVVSC*NGFEGSGRSSF
Trigger: GAAACTAGACCTCCCTGAACCTTCAAAACCATTGCAACAGCTAACAACAAAGGGCCCCTTCAGTGAAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 72 bp GGTAAAAGTAGCTCATCGTTGCTCTTTTCTAGGGCTTaGATGGTGTCAGGATCCAGAGCAATGCTAACAAGC +
Preference number: 3 (lower is better)
Translates to: GKSSSSLLFSRA*MVSGSRAMLTS
Trigger: GCTTGTTAGCATTGCTCTGGATCCTGACACCATGCAAGCCCTAGAAAAGAGCAACGATGAGCTACTTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 72 bp CTGAGCAGAAGATCCTTGGGTCTGAGCATTTGGGGATaGATGCATAGAAGTATAACTTGGTGTTGGGGTAGA +
Preference number: 3 (lower is better)
Translates to: LSRRSLGLSIWG*MHRSITWCWGR
Trigger: TCTACCCCAACACCAAGTTATACTTCTATGCATCCATCCCCAAATGCTCAGACCCAAGGATCTTCTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 72 bp CCTTCTATTGCAACTGTGTCCTGTCCTTTTGCCAACTaGTCTGAAGGAAGACTATCAAGTTCGATGGCTGTG +
Preference number: 3 (lower is better)
Translates to: PSIATVSCPFAN*SEGRLSSSMAV
Trigger: CACAGCCATCGAACTTGATAGTCTTCCTTCAGACCAGTTGGCAAAAGGACAGGACACAGTTGCAATAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAAAAGCAGTCACAGAATaGCACAGCTCCACACCATTT +
Preference number: 3 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKKAVTE*HSSTPF
Trigger: AAATGGTGTGGAGCTGTGCAATTCTGTGACTGCTTT...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TTGCCAACTGGTCTGAAGGAAGACTATCAAGTTCGATGGCTGTGGGGGATTCTGGAAACTCATCTTGCTTaGACGATGTATACACACTTG +
Preference number: 3 (lower is better)
Translates to: LPTGLKEDYQVRWLWGILETHLA*TMYTHL
Trigger: CAAGTGTGTATACATCGTCAAAGCAAGATGAGTTTC...CAGAATCCCCCACAGCCATCGAACTTGATAGTCTTCCTTCAGACCAGTTGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATATTGGACTGGCCACTTaGCTGGTTAAGTTGTGTCAT +
Preference number: 3 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYIGLAT*LVKLCH
Trigger: ATGACACAACTTAACCAGCAAAGTGGCCAGTCCAAT...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp CATGCAAAAGGAGTCCACAGGGCAGGGTGCAGCTGCTaGGCTTCATGTTCTAAATTGAAGACATTTTTACAC +
Preference number: 3 (lower is better)
Translates to: HAKGVHRAGCSC*ASCSKLKTFLH
Trigger: GTGTAAAAATGTCTTCAATTTAGAACATGAAGCTCAGCAGCTGCACCCTGCCCTGTGGACTCCTTTTGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 72 bp GTTAAAGGCACCGAAGGAGAACTCCACTTCCAGTTCTaGGAGTTAGGAAAGCTGTGTGTAACACTGCATACA +
Preference number: 3 (lower is better)
Translates to: VKGTEGELHFQF*ELGKLCVTLHT
Trigger: TGTATGCAGTGTTACACACAGCTTTCCTAACTCTCAGAACTGGAAGTGGAGTTCTCCTTCGGTGCCTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CCA 72 bp ATGCATAGAAGTATAACTTGGTGTTGGGGTAGAAACTaGCAAGCTCTGACCCCGAGAGGCAGAAGAATAAGA +
Preference number: 3 (lower is better)
Translates to: MHRSITWCWGRN*QALTPRGRRIR
Trigger: TCTTATTCTTCTGCCTCTCGGGGTCAGAGCTTGCCAGTTTCTACCCCAACACCAAGTTATACTTCTATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTTGCATGCTTTATCATTaGACAGTCACCCCACAGTTT +
Preference number: 3 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCCMLYH*TVTPQF
Trigger: AAACTGTGGGGTGACTGTCAAATGATAAAGCATGCA...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATCTCTTGCCAACAGCATaGCTGTTACATAAAATAAGC +
Preference number: 3 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYLLPTA*LLHKIS
Trigger: GCTTATTTTATGTAACAGCAATGCTGTTGGCAAGAG...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAAATAGGCTTGAGGGGTTaGCTGGGCTCCCCCAAGTGT +
Preference number: 3 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEIGLRG*LGSPKC
Trigger: ACACTTGGGGGAGCCCAGCAAACCCCTCAAGCCTAT...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp TGCATACAGCCTGATGTGTGTATCTGTGTAGGGACATaGCTTCTGCAGAAGTTGGTTCTCTTATTCCACAGT +
Preference number: 3 (lower is better)
Translates to: CIQPDVCICVGT*LLQKLVLLFHS
Trigger: ACTGTGGAATAAGAGAACCAACTTCTGCAGAAGTCATGTCCCTACACAGATACACACATCAGGCTGTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 72 bp GAAACGGGAAGGAGACCCTTTCTTCAACCACTCATTTaGATCAGCGATGGACACAAACACACAAACACAAAC +
Preference number: 3 (lower is better)
Translates to: ETGRRPFLQPLI*ISDGHKHTNTN
Trigger: GTTTGTGTTTGTGTGTTTGTGTCCATCGCTGATTCAAATGAGTGGTTGAAGAAAGGGTCTCCTTCCCGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 72 bp TTTGGATCAGGAGAAGGTATGCTACTTTGTAATGTCTaGCCACGAGTAGAGGATGCAAAAGAGGACTGCACA +
Preference number: 3 (lower is better)
Translates to: FGSGEGMLLCNV*PRVEDAKEDCT
Trigger: TGTGCAGTCCTCTTTTGCATCCTCTACTCGTGGTCAGACATTACAAAGTAGCATACCTTCTCCTGATCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp CAAACTGATTCTTTGAGTCATGTGGATTGGCTTCACTaGAGGGGCCCTTTGTTGTTAGCTGTTGCAATGGTT +
Preference number: 3 (lower is better)
Translates to: QTDSLSHVDWLH*RGPLLLAVAMV
Trigger: AACCATTGCAACAGCTAACAACAAAGGGCCCCTTCAGTGAAGCCAATCCACATGACTCAAAGAATCAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 72 bp ATACTTTCTGCACTGTGGCCAGACACAAATGCTTTCTaGTGTCTCTTTACTTCTGACATGTCATGGGGGAAA +
Preference number: 3 (lower is better)
Translates to: ILSALWPDTNAF*CLFTSDMSWGK
Trigger: TTTCCCCCATGACATGTCAGAAGTAAAGAGACAGCAGAAAGCATTTGTGTCTGGCCACAGTGCAGAAAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR GCA 72 bp ACCTTCGCTTCATGCATCTTGTGCATGAGAGAATGCTaGTGGTTGAGGTCTTTAGTATTCAACCTTACCTGT +
Preference number: 3 (lower is better)
Translates to: TFASCILCMREC*WLRSLVFNLTC
Trigger: ACAGGTAAGGTTGAATACTAAAGACCTCAACCAGCAGCATTCTCTCATGCACAAGATGCATGAAGCGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAAATCTCAGGATTCTCTaGCCAACAGCATTGCTGTTA +
Preference number: 3 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRNLRIL*PTALLL
Trigger: TAACAGCAATGCTGTTGGCAAGAGAATCCTGAGATT...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCCAACAAACAGCTCAGTaGCTGCTGAGGAATGCATGC +
Preference number: 3 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFQQTAQ*LLRNAC
Trigger: GCATGCATTCCTCAGCAGCAACTGAGCTGTTTGTTG...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGATTTCAGCATAAGACTTaGGATCAGGAGAAGGTATGC +
Preference number: 3 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRFQHKT*DQEKVC
Trigger: GCATACCTTCTCCTGATCCAAAGTCTTATGCTGAAA...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAAGTCAGATGAAGGTCTaGTTTAATTGTTGCAACAGC +
Preference number: 3 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKSQMKV*FNCCNS
Trigger: GCTGTTGCAACAATTAAACAAGACCTTCATCTGACT...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp TGGCAATTTCTCAACCCTGCTGGACCTATAAACCTGTaGATGAACAATAGATGGCACATTATGTGGCTGTAC +
Preference number: 3 (lower is better)
Translates to: WQFLNPAGPINL*MNNRWHIMWLY
Trigger: GTACAGCCACATAATGTGCCATCTATTGTTCATTCACAGGTTTATAGGTCCAGCAGGGTTGAGAAATTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp CCTGAGACTGACCAGAAGAATAATTTTGAGACTCACTaGCTGATGGCAGGTCTCTTGTTTGAGCAGGATAAT +
Preference number: 3 (lower is better)
Translates to: PETDQKNNFETH*LMAGLLFEQDN
Trigger: ATTATCCTGCTCAAACAAGAGACCTGCCATCAGTCAGTGAGTCTCAAAATTATTCTTCTGGTCAGTCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATTATGATCCCAGCATTTaGGAGGCTGAGACAGGTGGG +
Preference number: 3 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDYDPSI*EAETGG
Trigger: CCCACCTGTCTCAGCCTCCAAAATGCTGGGATCATA...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTGATAGGCAGACAAAGTaGGTGGTGGAAGTGTCCCAG +
Preference number: 3 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCADRQTK*VVEVSQ
Trigger: CTGGGACACTTCCACCACCAACTTTGTCTGCCTATC...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTCGGGTAGCCTTTGGCTaGATGATTCAAGAGATGCTT +
Preference number: 3 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIRVAFG*MIQEML
Trigger: AAGCATCTCTTGAATCATCAAGCCAAAGGCTACCCG...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATAGGATGGAGCTGCTGTaGAGGATGTTCACCGTTGCT +
Preference number: 3 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDRMELL*RMFTVA
Trigger: AGCAACGGTGAACATCCTCAACAGCAGCTCCATCCT...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp AGACTGACCAGAAGAATAATTTTGAGACTCACTGACTaGTGGCAGGTCTCTTGTTTGAGCAGGATAATTCTC +
Preference number: 3 (lower is better)
Translates to: RLTRRIILRLTD*WQVSCLSRIIL
Trigger: GAGAATTATCCTGCTCAAACAAGAGACCTGCCATCAGTCAGTGAGTCTCAAAATTATTCTTCTGGTCAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 72 bp AGCCTTTGGCTTGATGATTCAAGAGATGCTTGTGACTaGAATGCCTGTAATTTTTGCACTGGAAACTCATCT +
Preference number: 3 (lower is better)
Translates to: SLWLDDSRDACD*NACNFCTGNSS
Trigger: AGATGAGTTTCCAGTGCAAAAATTACAGGCATTGCAGTCACAAGCATCTCTTGAATCATCAAGCCAAAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 72 bp GATCACTTTCCACAACTTACAATACTTTCTGCACTGTaGCCAGACACAAATGCTTTCTGCTGTCTCTTTACT +
Preference number: 3 (lower is better)
Translates to: DHFPQLTILSAL*PDTNAFCCLFT
Trigger: AGTAAAGAGACAGCAGAAAGCATTTGTGTCTGGCCACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCAACAGCAAACTCCTGTGCAGACTTAGTGGTTGTTTTAGAAGTCCTTAGAGTTACGATGTATACACACTaGAGTCAAGCTTCCTTTCAG +
Preference number: 3 (lower is better)
Translates to: STANSCADLVVVLEVLRVTMYTH*SQASFQ
Trigger: CTGAAAGGAAGCTTGACTCAAGTGTGTATACATCGT...AACTCTAAGGACTTCTAAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCAACAGCAAACTCCTGTGCAGACTTAGTGGTTGTTTTAGAAGTCCTTAGAGTTATTTCTTCCTTTTCTTaGGTGGTGGCTCAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: STANSCADLVVVLEVLRVISSFS*VVAQPL
Trigger: TAAAGGCTGAGCCACCACCAAAGAAAAGGAAGAAAT...AACTCTAAGGACTTCTAAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CCA 72 bp CTCCAACAACTTGATCTTCAAGGTGAGAGTTATTTCTaGTTACACTCTGAGAATACCTATCATCTGCCTTTG +
Preference number: 3 (lower is better)
Translates to: LQQLDLQGESYF*LHSENTYHLPL
Trigger: CAAAGGCAGATGATAGGTATTCTCAGAGTGTAACCAGAAATAACTCTCACCTTGAAGATCAAGTTGTTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATAAAGCAGTCACAGAATaGCACAGCTCCACACCATTT +
Preference number: 3 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDKAVTE*HSSTPF
Trigger: AAATGGTGTGGAGCTGTGCAATTCTGTGACTGCTTT...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAGAGAATGCTGCTGGTaGAGGTCTTTAGTATTCAAC +
