Pregenerated sensors for QRFPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058400Ensembl transcript IDs: ENSMUST00000091227.9, ENSMUST00000197447.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAAAGAAGGCAAGCTGTCGCTTGAGTTGCCTTTTCTCCCCTGGCTaGTCACACAATTTGACATCAACGTTGGCATCGCTGAATAAGTCT | + |
|
Preference number: 1 (lower is better) Translates to: LKKASCRLSCLFSPG*SHNLTSTLASLNKS Trigger: AGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGAGCAGCCAGGGGAGAAAAGGCAACTCAAGCGACAGCTTGCCTTCTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR GCA 90 bp | ATACACAAAGGGATTACAGATGGAGTTGAAAAAGCCAATTGTTTGTaGAACAGCAAAAACCATCTTGATTGTGACATCATCATACTCTTT | + |
|
Preference number: 1 (lower is better) Translates to: IHKGITDGVEKANCL*NSKNHLDCDIIILF Trigger: AAAGAGTATGATGATGTCACAATCAAGATGGTTTTTGCTGTTGCACAAACAATTGGCTTTTTCAACTCCATCTGTAATCCCTTTGTGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR CAA 90 bp | AGTTGCCTTTTCTCCCCTGGCTGCTCACACAATTTGACATCAACGTaGGCATCGCTGAATAAGTCTCCTTTGGCTTCCGCCACTGGACGC | + |
|
Preference number: 2 (lower is better) Translates to: SCLFSPGCSHNLTST*ASLNKSPLASATGR Trigger: GCGTCCAGTGGCGGAAGCCAAAGGAGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGAGCAGCCAGGGGAGAAAAGGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR CAA 90 bp | AGCTGTCGCTTGAGTTGCCTTTTCTCCCCTGGCTGCTCACACAATTaGACATCAACGTTGGCATCGCTGAATAAGTCTCCTTTGGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SCRLSCLFSPGCSHN*TSTLASLNKSPLAS Trigger: GGAAGCCAAAGGAGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGAGCAGCCAGGGGAGAAAAGGCAACTCAAGCGACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCCCTGGCTGCTCACACAATTTGACATCAACGTTGGCATCGCTGAATAAGTCTTCCAGGCTTCTGTCCTaGGGAGAAGGTTTCTCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SPGCSHNLTSTLASLNKSSRLLS*GEGFSY Trigger: GTAAGAGAAACCTTCTCCCCAGGACAGAAGCCTGGA...AGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGAGCAGCCAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR CAA 90 bp | TCACACAATTTGACATCAACGTTGGCATCGCTGAATAAGTCTCCTTaGGCTTCCGCCACTGGACGCTGTGATCGTGATAACTTTGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SHNLTSTLASLNKSP*ASATGRCDRDNFAL Trigger: GAGAGCAAAGTTATCACGATCACAGCGTCCAGTGGCGGAAGCCAAAGGAGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR CAA 90 bp | AGTCTCCTTTGGCTTCCGCCACTGGACGCTGTGATCGTGATAACTTaGCTCTCTTTTGCATCATTGAAATCCCAGAATTTCCAGGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLLWLPPLDAVIVIT*LSFASLKSQNFQAS Trigger: AGAAGCCTGGAAATTCTGGGATTTCAATGATGCAAAAGAGAGCAAAGTTATCACGATCACAGCGTCCAGTGGCGGAAGCCAAAGGAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCTGGCTGCTCACACAATTTGACATCAACGTTGGCATCGCTGAATAAGTCTAAAGCCAATTGTTTGTaGAACAGCAAAAACCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: SPGCSHNLTSTLASLNKSKANCL*NSKNHL Trigger: AAGATGGTTTTTGCTGTTGCACAAACAATTGGCTTT...AGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGAGCAGCCAGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGCTGCTCACACAATTTGACATCAACGTTGGCATCGCTGAATAAGTCTCCTAACTTTGCTCTCTTTTaGATCATTGAAATCCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PGCSHNLTSTLASLNKSPNFALF*IIEIPE Trigger: TTCTGGGATTTCAATGATGCAAAAGAGAGCAAAGTT...AGGAGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGAGCAGCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTTTCAGAAAGTTCAGAACTAAAGAAGGCAAGCTGTCGCTTGAGTTGCCTTTGCTGCCAAAACCACTaGTTTATTATGTACGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: EFSESSELKKASCRLSCLCCQNH*FIMYED Trigger: GTCTTCGTACATAATAAAGCAGTGGTTTTGGCAGCA...AAGGCAACTCAAGCGACAGCTTGCCTTCTTTAGTTCTGAACTTTCTGAAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTATGCTGCCAAAACCACTaGTTTATTATGTACGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SVPKADFTNVYSTLQTTLCCQNH*FIMYED Trigger: GTCTTCGTACATAATAAAGCAGTGGTTTTGGCAGCA...TAATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATAGGTTTCTCTTACTATaGAATAACAAACCGCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: CQFQRLILQTFTAHYKLHRFLLL*NNKPQT Trigger: TGTCTGCGGTTTGTTATTGCATAGTAAGAGAAACCT...ATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR GCA 72 bp | AGTTCAGAACTAAAGAAGGCAAGCTGTCGCTTGAGTTaGCTTTTCTCCCCTGGCTGCTCACACAATTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: SSELKKASCRLS*LFSPGCSHNLT Trigger: TGTCAAATTGTGTGAGCAGCCAGGGGAGAAAAGGCAACTCAAGCGACAGCTTGCCTTCTTTAGTTCTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGCCGAAAGTAGAGTTTTCAGAAAGTTCAGAACTAAAGAAGGCAAGCTGTGAAAAAGCCAATTGTTaGTGCAACAGCAAAAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: PLPKVEFSESSELKKASCEKANC*CNSKNH Trigger: ATGGTTTTTGCTGTTGCACAAACAATTGGCTTTTTC...ACAGCTTGCCTTCTTTAGTTCTGAACTTTCTGAAAACTCTACTTTCGGCAGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR GCA 72 bp | GGGATTACAGATGGAGTTGAAAAAGCCAATTGTTTGTaGAACAGCAAAAACCATCTTGATTGTGACATCATC | + |
|
Preference number: 3 (lower is better) Translates to: GITDGVEKANCL*NSKNHLDCDII Trigger: GATGATGTCACAATCAAGATGGTTTTTGCTGTTGCACAAACAATTGGCTTTTTCAACTCCATCTGTAATCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATCTCTCTTTTGCATCATaGAAATCCCAGAATTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CQFQRLILQTFTAHYKLHLSFAS*KSQNFQ Trigger: CTGGAAATTCTGGGATTTCAATGATGCAAAAGAGAG...ATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGCCAAAACCACTGCTTTATTATGTACGAAGACTTTCAAAAATCTACTTTACAGCAAAAACCATCTaGATTGTGACATCATCATAC | + |
|
Preference number: 3 (lower is better) Translates to: LLPKPLLYYVRRLSKIYFTAKTI*IVTSSY Trigger: GTATGATGATGTCACAATCAAGATGGTTTTTGCTGT...AAAGTAGATTTTTGAAAGTCTTCGTACATAATAAAGCAGTGGTTTTGGCAGCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTGCTCACACAATTTGACATCAACGTTGGCATCGCTGAATAAGTCTCCTGCACCATCTTGCAGATaGAGGCACCACCCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PGCSHNLTSTLASLNKSPAPSCR*RHHPAT Trigger: AGTGGCTGGGTGGTGCCTTCATCTGCAAGATGGTGC...AGGAGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGAGCAGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGGCTGCTCACACAATTTGACATCAACGTTGGCATCGCTGAATAAGTCTCCGTCACAACAGCAGTaGACTGGACGAAGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGCSHNLTSTLASLNKSPSQQQ*TGRRAP Trigger: TGGTGCCCTTCGTCCAGTCCACTGCTGTTGTGACGG...AGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGAGCAGCCAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR CAA 72 bp | TTCTCCCCTGGCTGCTCACACAATTTGACATCAACGTaGGCATCGCTGAATAAGTCTCCTTTGGCTTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSPGCSHNLTST*ASLNKSPLASA Trigger: GGCGGAAGCCAAAGGAGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGAGCAGCCAGGGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS-3UTR TCA 90 bp | TGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACTACGTGCCACATGGGTaGTCCTACGATGATGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WHRCQFQRLILQTFTAHYYVPHG*SYDDGC Trigger: GCAGCCATCATCGTAGGATCACCCATGTGGCACGTA...GTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR TCA 90 bp | TGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAGGCAAGCTGTCGCTTaGGTTGCCTTTTCTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WHRCQFQRLILQTFTAHYRQAVA*VAFSPL Trigger: CAGGGGAGAAAAGGCAACTCAAGCGACAGCTTGCCT...GTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR GCA 90 bp | CCGAAAGTAGAGTTTTCAGAAAGTTCAGAACTAAAGAAGGCAAGCTGTCGCTTGCAGGGCAAAAATGAGTaGTCCAGCCAGCGCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKVEFSESSELKKASCRLQGKNE*SSQRKG Trigger: GCCTTTGCGCTGGCTGGAGCACTCATTTTTGCCCTG...CAAGCGACAGCTTGCCTTCTTTAGTTCTGAACTTTCTGAAAACTCTACTTTCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS-3UTR GCA 90 bp | ATTATGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACGGTGCGCATGGCCTTaGTGCGGGTCACCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: IMAQMSVPKADFTNVYSTRCAWP*CGSPHR Trigger: TCTATGTGGTGACCCGCAGCAAGGCCATGCGCACCG...TGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR GCA 90 bp | TGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACTCGAGGCGTTGTACGTaGCACATGGGTGATCCTACG | + |
|
Preference number: 4 (lower is better) Translates to: WHRCQFQRLILQTFTAHYSRRCT*HMGDPT Trigger: CGTAGGATCACCCATGTGGCACGTACAACGCCTCGA...GTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR CCA 90 bp | ACTGCCGAAAGTAGAGTTTTCAGAAAGTTCAGAACTAAAGAAGGCAAGCTGTCGAGATTCTCTGGTGCATaGGGCTGGCCCACTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAESRVFRKFRTKEGKLSRFSGA*GWPTLP Trigger: TGGAAGAGTGGGCCAGCCCCATGCACCAGAGAATCT...CGACAGCTTGCCTTCTTTAGTTCTGAACTTTCTGAAAACTCTACTTTCGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS-3UTR TCA 90 bp | ATTATGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACAGCACCATCTTGCAGATaGAGGCACCACCCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: IMAQMSVPKADFTNVYSTAPSCR*RHHPAT Trigger: AGTGGCTGGGTGGTGCCTTCATCTGCAAGATGGTGC...TGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATCGGTGCGCATGGCCTTaGTGCGGGTCACCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CQFQRLILQTFTAHYKLHRCAWP*CGSPHR Trigger: TCTATGTGGTGACCCGCAGCAAGGCCATGCGCACCG...ATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR GCA 90 bp | TGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACTCCTACGATGATGGCTaGCAACCAGACCACACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WHRCQFQRLILQTFTAHYSYDDG*QPDHTQ Trigger: TTGGGTGTGGTCTGGTTGGCAGCCATCATCGTAGGA...GTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR CCA 90 bp | ACTGCCGAAAGTAGAGTTTTCAGAAAGTTCAGAACTAAAGAAGGCAAGCTGTCGACAACAGCAGTGGACTaGACGAAGGGCACCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TAESRVFRKFRTKEGKLSTTAVD*TKGTIL Trigger: CAAGATGGTGCCCTTCGTCCAGTCCACTGCTGTTGT...CGACAGCTTGCCTTCTTTAGTTCTGAACTTTCTGAAAACTCTACTTTCGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| 3UTR CAA 72 bp | AAGTTCAGAACTAAAGAAGGCAAGCTGTCGCTTGAGTaGCCTTTTCTCCCCTGGCTGCTCACACAATTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KFRTKEGKLSLE*PFLPWLLTQFD Trigger: GTCAAATTGTGTGAGCAGCCAGGGGAGAAAAGGCAACTCAAGCGACAGCTTGCCTTCTTTAGTTCTGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS-3UTR GCA 90 bp | ATTATGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACAGGGCAAAAATGAGTaGTCCAGCCAGCGCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IMAQMSVPKADFTNVYSTQGKNE*SSQRKG Trigger: GCCTTTGCGCTGGCTGGAGCACTCATTTTTGCCCTG...TGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR TCA 90 bp | TGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTGTTCTGGAGCATCGTaGCGGGGATGCAGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQFQRLILQTFTAHYKLHCSGAS*RGCRRR Trigger: CCTTCTTCTGCATCCCCGTCACGATGCTCCAGAACA...ATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTCGAGGCGTTGTACGTaGCACATGGGTGATCCTACG | + |
|
Preference number: 4 (lower is better) Translates to: CQFQRLILQTFTAHYKLHSRRCT*HMGDPT Trigger: CGTAGGATCACCCATGTGGCACGTACAACGCCTCGA...ATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR GCA 90 bp | GGATATCATTACAGTTCATGTCCACTGCCGAAAGTAGAGTTTTCAGAAAGTTCAAACAACATGGAAAGGTaGCCAGCACGCAGCGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GYHYSSCPLPKVEFSESSNNMER*PARSEE Trigger: CTCTTCGCTGCGTGCTGGGCACCTTTCCATGTTGTT...TGAACTTTCTGAAAACTCTACTTTCGGCAGTGGACATGAACTGTAATGATATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCCAAAACCACTGCTTTATTATGTACGAAGACTTTCAAAAATCTACTTTCCGTCACAACAGCAGTaGACTGGACGAAGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPLLYYVRRLSKIYFPSQQQ*TGRRAP Trigger: TGGTGCCCTTCGTCCAGTCCACTGCTGTTGTGACGG...AAAGTAGATTTTTGAAAGTCTTCGTACATAATAAAGCAGTGGTTTTGGCAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR CCA 90 bp | ATTATGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACAGGATGGATGAGTCCTTaGTGCCTCTCAACAGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: IMAQMSVPKADFTNVYSTGWMSP*CLSTAM Trigger: CATCGCTGTTGAGAGGCACCAAGGACTCATCCATCC...TGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR CCA 90 bp | TGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATAGATTCTCTGGTGCATaGGGCTGGCCCACTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQFQRLILQTFTAHYKLHRFSGA*GWPTLP Trigger: TGGAAGAGTGGGCCAGCCCCATGCACCAGAGAATCT...ATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTGCCAAAACCACTGCTTTATTATGTACGAAGACTTTCAAAAATCTACTTTTGTTCTGGAGCATCGTaGCGGGGATGCAGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPLLYYVRRLSKIYFCSGAS*RGCRRR Trigger: CCTTCTTCTGCATCCCCGTCACGATGCTCCAGAACA...AAAGTAGATTTTTGAAAGTCTTCGTACATAATAAAGCAGTGGTTTTGGCAGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR TCA 90 bp | TGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACCTCCAACTCTCTTCTTaGTCCACAGTTCATAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WHRCQFQRLILQTFTAHYLQLSS*STVHSQ Trigger: TTGGCTATGAACTGTGGATCAAGAAGAGAGTTGGAG...GTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTATCCTACGATGATGGCTaGCAACCAGACCACACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVPKADFTNVYSTLQTTLSYDDG*QPDHTQ Trigger: TTGGGTGTGGTCTGGTTGGCAGCCATCATCGTAGGA...TAATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR GCA 90 bp | TCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTAAACAACATGGAAAGGTaGCCAGCACGCAGCGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVPKADFTNVYSTLQTTLNNMER*PARSEE Trigger: CTCTTCGCTGCGTGCTGGGCACCTTTCCATGTTGTT...TAATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR CCA 90 bp | TCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTAACAACAGCAGTGGACTaGACGAAGGGCACCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVPKADFTNVYSTLQTTLTTAVD*TKGTIL Trigger: CAAGATGGTGCCCTTCGTCCAGTCCACTGCTGTTGT...TAATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR TCA 90 bp | ATTATGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACAGATAGTCTGAAGTGCTaGACTGTCTCCAACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IMAQMSVPKADFTNVYSTDSLKC*TVSNSL Trigger: AAGAGAGTTGGAGACAGTTCAGCACTTCAGACTATC...TGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR GCA 90 bp | TGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACCTTCGGGTAGTGTACTaGCACTTCATTTTAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WHRCQFQRLILQTFTAHYLRVVY*HFILKG Trigger: TCCTTTTAAAATGAAGTGGCAGTACACTACCCGAAG...GTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR GCA 90 bp | GAGTTTTCAGAAAGTTCAGAACTAAAGAAGGCAAGCTGTCGCTTGAGTTGCCTTCTTCGGGTAGTGTACTaGCACTTCATTTTAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EFSESSELKKASCRLSCLLRVVY*HFILKG Trigger: TCCTTTTAAAATGAAGTGGCAGTACACTACCCGAAG...AAGGCAACTCAAGCGACAGCTTGCCTTCTTTAGTTCTGAACTTTCTGAAAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS-3UTR CCA 90 bp | TCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTATCCAGGCTTCTGTCCTaGGGAGAAGGTTTCTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SVPKADFTNVYSTLQTTLSRLLS*GEGFSY Trigger: GTAAGAGAAACCTTCTCCCCAGGACAGAAGCCTGGA...TAATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCCAAAACCACTGCTTTATTATGTACGAAGACTTTCAAAAATCTACTTTGAGCAGATCACTGAGTaGCAGAGAGCAGATGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPLLYYVRRLSKIYFEQITE*QRADED Trigger: ATCTTCATCTGCTCTCTGGCACTCAGTGATCTGCTC...AAAGTAGATTTTTGAAAGTCTTCGTACATAATAAAGCAGTGGTTTTGGCAGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR CCA 90 bp | ATTATGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACCCGCTTCTTCTTCCTaGCTATTTTGGACATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IMAQMSVPKADFTNVYSTPASSS*LFWTFL Trigger: AAGAAATGTCCAAAATAGCCAGGAAGAAGAAGCGGG...TGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTGCCAAAACCACTGCTTTATTATGTACGAAGACTTTCAAAAATCTACTTTTACTCAACCATCATGTaGACAACATGGAAAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPLLYYVRRLSKIYFYSTIM*TTWKGA Trigger: GGCACCTTTCCATGTTGTTCACATGATGGTTGAGTA...AAAGTAGATTTTTGAAAGTCTTCGTACATAATAAAGCAGTGGTTTTGGCAGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR GCA 90 bp | TGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAAGCCAATTGTTTGTaGAACAGCAAAAACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: WHRCQFQRLILQTFTAHYKANCL*NSKNHL Trigger: AAGATGGTTTTTGCTGTTGCACAAACAATTGGCTTT...GTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR GCA 90 bp | TGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAACTTTGCTCTCTTTTaGATCATTGAAATCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WHRCQFQRLILQTFTAHYNFALF*IIEIPE Trigger: TTCTGGGATTTCAATGATGCAAAAGAGAGCAAAGTT...GTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTACTTTTCTCCCCTGGCTaGTCACACAATTTGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: SVPKADFTNVYSTLQTTLLFSPG*SHNLTS Trigger: TGATGTCAAATTGTGTGAGCAGCCAGGGGAGAAAAG...TAATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCCAAAACCACTGCTTTATTATGTACGAAGACTTTCAAAAATCTACTTTTCTTCCTGGCTATTTTaGACATTTCTTTCCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPKPLLYYVRRLSKIYFSSWLF*TFLSRG Trigger: TCCACGGGAAAGAAATGTCCAAAATAGCCAGGAAGA...AAAGTAGATTTTTGAAAGTCTTCGTACATAATAAAGCAGTGGTTTTGGCAGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTAAGGTTTCTCTTACTATaGAATAACAAACCGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SVPKADFTNVYSTLQTTLRFLLL*NNKPQT Trigger: TGTCTGCGGTTTGTTATTGCATAGTAAGAGAAACCT...TAATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| 3UTR CAA 72 bp | TTCATAAATGCATACACAAAGGGATTACAGATGGAGTaGAAAAAGCCAATTGTTTGTGCAACAGCAAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: FINAYTKGLQME*KKPIVCATAKT Trigger: GGTTTTTGCTGTTGCACAAACAATTGGCTTTTTCAACTCCATCTGTAATCCCTTTGTGTATGCATTTATGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS TCA 90 bp | GCAGCTCCGGAGTGTAGACCAGCGGTCGCAGCCCATAGCGATGAATaGACTGTTCCCGAGTCAGGTTGTGCGCGCTCAGCAGCCGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AAPECRPAVAAHSDE*TVPESGCARSAAGK Trigger: TTTCCCGGCTGCTGAGCGCGCACAACCTGACTCGGGAACAGTTCATTCATCGCTATGGGCTGCGACCGCTGGTCTACACTCCGGAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS GCA 90 bp | ATAGATGACCAGAGAGTTGCCAAAGAGCGCCAGGGCAAAAATGAGTaGTCCAGCCAGCGCAAAGGCCAGTTTAGCGCGCGCGGGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IDDQRVAKERQGKNE*SSQRKGQFSARGQL Trigger: GAGCTGCCCGCGCGCGCTAAACTGGCCTTTGCGCTGGCTGGAGCACTCATTTTTGCCCTGGCGCTCTTTGGCAACTCTCTGGTCATCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS CCA 90 bp | GCGATGCAAGTCATGGTGAGGATTTCCGTCACAACAGCAGTGGACTaGACGAAGGGCACCATCTTGCAGATGAAGGCACCACCCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AMQVMVRISVTTAVD*TKGTILQMKAPPSH Trigger: GTGGCTGGGTGGTGCCTTCATCTGCAAGATGGTGCCCTTCGTCCAGTCCACTGCTGTTGTGACGGAAATCCTCACCATGACTTGCATCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS CCA 90 bp | ATCTTGCAGATGAAGGCACCACCCAGCCACTTGTCGGAGATGTTCTaGAGCATCGTGACGGGGATGCAGAAGAAGGCAATGAGCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: ILQMKAPPSHLSEMF*SIVTGMQKKAMSRS Trigger: TGATCTGCTCATTGCCTTCTTCTGCATCCCCGTCACGATGCTCCAGAACATCTCCGACAAGTGGCTGGGTGGTGCCTTCATCTGCAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTGCTCACACAATTTGACATCAACGTTGGCATCGCTGAATAAGTCTCCTGAGCAGATGAAGATGTaGGTGACGGTGCGCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGCSHNLTSTLASLNKSPEQMKM*VTVRMA Trigger: GGCCATGCGCACCGTCACCAACATCTTCATCTGCTC...AGGAGACTTATTCAGCGATGCCAACGTTGATGTCAAATTGTGTGAGCAGCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS TCA 90 bp | GAGGAAGTCATACTTAATCTCGAGGCGTTGTACGTGCCACATGGGTaGTCCTACGATGATGGCTGCCAACCAGACCACACCCAAGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: EEVILNLEALYVPHG*SYDDGCQPDHTQDC Trigger: ACAATCTTGGGTGTGGTCTGGTTGGCAGCCATCATCGTAGGATCACCCATGTGGCACGTACAACGCCTCGAGATTAAGTATGACTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR CAA 90 bp | GGACGCTGTGATCGTGATAACTTTGCTCTCTTTTGCATCATTGAAATCCCAGAAGCACCACCCAGCCACTaGTCGGAGATGTTCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRCDRDNFALFCIIEIPEAPPSH*SEMFWS Trigger: GCTCCAGAACATCTCCGACAAGTGGCTGGGTGGTGC...TTCTGGGATTTCAATGATGCAAAAGAGAGCAAAGTTATCACGATCACAGCGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197447.5 |
