RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for QRICH2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070331

Ensembl transcript IDs: ENSMUST00000093909.12, ENSMUST00000208602.2

Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GGGTGTGCCACACCCTGCCGGGCCTTGCCAGGGTGTGCCACACCCTaGCGGGCCATGCCAGGGTGTGCCACACCCTGCCGGGCCATGCCA +
Preference number: 5 (lower is better)
Translates to: GCATPCRALPGCATP*RAMPGCATPCRAMP
Trigger: TGGCATGGCCCGGCAGGGTGTGGCACACCCTGGCATGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACACCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 90 bp GGTTGTGCCACACCCTGCCGGGCCTTGCCAGGGTGTGCCACACCCTaGCGGGCCTTGCCAGGGTGTGCCACACCCTGCCGGGCCATGCCA +
Preference number: 5 (lower is better)
Translates to: GCATPCRALPGCATP*RALPGCATPCRAMP
Trigger: TGGCATGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACAACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 90 bp CACCCTGCCGGGCCATGCCAGGGTGTGCCACACCCTGCCGGGCCATaGCAGGTTGTGCCAAACCCTGCCGGGCCATGCCAGATTGTACCA +
Preference number: 5 (lower is better)
Translates to: HPAGPCQGVPHPAGP*QVVPNPAGPCQIVP
Trigger: TGGTACAATCTGGCATGGCCCGGCAGGGTTTGGCACAACCTGGCATGGCCCGGCAGGGTGTGGCACACCCTGGCATGGCCCGGCAGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 90 bp TCACTAGGTGCTCCAGGTTGTGCCAAGTCAGGTTGTGCCACACCCTaGCGGGCCTTGCCAGGGTGTGCCACACCCTGCCGGGCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: SLGAPGCAKSGCATP*RALPGCATPCRALP
Trigger: TGGCAAGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACAACCTGACTTGGCACAACCTGGAGCACCTAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp GACAGGTGGCCTCGGGGTCGATCTGGCCGGGCACTAGGCAGGCGGTaGACTTGTGTGGGGTTATGCTCATGGAGAGCAGCGTGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: DRWPRGRSGRALGRR*TCVGLCSWRAAWRS
Trigger: GCTCCTCCACGCTGCTCTCCATGAGCATAACCCCACACAAGTCCACCGCCTGCCTAGTGCCCGGCCAGATCGACCCCGAGGCCACCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp CTCACATCCAGACTGCAGGCCGGACAGGTGGCCTCGGGGTCGATCTaGCCGGGCACTAGGCAGGCGGTGGACTTGTGTGGGGTTATGCTC +
Preference number: 5 (lower is better)
Translates to: LTSRLQAGQVASGSI*PGTRQAVDLCGVML
Trigger: GAGCATAACCCCACACAAGTCCACCGCCTGCCTAGTGCCCGGCCAGATCGACCCCGAGGCCACCTGTCCGGCCTGCAGTCTGGATGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS TCA 90 bp GCATGGCAGCCGCCTCGTCGGCCTGGTAGAGTGGAGGGCGCTCTTTaGGCTGCTGCCGCAGTGATTTCCAGCGGTCCTCCAGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: AWQPPRRPGRVEGAL*AAAAVISSGPPASA
Trigger: AGCAGATGCTGGAGGACCGCTGGAAATCACTGCGGCAGCAGCTCAAAGAGCGCCCTCCACTCTACCAGGCCGACGAGGCGGCTGCCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp CTATCATCTGTGCACTCTGAGGCCGAGAGGGTGGCGAGATCATGTTaGCCAGGCTTGGCTGCCTGTGTGCGTGGGGCCGGGCATGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSSVHSEAERVARSC*PGLAACVRGAGHAG
Trigger: CCCAGCATGCCCGGCCCCACGCACACAGGCAGCCAAGCCTGGGCAACATGATCTCGCCACCCTCTCGGCCTCAGAGTGCACAGATGATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp CATGGGTGGCTGAGGCACTGGGTGTGCAGCAGCTCTCGGATCATCTaGCTGCTGGCCTTCACAGAGCCTCCGAAGTGGACCTGCACCTTC +
Preference number: 5 (lower is better)
Translates to: HGWLRHWVCSSSRII*LLAFTEPPKWTCTF
Trigger: GAAGGTGCAGGTCCACTTCGGAGGCTCTGTGAAGGCCAGCAGCCAGATGATCCGAGAGCTGCTGCACACCCAGTGCCTCAGCCACCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp CCGTCGAGGCCCAGGATGTCAACCTCATCATGCTTCATGGCGATCTaGATCTCCTCCAGTGGAGACAGGTGCTGCGGGCGGTTTCGCCGG +
Preference number: 5 (lower is better)
Translates to: PSRPRMSTSSCFMAI*ISSSGDRCCGRFRR
Trigger: CCGGCGAAACCGCCCGCAGCACCTGTCTCCACTGGAGGAGATCCAGATCGCCATGAAGCATGATGAGGTTGACATCCTGGGCCTCGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS TCA 90 bp GTCGGCCTGGTAGAGTGGAGGGCGCTCTTTGAGCTGCTGCCGCAGTaGTTTCCAGCGGTCCTCCAGCATCTGCTTCAACGGATCCAGCTC +
Preference number: 5 (lower is better)
Translates to: VGLVEWRALFELLPQ*FPAVLQHLLQRIQL
Trigger: GAGCTGGATCCGTTGAAGCAGATGCTGGAGGACCGCTGGAAATCACTGCGGCAGCAGCTCAAAGAGCGCCCTCCACTCTACCAGGCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp AAAAGGAGGTGGGGCCAAGTCAGGCTGACCCAAACCCTGAGGGCCTaGACCAGGCTCAACCATCCCAGGCTGTATCCTGTCCAGCCTAGC +
Preference number: 5 (lower is better)
Translates to: KRRWGQVRLTQTLRA*TRLNHPRLYPVQPS
Trigger: GCTAGGCTGGACAGGATACAGCCTGGGATGGTTGAGCCTGGTGCAGGCCCTCAGGGTTTGGGTCAGCCTGACTTGGCCCCACCTCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp TGCTTTGCTGTCCGCTATCATCTGTGCACTCTGAGGCCGAGAGGGTaGCGAGATCATGTTGCCCAGGCTTGGCTGCCTGTGTGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: CFAVRYHLCTLRPRG*RDHVAQAWLPVCVG
Trigger: CCCCACGCACACAGGCAGCCAAGCCTGGGCAACATGATCTCGCCACCCTCTCGGCCTCAGAGTGCACAGATGATAGCGGACAGCAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp CTGATCTACGCCTACTGCTATCAACCCTTGCTGAGCCGTGGGCCATaGTCCCTGACCACTGTCACGCACAGCAGCCTGTTCCGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: LIYAYCYQPLLSRGP*SLTTVTHSSLFRAL
Trigger: GAGGGCACGGAACAGGCTGCTGTGCGTGACAGTGGTCAGGGACCATGGCCCACGGCTCAGCAAGGGTTGATAGCAGTAGGCGTAGATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 90 bp CCGGGAGTGCATGCTGTGCAGACGCCCCACGCTTCTCTCCATCTGTaGCATGTCAACCCGAGGGAAGCTGCTGCCCAGCTTCAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: PGVHAVQTPHASLHL*HVNPREAAAQLQVS
Trigger: AGAAACCTGAAGCTGGGCAGCAGCTTCCCTCGGGTTGACATGTCACAGATGGAGAGAAGCGTGGGGCGTCTGCACAGCATGCACTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp CGGATCATCTGGCTGCTGGCCTTCACAGAGCCTCCGAAGTGGACCTaGACCTTCTCCATGTCCATCAGCATCCGGGAGTGCATGCTGTGC +
Preference number: 5 (lower is better)
Translates to: RIIWLLAFTEPPKWT*TFSMSISIRECMLC
Trigger: GCACAGCATGCACTCCCGGATGCTGATGGACATGGAGAAGGTGCAGGTCCACTTCGGAGGCTCTGTGAAGGCCAGCAGCCAGATGATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp GTGGCTGCCCCCACAGCGACGGGATACAGTCGAGTAGCTGTAATCTaGTGTGTCTGCTCCCCGTTTGTAGCATGGGTGGCTGAGGCACTG +
Preference number: 5 (lower is better)
Translates to: VAAPTATGYSRVAVI*CVCSPFVAWVAEAL
Trigger: CAGTGCCTCAGCCACCCATGCTACAAACGGGGAGCAGACACAGCAGATTACAGCTACTCGACTGTATCCCGTCGCTGTGGGGGCAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp TGGGCCATGGTCCCTGACCACTGTCACGCACAGCAGCCTGTTCCGTaGCCTCTCGGTCCATTCCAGGAAGCATCATGCCTTGCTGATACG +
Preference number: 5 (lower is better)
Translates to: WAMVPDHCHAQQPVP*PLGPFQEASCLADT
Trigger: CGTATCAGCAAGGCATGATGCTTCCTGGAATGGACCGAGAGGGCACGGAACAGGCTGCTGTGCGTGACAGTGGTCAGGGACCATGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 90 bp AGCTGTAATCTGCTGTGTCTGCTCCCCGTTTGTAGCATGGGTGGCTaGGGCACTGGGTGTGCAGCAGCTCTCGGATCATCTGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SCNLLCLLPVCSMGG*GTGCAAALGSSGCW
Trigger: CCAGCAGCCAGATGATCCGAGAGCTGCTGCACACCCAGTGCCTCAGCCACCCATGCTACAAACGGGGAGCAGACACAGCAGATTACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS TCA 90 bp TGCCCTGAAGGAACTGCTTTGCTGTCCGCTATCATCTGTGCACTCTaGGGCCGAGAGGGTGGCGAGATCATGTTGCCCAGGCTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: CPEGTALLSAIICAL*GREGGEIMLPRLGC
Trigger: GCAGCCAAGCCTGGGCAACATGATCTCGCCACCCTCTCGGCCTCAGAGTGCACAGATGATAGCGGACAGCAAAGCAGTTCCTTCAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp CCGAAGTGGACCTGCACCTTCTCCATGTCCATCAGCATCCGGGAGTaGATGCTGTGCAGACGCCCCACGCTTCTCTCCATCTGTGACATG +
Preference number: 5 (lower is better)
Translates to: PKWTCTFSMSISIRE*MLCRRPTLLSICDM
Trigger: CATGTCACAGATGGAGAGAAGCGTGGGGCGTCTGCACAGCATGCACTCCCGGATGCTGATGGACATGGAGAAGGTGCAGGTCCACTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp CCCACAGCGACGGGATACAGTCGAGTAGCTGTAATCTGCTGTGTCTaGTCCCCGTTTGTAGCATGGGTGGCTGAGGCACTGGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: PTATGYSRVAVICCV*SPFVAWVAEALGVQ
Trigger: CTGCACACCCAGTGCCTCAGCCACCCATGCTACAAACGGGGAGCAGACACAGCAGATTACAGCTACTCGACTGTATCCCGTCGCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp CACACCAGGCTGAACTGGACCTTGCTGGACCATGCCAGGCTGAACTaGACCTGCTTGCAACACACCAGGCTGAACTGGACCTTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: HTRLNWTLLDHARLN*TCLQHTRLNWTLLD
Trigger: GTCCAGCAAGGTCCAGTTCAGCCTGGTGTGTTGCAAGCAGGTGCAGTTCAGCCTGGCATGGTCCAGCAAGGTCCAGTTCAGCCTGGTGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp AGCTCTCGGATCATCTGGCTGCTGGCCTTCACAGAGCCTCCGAAGTaGACCTGCACCTTCTCCATGTCCATCAGCATCCGGGAGTGCATG +
Preference number: 5 (lower is better)
Translates to: SSRIIWLLAFTEPPK*TCTFSMSISIRECM
Trigger: CATGCACTCCCGGATGCTGATGGACATGGAGAAGGTGCAGGTCCACTTCGGAGGCTCTGTGAAGGCCAGCAGCCAGATGATCCGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp GATGTCAACCTCATCATGCTTCATGGCGATCTGGATCTCCTCCAGTaGAGACAGGTGCTGCGGGCGGTTTCGCCGGTAGGGGTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: DVNLIMLHGDLDLLQ*RQVLRAVSPVGVGE