Preference number: 3 (lower is better)
Translates to: VFHISVHGIMDQLKILDYRECCW*RSLVFN
Trigger: GTTGAATACTAAAGACCTCAACCAGCAGCATTCTCT...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR TCA 72 bp AAAATGTCCACTTCAAGACAGAATCTATGCTGCAAATaGCATGTACCTACACAGGGCTTACTGAAAACAATG +
Preference number: 3 (lower is better)
Translates to: KMSTSRQNLCCK*HVPTQGLLKTM
Trigger: CATTGTTTTCAGTAAGCCCTGTGTAGGTACATGTCATTTGCAGCATAGATTCTGTCTTGAAGTGGACATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR TCA 72 bp GTTCCCTGGGAAGTCTTAATTTGTAGCAAAGGGTCATaGGGGCTTAAAATTCCATTGGATGTAGTGTTAAAA +
Preference number: 3 (lower is better)
Translates to: VPWEVLICSKGS*GLKIPLDVVLK
Trigger: TTTTAACACTACATCCAATGGAATTTTAAGCCCTCATGACCCTTTGCTACAAATTAAGACTTCCCAGGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 72 bp CATTTTGATCTTAGAAATAGCAGATCCTCCACTCTTTaGTTTAGAGTCTCGAGTAATAACTGTCAGTTCAGG +
Preference number: 3 (lower is better)
Translates to: HFDLRNSRSSTL*FRVSSNNCQFR
Trigger: CCTGAACTGACAGTTATTACTCGAGACTCTAAAGCAAAGAGTGGAGGATCTGCTATTTCTAAGATCAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTTGCATGCTTTATCATTaGACAGTCACCCCACAGTTT +
Preference number: 3 (lower is better)
Translates to: SHSPIYKAKLILAPNESSCMLYH*TVTPQF
Trigger: AAACTGTGGGGTGACTGTCAAATGATAAAGCATGCA...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACCTCTTGCCAACAGCATaGCTGTTACATAAAATAAGC +
Preference number: 3 (lower is better)
Translates to: VFHISVHGIMDQLKILDYLLPTA*LLHKIS
Trigger: GCTTATTTTATGTAACAGCAATGCTGTTGGCAAGAG...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATAATCTCAGGATTCTCTaGCCAACAGCATTGCTGTTA +
Preference number: 3 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDNLRIL*PTALLL
Trigger: TAACAGCAATGCTGTTGGCAAGAGAATCCTGAGATT...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTCTCTTGCCAACAGCATaGCTGTTACATAAAATAAGC +
Preference number: 3 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTLLPTA*LLHKIS
Trigger: GCTTATTTTATGTAACAGCAATGCTGTTGGCAAGAG...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR-3UTR CAA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAACAAACTGATTCTTaGAGTCATGTGGATTGGCTT +
Preference number: 3 (lower is better)
Translates to: VFHISVHGIMDQLKILDYKQTDS*SHVDWL
Trigger: AAGCCAATCCACATGACTCAAAGAATCAGTTTGTTT...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR GCA 72 bp ATTAGAGACAAACTCTTGATTTCTGTTATTACTCAGTaGACTGTCAACAGCAATTTCCCTGTCTTCTTTAGA +
Preference number: 3 (lower is better)
Translates to: IRDKLLISVITQ*TVNSNFPVFFR
Trigger: TCTAAAGAAGACAGGGAAATTGCTGTTGACAGTGCACTGAGTAATAACAGAAATCAAGAGTTTGTCTCTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR CCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCCCTGGCTGGGGCATaGCCAGCAGTGCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWPLAGA*PAVQVY
Trigger: GTACACTTGCACTGCTGGCCATGCCCCAGCCAGGGG...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAACTTCATAGCTGGCCTTaGGGCTGGGACTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCELHSWP*GWDCCR
Trigger: GCGGCAGCAGTCCCAGCCTCAAGGCCAGCTATGAAG...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231375.2
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGGGATGGAGCTGCTGTTaGGGATGTTCACCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWGWSCC*GCSPLL
Trigger: GAGCAACGGTGAACATCCTCAACAGCAGCTCCATCC...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGGAAGATCCTTGGGTCTaGGCATTTGGGGATGGATGC +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWEDPWV*AFGDGC
Trigger: GCATCCATCCCCAAATGCTCAGACCCAAGGATCTTC...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGCCCAGGCGCTCAAATaGCAAAGCAGTCGGAACAGT +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEAQALK*QSSRNS
Trigger: ACTGTTCCGACTGCTTTGGCATTTGAGCGCCTGGGC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGCAAGAGTGGAGAACTaGTGCTTGGGCCCACACTTC +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEARVEN*CLGPHF
Trigger: GAAGTGTGGGCCCAAGCAGCAGTTCTCCACTCTTGC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAAGCAGTCTCAGCAGATaGACCAGGAGTTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCESSLSR*TRSCHR
Trigger: CCTGTGGCAACTCCTGGTGCATCTGCTGAGACTGCT...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATGCTGCATCCCCTGGCTaGGGCATGGCCAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYAASPG*GMASSA
Trigger: TGCACTGCTGGCCATGCCCCAGCCAGGGGATGCAGC...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGTGTCTTTGCAAAAGGTaGGGGACAGAACGTACGGGT +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWCLCKR*GTERTG
Trigger: ACCCGTACGTTCTGTCCCCCACCTTTTGCAAAGACA...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCTGTGGGGGATTCTGTaGAGTTGGCATTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWLWGIL*SWHFPW
Trigger: CCATGGAAAATGCCAACTCCACAGAATCCCCCACAG...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
3UTR CAA 72 bp AGGCAGACAAAGTTGGTGGTGGAAGTGTCCCAGTGGTaGGCAAGGGTCCTGCAACAAACAGCTCAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RQTKLVVEVSQW*ARVLQQTAQLL
Trigger: CAGCAACTGAGCTGTTTGTTGCAGGACCCTTGCCAACCACTGGGACACTTCCACCACCAACTTTGTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGTTTTCTTCCTGTTCTaGACCCTGGAGAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEVFFLF*TLESNS
Trigger: GGAGTTGCTCTCCAGGGTTCAGAACAGGAAGAAAAC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGGTGAACGTCTGTCTCTaGAGAACATCTGACTCAGAC +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWVNVCL*RTSDSD
Trigger: GTCTGAGTCAGATGTTCTTCAGAGACAGACGTTCAC...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231375.2
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGCTGATGAGAGGCTGTaGACGTCTGTCTCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEADERL*TSVSEE
Trigger: TTCTTCAGAGACAGACGTTCACAGCCTCTCATCAGC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231375.2
ENSMUST00000238887.2
CDS-3UTR GCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAACCACGAGTAGAGGATaGAAAAGAGGACTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCETTSRG*KRGLHS
Trigger: GCTGTGCAGTCCTCTTTTGCATCCTCTACTCGTGGT...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCCCCTGGCTGGGGCATaGCCAGCAGTGCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCPLAGA*PAVQVY
Trigger: GTACACTTGCACTGCTGGCCATGCCCCAGCCAGGGG...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTGCTGCATCCCCTGGCTaGGGCATGGCCAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QDATHQITFHNLQYFLHCAASPG*GMASSA
Trigger: TGCACTGCTGGCCATGCCCCAGCCAGGGGATGCAGC...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
3UTR CAA 72 bp GGATGCAAAAGAGGACTGCACAGCAGGCAGAAACTCTaGGGGCTGAGCAGAAGATCCTTGGGTCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: GCKRGLHSRQKL*GLSRRSLGLSI
Trigger: AATGCTCAGACCCAAGGATCTTCTGCTCAGCCCCAAGAGTTTCTGCCTGCTGTGCAGTCCTCTTTTGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 72 bp ACTCTGAACACGCTGTACTTGCAAGGATGCCTTTGCTaGTCCCAGGCTAGCCTGGAGAATTCCAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: TLNTLYLQGCLC*SQASLENSSLL
Trigger: CAACAGGCTGGAATTCTCCAGGCTAGCCTGGGACAAGCAAAGGCATCCTTGCAAGTACAGCGTGTTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 72 bp ATGGACTATCTGTTGCGGACTCTGAACACGCTGTACTaGCAAGGATGCCTTTGCTTGTCCCAGGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: MDYLLRTLNTLY*QGCLCLSQASL
Trigger: CAGGCTAGCCTGGGACAAGCAAAGGCATCCTTGCAAGTACAGCGTGTTCAGAGTCCGCAACAGATAGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR GCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGAAGATCAGTGGCTACTaGATTATTGGACTGGCCACT +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWKISGY*IIGLAT
Trigger: AGTGGCCAGTCCAATAATGCAGTAGCCACTGATCTT...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGTTTTGACCTCTGGCTaGTTTTCCTCCACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEVLTSG*FSSTSL
Trigger: CAAGGAAGTGGAGGAAAAGCAGCCAGAGGTCAAAAC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGACTAGGAAAAAGAGCTaGATTATAGGCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWTRKKS*IIGLRG
Trigger: ACCCCTCAAGCCTATAATTCAGCTCTTTTTCCTAGT...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATCTGAGCAAGTTCTGCTaGGACCTGAGGGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYLSKFC*DLRGLL
Trigger: CAGAAGACCCCTCAGGTCTCAGCAGAACTTGCTCAG...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGGGACCTATAAACCTGTaGATGAACAATAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWGPINL*MNNRWH
Trigger: GTGCCATCTATTGTTCATTCACAGGTTTATAGGTCC...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATGAAACTGGCAAGCTCTaGCCCCGAGAGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYETGKL*PREAEE
Trigger: TTCTTCTGCCTCTCGGGGTCAGAGCTTGCCAGTTTC...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GTGAAATGGTTTACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTGCAGTTGCATGCCAGTTGCTTaGGGAGTGGTGGCATATCCA +
Preference number: 4 (lower is better)
Translates to: VKWFTTGLSYEQAEGNCSCMPVA*GVVAYP
Trigger: TGGATATGCCACCACTCCTCAAGCAACTGGCATGCA...ACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGTAACTGAAGGCCGCTaGTGGTGTTTAATAACGCTA +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEVTEGR*WCLITL
Trigger: TAGCGTTATTAAACACCACCAGCGGCCTTCAGTTAC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAACCATCGGGTAGCCTTTaGCTTGATGATTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEPSGSL*LDDSRD
Trigger: ATCTCTTGAATCATCAAGCCAAAGGCTACCCGATGG...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGGACTGGCCACTTTGCTaGTTAAGTTGTGTCATTGAA +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWDWPLC*LSCVIE
Trigger: TTCAATGACACAACTTAACCAGCAAAGTGGCCAGTC...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATCTCGAACAGCAAGAGTaGAGAACTGCTGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYLEQQE*RTAAWA