||
| CDS-3UTR CAA 90 bp | TGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACACGAAGGGCACCATCTaGCAGATGAAGGCACCACCC | + |
|
Preference number: 5 (lower is better) Translates to: WHRCQFQRLILQTFTAHYTKGTI*QMKAPP Trigger: GGGTGGTGCCTTCATCTGCAAGATGGTGCCCTTCGT...GTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS GCA 90 bp | TTCAAAGTTACTGTACTCAACCATCATGTGAACAACATGGAAAGGTaGCCAGCACGCAGCGAAGAGAGCCACCACTGTCACCATCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: FKVTVLNHHVNNMER*PARSEESHHCHHHN Trigger: GTTATGATGGTGACAGTGGTGGCTCTCTTCGCTGCGTGCTGGGCACCTTTCCATGTTGTTCACATGATGGTTGAGTACAGTAACTTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR CAA 90 bp | ATTATGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACAGCACCACCCAGCCACTaGTCGGAGATGTTCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IMAQMSVPKADFTNVYSTAPPSH*SEMFWS Trigger: GCTCCAGAACATCTCCGACAAGTGGCTGGGTGGTGC...TGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS TCA 90 bp | ACATCATCATACTCTTTTTCAAAGTTACTGTACTCAACCATCATGTaGACAACATGGAAAGGTGCCCAGCACGCAGCGAAGAGAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TSSYSFSKLLYSTIM*TTWKGAQHAAKRAT Trigger: GGTGGCTCTCTTCGCTGCGTGCTGGGCACCTTTCCATGTTGTTCACATGATGGTTGAGTACAGTAACTTTGAAAAAGAGTATGATGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTAGAGCAGATGAAGATGTaGGTGACGGTGCGCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVPKADFTNVYSTLQTTLEQMKM*VTVRMA Trigger: GGCCATGCGCACCGTCACCAACATCTTCATCTGCTC...TAATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS-3UTR CAA 90 bp | TCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACACTACAAACTACATTAAAGCTGTCGCTTGAGTaGCCTTTTCTCCCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVPKADFTNVYSTLQTTLKLSLE*PFLPWL Trigger: CAGCCAGGGGAGAAAAGGCAACTCAAGCGACAGCTT...TAATGTAGTTTGTAGTGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTGCCAAAACCACTGCTTTATTATGTACGAAGACTTTCAAAAATCTACTTTTTCTTCCTGGCTATTTaGGACATTTCTTTCCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPKPLLYYVRRLSKIYFFFLAI*DISFPW Trigger: CCACGGGAAAGAAATGTCCAAAATAGCCAGGAAGAA...AAAGTAGATTTTTGAAAGTCTTCGTACATAATAAAGCAGTGGTTTTGGCAGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR CAA 90 bp | ATTATGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACAACAGCAAAAACCATCTaGATTGTGACATCATCATAC | + |
|
Preference number: 5 (lower is better) Translates to: IMAQMSVPKADFTNVYSTTAKTI*IVTSSY Trigger: GTATGATGATGTCACAATCAAGATGGTTTTTGCTGT...TGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR CAA 90 bp | ATTATGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACAGAAAAAGCCAATTGTTaGTGCAACAGCAAAAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: IMAQMSVPKADFTNVYSTEKANC*CNSKNH Trigger: ATGGTTTTTGCTGTTGCACAAACAATTGGCTTTTTC...TGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS-3UTR CAA 90 bp | ATTATGGCACAGATGTCAGTTCCAAAGGCTGATTTTACAAACGTTTACAGCACAGGATTACAGATGGAGTaGAAAAAGCCAATTGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: IMAQMSVPKADFTNVYSTGLQME*KKPIVC Trigger: ACAAACAATTGGCTTTTTCAACTCCATCTGTAATCC...TGTGCTGTAAACGTTTGTAAAATCAGCCTTTGGAACTGACATCTGTGCCATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS GCA 72 bp | CAGAGAGTTGCCAAAGAGCGCCAGGGCAAAAATGAGTaGTCCAGCCAGCGCAAAGGCCAGTTTAGCGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QRVAKERQGKNE*SSQRKGQFSAR Trigger: GCGCGCGCTAAACTGGCCTTTGCGCTGGCTGGAGCACTCATTTTTGCCCTGGCGCTCTTTGGCAACTCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS TCA 72 bp | GAGTGTAGACCAGCGGTCGCAGCCCATAGCGATGAATaGACTGTTCCCGAGTCAGGTTGTGCGCGCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ECRPAVAAHSDE*TVPESGCARSA Trigger: TGCTGAGCGCGCACAACCTGACTCGGGAACAGTTCATTCATCGCTATGGGCTGCGACCGCTGGTCTACACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS CAA 72 bp | AGCAGATCACTGAGTGCCAGAGAGCAGATGAAGATGTaGGTGACGGTGCGCATGGCCTTGCTGCGGGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SRSLSAREQMKM*VTVRMALLRVT Trigger: GGTGACCCGCAGCAAGGCCATGCGCACCGTCACCAACATCTTCATCTGCTCTCTGGCACTCAGTGATCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS CAA 72 bp | GGCACCATCTTGCAGATGAAGGCACCACCCAGCCACTaGTCGGAGATGTTCTGGAGCATCGTGACGGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GTILQMKAPPSH*SEMFWSIVTGM Trigger: CATCCCCGTCACGATGCTCCAGAACATCTCCGACAAGTGGCTGGGTGGTGCCTTCATCTGCAAGATGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS CCA 72 bp | ATGAAGGCACCACCCAGCCACTTGTCGGAGATGTTCTaGAGCATCGTGACGGGGATGCAGAAGAAGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: MKAPPSHLSEMF*SIVTGMQKKAM Trigger: CATTGCCTTCTTCTGCATCCCCGTCACGATGCTCCAGAACATCTCCGACAAGTGGCTGGGTGGTGCCTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS TCA 72 bp | GTCCTTGGTGCCTCTCAACAGCGATGCAAGTCATGGTaGGGATTTCCGTCACAACAGCAGTGGACTGGACGA | + |
|
Preference number: 6 (lower is better) Translates to: VLGASQQRCKSW*GFPSQQQWTGR Trigger: TCGTCCAGTCCACTGCTGTTGTGACGGAAATCCTCACCATGACTTGCATCGCTGTTGAGAGGCACCAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS CCA 72 bp | GTCATGGTGAGGATTTCCGTCACAACAGCAGTGGACTaGACGAAGGGCACCATCTTGCAGATGAAGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: VMVRISVTTAVD*TKGTILQMKAP Trigger: TGGTGCCTTCATCTGCAAGATGGTGCCCTTCGTCCAGTCCACTGCTGTTGTGACGGAAATCCTCACCATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS TCA 72 bp | ATACTTAATCTCGAGGCGTTGTACGTGCCACATGGGTaGTCCTACGATGATGGCTGCCAACCAGACCACACC | + |
|
Preference number: 6 (lower is better) Translates to: ILNLEALYVPHG*SYDDGCQPDHT Trigger: GGTGTGGTCTGGTTGGCAGCCATCATCGTAGGATCACCCATGTGGCACGTACAACGCCTCGAGATTAAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091227.9 ENSMUST00000197447.5 |
||
| CDS GCA 72 bp | ACTGTACTCAACCATCATGTGAACAACATGGAAAGGTaGCCAGCACGCAGCGAAGAGAGCCACCACTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TVLNHHVNNMER*PARSEESHHCH Trigger: GTGACAGTGGTGGCTCTCTTCGCTGCGTGCTGGGCACCTTTCCATGTTGTTCACATGATGGTTGAGTACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||
| CDS TCA 72 bp | TACTCTTTTTCAAAGTTACTGTACTCAACCATCATGTaGACAACATGGAAAGGTGCCCAGCACGCAGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YSFSKLLYSTIM*TTWKGAQHAAK Trigger: CTTCGCTGCGTGCTGGGCACCTTTCCATGTTGTTCACATGATGGTTGAGTACAGTAACTTTGAAAAAGAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091227.9 |
||