Trigger: CTCACCTACCCCTACCGGCGAAACCGCCCGCAGCACCTGTCTCCACTGGAGGAGATCCAGATCGCCATGAAGCATGATGAGGTTGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp AGATGTGTCCGTCGAGGCCCAGGATGTCAACCTCATCATGCTTCATaGCGATCTGGATCTCCTCCAGTGGAGACAGGTGCTGCGGGCGGT +
Preference number: 5 (lower is better)
Translates to: RCVRRGPGCQPHHAS*RSGSPPVETGAAGG
Trigger: ACCGCCCGCAGCACCTGTCTCCACTGGAGGAGATCCAGATCGCCATGAAGCATGATGAGGTTGACATCCTGGGCCTCGACGGACACATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp ATCCATGCTGATCTACGCCTACTGCTATCAACCCTTGCTGAGCCGTaGGCCATGGTCCCTGACCACTGTCACGCACAGCAGCCTGTTCCG +
Preference number: 5 (lower is better)
Translates to: IHADLRLLLSTLAEP*AMVPDHCHAQQPVP
Trigger: CGGAACAGGCTGCTGTGCGTGACAGTGGTCAGGGACCATGGCCCACGGCTCAGCAAGGGTTGATAGCAGTAGGCGTAGATCAGCATGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 90 bp CCCCTGTTGGCTACCCTGCAGACTGGCTATGTCTGTAGGGATGGATaGATGGCTCACATTCGACTGCAGGAGACGCCCCTCAGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: PLLATLQTGYVCRDG*MAHIRLQETPLRGD
Trigger: GTCTCCTCTGAGGGGCGTCTCCTGCAGTCGAATGTGAGCCATTCATCCATCCCTACAGACATAGCCAGTCTGCAGGGTAGCCAACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS TCA 90 bp CTTTCTTCCCCTAGCTGCTCCATGCCAGGCTGCACCAAACCAAGTTaGGCTGCACCTGGCTGCATCAGGCCATACGGAGTCAGGAGAGAC +
Preference number: 5 (lower is better)
Translates to: LSSPSCSMPGCTKPS*AAPGCIRPYGVRRD
Trigger: GTCTCTCCTGACTCCGTATGGCCTGATGCAGCCAGGTGCAGCTCAACTTGGTTTGGTGCAGCCTGGCATGGAGCAGCTAGGGGAAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 90 bp ACCTGCACCTTCTCCATGTCCATCAGCATCCGGGAGTGCATGCTGTaGAGACGCCCCACGCTTCTCTCCATCTGTGACATGTCAACCCGA +
Preference number: 5 (lower is better)
Translates to: TCTFSMSISIRECML*RRPTLLSICDMSTR
Trigger: TCGGGTTGACATGTCACAGATGGAGAGAAGCGTGGGGCGTCTGCACAGCATGCACTCCCGGATGCTGATGGACATGGAGAAGGTGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp GCCCCACGCTTCTCTCCATCTGTGACATGTCAACCCGAGGGAAGCTaGTGCCCAGCTTCAGGTTTCTGCTTTGCTGTCGGATCTGCTCTA +
Preference number: 5 (lower is better)
Translates to: APRFSPSVTCQPEGS*CPASGFCFAVGSAL
Trigger: TAGAGCAGATCCGACAGCAAAGCAGAAACCTGAAGCTGGGCAGCAGCTTCCCTCGGGTTGACATGTCACAGATGGAGAGAAGCGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp AGTGGACCTGCACCTTCTCCATGTCCATCAGCATCCGGGAGTGCATaGTGTGCAGACGCCCCACGCTTCTCTCCATCTGTGACATGTCAA +
Preference number: 5 (lower is better)
Translates to: SGPAPSPCPSASGSA*CADAPRFSPSVTCQ
Trigger: TTGACATGTCACAGATGGAGAGAAGCGTGGGGCGTCTGCACAGCATGCACTCCCGGATGCTGATGGACATGGAGAAGGTGCAGGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp AGCTCCTTCTCGATGTCAGACACGGTGACTCTGAGGATGCCCAGCTaGAAGCTCAGATGGTTAGGTTTCACTCCCTTCCCTCCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SSFSMSDTVTLRMPS*KLRWLGFTPFPPVV
Trigger: CACCACCGGAGGGAAGGGAGTGAAACCTAACCATCTGAGCTTGCAGCTGGGCATCCTCAGAGTCACCGTGTCTGACATCGAGAAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 90 bp GTAGGTAAAGAGACGCCTCAGAGACAGAGTTCTCCATGGTGGCCTTaGCTCGGTCCTGGCTCTCTCTCAGCTCGTTCAGCTCCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: VGKETPQRQSSPWWP*LGPGSLSARSAPSR
Trigger: TCGAGAAGGAGCTGAACGAGCTGAGAGAGAGCCAGGACCGAGGCAAGGCCACCATGGAGAACTCTGTCTCTGAGGCGTCTCTTTACCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp AGTCGAGTAGCTGTAATCTGCTGTGTCTGCTCCCCGTTTGTAGCATaGGTGGCTGAGGCACTGGGTGTGCAGCAGCTCTCGGATCATCTG +
Preference number: 5 (lower is better)
Translates to: SRVAVICCVCSPFVA*VAEALGVQQLSDHL
Trigger: CAGATGATCCGAGAGCTGCTGCACACCCAGTGCCTCAGCCACCCATGCTACAAACGGGGAGCAGACACAGCAGATTACAGCTACTCGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp GATCCTGTAGGTAAAGAGACGCCTCAGAGACAGAGTTCTCCATGGTaGCCTTGCCTCGGTCCTGGCTCTCTCTCAGCTCGTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: DPVGKETPQRQSSPW*PCLGPGSLSARSAP
Trigger: AGGAGCTGAACGAGCTGAGAGAGAGCCAGGACCGAGGCAAGGCCACCATGGAGAACTCTGTCTCTGAGGCGTCTCTTTACCTACAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp GCTGATCCTGTAGGTAAAGAGACGCCTCAGAGACAGAGTTCTCCATaGTGGCCTTGCCTCGGTCCTGGCTCTCTCTCAGCTCGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: ADPVGKETPQRQSSP*WPCLGPGSLSARSA
Trigger: AGCTGAACGAGCTGAGAGAGAGCCAGGACCGAGGCAAGGCCACCATGGAGAACTCTGTCTCTGAGGCGTCTCTTTACCTACAGGATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 90 bp CGGAACGGTGCCCTGGCATGCTCGAAATTATGGGGGTCACAGAGATaGCTTGTCCAGTCACAGTTGTCTCCAAGGGACGGTCACAGGACA +
Preference number: 5 (lower is better)
Translates to: RNGALACSKLWGSQR*LVQSQLSPRDGHRT
Trigger: TGTCCTGTGACCGTCCCTTGGAGACAACTGTGACTGGACAAGTCATCTCTGTGACCCCCATAATTTCGAGCATGCCAGGGCACCGTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp TCCAGCTTGCTGTCCATCTCTGCCAGGAGCTTATCCAGAAGTTTCTaGCAGTCTTGCTCCTGTCCGCTCATCTTGGCCACCAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSLLSISARSLSRSF*QSCSCPLILATSSC
Trigger: GCAGGAACTGGTGGCCAAGATGAGCGGACAGGAGCAAGACTGGCAGAAACTTCTGGATAAGCTCCTGGCAGAGATGGACAGCAAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp CAGAGGAGACTGGTCTGTCTTTCTTTTGCCCTGAAGGAACTGCTTTaGTGTCCGCTATCATCTGTGCACTCTGAGGCCGAGAGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: QRRLVCLSFALKELL*CPLSSVHSEAERVA
Trigger: CGCCACCCTCTCGGCCTCAGAGTGCACAGATGATAGCGGACAGCAAAGCAGTTCCTTCAGGGCAAAAGAAAGACAGACCAGTCTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp AACTGCACCTGGTTGGACCATGCCAGGCAGAACTCCACGTGGTTGTaGCAGGCCAGGCAGAATTCCATGTGGTTGTGCCATATCAAGCTG +
Preference number: 5 (lower is better)
Translates to: NCTWLDHARQNSTWL*QARQNSMWLCHIKL
Trigger: CAGCTTGATATGGCACAACCACATGGAATTCTGCCTGGCCTGGCACAACCACGTGGAGTTCTGCCTGGCATGGTCCAACCAGGTGCAGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp TCAATGAGGTTGCTCGTGGTAATGTTGAGCTTCTCACAGTCACCCTaGACTTGTAGGATGGCGCTCTGCACGTGGCCCAGCAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SMRLLVVMLSFSQSP*TCRMALCTWPSSSS
Trigger: TGAGGAGCTGCTGGGCCACGTGCAGAGCGCCATCCTACAAGTCCAGGGTGACTGTGAGAAGCTCAACATTACCACGAGCAACCTCATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp TGTTGGCTACCCTGCAGACTGGCTATGTCTGTAGGGATGGATGAATaGCTCACATTCGACTGCAGGAGACGCCCCTCAGAGGAGACTGGT +
Preference number: 5 (lower is better)
Translates to: CWLPCRLAMSVGMDE*LTFDCRRRPSEETG
Trigger: ACCAGTCTCCTCTGAGGGGCGTCTCCTGCAGTCGAATGTGAGCCATTCATCCATCCCTACAGACATAGCCAGTCTGCAGGGTAGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp ATTTGTGCTTGCCAACGGTTGCTGTGGACGAATCCGAGCTCCCTTTaGAGGCCCTCCAGCCGTCACCAATCACTTGTTCTAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: ICACQRLLWTNPSSL*RPSSRHQSLVLALP
Trigger: GGGAAGAGCTAGAACAAGTGATTGGTGACGGCTGGAGGGCCTCCAAAGGGAGCTCGGATTCGTCCACAGCAACCGTTGGCAAGCACAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp TTGGTCTGTACCAGGTGTTACCAAACCCCGCTGATCCATATGTTGTaGGGGCAGTCCTTGCTGGCCTGTGCCTGGTATCGGCAATCCATG +
Preference number: 5 (lower is better)
Translates to: LVCTRCYQTPLIHML*GQSLLACAWYRQSM
Trigger: CATGGATTGCCGATACCAGGCACAGGCCAGCAAGGACTGCCCCCACAACATATGGATCAGCGGGGTTTGGTAACACCTGGTACAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 90 bp TGTCCGCTCATCTTGGCCACCAGTTCCTGCATCATGTGGTTCAGCTaGTCTGTAGTGGCATCAAACTGGATCCGGCTCACTTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: CPLILATSSCIMWFS*SVVASNWIRLTLDA
Trigger: GGCATCCAAAGTGAGCCGGATCCAGTTTGATGCCACTACAGAGCAGCTGAACCACATGATGCAGGAACTGGTGGCCAAGATGAGCGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp CTGTCCATCTCTGCCAGGAGCTTATCCAGAAGTTTCTGCCAGTCTTaGTCCTGTCCGCTCATCTTGGCCACCAGTTCCTGCATCATGTGG +
Preference number: 5 (lower is better)
Translates to: LSISARSLSRSFCQS*SCPLILATSSCIMW
Trigger: CCACATGATGCAGGAACTGGTGGCCAAGATGAGCGGACAGGAGCAAGACTGGCAGAAACTTCTGGATAAGCTCCTGGCAGAGATGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp CCACGCTTCTCTCCATCTGTGACATGTCAACCCGAGGGAAGCTGCTaGCCAGCTTCAGGTTTCTGCTTTGCTGTCGGATCTGCTCTAGTT +
Preference number: 5 (lower is better)
Translates to: PRFSPSVTCQPEGSC*PASGFCFAVGSALV
Trigger: AACTAGAGCAGATCCGACAGCAAAGCAGAAACCTGAAGCTGGGCAGCAGCTTCCCTCGGGTTGACATGTCACAGATGGAGAGAAGCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp GACTGCAGGAGACGCCCCTCAGAGGAGACTGGTCTGTCTTTCTTTTaGCCTGAAGGAACTGCTTTGCTGTCCGCTATCATCTGTGCACTC +
Preference number: 5 (lower is better)
Translates to: DCRRRPSEETGLSFF*PEGTALLSAIICAL
Trigger: GAGTGCACAGATGATAGCGGACAGCAAAGCAGTTCCTTCAGGGCAAAAGAAAGACAGACCAGTCTCCTCTGAGGGGCGTCTCCTGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp TCTTGCTCCTGTCCGCTCATCTTGGCCACCAGTTCCTGCATCATGTaGTTCAGCTGCTCTGTAGTGGCATCAAACTGGATCCGGCTCACT +
Preference number: 5 (lower is better)
Translates to: SCSCPLILATSSCIM*FSCSVVASNWIRLT