Trigger: GGCCCAAGCAGCAGTTCTCCACTCTTGCTGTTCGAG...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAGCAGTGGAGGCAGTaGGAGCAACACCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCQQWRQ*EQHQQS
Trigger: AGACTGCTGGTGTTGCTCCCACTGCCTCCACTGCTG...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GTGAAATGGTTTACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTGCAGTAATAGACTGGGTAACTaGAGGCCGCTGGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: VKWFTTGLSYEQAEGNCSNRLGN*RPLVVF
Trigger: AAACACCACCAGCGGCCTTCAGTTACCCAGTCTATT...ACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAGAAACTGGCAAGCTCTaGCCCCGAGAGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKETGKL*PREAEE
Trigger: TTCTTCTGCCTCTCGGGGTCAGAGCTTGCCAGTTTC...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAATTGCTCTGGATGATATaGCCATCCATCTGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCELLWMI*PSICRK
Trigger: TTTCCTACAGATGGATGGTCATATCATCCAGAGCAA...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GTGAAATGGTTTACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTGCAGTGTGGATTGGCTTCACTaGAGGGGCCCTTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VKWFTTGLSYEQAEGNCSVDWLH*RGPLLL
Trigger: TAACAACAAAGGGCCCCTTCAGTGAAGCCAATCCAC...ACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCTGAATTCACATGCCTaGCATTTAATGACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWLNSHA*HLMTAD
Trigger: ATCAGCAGTCATTAAATGTCAGGCATGTGAATTCAG...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGTGTAGTTGTAGTTTTTaGTACTGGTGGGTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWCSCSF*YWWVRS
Trigger: ACTTCTGACCCACCAGTATCAAAAACTACAACTACA...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATGGTTGGCAAGGGTCCTaGAACAAACAGCTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYGWQGS*NKQLSC
Trigger: GCAACTGAGCTGTTTGTTGCAGGACCCTTGCCAACC...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTGCCCAGGCGCTCAAATaGCAAAGCAGTCGGAACAGT +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCAQALK*QSSRNS
Trigger: ACTGTTCCGACTGCTTTGGCATTTGAGCGCCTGGGC...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGAGAGATGCTTGTGACTaGAATGCCTGTAATTTTTGC +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWRDACD*NACNFC
Trigger: GCAAAAATTACAGGCATTGCAGTCACAAGCATCTCT...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTGGGCATGGCCAGCAGTaGAAGTGTACTCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCGHGQQ*KCTPSR
Trigger: CCTAGAAGGAGTACACTTGCACTGCTGGCCATGCCC...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGACTGGCCACTTTGCTaGTTAAGTTGTGTCATTGAA +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEDWPLC*LSCVIE
Trigger: TTCAATGACACAACTTAACCAGCAAAGTGGCCAGTC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATCTCGAACAGCAAGAGTaGAGAACTGCTGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYLEQQE*RTAAWA
Trigger: GGCCCAAGCAGCAGTTCTCCACTCTTGCTGTTCGAG...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAATGTCCTTTTGCCAACTaGTCTGAAGGAAGACTATCA +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCECPFAN*SEGRLS
Trigger: TGATAGTCTTCCTTCAGACCAGTTGGCAAAAGGACA...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
3UTR CAA 72 bp CTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTaGAGGGATGAGGGTTGTGGAGGAAGCCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LLHEITPALYVC*RDEGCGGSPGS
Trigger: AGACCCTGGGCTTCCTCCACAACCCTCATCCCTCAAGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 72 bp GAGCAACACCAGCAGTCTCAGCAGATGCACCAGGAGTaGCCACAGGCAGAGCTTCTAAAACTGTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: EQHQQSQQMHQE*PQAELLKLFSL
Trigger: CAAAGAAAACAGTTTTAGAAGCTCTGCCTGTGGCAACTCCTGGTGCATCTGCTGAGACTGCTGGTGTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAAATTTTGGGACTGACTaGCTGATAAAAGGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCENFGTD*LIKGLV
Trigger: TACCAAGCCTTTTATCAGTCAGTCAGTCCCAAAATT...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATTGCTTGTGCTGCAGGTaGTGTCTTTGCAAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYCLCCR*CLCKRW
Trigger: CCACCTTTTGCAAAGACATCACCTGCAGCACAAGCA...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCATTTTCCATGGTGTTaGCAGTTAATGAAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWHFPWC*QLMKSD
Trigger: ATCTGACTTCATTAACTGTCAACACCATGGAAAATG...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTCTTCATAGCTGGCCTTaGGGCTGGGACTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LFSSAYKMKSQDSLANSILHSWP*GWDCCR
Trigger: GCGGCAGCAGTCCCAGCCTCAAGGCCAGCTATGAAG...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000231375.2
ENSMUST00000238887.2
CDS-3UTR GCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATACCACGAGTAGAGGATaGAAAAGAGGACTGCACAGC +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYTTSRG*KRGLHS
Trigger: GCTGTGCAGTCCTCTTTTGCATCCTCTACTCGTGGT...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATACACATCTGTCCCTCTaGGGTTCTGTCGCTTGCATT +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYTHLSL*GSVACI
Trigger: AATGCAAGCGACAGAACCCCAGAGGGACAGATGTGT...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATCAGTTGCTTGAGGAGTaGTGGCATATCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYQLLEE*WHIQEA
Trigger: AGCTTCCTGGATATGCCACCACTCCTCAAGCAACTG...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 72 bp TTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTaGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGG +
Preference number: 4 (lower is better)
Translates to: FSYSTVWVLELR*SSLAESAYTHW
Trigger: CCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 72 bp CTTGAGCATTCACTTCCCCATCGGGTAGCCTTTGGCTaGATGATTCAAGAGATGCTTGTGACTGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: LEHSLPHRVAFG*MIQEMLVTAMP
Trigger: AGGCATTGCAGTCACAAGCATCTCTTGAATCATCAAGCCAAAGGCTACCCGATGGGGAAGTGAATGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGGTTTTCTTCCTGTTCTaGACCCTGGAGAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLVFFLF*TLESNS
Trigger: GGAGTTGCTCTCCAGGGTTCAGAACAGGAAGAAAAC...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAATTAGTTGGTATAGTTTaGCTAGGTGTTTCCATATGC +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCELVGIV*LGVSIC
Trigger: GCATATGGAAACACCTAGTCAAACTATACCAACTAA...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGCAGCTCAGTTGCTGCTaGGGAATGCATGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: DISYAVRINERCNSSEQQQLSCC*GMHASC
Trigger: GCAACTGGCATGCATTCCTCAGCAGCAACTGAGCTG...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAGAAAGTTTCCTTCATTaGTCTTGTGTTCAGAAAACG +
Preference number: 4 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCEESFLH*SCVQKT
Trigger: CGTTTTCTGAACACAAGAGCAATGAAGGAAACTTTC...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGACTGCTGAGGAATGCATaGCAGTTGCTTGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRLLRNA*QLLEEW
Trigger: CCACTCCTCAAGCAACTGGCATGCATTCCTCAGCAG...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATGCACCAAAGGTGAGGTaGTCGCAAAGTTTCTATTGC +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYAPKVR*SQSFYC
Trigger: GCAATAGAAACTTTGCGACCACCTCACCTTTGGTGC...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTACTGGCTGCATCCCCTaGCTGGGGCATGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTTGCIP*LGHGQQ
Trigger: CTGCTGGCCATGCCCCAGCCAGGGGATGCAGCCAGT...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTACTGGCTGCATCCCCTaGCTGGGGCATGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCATGCIP*LGHGQQ
Trigger: CTGCTGGCCATGCCCCAGCCAGGGGATGCAGCCAGT...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGATGGAGAACTGCTGCTTaGGCCCACACTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRWRTAA*AHTSGS
Trigger: ACTTCCTGAAGTGTGGGCCCAAGCAGCAGTTCTCCA...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATTTGCTTGAGGAGTGGTaGCATATCCAGGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYLLEEW*HIQEAD
Trigger: ATCAGCTTCCTGGATATGCCACCACTCCTCAAGCAA...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231375.2
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAATTGAAGCACCAAAGGTaGGGTGGTCGCAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKLKHQR*GGRKVS
Trigger: AGAAACTTTGCGACCACCTCACCTTTGGTGCTTCAA...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATTCAGAGGTTACAGGCTaGGATGACCCAGAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYSEVTG*DDPEKV
Trigger: GACTTTTTCTGGGTCATCTCAGCCTGTAACCTCTGA...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGTGTTCCTGGATTTCCTaGCCCAGTCCAACCATGGCA +
Preference number: 4 (lower is better)
Translates to: DISYAVRINERCNSSEQQCSWIS*PSPTMA
Trigger: TGCCATGGTTGGACTGGGTCAGGAAATCCAGGAACA...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAGTGAACGTCTGTCTCTaGAGAACATCTGACTCAGAC +
Preference number: 4 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKVNVCL*RTSDSD
Trigger: GTCTGAGTCAGATGTTCTTCAGAGACAGACGTTCAC...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231375.2
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTGCTGATGAGAGGCTGTaGACGTCTGTCTCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: QDATHQITFHNLQYFLHCADERL*TSVSEE
Trigger: TTCTTCAGAGACAGACGTTCACAGCCTCTCATCAGC...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231375.2
ENSMUST00000238887.2
CDS-3UTR CCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATGCACCAAAGGTGAGGTaGTCGCAAAGTTTCTATTGC +
Preference number: 4 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYAPKVR*SQSFYC
Trigger: GCAATAGAAACTTTGCGACCACCTCACCTTTGGTGC...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTGGAAGGGGAAGTGTATaGTACATACACATCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCGRGSV*YIHICP
Trigger: GGGACAGATGTGTATGTACCATACACTTCCCCTTCC...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGTGGAGAACTGCTGCTTaGGCCCACACTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: DISYAVRINERCNSSEQQWRTAA*AHTSGS
Trigger: ACTTCCTGAAGTGTGGGCCCAAGCAGCAGTTCTCCA...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTTCAGAGGTTACAGGCTaGGATGACCCAGAAAAAGTC +
Preference number: 4 (lower is better)
Translates to: QDATHQITFHNLQYFLHCSEVTG*DDPEKV
Trigger: GACTTTTTCTGGGTCATCTCAGCCTGTAACCTCTGA...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGAATTTTGAGACTCACTaGCTGATGGCAGGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLNFETH*LMAGLL
Trigger: CAAGAGACCTGCCATCAGTCAGTGAGTCTCAAAATT...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GTGAAATGGTTTACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTGCAGTTATTTCTTTCATCACTaGGAAGCATTGCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: VKWFTTGLSYEQAEGNCSYFFHH*EALPLR
Trigger: TCTCAGAGGCAATGCTTCTCAGTGATGAAAGAAATA...ACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATCTGTGGCTTTCCTACTaGAGCTGCTATGGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYLWLSY*SCYGVK
Trigger: TTTAACTCCATAGCAGCTTCAGTAGGAAAGCCACAG...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAGCAATTTCTCAACCCTaGTGGACCTATAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKAISQP*WTYKPV
Trigger: CACAGGTTTATAGGTCCAGCAGGGTTGAGAAATTGC...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATTTGTGCATGAGAGAATaGTGCTGGTTGAGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYLCMRE*CWLRSL
Trigger: TAAAGACCTCAACCAGCAGCATTCTCTCATGCACAA...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTATAGGCAGACAAAGTTaGTGGTGGAAGTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QDATHQITFHNLQYFLHCIGRQS*WWKCPS
Trigger: ACTGGGACACTTCCACCACCAACTTTGTCTGCCTAT...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAACTGAAGGCCGCTGGTaGTGTTTAATAACGCTACAT +
Preference number: 4 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKTEGRW*CLITLH
Trigger: ATGTAGCGTTATTAAACACCACCAGCGGCCTTCAGT...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTGTAACTGAAGGCCGCTaGTGGTGTTTAATAACGCTA +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCVTEGR*WCLITL
Trigger: TAGCGTTATTAAACACCACCAGCGGCCTTCAGTTAC...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATAGTATAACTTGGTGTTaGGGTAGAAACTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYSITWC*GRNWQA
Trigger: AGCTTGCCAGTTTCTACCCCAACACCAAGTTATACT...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAACCATCGGGTAGCCTTTaGCTTGATGATTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKPSGSL*LDDSRD
Trigger: ATCTCTTGAATCATCAAGCCAAAGGCTACCCGATGG...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATACTGCATTATTGGACTaGCCACTTTGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYTALLD*PLCWLS
Trigger: ACTTAACCAGCAAAGTGGCCAGTCCAATAATGCAGT...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAGGAAGGGGAAGTGTATaGTACATACACATCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRGRGSV*YIHICP
Trigger: GGGACAGATGTGTATGTACCATACACTTCCCCTTCC...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATTACTTTCCAAATAGCTaGGGGCTCTTTTCCCGTATT +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYYFPNS*GLFSRI
Trigger: AATACGGGAAAAGAGCCCCCAGCTATTTGGAAAGTA...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
3UTR CAA 72 bp CTATCAAGTTCGATGGCTGTGGGGGATTCTGTGGAGTaGGCATTTTCCATGGTGTTGACAGTTAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: LSSSMAVGDSVE*AFSMVLTVNEV
Trigger: GACTTCATTAACTGTCAACACCATGGAAAATGCCAACTCCACAGAATCCCCCACAGCCATCGAACTTGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGGGCTCCCCCAAGTGTTaGAGGCAACAAACTAAATTG +
Preference number: 4 (lower is better)
Translates to: DISYAVRINERCNSSEQQGSPKC*RQQTKL
Trigger: CAATTTAGTTTGTTGCCTTCAACACTTGGGGGAGCC...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATAATTTTGGGACTGACTaGCTGATAAAAGGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYNFGTD*LIKGLV
Trigger: TACCAAGCCTTTTATCAGTCAGTCAGTCCCAAAATT...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGACTACTTTGTAATGTCTaGCCACGAGTAGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRLLCNV*PRVEDA
Trigger: TGCATCCTCTACTCGTGGTCAGACATTACAAAGTAG...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATAATGGCTGGTCCAAATaGAGATTCACAAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYNGWSK*RFTRSL
Trigger: AAGACTTCTTGTGAATCTTCATTTGGACCAGCCATT...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTGGTTGGCAAGGGTCCTaGAACAAACAGCTCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIGWQGS*NKQLSC
Trigger: GCAACTGAGCTGTTTGTTGCAGGACCCTTGCCAACC...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp GTGAAATGGTTTACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTGCAGTAATGCCTGTAATTTTTaGACTGGAAACTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: VKWFTTGLSYEQAEGNCSNACNF*TGNSSC
Trigger: GCAAGATGAGTTTCCAGTGCAAAAATTACAGGCATT...ACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTAAGATCAGTGGCTACTaGATTATTGGACTGGCCACT +
Preference number: 4 (lower is better)
Translates to: QDATHQITFHNLQYFLHCKISGY*IIGLAT
Trigger: AGTGGCCAGTCCAATAATGCAGTAGCCACTGATCTT...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTTGTGCATGAGAGAATaGTGCTGGTTGAGGTCTTTA +
Preference number: 4 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLLCMRE*CWLRSL
Trigger: TAAAGACCTCAACCAGCAGCATTCTCTCATGCACAA...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTGCTGCAAATTCTCTTTaGCCATCTCGAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCAANSL*PSRISG
Trigger: TCCTGAAATTCGAGATGGGCAAAGAGAATTTGCAGC...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATATTTCTCAACCCTGCTaGACCTATAAACCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYISQPC*TYKPVN
Trigger: ATTCACAGGTTTATAGGTCCAGCAGGGTTGAGAAAT...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATGGTGAGAGTTATTTCTaGTTACACTCTGAGAATACC +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYGESYF*LHSENT
Trigger: GGTATTCTCAGAGTGTAACCAGAAATAACTCTCACC...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATATGAGAGAATGCTGCTaGTTGAGGTCTTTAGTATTC +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYMRECC*LRSLVF
Trigger: GAATACTAAAGACCTCAACCAGCAGCATTCTCTCAT...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATCAGCAGTGGAGGCAGTaGGAGCAACACCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDQQWRQ*EQHQQS
Trigger: AGACTGCTGGTGTTGCTCCCACTGCCTCCACTGCTG...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTTTGTTGCAACAGCAGTaGAGGCAGTGGGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: LFSSAYKMKSQDSLANSILLQQQ*RQWEQH
Trigger: GTGTTGCTCCCACTGCCTCCACTGCTGTTGCAACAA...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATTGTCCTTTTGCCAACTaGTCTGAAGGAAGACTATCA +
Preference number: 4 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYCPFAN*SEGRLS
Trigger: TGATAGTCTTCCTTCAGACCAGTTGGCAAAAGGACA...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTTACTTTCCAAATAGCTaGGGGCTCTTTTCCCGTATT +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCYFPNS*GLFSRI
Trigger: AATACGGGAAAAGAGCCCCCAGCTATTTGGAAAGTA...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGCCTTTTCTTTGGTGGTaGCTCAGCCTTTATTTTGAG +
Preference number: 4 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLPFLWW*LSLYFE
Trigger: CTCAAAATAAAGGCTGAGCCACCACCAAAGAAAAGG...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGTTGCTTGAGGAGTGGTaGCATATCCAGGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: DISYAVRINERCNSSEQQLLEEW*HIQEAD
Trigger: ATCAGCTTCCTGGATATGCCACCACTCCTCAAGCAA...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 72 bp AATGGAACATTTGACCCCGAGAGAAATTCCCATGACTaGGTACCACAGAGCCAAACAGCAGGTAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: NGTFDPERNSHD*VPQSQTAGKNA
Trigger: AGCATTTTTACCTGCTGTTTGGCTCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 72 bp GGAAACGGGAAGGAGACCCTTTCTTCAACCACTCATTaGAATCAGCGATGGACACAAACACACAAACACAAA +
Preference number: 4 (lower is better)
Translates to: GNGKETLSSTTH*NQRWTQTHKHK
Trigger: TTTGTGTTTGTGTGTTTGTGTCCATCGCTGATTCAAATGAGTGGTTGAAGAAAGGGTCTCCTTCCCGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
3UTR CAA 72 bp GCCTGGATGGTTCCTGAAAATTACCAATACTTGCACTaGATAGGTAGCTATGTAAGGGATGCTGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: AWMVPENYQYLH*IGSYVRDAVNQ
Trigger: CTGGTTCACAGCATCCCTTACATAGCTACCTATCAAGTGCAAGTATTGGTAATTTTCAGGAACCATCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 72 bp ACGACTGCCTGGATGGTTCCTGAAAATTACCAATACTaGCACTTGATAGGTAGCTATGTAAGGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: TTAWMVPENYQY*HLIGSYVRDAV
Trigger: CACAGCATCCCTTACATAGCTACCTATCAAGTGCAAGTATTGGTAATTTTCAGGAACCATCCAGGCAGTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 72 bp GCTTCATGCATCTTGTGCATGAGAGAATGCTGCTGGTaGAGGTCTTTAGTATTCAACCTTACCTGTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ASCILCMRECCW*RSLVFNLTCGV
Trigger: AACTCCACAGGTAAGGTTGAATACTAAAGACCTCAACCAGCAGCATTCTCTCATGCACAAGATGCATGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 72 bp GAGGAAGAGCCTGATGACTCTGCCCTAAAGCAGGATTaGGAATCTGTATCTGAGATGAGGCACTCATTATTT +
Preference number: 4 (lower is better)
Translates to: EEEPDDSALKQD*ESVSEMRHSLF
Trigger: AAATAATGAGTGCCTCATCTCAGATACAGATTCCAAATCCTGCTTTAGGGCAGAGTCATCAGGCTCTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAACTAGGAAAAAGAGCTaGATTATAGGCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRTRKKS*IIGLRG
Trigger: ACCCCTCAAGCCTATAATTCAGCTCTTTTTCCTAGT...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTAATAGACTGGGTAACTaGAGGCCGCTGGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LFSSAYKMKSQDSLANSINRLGN*RPLVVF
Trigger: AAACACCACCAGCGGCCTTCAGTTACCCAGTCTATT...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTCTGAGCAAGTTCTGCTaGGACCTGAGGGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSLSKFC*DLRGLL