Trigger: AGTGAGCCGGATCCAGTTTGATGCCACTACAGAGCAGCTGAACCACATGATGCAGGAACTGGTGGCCAAGATGAGCGGACAGGAGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS TCA 90 bp GTTCCTGCAGCTCAGAAGCCTGCTTCAGAATTTTCACATCTTCTATaGGGTCTTGGAGCACACTCGTGGGCTTGGTCAGGCTGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: VPAAQKPASEFSHLL*GLGAHSWAWSGWES
Trigger: GGACTCCCAGCCTGACCAAGCCCACGAGTGTGCTCCAAGACCTCATAGAAGATGTGAAAATTCTGAAGCAGGCTTCTGAGCTGCAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 90 bp CGTCCAAGTCTTTCAACTGTTCCTTCAGTTCTAAATAGAGGGAGATaGGCTCCCCGATCAGGCGCAGTGTTTCCACCGCCATGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: RPSLSTVPSVLNRGR*APRSGAVFPPPWGS
Trigger: GCTTCCCCATGGCGGTGGAAACACTGCGCCTGATCGGGGAGCTCATCTCCCTCTATTTAGAACTGAAGGAACAGTTGAAAGACTTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 90 bp CAGCTGCTCTGTAGTGGCATCAAACTGGATCCGGCTCACTTTGGATaGCAGAGCGCTCTTGTCGGCTTTCTCATCAATCTCCATCTCCAG +
Preference number: 5 (lower is better)
Translates to: QLLCSGIKLDPAHFG*QSALVGFLINLHLQ
Trigger: CTGGAGATGGAGATTGATGAGAAAGCCGACAAGAGCGCTCTGGCATCCAAAGTGAGCCGGATCCAGTTTGATGCCACTACAGAGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp TTCTGCCAGTCTTGCTCCTGTCCGCTCATCTTGGCCACCAGTTCCTaGATCATGTGGTTCAGCTGCTCTGTAGTGGCATCAAACTGGATC +
Preference number: 5 (lower is better)
Translates to: FCQSCSCPLILATSS*IMWFSCSVVASNWI
Trigger: GATCCAGTTTGATGCCACTACAGAGCAGCTGAACCACATGATGCAGGAACTGGTGGCCAAGATGAGCGGACAGGAGCAAGACTGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 90 bp AACCGGGCAGATATGCACCAGGCTGTACCCCGCCACTCTGATCTGTaGTTGGTTGAACCCAAACAGGCTGCCCTGTGTCTGTTTGTATTA +
Preference number: 5 (lower is better)
Translates to: NRADMHQAVPRHSDL*LVEPKQAALCLFVL
Trigger: TAATACAAACAGACACAGGGCAGCCTGTTTGGGTTCAACCAAGCACAGATCAGAGTGGCGGGGTACAGCCTGGTGCATATCTGCCCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp AGTTCCTGCATCATGTGGTTCAGCTGCTCTGTAGTGGCATCAAACTaGATCCGGCTCACTTTGGATGCCAGAGCGCTCTTGTCGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SSCIMWFSCSVVASN*IRLTLDARALLSAF
Trigger: GAAAGCCGACAAGAGCGCTCTGGCATCCAAAGTGAGCCGGATCCAGTTTGATGCCACTACAGAGCAGCTGAACCACATGATGCAGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp TGCAGTTGTTGGAGCTGCTGCAGCTGCTGCAGTTGTTGGAGCTGCTaGAGCTTAGCCTTGTTGTGTTTTGTCACTCCTGGGGCATCTTTC +
Preference number: 5 (lower is better)
Translates to: CSCWSCCSCCSCWSC*SLALLCFVTPGASF
Trigger: GAAAGATGCCCCAGGAGTGACAAAACACAACAAGGCTAAGCTCCAGCAGCTCCAACAACTGCAGCAGCTGCAGCAGCTCCAACAACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 90 bp AGCTCAGAAGCCTGCTTCAGAATTTTCACATCTTCTATGAGGTCTTaGAGCACACTCGTGGGCTTGGTCAGGCTGGGAGTCCTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: SSEACFRIFTSSMRS*STLVGLVRLGVLEG
Trigger: GCCCTCAAGGACTCCCAGCCTGACCAAGCCCACGAGTGTGCTCCAAGACCTCATAGAAGATGTGAAAATTCTGAAGCAGGCTTCTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 90 bp ACTTCTTGGAGGTTGAGGCTCTTGAGAATGGACACTATCAGTGTGTaGAAGGCCGTAAAGTTCACCGCGCCCACCTCTGGAGTGCCAATT +
Preference number: 5 (lower is better)
Translates to: TSWRLRLLRMDTISV*KAVKFTAPTSGVPI
Trigger: AATTGGCACTCCAGAGGTGGGCGCGGTGAACTTTACGGCCTTGCACACACTGATAGTGTCCATTCTCAAGAGCCTCAACCTCCAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp TTGAAATATACCACGAGGAAATATACCAGGGTGAATAAAAGGAGGTaGGGCCAAGTCAGGCTGACCCAAACCCTGAGGGCCTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: LKYTTRKYTRVNKRR*GQVRLTQTLRACTR
Trigger: CCTGGTGCAGGCCCTCAGGGTTTGGGTCAGCCTGACTTGGCCCCACCTCCTTTTATTCACCCTGGTATATTTCCTCGTGGTATATTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 90 bp TTTGTTAGGGATACCTGTTGGGTCACCAGAGCTATCTCCTCTTCCTaGTGGAGTTCAGGGACTGAGATCTGGTCTATTTGTGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: FVRDTCWVTRAISSS*WSSGTEIWSICVAM
Trigger: CATGGCCACACAAATAGACCAGATCTCAGTCCCTGAACTCCAGCAGGAAGAGGAGATAGCTCTGGTGACCCAACAGGTATCCCTAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp TCTCTGCTGGAGATTCTTTCTATACCACCAGTGGAATCCAGAGCCTaGTCAGCAGCTCTGAGAAACATTCCACTCGGAAGGAGGTCACTT +
Preference number: 5 (lower is better)
Translates to: SLLEILSIPPVESRA*SAALRNIPLGRRSL
Trigger: AAGTGACCTCCTTCCGAGTGGAATGTTTCTCAGAGCTGCTGACCAGGCTCTGGATTCCACTGGTGGTATAGAAAGAATCTCCAGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp TCCACAAAACCATACTGGTACATTCTAGGCTGTACCAAGCCACGTTaGTCCATGCCAGGCTGCATAAAAGCACTCTGGTCCACTATAGGC +
Preference number: 5 (lower is better)
Translates to: STKPYWYILGCTKPR*SMPGCIKALWSTIG
Trigger: GCCTATAGTGGACCAGAGTGCTTTTATGCAGCCTGGCATGGACCAACGTGGCTTGGTACAGCCTAGAATGTACCAGTATGGTTTTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 90 bp TTTTTCAGTTCCTTGTCAGGTCCTGATGGTGGCAGCCCACCACTCTaGGCTTTATCAACAGGTACTAATTCCTGGCCATACATTTCGGGG +
Preference number: 5 (lower is better)
Translates to: FFSSLSGPDGGSPPL*ALSTGTNSWPYISG
Trigger: CCCCGAAATGTATGGCCAGGAATTAGTACCTGTTGATAAAGCTCAGAGTGGTGGGCTGCCACCATCAGGACCTGACAAGGAACTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 90 bp TTGTCCTGCCGAACTTCCTTGTTCAACGTCTTTAGGCTCTTCAGCTaGTCTGCCAGGTCCTGGGGTATGGTCTTTTTGACTATCATTGTG +
Preference number: 5 (lower is better)
Translates to: LSCRTSLFNVFRLFS*SARSWGMVFLTIIV
Trigger: CACAATGATAGTCAAAAAGACCATACCCCAGGACCTGGCAGAGCAGCTGAAGAGCCTAAAGACGTTGAACAAGGAAGTTCGGCAGGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp ACCAGAGCTATCTCCTCTTCCTGCTGGAGTTCAGGGACTGAGATCTaGTCTATTTGTGTGGCCATGCCCTGTACTTTGTTGTCCATAGTT +
Preference number: 5 (lower is better)
Translates to: TRAISSSCWSSGTEI*SICVAMPCTLLSIV
Trigger: AACTATGGACAACAAAGTACAGGGCATGGCCACACAAATAGACCAGATCTCAGTCCCTGAACTCCAGCAGGAAGAGGAGATAGCTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp TGGAAAGCGAAGGTCTATGCTTGGTGTTACAAAGTCTGGCTGAGTTaGAGTGGGTTGTCTGAAACCACGTGGAAGTGTAGCAGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: WKAKVYAWCYKVWLS*SGLSETTWKCSRLK
Trigger: TTTCAACCTGCTACACTTCCACGTGGTTTCAGACAACCCACTCCAACTCAGCCAGACTTTGTAACACCAAGCATAGACCTTCGCTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp TTGACTATCATTGTGATCAGGTACTGGATTTTCTCGAAGTCAGTCTaGCCGGCCAGTTCCTCGTCCAAGTCTTTCAACTGTTCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LTIIVIRYWIFSKSV*PASSSSKSFNCSFS
Trigger: ACTGAAGGAACAGTTGAAAGACTTGGACGAGGAACTGGCCGGCCAGACTGACTTCGAGAAAATCCAGTACCTGATCACAATGATAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 90 bp TCCTTGTTCAACGTCTTTAGGCTCTTCAGCTGCTCTGCCAGGTCCTaGGGTATGGTCTTTTTGACTATCATTGTGATCAGGTACTGGATT +
Preference number: 5 (lower is better)
Translates to: SLFNVFRLFSCSARS*GMVFLTIIVIRYWI
Trigger: AATCCAGTACCTGATCACAATGATAGTCAAAAAGACCATACCCCAGGACCTGGCAGAGCAGCTGAAGAGCCTAAAGACGTTGAACAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 90 bp GGTTGTATAAAGCGTGACGTTAAGCTGGACTGTCTAAAACCTTGTTaGTCTGTACTAACTTGCATCAAACCAAGTGACACCAAGGTACGT +
Preference number: 5 (lower is better)
Translates to: GCIKRDVKLDCLKPC*SVLTCIKPSDTKVR
Trigger: ACGTACCTTGGTGTCACTTGGTTTGATGCAAGTTAGTACAGATCAACAAGGTTTTAGACAGTCCAGCTTAACGTCACGCTTTATACAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp GGGCCTTGCCAGGGTGTGCCACACCCTGCCGGGCCATaGCAGGGTGTGCCACACCCTGCCGGGCCATGCCAG +
Preference number: 6 (lower is better)
Translates to: GPCQGVPHPAGP*QGVPHPAGPCQ
Trigger: CTGGCATGGCCCGGCAGGGTGTGGCACACCCTGGCATGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp ACACCCTGCCGGGCCTTGCCAGGGTGTGCCACACCCTaGCGGGCCATGCCAGGGTGTGCCACACCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: TPCRALPGCATP*RAMPGCATPCR
Trigger: CCGGCAGGGTGTGGCACACCCTGGCATGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp GGGCCTTGCCAGGGTGTGCCACACCCTGCCGGGCCTTaGCAGGGTGTGCCACACCCTGCCGGGCCATGCCAG +
Preference number: 6 (lower is better)
Translates to: GPCQGVPHPAGP*QGVPHPAGPCQ
Trigger: CTGGCATGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp ACACCCTGCCGGGCCTTGCCAGGGTGTGCCACACCCTaGCGGGCCTTGCCAGGGTGTGCCACACCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: TPCRALPGCATP*RALPGCATPCR
Trigger: CCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp CGGGCCTTGCCAGGGTGTGCCACACCCTGCCGGGCCTaGCCAGGGTGTGCCACACCCTGCCGGGCCATGCCA +
Preference number: 6 (lower is better)
Translates to: RALPGCATPCRA*PGCATPCRAMP
Trigger: TGGCATGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp ACACCCTGCCGGGCCATGCCAGGGTGTGCCACACCCTaGCGGGCCATGCCAGGTTGTGCCAAACCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: TPCRAMPGCATP*RAMPGCAKPCR
Trigger: CCGGCAGGGTTTGGCACAACCTGGCATGGCCCGGCAGGGTGTGGCACACCCTGGCATGGCCCGGCAGGGTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp GGCTGCCTGTGTGCGTGGGGCCGGGCATGCTGGGCCTaGTGCAGCTGCTGCAGTTGTTGGAGCTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: GCLCAWGRACWA*CSCCSCWSCCS
Trigger: GCTGCAGCAGCTCCAACAACTGCAGCAGCTGCAGCAGGCCCAGCATGCCCGGCCCCACGCACACAGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp AGACTGCAGGCCGGACAGGTGGCCTCGGGGTCGATCTaGCCGGGCACTAGGCAGGCGGTGGACTTGTGTGGG +