Trigger: CAGAAGACCCCTCAGGTCTCAGCAGAACTTGCTCAG...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATAATTTGTGCTTGACCTaGTATTACAGAACTCTGGTT +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYNLCLT*YYRTLV
Trigger: AACCAGAGTTCTGTAATATCAGGTCAAGCACAAATT...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATTTCTTGCTGATTGGATaGATAACTAAGTGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYFLLIG*ITKCLV
Trigger: AACCAGACACTTAGTTATTCATCCAATCAGCAAGAA...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGGGATGGAGCTGCTGTTaGGGATGTTCACCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKGWSCC*GCSPLL
Trigger: GAGCAACGGTGAACATCCTCAACAGCAGCTCCATCC...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTGTGGATTGGCTTCACTaGAGGGGCCCTTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIVDWLH*RGPLLL
Trigger: TAACAACAAAGGGCCCCTTCAGTGAAGCCAATCCAC...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTATTTCTTTCATCACTaGGAAGCATTGCCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLYFFHH*EALPLR
Trigger: TCTCAGAGGCAATGCTTCTCAGTGATGAAAGAAATA...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATAATGCCTGTAATTTTTaGACTGGAAACTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYNACNF*TGNSSC
Trigger: GCAAGATGAGTTTCCAGTGCAAAAATTACAGGCATT...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTGGGCATGGCCAGCAGTaGAAGTGTACTCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCAGHGQQ*KCTPSR
Trigger: CCTAGAAGGAGTACACTTGCACTGCTGGCCATGCCC...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTAGAGTGGAGAACTGCTaGTTGGGCCCACACTTCAGG +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCARVENC*LGPHFR
Trigger: CCTGAAGTGTGGGCCCAAGCAGCAGTTCTCCACTCT...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAAAGAGTGGAGAACTGCTaGTTGGGCCCACACTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVSHSPIYKAKLILAPNERVENC*LGPHFR
Trigger: CCTGAAGTGTGGGCCCAAGCAGCAGTTCTCCACTCT...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGGCAAGAGTGGAGAACTaGTGCTTGGGCCCACACTTC +
Preference number: 4 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKARVEN*CLGPHF
Trigger: GAAGTGTGGGCCCAAGCAGCAGTTCTCCACTCTTGC...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTAGCAGTCTCAGCAGATaGACCAGGAGTTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSSSLSR*TRSCHR
Trigger: CCTGTGGCAACTCCTGGTGCATCTGCTGAGACTGCT...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATTGTAAAACCTTCTATTaGAACTGTGTCCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYCKTFY*NCVLSF
Trigger: AAAGGACAGGACACAGTTGCAATAGAAGGTTTTACA...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTAACAGCAAACTCCTGTaGAGACTTAGTGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCNSKLL*RLSGCF
Trigger: AAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTT...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAATAAAGACGACTGCCTaGATGGTTCCTGAAAATTAC +
Preference number: 4 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKIKTTA*MVPENY
Trigger: GTAATTTTCAGGAACCATCCAGGCAGTCGTCTTTAT...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTAGTATAACTTGGTGTTaGGGTAGAAACTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: QDATHQITFHNLQYFLHCSITWC*GRNWQA
Trigger: AGCTTGCCAGTTTCTACCCCAACACCAAGTTATACT...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGCTGAGCATTTGGGGATaGATGCATAGAAGTATAACT +
Preference number: 4 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLLSIWG*MHRSIT
Trigger: AGTTATACTTCTATGCATCCATCCCCAAATGCTCAG...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTACACATCTGTCCCTCTaGGGTTCTGTCGCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LFSSAYKMKSQDSLANSITHLSL*GSVACI
Trigger: AATGCAAGCGACAGAACCCCAGAGGGACAGATGTGT...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
3UTR CAA 72 bp TTTCATAATATCAGAATTGTGAGGATGGAGCTGCTGTaGAGGATGTTCACCGTTGCTCTGGATGATATGACC +
Preference number: 4 (lower is better)
Translates to: FHNIRIVRMELL*RMFTVALDDMT
Trigger: GGTCATATCATCCAGAGCAACGGTGAACATCCTCAACAGCAGCTCCATCCTCACAATTCTGATATTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
3UTR CAA 72 bp CTTTCAATATCTTGCATGGTTTCATTTGCAGCTGACTaGGAAAAGTCAGAAGGTGTAACCCCACAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSISCMVSFAAD*EKSEGVTPQAA
Trigger: AGCAGCTTGTGGGGTTACACCTTCTGACTTTTCCAAGTCAGCTGCAAATGAAACCATGCAAGATATTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTTGTAGTGTTAAAAGATaGATCTTGAAGCACCAAAGG +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCCSVKR*ILKHQR
Trigger: CCTTTGGTGCTTCAAGATTCATCTTTTAACACTACA...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTGAAGATCCTTGGGTCTaGGCATTTGGGGATGGATGC +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCAEDPWV*AFGDGC
Trigger: GCATCCATCCCCAAATGCTCAGACCCAAGGATCTTC...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAAATCTGTATCTGAGATaGGGCACTCATTATTTGATC +
Preference number: 4 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKNLYLR*GTHYLI
Trigger: GATCAAATAATGAGTGCCTCATCTCAGATACAGATT...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTAATCTGTATCTGAGATaGGGCACTCATTATTTGATC +
Preference number: 4 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCNLYLR*GTHYLI
Trigger: GATCAAATAATGAGTGCCTCATCTCAGATACAGATT...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTAACAAACTGATTCTTTaGGTCATGTGGATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QDATHQITFHNLQYFLHCNKLIL*VMWIGF
Trigger: GAAGCCAATCCACATGACTCAAAGAATCAGTTTGTT...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTTGTTCCTGGATTTCCTaGCCCAGTCCAACCATGGCA +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSCSWIS*PSPTMA
Trigger: TGCCATGGTTGGACTGGGTCAGGAAATCCAGGAACA...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATTTTGTTGTTAGCTGTTaGAATGGTTTTGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYFVVSC*NGFEGS
Trigger: TGAACCTTCAAAACCATTGCAACAGCTAACAACAAA...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTGTTTTGACCTCTGGCTaGTTTTCCTCCACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIVLTSG*FSSTSL
Trigger: CAAGGAAGTGGAGGAAAAGCAGCCAGAGGTCAAAAC...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATGTAACTATTTGTAGCTaGAAATTCTCTTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYVTICS*KFSLPI
Trigger: GATGGGCAAAGAGAATTTGCAGCTACAAATAGTTAC...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGGAAAGTTTCCTTCATTaGTCTTGTGTTCAGAAAACG +
Preference number: 4 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLESFLH*SCVQKT
Trigger: CGTTTTCTGAACACAAGAGCAATGAAGGAAACTTTC...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAAGATCCTCCACTCTTTaGTTTAGAGTCTCGAGTAAT +
Preference number: 4 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRRSSTL*FRVSSN
Trigger: ATTACTCGAGACTCTAAAGCAAAGAGTGGAGGATCT...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATTGTTGCAACAGCAGTaGAGGCAGTGGGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: SVSHSPIYKAKLILAPNELLQQQ*RQWEQH
Trigger: GTGTTGCTCCCACTGCCTCCACTGCTGTTGCAACAA...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGACTTCCTTTTCTTTGGTaGTGGCTCAGCCTTTATTTT +
Preference number: 4 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRLPFLW*WLSLYF
Trigger: AAAATAAAGGCTGAGCCACCACCAAAGAAAAGGAAG...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACCAGTTGCTTGAGGAGTaGTGGCATATCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: VFHISVHGIMDQLKILDYQLLEE*WHIQEA
Trigger: AGCTTCCTGGATATGCCACCACTCCTCAAGCAACTG...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000231375.2
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTCGATATGTTGAAGACTaGGGTGGTACGCTGTTACTT +
Preference number: 4 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIRYVED*GGTLLL
Trigger: AAGTAACAGCGTACCACCTCAGTCTTCAACATATCG...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCCTGTGGCTTTCCTACTaGAGCTGCTATGGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFLWLSY*SCYGVK
Trigger: TTTAACTCCATAGCAGCTTCAGTAGGAAAGCCACAG...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTTGCTTGTGCTGCAGGTaGTGTCTTTGCAAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCACLCCR*CLCKRW
Trigger: CCACCTTTTGCAAAGACATCACCTGCAGCACAAGCA...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGACTTACCTGTGGAGTTTaGATTAAATTAGTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRLTCGV*IKLVAF
Trigger: GAAGGCAACTAATTTAATGCAAACTCCACAGGTAAG...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTTTTCATCTTCAGTCTTaGCACTGGCTGCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSFHLQS*HWLHPL
Trigger: CAGGGGATGCAGCCAGTGGCAAGACTGAAGATGAAA...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTTGTAAAACCTTCTATTaGAACTGTGTCCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: QDATHQITFHNLQYFLHCCKTFY*NCVLSF
Trigger: AAAGGACAGGACACAGTTGCAATAGAAGGTTTTACA...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGCATAGAAGTATAACTTaGTGTTGGGGTAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: DISYAVRINERCNSSEQQHRSIT*CWGRNW
Trigger: CCAGTTTCTACCCCAACACCAAGTTATACTTCTATG...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACTCCTGTTCTGAACCCTaGAGAGCAACTCCAACAACT +
Preference number: 4 (lower is better)
Translates to: VFHISVHGIMDQLKILDYSCSEP*RATPTT
Trigger: AGTTGTTGGAGTTGCTCTCCAGGGTTCAGAACAGGA...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAAGAAGGTACTTTAGTTaGTATAGTTTGACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKRRYFS*YSLTRC
Trigger: ACACCTAGTCAAACTATACCAACTAAAGTACCTTCT...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGTGTCTTTGCAAAAGGTaGGGGACAGAACGTACGGGT +
Preference number: 4 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKCLCKR*GTERTG
Trigger: ACCCGTACGTTCTGTCCCCCACCTTTTGCAAAGACA...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAACTGTGGGGGATTCTGTaGAGTTGGCATTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: SVSHSPIYKAKLILAPNELWGIL*SWHFPW
Trigger: CCATGGAAAATGCCAACTCCACAGAATCCCCCACAG...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTTGAAGCACCAAAGGTaGGGTGGTCGCAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTLKHQR*GGRKVS
Trigger: AGAAACTTTGCGACCACCTCACCTTTGGTGCTTCAA...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAAGGCTCCCCCAAGTGTTaGAGGCAACAAACTAAATTG +
Preference number: 4 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEGSPKC*RQQTKL
Trigger: CAATTTAGTTTGTTGCCTTCAACACTTGGGGGAGCC...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTTGCTCTGGATGATATaGCCATCCATCTGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFLLWMI*PSICRK
Trigger: TTTCCTACAGATGGATGGTCATATCATCCAGAGCAA...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATTTCTGTCGCTTGCATTaGGCAGACCTTTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDFCRLH*ADLFSC
Trigger: ACAGCTGAAAAGGTCTGCTCAATGCAAGCGACAGAA...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATTCTGTCGCTTGCATTaGGCAGACCTTTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEFCRLH*ADLFSC
Trigger: ACAGCTGAAAAGGTCTGCTCAATGCAAGCGACAGAA...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTAAAAGACCAGTTGCTTaGGGAGTGGTGGCATATCCA +
Preference number: 4 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTKRPVA*GVVAYP
Trigger: TGGATATGCCACCACTCCTCAAGCAACTGGTCTTTT...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR GCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTTACTTAATGCAGAACTaGCCAGGCGCTCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCAYLMQN*PGAQMP
Trigger: TGGCATTTGAGCGCCTGGGCAGTTCTGCATTAAGTA...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAAGCTTCATGCATCTTGTaGATGAGAGAATGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEASCIL*MRECCW
Trigger: CCAGCAGCATTCTCTCATGCACAAGATGCATGAAGC...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTGCTTCATGCATCTTGTaGATGAGAGAATGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCAASCIL*MRECCW
Trigger: CCAGCAGCATTCTCTCATGCACAAGATGCATGAAGC...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTTCCCAAAAGACCAGTTaGTTGAGGAGTGGTGGCATA +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCASQKTS*LRSGGI
Trigger: TATGCCACCACTCCTCAAGCAACTGGTCTTTTGGGA...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR CCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTATAGGCAGACAAAGTTaGTGGTGGAAGTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSIGRQS*WWKCPS
Trigger: ACTGGGACACTTCCACCACCAACTTTGTCTGCCTAT...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACACTGAAGGCCGCTGGTaGTGTTTAATAACGCTACAT +
Preference number: 4 (lower is better)
Translates to: VFHISVHGIMDQLKILDYTEGRW*CLITLH
Trigger: ATGTAGCGTTATTAAACACCACCAGCGGCCTTCAGT...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTTCCTGTTCTGAACCCTaGAGAGCAACTCCAACAACT +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSSCSEP*RATPTT
Trigger: AGTTGTTGGAGTTGCTCTCCAGGGTTCAGAACAGGA...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTACTGCATTATTGGACTaGCCACTTTGCTGGTTAAGT +
Preference number: 4 (lower is better)
Translates to: LFSSAYKMKSQDSLANSITALLD*PLCWLS
Trigger: ACTTAACCAGCAAAGTGGCCAGTCCAATAATGCAGT...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
3UTR CAA 72 bp ACACACTTGAGTCAAGCTTCCTTTCAGCATAAGACTTaGGATCAGGAGAAGGTATGCTACTTTGTAATGTCT +
Preference number: 4 (lower is better)
Translates to: THLSQASFQHKT*DQEKVCYFVMS
Trigger: AGACATTACAAAGTAGCATACCTTCTCCTGATCCAAAGTCTTATGCTGAAAGGAAGCTTGACTCAAGTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTCGATATGTTGAAGACTaGGGTGGTACGCTGTTACTT +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSRYVED*GGTLLL
Trigger: AAGTAACAGCGTACCACCTCAGTCTTCAACATATCG...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTCTACTTTGTAATGTCTaGCCACGAGTAGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSLLCNV*PRVEDA
Trigger: TGCATCCTCTACTCGTGGTCAGACATTACAAAGTAG...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCAACAAACTGATTCTTTaGGTCATGTGGATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFNKLIL*VMWIGF
Trigger: GAAGCCAATCCACATGACTCAAAGAATCAGTTTGTT...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTTTTCCAAAGCATTCTTaGATGGCTGGTCCAAATGAA +
Preference number: 4 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIFPKHS*MAGPNE
Trigger: TTCATTTGGACCAGCCATTCAAGAATGCTTTGGAAA...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTGCAATTTCTCAACCCTaGTGGACCTATAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSAISQP*WTYKPV
Trigger: CACAGGTTTATAGGTCCAGCAGGGTTGAGAAATTGC...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCAGAGATGCTTGTGACTaGAATGCCTGTAATTTTTGC +
Preference number: 4 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFRDACD*NACNFC
Trigger: GCAAAAATTACAGGCATTGCAGTCACAAGCATCTCT...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACTTGGACTGGCCACTTTaGTGGTTAAGTTGTGTCATT +
Preference number: 4 (lower is better)
Translates to: VFHISVHGIMDQLKILDYLDWPL*WLSCVI
Trigger: AATGACACAACTTAACCAGCAAAGTGGCCAGTCCAA...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTGTCGGAACAGTTCCCTaGGAAGTCTTAATTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTVGTVP*EVLICS
Trigger: GCTACAAATTAAGACTTCCCAGGGAACTGTTCCGAC...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCCTGAGCATTTGGGGATaGATGCATAGAAGTATAACT +
Preference number: 4 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFLSIWG*MHRSIT
Trigger: AGTTATACTTCTATGCATCCATCCCCAAATGCTCAG...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
3UTR CAA 72 bp ATGCCTGTAATTTTTGCACTGGAAACTCATCTTGCTTaGACGATGTATACACACTTGAGTCAAGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: MPVIFALETHLA*TMYTHLSQASF
Trigger: AAAGGAAGCTTGACTCAAGTGTGTATACATCGTCAAAGCAAGATGAGTTTCCAGTGCAAAAATTACAGGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGTAGTGTTAAAAGATaGATCTTGAAGCACCAAAGG +
Preference number: 4 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFCSVKR*ILKHQR
Trigger: CCTTTGGTGCTTCAAGATTCATCTTTTAACACTACA...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTTGTAGCAAAGGGTCATaGGGGCTTAAAATTCCATTG +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSCSKGS*GLKIPL
Trigger: CAATGGAATTTTAAGCCCTCATGACCCTTTGCTACA...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTGGACCTATAAACCTGTaGATGAACAATAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTGPINL*MNNRWH
Trigger: GTGCCATCTATTGTTCATTCACAGGTTTATAGGTCC...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTTTTTGCCAACTGGTCTaGAGGAAGACTATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSFCQLV*RKTIKF
Trigger: GAACTTGATAGTCTTCCTTCAGACCAGTTGGCAAAA...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATTTTTGCCAACTGGTCTaGAGGAAGACTATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDFCQLV*RKTIKF
Trigger: GAACTTGATAGTCTTCCTTCAGACCAGTTGGCAAAA...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTTTGGACTGGCCACTTTaGTGGTTAAGTTGTGTCATT +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSLDWPL*WLSCVI
Trigger: AATGACACAACTTAACCAGCAAAGTGGCCAGTCCAA...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGGCTGCAAATTCTCTTTaGCCATCTCGAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKAANSL*PSRISG
Trigger: TCCTGAAATTCGAGATGGGCAAAGAGAATTTGCAGC...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAGATCCTCCACTCTTTaGTTTAGAGTCTCGAGTAAT +
Preference number: 4 (lower is better)
Translates to: VFHISVHGIMDQLKILDYRSSTL*FRVSSN
Trigger: ATTACTCGAGACTCTAAAGCAAAGAGTGGAGGATCT...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTCCTTTTCTTTGGTGGTaGCTCAGCCTTTATTTTGAG +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCAPFLWW*LSLYFE
Trigger: CTCAAAATAAAGGCTGAGCCACCACCAAAGAAAAGG...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
3UTR CAA 72 bp TTCTGGTTACACTCTGAGAATACCTATCATCTGCCTTaGATGTCTTATAAACTGACTCTTGAGCATTCACTT +
Preference number: 4 (lower is better)
Translates to: FWLHSENTYHLP*MSYKLTLEHSL
Trigger: AAGTGAATGCTCAAGAGTCAGTTTATAAGACATCAAAGGCAGATGATAGGTATTCTCAGAGTGTAACCAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR TCA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATCTGAATTCACATGCCTaGCATTTAATGACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDLNSHA*HLMTAD
Trigger: ATCAGCAGTCATTAAATGTCAGGCATGTGAATTCAG...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACATTCCATGTAACTCTTaGAAGTTTCCTTCATTGCTC +
Preference number: 4 (lower is better)
Translates to: VFHISVHGIMDQLKILDYIPCNS*KFPSLL
Trigger: GAGCAATGAAGGAAACTTTCAAGAGTTACATGGAAT...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTAATGGCTGGTCCAAATaGAGATTCACAAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSNGWSK*RFTRSL
Trigger: AAGACTTCTTGTGAATCTTCATTTGGACCAGCCATT...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATTTCCAAAGCATTCTTaGATGGCTGGTCCAAATGAA +
Preference number: 4 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEFPKHS*MAGPNE
Trigger: TTCATTTGGACCAGCCATTCAAGAATGCTTTGGAAA...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTAACAGCAAACTCCTGTaGAGACTTAGTGGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSNSKLL*RLSGCF
Trigger: AAAACAACCACTAAGTCTGCACAGGAGTTTGCTGTT...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTATAAAGACGACTGCCTaGATGGTTCCTGAAAATTAC +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCAIKTTA*MVPENY
Trigger: GTAATTTTCAGGAACCATCCAGGCAGTCGTCTTTAT...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAAATTTCTCAACCCTGCTaGACCTATAAACCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEISQPC*TYKPVN
Trigger: ATTCACAGGTTTATAGGTCCAGCAGGGTTGAGAAAT...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAAATGAGAGAATGCTGCTaGTTGAGGTCTTTAGTATTC +