Preference number: 6 (lower is better)
Translates to: RLQAGQVASGSI*PGTRQAVDLCG
Trigger: CCCACACAAGTCCACCGCCTGCCTAGTGCCCGGCCAGATCGACCCCGAGGCCACCTGTCCGGCCTGCAGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp AGGCCGAGAGGGTGGCGAGATCATGTTGCCCAGGCTTaGCTGCCTGTGTGCGTGGGGCCGGGCATGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RPRGWRDHVAQA*LPVCVGPGMLG
Trigger: GCCCAGCATGCCCGGCCCCACGCACACAGGCAGCCAAGCCTGGGCAACATGATCTCGCCACCCTCTCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp GAGGCCGAGAGGGTGGCGAGATCATGTTGCCCAGGCTaGGCTGCCTGTGTGCGTGGGGCCGGGCATGCTGGG +
Preference number: 6 (lower is better)
Translates to: EAERVARSCCPG*AACVRGAGHAG
Trigger: CCCAGCATGCCCGGCCCCACGCACACAGGCAGCCAAGCCTGGGCAACATGATCTCGCCACCCTCTCGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp GCTCCAGGTTGTGCCAAGTCAGGTTGTGCCACACCCTaGCGGGCCTTGCCAGGGTGTGCCACACCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: APGCAKSGCATP*RALPGCATPCR
Trigger: CCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACAACCTGACTTGGCACAACCTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp CTTGGTGGCTCACATCCAGACTGCAGGCCGGACAGGTaGCCTCGGGGTCGATCTGGCCGGGCACTAGGCAGG +
Preference number: 6 (lower is better)
Translates to: LGGSHPDCRPDR*PRGRSGRALGR
Trigger: CCTGCCTAGTGCCCGGCCAGATCGACCCCGAGGCCACCTGTCCGGCCTGCAGTCTGGATGTGAGCCACCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp TGTGCCAAGTCAGGTTGTGCCACACCCTGCCGGGCCTaGCCAGGGTGTGCCACACCCTGCCGGGCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: CAKSGCATPCRA*PGCATPCRALP
Trigger: TGGCAAGGCCCGGCAGGGTGTGGCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACAACCTGACTTGGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp CCGCCTCGTCGGCCTGGTAGAGTGGAGGGCGCTCTTTaGGCTGCTGCCGCAGTGATTTCCAGCGGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PPRRPGRVEGAL*AAAAVISSGPP
Trigger: TGGAGGACCGCTGGAAATCACTGCGGCAGCAGCTCAAAGAGCGCCCTCCACTCTACCAGGCCGACGAGGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp CCTCGGGGTCGATCTGGCCGGGCACTAGGCAGGCGGTaGACTTGTGTGGGGTTATGCTCATGGAGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: PRGRSGRALGRR*TCVGLCSWRAA
Trigger: CGCTGCTCTCCATGAGCATAACCCCACACAAGTCCACCGCCTGCCTAGTGCCCGGCCAGATCGACCCCGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp CTCACTAGGTGCTCCAGGTTGTGCCAAGTCAGGTTGTaGCACACCCTGCCGGGCCTTGCCAGGGTGTGCCAC +
Preference number: 6 (lower is better)
Translates to: LTRCSRLCQVRL*HTLPGLARVCH
Trigger: GTGGCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACAACCTGACTTGGCACAACCTGGAGCACCTAGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp GGGTCGATCTGGCCGGGCACTAGGCAGGCGGTGGACTaGTGTGGGGTTATGCTCATGGAGAGCAGCGTGGAG +
Preference number: 6 (lower is better)
Translates to: GSIWPGTRQAVD*CGVMLMESSVE
Trigger: CTCCACGCTGCTCTCCATGAGCATAACCCCACACAAGTCCACCGCCTGCCTAGTGCCCGGCCAGATCGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp GTCCTCACTAGGTGCTCCAGGTTGTGCCAAGTCAGGTaGTGCCACACCCTGCCGGGCCTTGCCAGGGTGTGC +
Preference number: 6 (lower is better)
Translates to: VLTRCSRLCQVR*CHTLPGLARVC
Trigger: GCACACCCTGGCAAGGCCCGGCAGGGTGTGGCACAACCTGACTTGGCACAACCTGGAGCACCTAGTGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp CGATCAGGCGCAGTGTTTCCACCGCCATGGGGAAGCTaGGAGGCAGTGACTCCTGCCGCTGCTGCTCTCGAC +
Preference number: 6 (lower is better)
Translates to: RSGAVFPPPWGS*EAVTPAAAALD
Trigger: GTCGAGAGCAGCAGCGGCAGGAGTCACTGCCTCCAAGCTTCCCCATGGCGGTGGAAACACTGCGCCTGATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp TGGCCTTCTTGGAGGGTCTGGAGGCAGCGAGGCCACTaGCCATGTCCTGTAGCTGCTCGTAGCGCTGGACCA +
Preference number: 6 (lower is better)
Translates to: WPSWRVWRQRGH*PCPVAARSAGP
Trigger: TGGTCCAGCGCTACGAGCAGCTACAGGACATGGTCAGTGGCCTCGCTGCCTCCAGACCCTCCAAGAAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp GGCACTGGGTGTGCAGCAGCTCTCGGATCATCTGGCTaGTGGCCTTCACAGAGCCTCCGAAGTGGACCTGCA +
Preference number: 6 (lower is better)
Translates to: GTGCAAALGSSG*WPSQSLRSGPA
Trigger: TGCAGGTCCACTTCGGAGGCTCTGTGAAGGCCAGCAGCCAGATGATCCGAGAGCTGCTGCACACCCAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp TGCACCCGGATGGACCATGCCAGGCTGAGCTGCACCTaGTTGCAACACACCAGGCTGAACTGGACCCTGCTG +
Preference number: 6 (lower is better)
Translates to: CTRMDHARLSCT*LQHTRLNWTLL
Trigger: CAGCAGGGTCCAGTTCAGCCTGGTGTGTTGCAAGCAGGTGCAGCTCAGCCTGGCATGGTCCATCCGGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp CTGAGCTGCACCCGGATGGACCATGCCAGGCTGAGCTaGACCTGCTTGCAACACACCAGGCTGAACTGGACC +
Preference number: 6 (lower is better)
Translates to: LSCTRMDHARLS*TCLQHTRLNWT
Trigger: GGTCCAGTTCAGCCTGGTGTGTTGCAAGCAGGTGCAGCTCAGCCTGGCATGGTCCATCCGGGTGCAGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp CTGAGGCACTGGGTGTGCAGCAGCTCTCGGATCATCTaGCTGCTGGCCTTCACAGAGCCTCCGAAGTGGACC +
Preference number: 6 (lower is better)
Translates to: LRHWVCSSSRII*LLAFTEPPKWT
Trigger: GGTCCACTTCGGAGGCTCTGTGAAGGCCAGCAGCCAGATGATCCGAGAGCTGCTGCACACCCAGTGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp ACCCGGATGGACCATGCCAGGCTGAGCTGCACCTGCTaGCAACACACCAGGCTGAACTGGACCCTGCTGGAC +
Preference number: 6 (lower is better)
Translates to: TRMDHARLSCTC*QHTRLNWTLLD
Trigger: GTCCAGCAGGGTCCAGTTCAGCCTGGTGTGTTGCAAGCAGGTGCAGCTCAGCCTGGCATGGTCCATCCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp TGTCCTGTAGCTGCTCGTAGCGCTGGACCAGCAGACTaGCTTGGTGGCTCACATCCAGACTGCAGGCCGGAC +
Preference number: 6 (lower is better)
Translates to: CPVAARSAGPAD*LGGSHPDCRPD
Trigger: GTCCGGCCTGCAGTCTGGATGTGAGCCACCAAGTCAGTCTGCTGGTCCAGCGCTACGAGCAGCTACAGGACA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp TGCTGCCGCAGTGATTTCCAGCGGTCCTCCAGCATCTaGTTCAACGGATCCAGCTCCAGGCGGTCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: CCRSDFQRSSSI*FNGSSSRRSSL
Trigger: CAAGCTGGACCGCCTGGAGCTGGATCCGTTGAAGCAGATGCTGGAGGACCGCTGGAAATCACTGCGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp TCCACCGCCATGGGGAAGCTTGGAGGCAGTGACTCCTaGCGCTGCTGCTCTCGACGAGTCTCGCTTACTGAT +
Preference number: 6 (lower is better)
Translates to: STAMGKLGGSDS*RCCSRRVSLTD
Trigger: ATCAGTAAGCGAGACTCGTCGAGAGCAGCAGCGGCAGGAGTCACTGCCTCCAAGCTTCCCCATGGCGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp CTAGGCAGGCGGTGGACTTGTGTGGGGTTATGCTCATaGAGAGCAGCGTGGAGGAGCTGCCCAGCATGCTCT +
Preference number: 6 (lower is better)
Translates to: LGRRWTCVGLCS*RAAWRSCPACS
Trigger: AGAGCATGCTGGGCAGCTCCTCCACGCTGCTCTCCATGAGCATAACCCCACACAAGTCCACCGCCTGCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp ACTGGGTGTGCAGCAGCTCTCGGATCATCTGGCTGCTaGCCTTCACAGAGCCTCCGAAGTGGACCTGCACCT +
Preference number: 6 (lower is better)
Translates to: TGCAAALGSSGC*PSQSLRSGPAP
Trigger: AGGTGCAGGTCCACTTCGGAGGCTCTGTGAAGGCCAGCAGCCAGATGATCCGAGAGCTGCTGCACACCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp CTCATCATGCTTCATGGCGATCTGGATCTCCTCCAGTaGAGACAGGTGCTGCGGGCGGTTTCGCCGGTAGGG +
Preference number: 6 (lower is better)
Translates to: LIMLHGDLDLLQ*RQVLRAVSPVG
Trigger: CCCTACCGGCGAAACCGCCCGCAGCACCTGTCTCCACTGGAGGAGATCCAGATCGCCATGAAGCATGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp GTCCGCTATCATCTGTGCACTCTGAGGCCGAGAGGGTaGCGAGATCATGTTGCCCAGGCTTGGCTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: VRYHLCTLRPRG*RDHVAQAWLPV
Trigger: CACAGGCAGCCAAGCCTGGGCAACATGATCTCGCCACCCTCTCGGCCTCAGAGTGCACAGATGATAGCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp GCCTACTGCTATCAACCCTTGCTGAGCCGTGGGCCATaGTCCCTGACCACTGTCACGCACAGCAGCCTGTTC +
Preference number: 6 (lower is better)
Translates to: AYCYQPLLSRGP*SLTTVTHSSLF
Trigger: GAACAGGCTGCTGTGCGTGACAGTGGTCAGGGACCATGGCCCACGGCTCAGCAAGGGTTGATAGCAGTAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp GTAGAGTGGAGGGCGCTCTTTGAGCTGCTGCCGCAGTaGTTTCCAGCGGTCCTCCAGCATCTGCTTCAACGG +
Preference number: 6 (lower is better)
Translates to: VEWRALFELLPQ*FPAVLQHLLQR
Trigger: CCGTTGAAGCAGATGCTGGAGGACCGCTGGAAATCACTGCGGCAGCAGCTCAAAGAGCGCCCTCCACTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS TCA 72 bp CATGCTGTGCAGACGCCCCACGCTTCTCTCCATCTGTaGCATGTCAACCCGAGGGAAGCTGCTGCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: HAVQTPHASLHL*HVNPREAAAQL
Trigger: AAGCTGGGCAGCAGCTTCCCTCGGGTTGACATGTCACAGATGGAGAGAAGCGTGGGGCGTCTGCACAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS TCA 72 bp CTGCTGTGTCTGCTCCCCGTTTGTAGCATGGGTGGCTaGGGCACTGGGTGTGCAGCAGCTCTCGGATCATCT +
Preference number: 6 (lower is better)
Translates to: LLCLLPVCSMGG*GTGCAAALGSS