Preference number: 4 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEMRECC*LRSLVF
Trigger: GAATACTAAAGACCTCAACCAGCAGCATTCTCTCAT...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATTCTTGCTGATTGGATaGATAACTAAGTGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEFLLIG*ITKCLV
Trigger: AACCAGACACTTAGTTATTCATCCAATCAGCAAGAA...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTTTAGTTGGTATAGTTTaGCTAGGTGTTTCCATATGC +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSLVGIV*LGVSIC
Trigger: GCATATGGAAACACCTAGTCAAACTATACCAACTAA...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR TCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTCATTTTCCATGGTGTTaGCAGTTAATGAAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCAHFPWC*QLMKSD
Trigger: ATCTGACTTCATTAACTGTCAACACCATGGAAAATG...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTTCTGTTATTACTCAGTaGACTGTCAACAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCASVITQ*TVNSNF
Trigger: GAAATTGCTGTTGACAGTGCACTGAGTAATAACAGA...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATTCTGTTATTACTCAGTaGACTGTCAACAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDSVITQ*TVNSNF
Trigger: GAAATTGCTGTTGACAGTGCACTGAGTAATAACAGA...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR GCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTGTAACTATTTGTAGCTaGAAATTCTCTTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSVTICS*KFSLPI
Trigger: GATGGGCAAAGAGAATTTGCAGCTACAAATAGTTAC...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CCA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAGAAGGTACTTTAGTTaGTATAGTTTGACTAGGTGT +
Preference number: 4 (lower is better)
Translates to: VFHISVHGIMDQLKILDYRRYFS*YSLTRC
Trigger: ACACCTAGTCAAACTATACCAACTAAAGTACCTTCT...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
3UTR CAA 72 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATaGAAAATTCTGGACTACAAATGCAAGCTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: VFHISVHGIMDQ*KILDYKCKLLY
Trigger: ATACAAAAGCTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
ENSMUST00000238887.2
CDS-3UTR GCA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTTTTGTTGTTAGCTGTTaGAATGGTTTTGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SHSPIYKAKLILAPNESSFVVSC*NGFEGS
Trigger: TGAACCTTCAAAACCATTGCAACAGCTAACAACAAA...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAACTGAACACGCTGTACTaGCAAGGATGCCTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCELNTLY*QGCLCL
Trigger: CAAGCAAAGGCATCCTTGCAAGTACAGCGTGTTCAG...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp AGAGGTGCAATTCCTCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCTGATGGCAGGTCTCTaGTTTGAGCAGGATAATTCT +
Preference number: 5 (lower is better)
Translates to: RGAIPLSSRVLREAHRTWLMAGL*FEQDNS
Trigger: AGAATTATCCTGCTCAAACAAGAGACCTGCCATCAG...CCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGAGGAATTGCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAACTGATGGCAGGTCTCTaGTTTGAGCAGGATAATTCT +
Preference number: 5 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCELMAGL*FEQDNS
Trigger: AGAATTATCCTGCTCAAACAAGAGACCTGCCATCAG...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTGTGGAGAACTGCTGCTaGGGCCCACACTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCVENCC*GPHFRK
Trigger: CTTCCTGAAGTGTGGGCCCAAGCAGCAGTTCTCCAC...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTGAGCAGCAGGGTCTTGAGGGAAGCTCACAGGACCTGGCCTTCACTTGTGAAAGAGAATGCTGCTGGTaGAGGTCTTTAGTATTCAAC +
Preference number: 5 (lower is better)
Translates to: SEQQGLEGSSQDLAFTCERECCW*RSLVFN
Trigger: GTTGAATACTAAAGACCTCAACCAGCAGCATTCTCT...TTCACAAGTGAAGGCCAGGTCCTGTGAGCTTCCCTCAAGACCCTGCTGCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTGTGGAGAACTGCTGCTaGGGCCCACACTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: QDATHQITFHNLQYFLHCVENCC*GPHFRK
Trigger: CTTCCTGAAGTGTGGGCCCAAGCAGCAGTTCTCCAC...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGGATAGGCAGACAAAGTaGGTGGTGGAAGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLDRQTK*VVEVSQ
Trigger: CTGGGACACTTCCACCACCAACTTTGTCTGCCTATC...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAGAGCTGAGCGATATGTaGAAGACTGAGGTGGTACGC +
Preference number: 5 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKELSDM*KTEVVR
Trigger: GCGTACCACCTCAGTCTTCAACATATCGCTCAGCTC...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATCTGTGTCCTGTCCTTTaGCCAACTGGTCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYLCPVL*PTGLKE
Trigger: TTCCTTCAGACCAGTTGGCAAAAGGACAGGACACAG...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAAGGAATGCATGCCAGTaGCTTGAGGAGTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKRNACQ*LEEWWH
Trigger: ATGCCACCACTCCTCAAGCAACTGGCATGCATTCCT...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp GTGAAATGGTTTACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTGCAGTATTGGACTGGCCACTTaGCTGGTTAAGTTGTGTCAT +
Preference number: 5 (lower is better)
Translates to: VKWFTTGLSYEQAEGNCSIGLAT*LVKLCH
Trigger: ATGACACAACTTAACCAGCAAAGTGGCCAGTCCAAT...ACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTAGGATGGAGCTGCTGTaGAGGATGTTCACCGTTGCT +
Preference number: 5 (lower is better)
Translates to: QDATHQITFHNLQYFLHCRMELL*RMFTVA
Trigger: AGCAACGGTGAACATCCTCAACAGCAGCTCCATCCT...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATGGGGATTCTGTGGAGTaGGCATTTTCCATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYGDSVE*AFSMVL
Trigger: CAACACCATGGAAAATGCCAACTCCACAGAATCCCC...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTATAGGCTTGAGGGGTTaGCTGGGCTCCCCCAAGTGT +
Preference number: 5 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIIGLRG*LGSPKC
Trigger: ACACTTGGGGGAGCCCAGCAAACCCCTCAAGCCTAT...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATGCAATAAATCCTGTTTaGACCTCTGGCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYAINPV*TSGCFS
Trigger: GGAAAAGCAGCCAGAGGTCAAAACAGGATTTATTGC...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTTTCCCAAAAGACCAGTaGCTTGAGGAGTGGTGGCAT +
Preference number: 5 (lower is better)
Translates to: QDATHQITFHNLQYFLHCFPKDQ*LEEWWH
Trigger: ATGCCACCACTCCTCAAGCAACTGGTCTTTTGGGAA...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS-3UTR CAA 90 bp TCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCAAGCTTGGCTGAAAATTGGACTGGCCACTTaGCTGGTTAAGTTGTGTCAT +
Preference number: 5 (lower is better)
Translates to: SLIPQCGSWNSGCQAWLKIGLAT*LVKLCH
Trigger: ATGACACAACTTAACCAGCAAAGTGGCCAGTCCAAT...TTTCAGCCAAGCTTGACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp GCTCACAGGACCTGGCCTTCACTTGTGAAATGGTTTACAACAGGACTCAGCTATTCATTTGCAGCTGACTaGGAAAAGTCAGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: AHRTWPSLVKWFTTGLSYSFAAD*EKSEGV
Trigger: TACACCTTCTGACTTTTCCAAGTCAGCTGCAAATGA...ATAGCTGAGTCCTGTTGTAAACCATTTCACAAGTGAAGGCCAGGTCCTGTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp GTGAAATGGTTTACAACAGGACTCAGCTATGAACAGGCCGAGGGCAACTGCAGTAGTCAGATGAAGGTCTaGTTTAATTGTTGCAACAGC +
Preference number: 5 (lower is better)
Translates to: VKWFTTGLSYEQAEGNCSSQMKV*FNCCNS
Trigger: GCTGTTGCAACAATTAAACAAGACCTTCATCTGACT...ACTGCAGTTGCCCTCGGCCTGTTCATAGCTGAGTCCTGTTGTAAACCATTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp AGGTTGTCAAGCTTGGCTGAAAGTGCCTATACCCACTGGGCCATCAAACTGTATATTTCTTCCTTTTCTTaGGTGGTGGCTCAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: RLSSLAESAYTHWAIKLYISSFS*VVAQPL
Trigger: TAAAGGCTGAGCCACCACCAAAGAAAAGGAAGAAAT...ATACAGTTTGATGGCCCAGTGGGTATAGGCACTTTCAGCCAAGCTTGACAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTGATAGGCAGACAAAGTaGGTGGTGGAAGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIDRQTK*VVEVSQ
Trigger: CTGGGACACTTCCACCACCAACTTTGTCTGCCTATC...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TTCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTTTCAGCATAAGACTTaGGATCAGGAGAAGGTATGC +
Preference number: 5 (lower is better)
Translates to: FCRSWFSYSTVWVLELRLFQHKT*DQEKVC
Trigger: GCATACCTTCTCCTGATCCAAAGTCTTATGCTGAAA...CAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTACGATGTATACACACTaGAGTCAAGCTTCCTTTCAG +
Preference number: 5 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCTMYTH*SQASFQ
Trigger: CTGAAAGGAAGCTTGACTCAAGTGTGTATACATCGT...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTGCCCTAAAGCAGGATTaGGAATCTGTATCTGAGATG +
Preference number: 5 (lower is better)
Translates to: QDATHQITFHNLQYFLHCALKQD*ESVSEM
Trigger: CATCTCAGATACAGATTCCAAATCCTGCTTTAGGGC...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTGCAGAAGTTGGTTCTCTTATTCCACAGTGTGGGTCTTGGAACTCAGGTTGTCTTGCATGGTTTCATTaGCAGCTGACTTGGAAAAGT +
Preference number: 5 (lower is better)
Translates to: SAEVGSLIPQCGSWNSGCLAWFH*QLTWKS
Trigger: ACTTTTCCAAGTCAGCTGCAAATGAAACCATGCAAG...ACAACCTGAGTTCCAAGACCCACACTGTGGAATAAGAGAACCAACTTCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGATGGCAGGTCTCTTGTTaGAGCAGGATAATTCTCATT +
Preference number: 5 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRWQVSC*SRIILI
Trigger: AATGAGAATTATCCTGCTCAAACAAGAGACCTGCCA...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAACAGATGCACCAGGAGTaGCCACAGGCAGAGCTTCTA +
Preference number: 5 (lower is better)
Translates to: SVSHSPIYKAKLILAPNEQMHQE*PQAELL
Trigger: TAGAAGCTCTGCCTGTGGCAACTCCTGGTGCATCTG...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTGTGAAGGCTTATTTCTaGGCTTTTTGGAACACACTC +
Preference number: 5 (lower is better)
Translates to: QDATHQITFHNLQYFLHCVKAYF*AFWNTL
Trigger: GAGTGTGTTCCAAAAAGCCAAGAAATAAGCCTTCAC...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTGAAACTCATCTTGCTTaGACGATGTATACACACTTG +
Preference number: 5 (lower is better)
Translates to: QDATHQITFHNLQYFLHCETHLA*TMYTHL
Trigger: CAAGTGTGTATACATCGTCAAAGCAAGATGAGTTTC...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCCGGGTAGCCTTTGGCTaGATGATTCAAGAGATGCTT +
Preference number: 5 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFRVAFG*MIQEML
Trigger: AAGCATCTCTTGAATCATCAAGCCAAAGGCTACCCG...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAAAGGATGGACTATCTGTaGCGGACTCTGAACACGCTG +
Preference number: 5 (lower is better)
Translates to: SVSHSPIYKAKLILAPNERMDYL*RTLNTL
Trigger: CAGCGTGTTCAGAGTCCGCAACAGATAGTCCATCCT...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTAGGATGGACTATCTGTaGCGGACTCTGAACACGCTG +
Preference number: 5 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTRMDYL*RTLNTL
Trigger: CAGCGTGTTCAGAGTCCGCAACAGATAGTCCATCCT...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTAGGATGGAGCTGCTGTaGAGGATGTTCACCGTTGCT +
Preference number: 5 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTRMELL*RMFTVA
Trigger: AGCAACGGTGAACATCCTCAACAGCAGCTCCATCCT...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp AGGGTCAATGCTATAAGACTGGAACATGGCTGTGTCCTGTTCTCCTCTGCTTATAAACAAACTGATTCTTaGAGTCATGTGGATTGGCTT +
Preference number: 5 (lower is better)
Translates to: RVNAIRLEHGCVLFSSAYKQTDS*SHVDWL
Trigger: AAGCCAATCCACATGACTCAAAGAATCAGTTTGTTT...ATAAGCAGAGGAGAACAGGACACAGCCATGTTCCAGTCTTATAGCATTGACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCGAATGGGTCAGAACTTaGTTCCTGGATTTCCTGACC +
Preference number: 5 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFEWVRT*FLDFLT
Trigger: GGTCAGGAAATCCAGGAACAAAGTTCTGACCCATTC...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACTTTTCATCTTCAGTCTaGCCACTGGCTGCATCCCCT +
Preference number: 5 (lower is better)
Translates to: VFHISVHGIMDQLKILDYFSSSV*PLAASP
Trigger: AGGGGATGCAGCCAGTGGCAAGACTGAAGATGAAAA...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTTTTTCCTCCACTTCCTaGATTTTCTGCCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: QDATHQITFHNLQYFLHCFSSTS*IFCLIF
Trigger: AAAGATGAGGCAGAAAATCAAGGAAGTGGAGGAAAA...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCAGAAATGGAACATTTGACCCCGAGAGAAATTCCCATGACTTGGTACCACAGAAGTCAGATGAAGGTCTaGTTTAATTGTTGCAACAGC +
Preference number: 5 (lower is better)
Translates to: SEMEHLTPREIPMTWYHRSQMKV*FNCCNS
Trigger: GCTGTTGCAACAATTAAACAAGACCTTCATCTGACT...TCTGTGGTACCAAGTCATGGGAATTTCTCTCGGGGTCAAATGTTCCATTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTGCATTTTCCATGGTGTaGACAGTTAATGAAGTCAGA +
Preference number: 5 (lower is better)
Translates to: QDATHQITFHNLQYFLHCAFSMV*TVNEVR
Trigger: TCTGACTTCATTAACTGTCAACACCATGGAAAATGC...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACGGGGATTCTGTGGAGTaGGCATTTTCCATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: VFHISVHGIMDQLKILDYGDSVE*AFSMVL
Trigger: CAACACCATGGAAAATGCCAACTCCACAGAATCCCC...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGGTGAAGGCTTATTTCTaGGCTTTTTGGAACACACTC +
Preference number: 5 (lower is better)
Translates to: DISYAVRINERCNSSEQQVKAYF*AFWNTL
Trigger: GAGTGTGTTCCAAAAAGCCAAGAAATAAGCCTTCAC...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTGCCCTAAAGCAGGATTaGGAATCTGTATCTGAGATG +
Preference number: 5 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIALKQD*ESVSEM
Trigger: CATCTCAGATACAGATTCCAAATCCTGCTTTAGGGC...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp AGTGTTTCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAACTGAACACGCTGTACTaGCAAGGATGCCTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: SVSHSPIYKAKLILAPNELNTLY*QGCLCL
Trigger: CAAGCAAAGGCATCCTTGCAAGTACAGCGTGTTCAG...TTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGAAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCTGCACTGTATAGTCAACTGTTTCTaGAATGGGTCAGAACTTTGT +
Preference number: 5 (lower is better)
Translates to: QDATHQITFHNLQYFLHCIVNCF*NGSELC
Trigger: ACAAAGTTCTGACCCATTCAAGAAACAGTTGACTAT...ACAGTGCAGAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp GATATTTCCTATGCTGTAAGAATAAACGAGAGGTGCAATTCCTCTGAGCAGCAGGCATTTTCCATGGTGTaGACAGTTAATGAAGTCAGA +
Preference number: 5 (lower is better)
Translates to: DISYAVRINERCNSSEQQAFSMV*TVNEVR
Trigger: TCTGACTTCATTAACTGTCAACACCATGGAAAATGC...CTGCTGCTCAGAGGAATTGCACCTCTCGTTTATTCTTACAGCATAGGAAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTAGCTGCAAATTCTCTTaGCCCATCTCGAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: LFSSAYKMKSQDSLANSISCKFS*PISNFR
Trigger: CCTGAAATTCGAGATGGGCAAAGAGAATTTGCAGCT...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTCGGGTAGCCTTTGGCTaGATGATTCAAGAGATGCTT +
Preference number: 5 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTRVAFG*MIQEML
Trigger: AAGCATCTCTTGAATCATCAAGCCAAAGGCTACCCG...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp ATATCAACACAGAATAACTTTTACATGAAATTACCCCAGCTCTCTATGTGTGCTGAATGGGTCAGAACTTaGTTCCTGGATTTCCTGACC +
Preference number: 5 (lower is better)
Translates to: ISTQNNFYMKLPQLSMCAEWVRT*FLDFLT
Trigger: GGTCAGGAAATCCAGGAACAAAGTTCTGACCCATTC...AGCACACATAGAGAGCTGGGGTAATTTCATGTAAAAGTTATTCTGTGTTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTATCACGTTCCCTGTATaGACCTTCACCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTITFPV*TFTSTF
Trigger: GAAAGTGGAGGTGAAGGTCAATACAGGGAACGTGAT...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATATCACGTTCCCTGTATaGACCTTCACCTCCACTTTC +
Preference number: 5 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDITFPV*TFTSTF
Trigger: GAAAGTGGAGGTGAAGGTCAATACAGGGAACGTGAT...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CTGTTCTCCTCTGCTTATAAAATGAAATCTCAGGATTCTCTTGCCAACAGCATTATTTCTTCCTTTTCTTaGGTGGTGGCTCAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: LFSSAYKMKSQDSLANSIISSFS*VVAQPL
Trigger: TAAAGGCTGAGCCACCACCAAAGAAAAGGAAGAAAT...AATGCTGTTGGCAAGAGAATCCTGAGATTTCATTTTATAAGCAGAGGAGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACTGGCAGGTCTCTTGTTaGAGCAGGATAATTCTCATT +
Preference number: 5 (lower is better)
Translates to: VFHISVHGIMDQLKILDYWQVSC*SRIILI
Trigger: AATGAGAATTATCCTGCTCAAACAAGAGACCTGCCA...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TTTTTACACAGGATGCCACACACCAGATCACTTTCCACAACTTACAATACTTTCGAAACTCATCTTGCTTaGACGATGTATACACACTTG +
Preference number: 5 (lower is better)
Translates to: FLHRMPHTRSLSTTYNTFETHLA*TMYTHL
Trigger: CAAGTGTGTATACATCGTCAAAGCAAGATGAGTTTC...GAAAGTATTGTAAGTTGTGGAAAGTGATCTGGTGTGTGGCATCCTGTGTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTGCAATAAATCCTGTTTaGACCTCTGGCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SHSPIYKAKLILAPNESSAINPV*TSGCFS
Trigger: GGAAAAGCAGCCAGAGGTCAAAACAGGATTTATTGC...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATAGCTGCAAATTCTCTTaGCCCATCTCGAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDSCKFS*PISNFR
Trigger: CCTGAAATTCGAGATGGGCAAAGAGAATTTGCAGCT...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGTTTCAGCATAAGACTTaGGATCAGGAGAAGGTATGC +
Preference number: 5 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKFQHKT*DQEKVC
Trigger: GCATACCTTCTCCTGATCCAAAGTCTTATGCTGAAA...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCTTACCAATACTTCCAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCATTTGCAGCTGACTaGGAAAAGTCAGAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: SYQYFQFGKTIGKWTVSTSFAAD*EKSEGV
Trigger: TACACCTTCTGACTTTTCCAAGTCAGCTGCAAATGA...AGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTGGAAGTATTGGTAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp TCACACAGTCCCATTTATAAAGCTAAACTAATTCTAGCACCGAATGAATCTTCTCTTGCATGGTTTCATTaGCAGCTGACTTGGAAAAGT +
Preference number: 5 (lower is better)
Translates to: SHSPIYKAKLILAPNESSLAWFH*QLTWKS
Trigger: ACTTTTCCAAGTCAGCTGCAAATGAAACCATGCAAG...AGAAGATTCATTCGGTGCTAGAATTAGTTTAGCTTTATAAATGGGACTGTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp GTCTTTCACATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACTTTTCCTCCACTTCCTaGATTTTCTGCCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: VFHISVHGIMDQLKILDYFSSTS*IFCLIF
Trigger: AAAGATGAGGCAGAAAATCAAGGAAGTGGAGGAAAA...GTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAATGTGAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp CAATTTGGCAAAACCATAGGAAAATGGACAGTTTCTACTTCAACTTACTGTGATAAACAAACTGATTCTTaGAGTCATGTGGATTGGCTT +
Preference number: 5 (lower is better)
Translates to: QFGKTIGKWTVSTSTYCDKQTDS*SHVDWL
Trigger: AAGCCAATCCACATGACTCAAAGAATCAGTTTGTTT...ATCACAGTAAGTTGAAGTAGAAACTGTCCATTTTCCTATGGTTTTGCCAAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS-3UTR CAA 90 bp ATTTCCGTACATGGTATAATGGACCAATTGAAAATTCTGGACTACAAATGCAAGATAGTCAACTGTTTCTaGAATGGGTCAGAACTTTGT +
Preference number: 5 (lower is better)
Translates to: ISVHGIMDQLKILDYKCKIVNCF*NGSELC
Trigger: ACAAAGTTCTGACCCATTCAAGAAACAGTTGACTAT...CTTGCATTTGTAGTCCAGAATTTTCAATTGGTCCATTATACCATGTACGGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117237.2
ENSMUST00000231375.2
CDS GCA 72 bp ACTCGCTTTAATATCAAGTGTTCCCAAAAGACCAGTTaGTTGAGGAGTGGTGGCATATCCAGGAAGCTGATG +
Preference number: 6 (lower is better)
Translates to: TRFNIKCSQKTS*LRSGGISRKLM
Trigger: CATCAGCTTCCTGGATATGCCACCACTCCTCAAGCAACTGGTCTTTTGGGAACACTTGATATTAAAGCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS CAA 72 bp CGCTTTAATATCAAGTGTTCCCAAAAGACCAGTTGCTaGAGGAGTGGTGGCATATCCAGGAAGCTGATGAGA +
Preference number: 6 (lower is better)
Translates to: RFNIKCSQKTSC*RSGGISRKLMR
Trigger: TCTCATCAGCTTCCTGGATATGCCACCACTCCTCAAGCAACTGGTCTTTTGGGAACACTTGATATTAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2
CDS CAA 72 bp AGAAAATTCACCATAGAAGAGTCTTTAGTGTTAGCATaGGCATTACTCGCTTTAATATCAAGTGTTCCCAAA +
Preference number: 6 (lower is better)
Translates to: RKFTIEESLVLA*ALLALISSVPK
Trigger: TTTGGGAACACTTGATATTAAAGCGAGTAATGCCAATGCTAACACTAAAGACTCTTCTATGGTGAATTTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238887.2