Trigger: AGATGATCCGAGAGCTGCTGCACACCCAGTGCCTCAGCCACCCATGCTACAAACGGGGAGCAGACACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp GCACCTTCTCCATGTCCATCAGCATCCGGGAGTGCATaGTGTGCAGACGCCCCACGCTTCTCTCCATCTGTG +
Preference number: 6 (lower is better)
Translates to: APSPCPSASGSA*CADAPRFSPSV
Trigger: CACAGATGGAGAGAAGCGTGGGGCGTCTGCACAGCATGCACTCCCGGATGCTGATGGACATGGAGAAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp ACCTGCACCTTCTCCATGTCCATCAGCATCCGGGAGTaGATGCTGTGCAGACGCCCCACGCTTCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: TCTFSMSISIRE*MLCRRPTLLSI
Trigger: GATGGAGAGAAGCGTGGGGCGTCTGCACAGCATGCACTCCCGGATGCTGATGGACATGGAGAAGGTGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp GTCCCTGACCACTGTCACGCACAGCAGCCTGTTCCGTaGCCTCTCGGTCCATTCCAGGAAGCATCATGCCTT +
Preference number: 6 (lower is better)
Translates to: VPDHCHAQQPVP*PLGPFQEASCL
Trigger: AAGGCATGATGCTTCCTGGAATGGACCGAGAGGGCACGGAACAGGCTGCTGTGCGTGACAGTGGTCAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp CTGACTTGCACCAACTTGCATCAACCCAGGTGCATATaGACCTGGCTGCACCAGCCCGGGCTGAACTGCACC +
Preference number: 6 (lower is better)
Translates to: LTCTNLHQPRCI*TWLHQPGLNCT
Trigger: GGTGCAGTTCAGCCCGGGCTGGTGCAGCCAGGTGCATATGCACCTGGGTTGATGCAAGTTGGTGCAAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp GAGACGCCTCAGAGACAGAGTTCTCCATGGTGGCCTTaGCTCGGTCCTGGCTCTCTCTCAGCTCGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: ETPQRQSSPWWP*LGPGSLSARSA
Trigger: AGCTGAACGAGCTGAGAGAGAGCCAGGACCGAGGCAAGGCCACCATGGAGAACTCTGTCTCTGAGGCGTCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp GCTGTAATCTGCTGTGTCTGCTCCCCGTTTGTAGCATaGGTGGCTGAGGCACTGGGTGTGCAGCAGCTCTCG +
Preference number: 6 (lower is better)
Translates to: AVICCVCSPFVA*VAEALGVQQLS
Trigger: CGAGAGCTGCTGCACACCCAGTGCCTCAGCCACCCATGCTACAAACGGGGAGCAGACACAGCAGATTACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp CCCAGGATGTCAACCTCATCATGCTTCATGGCGATCTaGATCTCCTCCAGTGGAGACAGGTGCTGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: PRMSTSSCFMAI*ISSSGDRCCGR
Trigger: CCGCCCGCAGCACCTGTCTCCACTGGAGGAGATCCAGATCGCCATGAAGCATGATGAGGTTGACATCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp AGAGACGCCTCAGAGACAGAGTTCTCCATGGTGGCCTaGCCTCGGTCCTGGCTCTCTCTCAGCTCGTTCAGC +
Preference number: 6 (lower is better)
Translates to: RDASETEFSMVA*PRSWLSLSSFS
Trigger: GCTGAACGAGCTGAGAGAGAGCCAGGACCGAGGCAAGGCCACCATGGAGAACTCTGTCTCTGAGGCGTCTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp GGAACTGCTTTGCTGTCCGCTATCATCTGTGCACTCTaGGGCCGAGAGGGTGGCGAGATCATGTTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: GTALLSAIICAL*GREGGEIMLPR
Trigger: CCTGGGCAACATGATCTCGCCACCCTCTCGGCCTCAGAGTGCACAGATGATAGCGGACAGCAAAGCAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp CCTACAGGCACTGAACTGCGCCGATCTAAACCAGGCTaGGCTACACCACGCTGCTCTACCCTGAGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: PTGTELRRSKPG*ATPRCSTLSCS
Trigger: AGAACAGCTCAGGGTAGAGCAGCGTGGTGTAGCGCAGCCTGGTTTAGATCGGCGCAGTTCAGTGCCTGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp ACCATCCTGACTTGCACCAACTTGCATCAACCCAGGTaGATATGCACCTGGCTGCACCAGCCCGGGCTGAAC +
Preference number: 6 (lower is better)
Translates to: TILTCTNLHQPR*ICTWLHQPGLN
Trigger: GTTCAGCCCGGGCTGGTGCAGCCAGGTGCATATGCACCTGGGTTGATGCAAGTTGGTGCAAGTCAGGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp CTGAACTGGACCTTGCTGGACCATGCCAGGCTGAACTaGACCTGCTTGCAACACACCAGGCTGAACTGGACC +
Preference number: 6 (lower is better)
Translates to: LNWTLLDHARLN*TCLQHTRLNWT
Trigger: GGTCCAGTTCAGCCTGGTGTGTTGCAAGCAGGTGCAGTTCAGCCTGGCATGGTCCAGCAAGGTCCAGTTCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp ATGGGGAAGCTTGGAGGCAGTGACTCCTGCCGCTGCTaGTCTCGACGAGTCTCGCTTACTGATGAGAACTGC +
Preference number: 6 (lower is better)
Translates to: MGKLGGSDSCRC*SRRVSLTDENC
Trigger: GCAGTTCTCATCAGTAAGCGAGACTCGTCGAGAGCAGCAGCGGCAGGAGTCACTGCCTCCAAGCTTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp ATCATCTGGCTGCTGGCCTTCACAGAGCCTCCGAAGTaGACCTGCACCTTCTCCATGTCCATCAGCATCCGG +
Preference number: 6 (lower is better)
Translates to: IIWLLAFTEPPK*TCTFSMSISIR
Trigger: CCGGATGCTGATGGACATGGAGAAGGTGCAGGTCCACTTCGGAGGCTCTGTGAAGGCCAGCAGCCAGATGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp ACCAGGTGTTACCAAACCCCGCTGATCCATATGTTGTaGGGGCAGTCCTTGCTGGCCTGTGCCTGGTATCGG +
Preference number: 6 (lower is better)
Translates to: TRCYQTPLIHML*GQSLLACAWYR
Trigger: CCGATACCAGGCACAGGCCAGCAAGGACTGCCCCCACAACATATGGATCAGCGGGGTTTGGTAACACCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp TGCACCTGGTTGGACCATGCCAGGCAGAACTCCACGTaGTTGTGCCAGGCCAGGCAGAATTCCATGTGGTTG +
Preference number: 6 (lower is better)
Translates to: CTWLDHARQNST*LCQARQNSMWL
Trigger: CAACCACATGGAATTCTGCCTGGCCTGGCACAACCACGTGGAGTTCTGCCTGGCATGGTCCAACCAGGTGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp GGAGCACACTCGTGGGCTTGGTCAGGCTGGGAGTCCTaGAGGGCTTTAGTTGTACCATCTCGGTGGGCATCT +
Preference number: 6 (lower is better)
Translates to: GAHSWAWSGWES*RALVVPSRWAS
Trigger: AGATGCCCACCGAGATGGTACAACTAAAGCCCTCAAGGACTCCCAGCCTGACCAAGCCCACGAGTGTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp ACCTGGTTGGACCATGCCAGGCAGAACTCCACGTGGTaGTGCCAGGCCAGGCAGAATTCCATGTGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: TWLDHARQNSTW*CQARQNSMWLC
Trigger: GCACAACCACATGGAATTCTGCCTGGCCTGGCACAACCACGTGGAGTTCTGCCTGGCATGGTCCAACCAGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp ACGTTGGTCTGTACCAGGTGTTACCAAACCCCGCTGATCCATATGTaGTGGGGGCAGTCCTTGCTGGCCTGTGCCTGGTATCGGCAATCC +
Preference number: 6 (lower is better)
Translates to: TLVCTRCYQTPLIHM*WGQSLLACAWYRQS
Trigger: GGATTGCCGATACCAGGCACAGGCCAGCAAGGACTGCCCCCACAACATATGGATCAGCGGGGTTTGGTAACACCTGGTACAGACCAACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp GCTACCCTGCAGACTGGCTATGTCTGTAGGGATGGATaGATGGCTCACATTCGACTGCAGGAGACGCCCCTC +
Preference number: 6 (lower is better)
Translates to: ATLQTGYVCRDG*MAHIRLQETPL
Trigger: GAGGGGCGTCTCCTGCAGTCGAATGTGAGCCATTCATCCATCCCTACAGACATAGCCAGTCTGCAGGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS TCA 72 bp GCACGTTGGTCTGTACCAGGTGTTACCAAACCCCGCTaGTCCATATGTTGTGGGGGCAGTCCTTGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: ARWSVPGVTKPR*SICCGGSPCWP
Trigger: AGGCCAGCAAGGACTGCCCCCACAACATATGGATCAGCGGGGTTTGGTAACACCTGGTACAGACCAACGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp CCCTGCCGGGCCATGCCAGATTGTACCAAACCCTGCTaGGCCATTCCACCTTGGGCTAAACCACTCTCATCT +
Preference number: 6 (lower is better)
Translates to: PCRAMPDCTKPC*AIPPWAKPLSS
Trigger: AGATGAGAGTGGTTTAGCCCAAGGTGGAATGGCTCAGCAGGGTTTGGTACAATCTGGCATGGCCCGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp TTCTCCATGTCCATCAGCATCCGGGAGTGCATGCTGTaGAGACGCCCCACGCTTCTCTCCATCTGTGACATG +
Preference number: 6 (lower is better)
Translates to: FSMSISIRECML*RRPTLLSICDM
Trigger: CATGTCACAGATGGAGAGAAGCGTGGGGCGTCTGCACAGCATGCACTCCCGGATGCTGATGGACATGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp GATATGCACCAGGCTGTACCCCGCCACTCTGATCTGTaGTTGGTTGAACCCAAACAGGCTGCCCTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: DMHQAVPRHSDL*LVEPKQAALCL
Trigger: CAGACACAGGGCAGCCTGTTTGGGTTCAACCAAGCACAGATCAGAGTGGCGGGGTACAGCCTGGTGCATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp TGGTTGGACCATGCCAGGCAGAACTCCACGTGGTTGTaGCAGGCCAGGCAGAATTCCATGTGGTTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: WLDHARQNSTWL*QARQNSMWLCH
Trigger: ATGGCACAACCACATGGAATTCTGCCTGGCCTGGCACAACCACGTGGAGTTCTGCCTGGCATGGTCCAACCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp GATCTGTCCCAGGCTGCAACAAACCAGGCTGATCCATaGCAGGCTGCAGTAAGCCACGCCTTTCTTCCCCTA +
Preference number: 6 (lower is better)
Translates to: DLSQAATNQADP*QAAVSHAFLPL
Trigger: TAGGGGAAGAAAGGCGTGGCTTACTGCAGCCTGGCATGGATCAGCCTGGTTTGTTGCAGCCTGGGACAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp TTGCTCGTGGTAATGTTGAGCTTCTCACAGTCACCCTaGACTTGTAGGATGGCGCTCTGCACGTGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: LLVVMLSFSQSP*TCRMALCTWPS
Trigger: GCTGGGCCACGTGCAGAGCGCCATCCTACAAGTCCAGGGTGACTGTGAGAAGCTCAACATTACCACGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp CGTCGAGGCCCAGGATGTCAACCTCATCATGCTTCATaGCGATCTGGATCTCCTCCAGTGGAGACAGGTGCT +
Preference number: 6 (lower is better)
Translates to: RRGPGCQPHHAS*RSGSPPVETGA
Trigger: AGCACCTGTCTCCACTGGAGGAGATCCAGATCGCCATGAAGCATGATGAGGTTGACATCCTGGGCCTCGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp TGCACCAGGCTGTACCCCGCCACTCTGATCTGTGCTTaGTTGAACCCAAACAGGCTGCCCTGTGTCTGTTTG +
Preference number: 6 (lower is better)
Translates to: CTRLYPATLICA*LNPNRLPCVCL
Trigger: CAAACAGACACAGGGCAGCCTGTTTGGGTTCAACCAAGCACAGATCAGAGTGGCGGGGTACAGCCTGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp TGCTGCAGCTGCTGCAGTTGTTGGAGCTGCTGGAGCTTAGCCTTGTaGTGTTTTGTCACTCCTGGGGCATCTTTCCCTAGGATGCCTGGC +
Preference number: 6 (lower is better)
Translates to: CCSCCSCWSCWSLAL*CFVTPGASFPRMPG
Trigger: GCCAGGCATCCTAGGGAAAGATGCCCCAGGAGTGACAAAACACAACAAGGCTAAGCTCCAGCAGCTCCAACAACTGCAGCAGCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp CTGTCCATCTCTGCCAGGAGCTTATCCAGAAGTTTCTaGCAGTCTTGCTCCTGTCCGCTCATCTTGGCCACC +
Preference number: 6 (lower is better)
Translates to: LSISARSLSRSF*QSCSCPLILAT
Trigger: GGTGGCCAAGATGAGCGGACAGGAGCAAGACTGGCAGAAACTTCTGGATAAGCTCCTGGCAGAGATGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp TCTGCTTCAACGGATCCAGCTCCAGGCGGTCCAGCTTaGTGTCCATCTCTGCCAGGAGCTTATCCAGAAGTT +
Preference number: 6 (lower is better)
Translates to: SASTDPAPGGPA*CPSLPGAYPEV
Trigger: AACTTCTGGATAAGCTCCTGGCAGAGATGGACAGCAAGCTGGACCGCCTGGAGCTGGATCCGTTGAAGCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp TTGATCTACACTAGGCTGTACCCAACCGGGCAGATATaGACCAGGCTGTACCCCGCCACTCTGATCTGTGCT +
Preference number: 6 (lower is better)
Translates to: LIYTRLYPTGQI*TRLYPATLICA
Trigger: AGCACAGATCAGAGTGGCGGGGTACAGCCTGGTGCATATCTGCCCGGTTGGGTACAGCCTAGTGTAGATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp TGGAGCTGCTGCAGCTGCTGCAGTTGTTGGAGCTGCTaGAGCTTAGCCTTGTTGTGTTTTGTCACTCCTGGG +
Preference number: 6 (lower is better)
Translates to: WSCCSCCSCWSC*SLALLCFVTPG
Trigger: CCCAGGAGTGACAAAACACAACAAGGCTAAGCTCCAGCAGCTCCAACAACTGCAGCAGCTGCAGCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp TGTACCAGGTGTTACCAAACCCCGCTGATCCATATGTaGTGGGGGCAGTCCTTGCTGGCCTGTGCCTGGTAT +
Preference number: 6 (lower is better)
Translates to: CTRCYQTPLIHM*WGQSLLACAWY
Trigger: ATACCAGGCACAGGCCAGCAAGGACTGCCCCCACAACATATGGATCAGCGGGGTTTGGTAACACCTGGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp GCTGTCCATCTCTGCCAGGAGCTTATCCAGAAGTTTCTGCCAGTCTaGCTCCTGTCCGCTCATCTTGGCCACCAGTTCCTGCATCATGTG +
Preference number: 6 (lower is better)
Translates to: AVHLCQELIQKFLPV*LLSAHLGHQFLHHV
Trigger: CACATGATGCAGGAACTGGTGGCCAAGATGAGCGGACAGGAGCAAGACTGGCAGAAACTTCTGGATAAGCTCCTGGCAGAGATGGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 90 bp ACGGTGCCCTGGCATGCTCGAAATTATGGGGGTCACAGAGATGACTaGTCCAGTCACAGTTGTCTCCAAGGGACGGTCACAGGACAAGCA +
Preference number: 6 (lower is better)
Translates to: TVPWHARNYGGHRDD*SSHSCLQGTVTGQA
Trigger: TGCTTGTCCTGTGACCGTCCCTTGGAGACAACTGTGACTGGACAAGTCATCTCTGTGACCCCCATAATTTCGAGCATGCCAGGGCACCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 90 bp AGCTGCTGCAGCTGCTGCAGTTGTTGGAGCTGCTGGAGCTTAGCCTaGTTGTGTTTTGTCACTCCTGGGGCATCTTTCCCTAGGATGCCT +
Preference number: 6 (lower is better)
Translates to: SCCSCCSCWSCWSLA*LCFVTPGASFPRMP
Trigger: AGGCATCCTAGGGAAAGATGCCCCAGGAGTGACAAAACACAACAAGGCTAAGCTCCAGCAGCTCCAACAACTGCAGCAGCTGCAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 90 bp AATTTGTGCTTGCCAACGGTTGCTGTGGACGAATCCGAGCTCCCTTaGGAGGCCCTCCAGCCGTCACCAATCACTTGTTCTAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: NLCLPTVAVDESELP*EALQPSPITCSSSS
Trigger: GGAAGAGCTAGAACAAGTGATTGGTGACGGCTGGAGGGCCTCCAAAGGGAGCTCGGATTCGTCCACAGCAACCGTTGGCAAGCACAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp GCCCTGGCATGCTCGAAATTATGGGGGTCACAGAGATaGCTTGTCCAGTCACAGTTGTCTCCAAGGGACGGT +
Preference number: 6 (lower is better)
Translates to: ALACSKLWGSQR*LVQSQLSPRDG
Trigger: ACCGTCCCTTGGAGACAACTGTGACTGGACAAGTCATCTCTGTGACCCCCATAATTTCGAGCATGCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS TCA 72 bp TACCACCAGTGGAATCCAGAGCCTGGTCAGCAGCTCTaGGAAACATTCCACTCGGAAGGAGGTCACTTGAGG +
Preference number: 6 (lower is better)
Translates to: YHQWNPEPGQQL*ETFHSEGGHLR
Trigger: CCTCAAGTGACCTCCTTCCGAGTGGAATGTTTCTCAGAGCTGCTGACCAGGCTCTGGATTCCACTGGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp AGGTTGAGGCTCTTGAGAATGGACACTATCAGTGTGTaGAAGGCCGTAAAGTTCACCGCGCCCACCTCTGGA +
Preference number: 6 (lower is better)
Translates to: RLRLLRMDTISV*KAVKFTAPTSG
Trigger: TCCAGAGGTGGGCGCGGTGAACTTTACGGCCTTGCACACACTGATAGTGTCCATTCTCAAGAGCCTCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp TATAGGCTGTGCCAAGCCAAACTTGTCCTCACTAGGTaGTCCAGGTTGTGCCAAGTCAGGTTGTGCCACACC +
Preference number: 6 (lower is better)
Translates to: YRLCQAKLVLTR*SRLCQVRLCHT
Trigger: GGTGTGGCACAACCTGACTTGGCACAACCTGGAGCACCTAGTGAGGACAAGTTTGGCTTGGCACAGCCTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp AGAAGTTTCTGCCAGTCTTGCTCCTGTCCGCTCATCTaGGCCACCAGTTCCTGCATCATGTGGTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: RSFCQSCSCPLI*ATSSCIMWFSC
Trigger: GCAGCTGAACCACATGATGCAGGAACTGGTGGCCAAGATGAGCGGACAGGAGCAAGACTGGCAGAAACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp CCACTCGGAAGGAGGTCACTTGAGGTAAATTTGTGCTaGCCAACGGTTGCTGTGGACGAATCCGAGCTCCCT +
Preference number: 6 (lower is better)
Translates to: PLGRRSLEVNLC*PTVAVDESELP
Trigger: AGGGAGCTCGGATTCGTCCACAGCAACCGTTGGCAAGCACAAATTTACCTCAAGTGACCTCCTTCCGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp CATGCCAAATGGTTCCGTCCTGGGTATCCCACCACGTaGAGTCTGACCAGGGAGTTGCTCATCTCTTCTTGC +
Preference number: 6 (lower is better)
Translates to: HAKWFRPGYPTT*SLTRELLISSC
Trigger: GCAAGAAGAGATGAGCAACTCCCTGGTCAGACTCAACGTGGTGGGATACCCAGGACGGAACCATTTGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp TTCTGCTTCTGCCGATGGTCCTCAATGAGGTTGCTCGTGGTAATGTaGAGCTTCTCACAGTCACCCTGGACTTGTAGGATGGCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: FCFCRWSSMRLLVVM*SFSQSPWTCRMALC
Trigger: GCAGAGCGCCATCCTACAAGTCCAGGGTGACTGTGAGAAGCTCAACATTACCACGAGCAACCTCATTGAGGACCATCGGCAGAAGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS TCA 72 bp CCCCTCAGAGGAGACTGGTCTGTCTTTCTTTTGCCCTaGAGGAACTGCTTTGCTGTCCGCTATCATCTGTGC +
Preference number: 6 (lower is better)
Translates to: PLRGDWSVFLLP*RNCFAVRYHLC
Trigger: GCACAGATGATAGCGGACAGCAAAGCAGTTCCTTCAGGGCAAAAGAAAGACAGACCAGTCTCCTCTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp ATCTTGGCCACCAGTTCCTGCATCATGTGGTTCAGCTaGTCTGTAGTGGCATCAAACTGGATCCGGCTCACT +
Preference number: 6 (lower is better)
Translates to: ILATSSCIMWFS*SVVASNWIRLT
Trigger: AGTGAGCCGGATCCAGTTTGATGCCACTACAGAGCAGCTGAACCACATGATGCAGGAACTGGTGGCCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp TGTGTTTTGTCACTCCTGGGGCATCTTTCCCTAGGATaGCTGGCAACCGTGTATCCATCCGTCCCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: CVLSLLGHLSLG*LATVYPSVPCR
Trigger: TCTACAAGGGACGGATGGATACACGGTTGCCAGGCATCCTAGGGAAAGATGCCCCAGGAGTGACAAAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp CTGGTCTGTCTTTCTTTTGCCCTGAAGGAACTGCTTTaGTGTCCGCTATCATCTGTGCACTCTGAGGCCGAG +
Preference number: 6 (lower is better)
Translates to: LVCLSFALKELL*CPLSSVHSEAE
Trigger: CTCGGCCTCAGAGTGCACAGATGATAGCGGACAGCAAAGCAGTTCCTTCAGGGCAAAAGAAAGACAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp AGACGCCCCTCAGAGGAGACTGGTCTGTCTTTCTTTTaGCCTGAAGGAACTGCTTTGCTGTCCGCTATCATC +
Preference number: 6 (lower is better)
Translates to: RRPSEETGLSFF*PEGTALLSAII
Trigger: GATGATAGCGGACAGCAAAGCAGTTCCTTCAGGGCAAAAGAAAGACAGACCAGTCTCCTCTGAGGGGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp ATCATGTGGTTCAGCTGCTCTGTAGTGGCATCAAACTaGATCCGGCTCACTTTGGATGCCAGAGCGCTCTTG +
Preference number: 6 (lower is better)
Translates to: IMWFSCSVVASN*IRLTLDARALL
Trigger: CAAGAGCGCTCTGGCATCCAAAGTGAGCCGGATCCAGTTTGATGCCACTACAGAGCAGCTGAACCACATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CCA 72 bp CACAGCGTCTATCAATCTAGGCTGATCCATGCCAAATaGTTCCGTCCTGGGTATCCCACCACGTTGAGTCTG +
Preference number: 6 (lower is better)
Translates to: HSVYQSRLIHAK*FRPGYPTTLSL
Trigger: CAGACTCAACGTGGTGGGATACCCAGGACGGAACCATTTGGCATGGATCAGCCTAGATTGATAGACGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp TCCACGTGGTTGTGCCAGGCCAGGCAGAATTCCATGTaGTTGTGCCATATCAAGCTGATCTACATCAGGCTG +
Preference number: 6 (lower is better)
Translates to: STWLCQARQNSM*LCHIKLIYIRL
Trigger: CAGCCTGATGTAGATCAGCTTGATATGGCACAACCACATGGAATTCTGCCTGGCCTGGCACAACCACGTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp AGCTCCCAAGAGACCTGGGTATCCACCTCAACTCTCTaGACTTCTTCAGGCAGGCCAGCCTCTTCTATATCA +
Preference number: 6 (lower is better)
Translates to: SSQETWVSTSTL*TSSGRPASSIS
Trigger: TGATATAGAAGAGGCTGGCCTGCCTGAAGAAGTCCAGAGAGTTGAGGTGGATACCCAGGTCTCTTGGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp TGCTCTGTAGTGGCATCAAACTGGATCCGGCTCACTTaGGATGCCAGAGCGCTCTTGTCGGCTTTCTCATCA +
Preference number: 6 (lower is better)
Translates to: CSVVASNWIRLT*DARALLSAFSS
Trigger: TGATGAGAAAGCCGACAAGAGCGCTCTGGCATCCAAAGTGAGCCGGATCCAGTTTGATGCCACTACAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp AGCTGCTGCAGTTGTTGGAGCTGCTGGAGCTTAGCCTaGTTGTGTTTTGTCACTCCTGGGGCATCTTTCCCT +
Preference number: 6 (lower is better)
Translates to: SCCSCWSCWSLA*LCFVTPGASFP
Trigger: AGGGAAAGATGCCCCAGGAGTGACAAAACACAACAAGGCTAAGCTCCAGCAGCTCCAACAACTGCAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp CAAGCTAGGCTGATCTACACCAGGAGGCACCAAATGTaGGTCTGTGCCAGGCTGTATCAAACCACCCGAAAC +
Preference number: 6 (lower is better)
Translates to: QARLIYTRRHQM*VCARLYQTTRN
Trigger: GTTTCGGGTGGTTTGATACAGCCTGGCACAGACCAACATTTGGTGCCTCCTGGTGTAGATCAGCCTAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp ACGTGGTTGTGCCAGGCCAGGCAGAATTCCATGTGGTaGTGCCATATCAAGCTGATCTACATCAGGCTGCAC +
Preference number: 6 (lower is better)
Translates to: TWLCQARQNSMW*CHIKLIYIRLH
Trigger: GTGCAGCCTGATGTAGATCAGCTTGATATGGCACAACCACATGGAATTCTGCCTGGCCTGGCACAACCACGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp TGGTTCAGCTGCTCTGTAGTGGCATCAAACTGGATCCGGCTCACTTaGGATGCCAGAGCGCTCTTGTCGGCTTTCTCATCAATCTCCATC +
Preference number: 6 (lower is better)
Translates to: WFSCSVVASNWIRLT*DARALLSAFSSISI
Trigger: GATGGAGATTGATGAGAAAGCCGACAAGAGCGCTCTGGCATCCAAAGTGAGCCGGATCCAGTTTGATGCCACTACAGAGCAGCTGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 90 bp AGCTTATCCAGAAGTTTCTGCCAGTCTTGCTCCTGTCCGCTCATCTaGGCCACCAGTTCCTGCATCATGTGGTTCAGCTGCTCTGTAGTG +
Preference number: 6 (lower is better)
Translates to: SLSRSFCQSCSCPLI*ATSSCIMWFSCSVV
Trigger: CACTACAGAGCAGCTGAACCACATGATGCAGGAACTGGTGGCCAAGATGAGCGGACAGGAGCAAGACTGGCAGAAACTTCTGGATAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 90 bp AGAAACATTCCACTCGGAAGGAGGTCACTTGAGGTAAATTTGTGCTaGCCAACGGTTGCTGTGGACGAATCCGAGCTCCCTTTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: RNIPLGRRSLEVNLC*PTVAVDESELPLEA
Trigger: GGCCTCCAAAGGGAGCTCGGATTCGTCCACAGCAACCGTTGGCAAGCACAAATTTACCTCAAGTGACCTCCTTCCGAGTGGAATGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp AGGCTGATCCATGCCAAATGGTTCCGTCCTGGGTATCCCACCACGTaGAGTCTGACCAGGGAGTTGCTCATCTCTTCTTGCATATGTCTG +
Preference number: 6 (lower is better)
Translates to: RLIHAKWFRPGYPTT*SLTRELLISSCICL
Trigger: CAGACATATGCAAGAAGAGATGAGCAACTCCCTGGTCAGACTCAACGTGGTGGGATACCCAGGACGGAACCATTTGGCATGGATCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp CCAGACCAAGCTGATCCATTCCAGGTTGAAGCAAACCATCCTGACTaGCACCAACTTGCATCAACCCAGGTGCATATGCACCTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: PDQADPFQVEANHPD*HQLASTQVHMHLAA
Trigger: TGCAGCCAGGTGCATATGCACCTGGGTTGATGCAAGTTGGTGCAAGTCAGGATGGTTTGCTTCAACCTGGAATGGATCAGCTTGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp GCTCTGAGAAACATTCCACTCGGAAGGAGGTCACTTGAGGTAAATTaGTGCTTGCCAACGGTTGCTGTGGACGAATCCGAGCTCCCTTTG +
Preference number: 6 (lower is better)
Translates to: ALRNIPLGRRSLEVN*CLPTVAVDESELPL
Trigger: CAAAGGGAGCTCGGATTCGTCCACAGCAACCGTTGGCAAGCACAAATTTACCTCAAGTGACCTCCTTCCGAGTGGAATGTTTCTCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp AGGTTGAATCAAGCTAGGCTGATCTACACCAGGAGGCACCAAATGTaGGTCTGTGCCAGGCTGTATCAAACCACCCGAAACTGTGCTAGG +
Preference number: 6 (lower is better)
Translates to: RLNQARLIYTRRHQM*VCARLYQTTRNCAR
Trigger: CCTAGCACAGTTTCGGGTGGTTTGATACAGCCTGGCACAGACCAACATTTGGTGCCTCCTGGTGTAGATCAGCCTAGCTTGATTCAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp GCTCAGAAGCCTGCTTCAGAATTTTCACATCTTCTATaGGGTCTTGGAGCACACTCGTGGGCTTGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: AQKPASEFSHLL*GLGAHSWAWSG
Trigger: GCCTGACCAAGCCCACGAGTGTGCTCCAAGACCTCATAGAAGATGTGAAAATTCTGAAGCAGGCTTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp TGTAGTGGCATCAAACTGGATCCGGCTCACTTTGGATaGCAGAGCGCTCTTGTCGGCTTTCTCATCAATCTC +
Preference number: 6 (lower is better)
Translates to: CSGIKLDPAHFG*QSALVGFLINL
Trigger: GAGATTGATGAGAAAGCCGACAAGAGCGCTCTGGCATCCAAAGTGAGCCGGATCCAGTTTGATGCCACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS GCA 72 bp ATTCCACTCGGAAGGAGGTCACTTGAGGTAAATTTGTaGTTGCCAACGGTTGCTGTGGACGAATCCGAGCTC +
Preference number: 6 (lower is better)
Translates to: IPLGRRSLEVNL*LPTVAVDESEL
Trigger: GAGCTCGGATTCGTCCACAGCAACCGTTGGCAAGCACAAATTTACCTCAAGTGACCTCCTTCCGAGTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp ACCTGTTGGGTCACCAGAGCTATCTCCTCTTCCTGCTaGAGTTCAGGGACTGAGATCTGGTCTATTTGTGTG +
Preference number: 6 (lower is better)
Translates to: TCWVTRAISSSC*SSGTEIWSICV
Trigger: CACACAAATAGACCAGATCTCAGTCCCTGAACTCCAGCAGGAAGAGGAGATAGCTCTGGTGACCCAACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp TGCCGATGGTCCTCAATGAGGTTGCTCGTGGTAATGTaGAGCTTCTCACAGTCACCCTGGACTTGTAGGATG +
Preference number: 6 (lower is better)
Translates to: CRWSSMRLLVVM*SFSQSPWTCRM
Trigger: CATCCTACAAGTCCAGGGTGACTGTGAGAAGCTCAACATTACCACGAGCAACCTCATTGAGGACCATCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp TGGCATGCTCGAAATTATGGGGGTCACAGAGATGACTaGTCCAGTCACAGTTGTCTCCAAGGGACGGTCACA +
Preference number: 6 (lower is better)
Translates to: WHARNYGGHRDD*SSHSCLQGTVT
Trigger: TGTGACCGTCCCTTGGAGACAACTGTGACTGGACAAGTCATCTCTGTGACCCCCATAATTTCGAGCATGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp AGCCTGCTTCAGAATTTTCACATCTTCTATGAGGTCTaGGAGCACACTCGTGGGCTTGGTCAGGCTGGGAGT +
Preference number: 6 (lower is better)
Translates to: SLLQNFHIFYEV*EHTRGLGQAGS
Trigger: ACTCCCAGCCTGACCAAGCCCACGAGTGTGCTCCAAGACCTCATAGAAGATGTGAAAATTCTGAAGCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp TCCAGGTTGTATCCACTCAACTTGACCTACTCCAGGTaGCATCAAAGCGCGCTGACTGTCACTAGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: SRLYPLNLTYSR*HQSALTVTRLE
Trigger: CTCCAACCTAGTGACAGTCAGCGCGCTTTGATGCAACCTGGAGTAGGTCAAGTTGAGTGGATACAACCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp GTCCACAAAACCATACTGGTACATTCTAGGCTGTACCAAGCCACGTaGGTCCATGCCAGGCTGCATAAAAGCACTCTGGTCCACTATAGG +
Preference number: 6 (lower is better)
Translates to: VHKTILVHSRLYQAT*VHARLHKSTLVHYR
Trigger: CCTATAGTGGACCAGAGTGCTTTTATGCAGCCTGGCATGGACCAACGTGGCTTGGTACAGCCTAGAATGTACCAGTATGGTTTTGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp CCAGGCAGAATTCCATGTGGTTGTGCCATATCAAGCTaGTCTACATCAGGCTGCACCAAACTCCAGGCTGTA +
Preference number: 6 (lower is better)
Translates to: PGRIPCGCAISS*STSGCTKLQAV
Trigger: TACAGCCTGGAGTTTGGTGCAGCCTGATGTAGATCAGCTTGATATGGCACAACCACATGGAATTCTGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp GATACCTGTTGGGTCACCAGAGCTATCTCCTCTTCCTaGTGGAGTTCAGGGACTGAGATCTGGTCTATTTGT +
Preference number: 6 (lower is better)
Translates to: DTCWVTRAISSS*WSSGTEIWSIC
Trigger: ACAAATAGACCAGATCTCAGTCCCTGAACTCCAGCAGGAAGAGGAGATAGCTCTGGTGACCCAACAGGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp TATGACCTGGGATGGCTCACGGGCCATATCCCGAAATaGAGTAGTAGATCTGCTTTGATCTCTGCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: YDLGWLTGHIPK*SSRSALISAGD
Trigger: ATCTCCAGCAGAGATCAAAGCAGATCTACTACTGCATTTCGGGATATGGCCCGTGAGCCATCCCAGGTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp ACGTTGAGTCTGACCAGGGAGTTGCTCATCTCTTCTTaGATATGTCTGGCGATCTGTCTCGGATATGACCTG +
Preference number: 6 (lower is better)
Translates to: TLSLTRELLISS*ICLAICLGYDL
Trigger: CAGGTCATATCCGAGACAGATCGCCAGACATATGCAAGAAGAGATGAGCAACTCCCTGGTCAGACTCAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp CGAACTTCCTTGTTCAACGTCTTTAGGCTCTTCAGCTaGTCTGCCAGGTCCTGGGGTATGGTCTTTTTGACT +
Preference number: 6 (lower is better)
Translates to: RTSLFNVFRLFS*SARSWGMVFLT
Trigger: AGTCAAAAAGACCATACCCCAGGACCTGGCAGAGCAGCTGAAGAGCCTAAAGACGTTGAACAAGGAAGTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp ATCTCCTCTTCCTGCTGGAGTTCAGGGACTGAGATCTaGTCTATTTGTGTGGCCATGCCCTGTACTTTGTTG +
Preference number: 6 (lower is better)
Translates to: ISSSCWSSGTEI*SICVAMPCTLL
Trigger: CAACAAAGTACAGGGCATGGCCACACAAATAGACCAGATCTCAGTCCCTGAACTCCAGCAGGAAGAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp ATGTCTTTCTGCTTCTGCCGATGGTCCTCAATGAGGTaGCTCGTGGTAATGTTGAGCTTCTCACAGTCACCC +
Preference number: 6 (lower is better)
Translates to: MSFCFCRWSSMR*LVVMLSFSQSP
Trigger: GGGTGACTGTGAGAAGCTCAACATTACCACGAGCAACCTCATTGAGGACCATCGGCAGAAGCAGAAAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 72 bp AACATTCCACTCGGAAGGAGGTCACTTGAGGTAAATTaGTGCTTGCCAACGGTTGCTGTGGACGAATCCGAG +
Preference number: 6 (lower is better)
Translates to: NIPLGRRSLEVN*CLPTVAVDESE
Trigger: CTCGGATTCGTCCACAGCAACCGTTGGCAAGCACAAATTTACCTCAAGTGACCTCCTTCCGAGTGGAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp GCTGATCCATTCCAGGTTGAAGCAAACCATCCTGACTaGCACCAACTTGCATCAACCCAGGTGCATATGCAC +
Preference number: 6 (lower is better)
Translates to: ADPFQVEANHPD*HQLASTQVHMH
Trigger: GTGCATATGCACCTGGGTTGATGCAAGTTGGTGCAAGTCAGGATGGTTTGCTTCAACCTGGAATGGATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp ATCACGACGACTCATTCCAGGTTGTATCCACTCAACTaGACCTACTCCAGGTTGCATCAAAGCGCGCTGACT +
Preference number: 6 (lower is better)
Translates to: ITTTHSRLYPLN*TYSRLHQSALT
Trigger: AGTCAGCGCGCTTTGATGCAACCTGGAGTAGGTCAAGTTGAGTGGATACAACCTGGAATGAGTCGTCGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp AGCACTTCAATGTCTTTCTGCTTCTGCCGATGGTCCTCAATGAGGTaGCTCGTGGTAATGTTGAGCTTCTCACAGTCACCCTGGACTTGT +
Preference number: 6 (lower is better)
Translates to: STSMSFCFCRWSSMR*LVVMLSFSQSPWTC
Trigger: ACAAGTCCAGGGTGACTGTGAGAAGCTCAACATTACCACGAGCAACCTCATTGAGGACCATCGGCAGAAGCAGAAAGACATTGAAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093909.12
ENSMUST00000208602.2
CDS CAA 90 bp GGATGGCTCACGGGCCATATCCCGAAATGCAGTAGTAGATCTGCTTaGATCTCTGCTGGAGATTCTTTCTATACCACCAGTGGAATCCAG +
Preference number: 6 (lower is better)
Translates to: GWLTGHIPKCSSRSA*ISAGDSFYTTSGIQ
Trigger: CTGGATTCCACTGGTGGTATAGAAAGAATCTCCAGCAGAGATCAAAGCAGATCTACTACTGCATTTCGGGATATGGCCCGTGAGCCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp AACTTCTGTATCTTCTCTAGTTTTGCCTTGTCCTGCCGAACTTCCTaGTTCAACGTCTTTAGGCTCTTCAGCTGCTCTGCCAGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: NFCIFSSFALSCRTS*FNVFRLFSCSARSW
Trigger: CCAGGACCTGGCAGAGCAGCTGAAGAGCCTAAAGACGTTGAACAAGGAAGTTCGGCAGGACAAGGCAAAACTAGAGAAGATACAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp GCTTGGTGTTACAAAGTCTGGCTGAGTTGGAGTGGGTaGTCTGAAACCACGTGGAAGTGTAGCAGGTTGAAA +
Preference number: 6 (lower is better)
Translates to: AWCYKVWLSWSG*SETTWKCSRLK
Trigger: TTTCAACCTGCTACACTTCCACGTGGTTTCAGACAACCCACTCCAACTCAGCCAGACTTTGTAACACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp ATCTTCTCTAGTTTTGCCTTGTCCTGCCGAACTTCCTaGTTCAACGTCTTTAGGCTCTTCAGCTGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: IFSSFALSCRTS*FNVFRLFSCSA
Trigger: GGCAGAGCAGCTGAAGAGCCTAAAGACGTTGAACAAGGAAGTTCGGCAGGACAAGGCAAAACTAGAGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp TGTGTGGCCATGCCCTGTACTTTGTTGTCCATAGTTTTAAACTGTTaGGTGAGGTCCAGTACCTGGTTACCCAAGTCCTTCACCTGGTTT +
Preference number: 6 (lower is better)
Translates to: CVAMPCTLLSIVLNC*VRSSTWLPKSFTWF
Trigger: AAACCAGGTGAAGGACTTGGGTAACCAGGTACTGGACCTCACCAAACAGTTTAAAACTATGGACAACAAAGTACAGGGCATGGCCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp AAGGTCTATGCTTGGTGTTACAAAGTCTGGCTGAGTTGGAGTGGGTaGTCTGAAACCACGTGGAAGTGTAGCAGGTTGAAATATACCACG +
Preference number: 6 (lower is better)
Translates to: KVYAWCYKVWLSWSG*SETTWKCSRLKYTT
Trigger: CGTGGTATATTTCAACCTGCTACACTTCCACGTGGTTTCAGACAACCCACTCCAACTCAGCCAGACTTTGTAACACCAAGCATAGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp TCAGCAGCACTGTCCACAAACTTCTGTATCTTCTCTAGTTTTGCCTaGTCCTGCCGAACTTCCTTGTTCAACGTCTTTAGGCTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SAALSTNFCIFSSFA*SCRTSLFNVFRLFS
Trigger: GCTGAAGAGCCTAAAGACGTTGAACAAGGAAGTTCGGCAGGACAAGGCAAAACTAGAGAAGATACAGAAGTTTGTGGACAGTGCTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp TGGTGTCAGCAGCACTGTCCACAAACTTCTGTATCTTCTCTAGTTTaGCCTTGTCCTGCCGAACTTCCTTGTTCAACGTCTTTAGGCTCT +
Preference number: 6 (lower is better)
Translates to: WCQQHCPQTSVSSLV*PCPAELPCSTSLGS
Trigger: AGAGCCTAAAGACGTTGAACAAGGAAGTTCGGCAGGACAAGGCAAAACTAGAGAAGATACAGAAGTTTGTGGACAGTGCTGCTGACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp TACACCGGGCTGCACAAAACCATATCGATCAACTCTTaGCTGAACCAAACCATACTGACCTATACCAGGTTG +
Preference number: 6 (lower is better)
Translates to: YTGLHKTISINS*LNQTILTYTRL
Trigger: CAACCTGGTATAGGTCAGTATGGTTTGGTTCAGCCAAGAGTTGATCGATATGGTTTTGTGCAGCCCGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp GGTATGGTCTTTTTGACTATCATTGTGATCAGGTACTaGATTTTCTCGAAGTCAGTCTGGCCGGCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: GMVFLTIIVIRY*IFSKSVWPASS
Trigger: GGAACTGGCCGGCCAGACTGACTTCGAGAAAATCCAGTACCTGATCACAATGATAGTCAAAAAGACCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp TGGAAGTCGATAAGAACTTCTTGGAGGTTGAGGCTCTaGAGAATGGACACTATCAGTGTGTGCAAGGCCGTA +
Preference number: 6 (lower is better)
Translates to: WKSIRTSWRLRL*RMDTISVCKAV
Trigger: TACGGCCTTGCACACACTGATAGTGTCCATTCTCAAGAGCCTCAACCTCCAAGAAGTTCTTATCGACTTCCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 90 bp GGGACTGAGATCTGGTCTATTTGTGTGGCCATGCCCTGTACTTTGTaGTCCATAGTTTTAAACTGTTTGGTGAGGTCCAGTACCTGGTTA +
Preference number: 6 (lower is better)
Translates to: GTEIWSICVAMPCTL*SIVLNCLVRSSTWL
Trigger: TAACCAGGTACTGGACCTCACCAAACAGTTTAAAACTATGGACAACAAAGTACAGGGCATGGCCACACAAATAGACCAGATCTCAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp CAGGCTTCTCCATCATCTCCTCAGATTCATAGATCTTaGAGAACTTTGTTAGGGATACCTGTTGGGTCACCA +
Preference number: 6 (lower is better)
Translates to: QASPSSPQIHRS*RTLLGIPVGSP
Trigger: TGGTGACCCAACAGGTATCCCTAACAAAGTTCTCCAAGATCTATGAATCTGAGGAGATGATGGAGAAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp ACGGGCCATATCCCGAAATGCAGTAGTAGATCTGCTTaGATCTCTGCTGGAGATTCTTTCTATACCACCAGT +
Preference number: 6 (lower is better)
Translates to: TGHIPKCSSRSA*ISAGDSFYTTS
Trigger: ACTGGTGGTATAGAAAGAATCTCCAGCAGAGATCAAAGCAGATCTACTACTGCATTTCGGGATATGGCCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp CAGCACTGTCCACAAACTTCTGTATCTTCTCTAGTTTaGCCTTGTCCTGCCGAACTTCCTTGTTCAACGTCT +
Preference number: 6 (lower is better)
Translates to: QHCPQTSVSSLV*PCPAELPCSTS
Trigger: AGACGTTGAACAAGGAAGTTCGGCAGGACAAGGCAAAACTAGAGAAGATACAGAAGTTTGTGGACAGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp CGGCTTTTAACTAGTTTCTCCAGTTCATTAAAACGTTaGAGGAGTTCCTGCAGCTCAGAAGCCTGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: RLLTSFSSSLKR*RSSCSSEACFR
Trigger: TCTGAAGCAGGCTTCTGAGCTGCAGGAACTCCTTCAACGTTTTAATGAACTGGAGAAACTAGTTAAAAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp TCCATAGTTTTAAACTGTTTGGTGAGGTCCAGTACCTaGTTACCCAAGTCCTTCACCTGGTTTTCTAGCTCT +
Preference number: 6 (lower is better)
Translates to: SIVLNCLVRSST*LPKSFTWFSSS
Trigger: AGAGCTAGAAAACCAGGTGAAGGACTTGGGTAACCAGGTACTGGACCTCACCAAACAGTTTAAAACTATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CCA 72 bp CTTCTATATCATACTGAACTTCAACTGTCCTTGTCTTaGCTTTTTGACCTGAGATCCGATGGACCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: LLYHTELQLSLS*LFDLRSDGPLQ
Trigger: CTGAAGGGGTCCATCGGATCTCAGGTCAAAAAGCCAAGACAAGGACAGTTGAAGTTCAGTATGATATAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp ATGCCCTGTACTTTGTTGTCCATAGTTTTAAACTGTTaGGTGAGGTCCAGTACCTGGTTACCCAAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: MPCTLLSIVLNC*VRSSTWLPKSF
Trigger: GAAGGACTTGGGTAACCAGGTACTGGACCTCACCAAACAGTTTAAAACTATGGACAACAAAGTACAGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp GAGATCTGGTCTATTTGTGTGGCCATGCCCTGTACTTaGTTGTCCATAGTTTTAAACTGTTTGGTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: EIWSICVAMPCT*LSIVLNCLVRS
Trigger: GGACCTCACCAAACAGTTTAAAACTATGGACAACAAAGTACAGGGCATGGCCACACAAATAGACCAGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp CCATCATCTCCTCAGATTCATAGATCTTGGAGAACTTaGTTAGGGATACCTGTTGGGTCACCAGAGCTATCT +
Preference number: 6 (lower is better)
Translates to: PSSPQIHRSWRT*LGIPVGSPELS
Trigger: AGATAGCTCTGGTGACCCAACAGGTATCCCTAACAAAGTTCTCCAAGATCTATGAATCTGAGGAGATGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp AGTGGGTTGTCTGAAACCACGTGGAAGTGTAGCAGGTaGAAATATACCACGAGGAAATATACCAGGGTGAAT +
Preference number: 6 (lower is better)
Translates to: SGLSETTWKCSR*KYTTRKYTRVN
Trigger: ATTCACCCTGGTATATTTCCTCGTGGTATATTTCAACCTGCTACACTTCCACGTGGTTTCAGACAACCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS TCA 72 bp AAGCGTGACGTTAAGCTGGACTGTCTAAAACCTTGTTaGTCTGTACTAACTTGCATCAAACCAAGTGACACC +
Preference number: 6 (lower is better)
Translates to: KRDVKLDCLKPC*SVLTCIKPSDT
Trigger: GGTGTCACTTGGTTTGATGCAAGTTAGTACAGATCAACAAGGTTTTAGACAGTCCAGCTTAACGTCACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS GCA 72 bp ACAAACTTCTGTATCTTCTCTAGTTTTGCCTTGTCCTaGCGAACTTCCTTGTTCAACGTCTTTAGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: TNFCIFSSFALS*RTSLFNVFRLF
Trigger: GAAGAGCCTAAAGACGTTGAACAAGGAAGTTCGGCAGGACAAGGCAAAACTAGAGAAGATACAGAAGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2
CDS CAA 72 bp ATCTGGTCTATTTGTGTGGCCATGCCCTGTACTTTGTaGTCCATAGTTTTAAACTGTTTGGTGAGGTCCAGT +
Preference number: 6 (lower is better)
Translates to: IWSICVAMPCTL*SIVLNCLVRSS
Trigger: ACTGGACCTCACCAAACAGTTTAAAACTATGGACAACAAAGTACAGGGCATGGCCACACAAATAGACCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208602.2